Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0006872

Physical Location & Seq

Genomic Coordinates Reverse (-)

7395357 .. 7398647

Gene Structure 3291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g05880.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGAAGAAAAACGCCGCGACGCTGCCGGAACTCAGCCGCCGTCAAATGCCGACTCCCCAACCGCCGAGCCGTCTTCTACTCGGCGTCGTGGCGGAGCCCAAAAGCGAAAGGCAAGCACCCTTGGCGGCTCAACCTCTTCATCCACGCCATCCAAACGTTTCGCTCGCGAGAAAGCTTTGCTTTCTCACACTTCGATCCACAACGGCCCGTTGACCCGGGCCCGTCAGGGCCCTAGCAGCCTCGCTTCGGCTTCATCAGATGGGGCTGCTGCGAAGCCGGCGGCGCAAGCCAAGCGGCCTGACCTGGTGGGGGAGGCGGTGGCTGAGCTGGTGAAACGGGAGAGCGATTTGGAGGCTCTGGAGGCTTCTATGGAGGCTGGGTTTGAATCCATTAGATCTCGCAGTGCCAATGCTCATGTTGTTCCTAGTCATTGCGGTTGGTTTTCTTGGACAAAGGTTCACTCCATTGAGGAGCAAATGTTGCCGTCTTTCTTTAATGGGAAGTCTGTGACTCGGACTCCTGACGTATACTTGAAGATACGTAATTGCATCATGAAGAAATTCCACGCAAATCCAGGCACATTTATTGAATTAAAGGACTTGTTGGAGCTTGAAGTTGGAGAATTTGATGCTAGACAAGAAGTAATGGAATTTTTGGACCACTGGGGTTTGATTAATTTCCACCCATTCCCACCAACAGGTTCTGCTGTGGCCAGTGTCAACGGTGATGGAGTGGCAGAAAAAGATGCTTTGGTTGATAAGTTGTATCACTTTAAAGCATTACAATCACGCTCATCAGTTGTTCCCAAGACTAATATAACGACCCCAACAGTGCTATCTGGGTTGTTTCCCGAGTCTGCAATTGCTGAAGAGTTGGTTAGGCCTGAAGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAGCGCTACCATTGCCAGAAGCAGGCAGATTTTGATCGATCCACTGATTGCTTTAATAATGGGAAATTCGACTCTGGCATGTCTTCGTCAGATTTCATTCTTATGGAGCCTGCTGAAGTTCCGGGTGTAAGTAGTGGGAACTGGACTGATCAGGAGACTCTCCTTCTCCTTGAAGCATTAGAACTTTATAAAGAAAACTGGAATGAGATTGCTGAACATGTCGCAACAAAAACAAAAGCTCAATGTATACTGCACTTTGTTCAAATGCCAATTGTGGACACTTTTCTTGATTATGACGATAGTTTTGATGGTAGTGCTAAAGAGACTGCATGTCCAACTTCAACTGGAAATGATTTATCGGTCCCCAAAGGTGCCCCTGAAGCAACAGAGAATAAGACTGCTGTTAATGCGAGTGACCCCCAAACTTTCCCGATTAAAACTTCAAAAGAAGTGACTGAAGTAATCGTTGGACAGGATACTTCAAAGCCAGAAGATTTAAATGAAGTCAAAGACGGTCAGGAAACTTCAAAATTGGAAGATACCGGTGAATTGAGAGTTGATCAAGAAACAGATGAGAATTTTGCACTAAAGGCTCTTAAAGAAGCATTCGAAGTTGTTGGTTATCCTCCAACACCTGAAGGTCAACTTTCATTTACAGAAGTGGGAAACCCTGCCATGGCATTGGCAGCATTCCTAGCACGTTTGGTGGGACCTGATGCTGCTATTGCTCAGCACATAATTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04714 ko05225 map04714 map05225

Pfam Domains

Protein Families

Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

562

Amino Acids

60.92

Weight (kDa)

5.1

Isoelectric Point (pI)

45.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34430 AT4G34430 AT4G34430 AT4G34430
fragaria_vesca	FvH4_2g08620 FvH4_2g08620
malus_domestica	MD05G1067900.v1.1 MD10G1077800.v1.1
prunus_persica	Prupe.8G098500_v2.0.a1
pyrus_communis	pycom05g05880 pycom10g06070
rosa_chinensis	RchiOBHm_Chr6g0263951
rosa_laevigata	RLG00000014300
rosa_multiflora	Rmu_co8374983.1_g000001 Rmu_sc0002112.1_g000023 Rmu_sc0034069.1_g000004
rosa_roxburghii	Rroxscaffold_176G00431340 Rroxscaffold_7G00203710
rosa_rugosa	Rorug06G0007000 Rorug06G0007000 Rorug06G0007000
rosa_samantha	Rh6AG127900 Rh6BG123700 Rh6CG122400 Rh6DG109600
rosa_wichuraiana	Rw6G011040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1128
AccB1I	GGYRCC	1 cut(s)	1310
AccI	GTMKAC	2 cut(s)	528, 1186
AccII	CGCG	2 cut(s)	18, 168
AciI	CCGC	9 cut(s)	16, 38, 63, 93, 126, 281, 295, 317, 435
AclI	AACGTT	1 cut(s)	157
AclWI	GGATC	2 cut(s)	190, 972
AcoI	YGGCCR	1 cut(s)	711
AcsI	RAATTY	5 cut(s)	560, 623, 650, 1004, 1516
AcuI	CTGAAG	6 cut(s)	888, 906, 1074, 1338, 1416, 1596
AcyI	GRCGYC	1 cut(s)	85
AfaI	GTAC	1 cut(s)	905
AfeI	AGCGCT	1 cut(s)	944
AfiI	CCNNNNNNNGG	5 cut(s)	247, 310, 698, 961, 1615
AflIII	ACRYGT	1 cut(s)	1156
AgeI	ACCGGT	1 cut(s)	1481
AhdI	GACNNNNNGTC	1 cut(s)	1269
AjnI	CCWGG	2 cut(s)	303, 574
AjuI	GAANNNNNNNTTGG	2 cut(s)	1389, 1421
AluBI	AGCT	6 cut(s)	176, 328, 610, 896, 926, 1178
AluI	AGCT	6 cut(s)	176, 328, 610, 896, 926, 1178
Alw26I	GTCTC	2 cut(s)	1088, 1256
AlwI	GGATC	2 cut(s)	190, 972
AlwNI	CAGNNNCTG	1 cut(s)	704
Ama87I	CYCGRG	2 cut(s)	216, 851
Aor51HI	AGCGCT	1 cut(s)	944
AoxI	GGCC	7 cut(s)	205, 219, 229, 296, 711, 881, 890
ApaI	GGGCCC	2 cut(s)	223, 233
ApeKI	GCWGC	6 cut(s)	23, 237, 266, 269, 1625, 1658
ApoI	RAATTY	5 cut(s)	560, 623, 650, 1004, 1516
ArsI	GACNNNNNNTTYG	2 cut(s)	1226, 1258
AseI	ATTAAT	1 cut(s)	675
AsiGI	ACCGGT	1 cut(s)	1481
Asp700I	GAANNNNTTC	1 cut(s)	560
AspLEI	GCGC	2 cut(s)	286, 945
AspS9I	GGNCC	9 cut(s)	206, 219, 220, 229, 230, 658, 890, 1300, 1649
AsuC2I	CCSGG	3 cut(s)	217, 218, 1062
AsuHPI	GGTGA	3 cut(s)	343, 737, 1496
AsuII	TTCGAA	1 cut(s)	1548
AvaI	CYCGRG	2 cut(s)	216, 851
AvaII	GGWCC	3 cut(s)	658, 1300, 1649
BaeGI	GKGCMC	3 cut(s)	223, 233, 1315
BalI	TGGCCA	1 cut(s)	713
BanI	GGYRCC	1 cut(s)	1310
BanII	GRGCYC	3 cut(s)	100, 223, 233
BbsI	GAAGAC	2 cut(s)	66, 1014
BbvI	GCAGC	6 cut(s)	10, 249, 253, 256, 1637, 1645
BccI	CCATC	4 cut(s)	157, 254, 722, 1241
BceAI	ACGGC	4 cut(s)	25, 55, 220, 469
BciT130I	CCWGG	2 cut(s)	305, 576
BciVI	GTATCC	1 cut(s)	1408
BclI	TGATCA	2 cut(s)	1087, 1498
BcnI	CCSGG	3 cut(s)	217, 218, 1062
BcoDI	GTCTC	2 cut(s)	1088, 1256
BfaI	CTAG	4 cut(s)	234, 426, 633, 1634
BfoI	RGCGCY	1 cut(s)	946
BfuI	GTATCC	1 cut(s)	1408
BglI	GCCNNNNNGGC	1 cut(s)	889
BglII	AGATCT	1 cut(s)	395
BlpI	GCTNAGC	2 cut(s)	324, 1668
Bme1390I	CCNGG	5 cut(s)	217, 218, 305, 576, 1062
Bme18I	GGWCC	3 cut(s)	658, 1300, 1649
BmeRI	GACNNNNNGTC	1 cut(s)	1269
BmeT110I	CYCGRG	2 cut(s)	216, 851
BmgT120I	GGNCC	9 cut(s)	206, 219, 220, 229, 230, 658, 890, 1300, 1649
BmiI	GGNNCC	7 cut(s)	97, 221, 231, 1047, 1302, 1312, 1650
BmrFI	CCNGG	5 cut(s)	217, 218, 305, 576, 1062
BmrI	ACTGGG	1 cut(s)	673
BmsI	GCATC	4 cut(s)	558, 619, 736, 1645
BmuI	ACTGGG	1 cut(s)	673
BpiI	GAAGAC	2 cut(s)	66, 1014
BpmI	CTGGAG	1 cut(s)	380
Bpu1102I	GCTNAGC	2 cut(s)	324, 1668
Bpu14I	TTCGAA	1 cut(s)	1548
BpuMI	CCSGG	3 cut(s)	217, 218, 1062
Bsa29I	ATCGAT	1 cut(s)	976
BsaAI	YACGTR	1 cut(s)	542
BsaBI	GATNNNNATC	1 cut(s)	972
BsaHI	GRCGYC	1 cut(s)	85
BsaJI	CCNNGG	3 cut(s)	121, 216, 1614
BsaWI	WCCGGW	1 cut(s)	1481
BsaXI	ACNNNNNCTCC	6 cut(s)	365, 395, 464, 494, 502, 532
Bsc4I	CCNNNNNNNGG	5 cut(s)	247, 310, 698, 961, 1615
Bse118I	RCCGGY	2 cut(s)	277, 1481
Bse1I	ACTGG	5 cut(s)	668, 714, 1085, 1142, 1288
Bse3DI	GCAATG	3 cut(s)	430, 907, 949
Bse8I	GATNNNNATC	1 cut(s)	972
BseBI	CCWGG	2 cut(s)	305, 576
BseCI	ATCGAT	1 cut(s)	976
BseDI	CCNNGG	3 cut(s)	121, 216, 1614
BseGI	GGATG	2 cut(s)	140, 149
BseJI	GATNNNNATC	1 cut(s)	972
BseLI	CCNNNNNNNGG	5 cut(s)	247, 310, 698, 961, 1615
BseMI	GCAATG	3 cut(s)	430, 907, 949
BseMII	CTCAG	3 cut(s)	47, 315, 1682
BseNI	ACTGG	5 cut(s)	668, 714, 1085, 1142, 1288
BseRI	GAGGAG	1 cut(s)	485
BseSI	GKGCMC	3 cut(s)	223, 233, 1315
BseXI	GCAGC	6 cut(s)	10, 249, 253, 256, 1637, 1645
BseYI	CCCAGC	1 cut(s)	377
BsgI	GTGCAG	1 cut(s)	1175
Bsh1236I	CGCG	2 cut(s)	18, 168
BshFI	GGCC	7 cut(s)	207, 221, 231, 298, 713, 883, 892
BshNI	GGYRCC	1 cut(s)	1310
BshTI	ACCGGT	1 cut(s)	1481
BshVI	ATCGAT	1 cut(s)	976
BsiHKCI	CYCGRG	2 cut(s)	216, 851
BsiSI	CCGG	5 cut(s)	27, 217, 278, 1061, 1482
BslFI	GGGAC	2 cut(s)	1286, 1662
BslI	CCNNNNNNNGG	5 cut(s)	247, 310, 698, 961, 1615
BsmAI	GTCTC	2 cut(s)	1088, 1256
BsmFI	GGGAC	2 cut(s)	1286, 1662
BsmI	GAATGC	2 cut(s)	1544, 1628
BsnI	GGCC	7 cut(s)	207, 221, 231, 298, 713, 883, 892
BsoBI	CYCGRG	2 cut(s)	216, 851
Bsp119I	TTCGAA	1 cut(s)	1548
Bsp120I	GGGCCC	2 cut(s)	219, 229
Bsp1286I	GDGCHC	4 cut(s)	100, 223, 233, 1315
Bsp143I	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
Bsp1720I	GCTNAGC	2 cut(s)	324, 1668
Bsp19I	CCATGG	1 cut(s)	1614
Bsp68I	TCGCGA	1 cut(s)	168
BspACI	CCGC	9 cut(s)	16, 38, 63, 93, 126, 281, 295, 317, 435
BspANI	GGCC	7 cut(s)	207, 221, 231, 298, 713, 883, 892
BspCNI	CTCAG	3 cut(s)	46, 316, 1681
BspDI	ATCGAT	1 cut(s)	976
BspFNI	CGCG	2 cut(s)	18, 168
BspHI	TCATGA	1 cut(s)	552
BspLI	GGNNCC	7 cut(s)	97, 221, 231, 1047, 1302, 1312, 1650
BspPI	GGATC	2 cut(s)	190, 972
BspT104I	TTCGAA	1 cut(s)	1548
BspT107I	GGYRCC	1 cut(s)	1310
BsrDI	GCAATG	3 cut(s)	430, 907, 949
BsrFI	RCCGGY	2 cut(s)	277, 1481
BsrI	ACTGG	5 cut(s)	668, 714, 1085, 1142, 1288
BssAI	RCCGGY	2 cut(s)	277, 1481
BssECI	CCNNGG	3 cut(s)	121, 216, 1614
BssMI	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
BssNAI	GTATAC	2 cut(s)	529, 1187
BssNI	GRCGYC	1 cut(s)	85
BssT1I	CCWWGG	2 cut(s)	121, 1614
Bst1107I	GTATAC	2 cut(s)	529, 1187
Bst2UI	CCWGG	2 cut(s)	305, 576
Bst4CI	ACNGT	3 cut(s)	725, 832, 1454
Bst6I	CTCTTC	2 cut(s)	142, 864
BstACI	GRCGYC	1 cut(s)	85
BstAPI	GCANNNNNTGC	1 cut(s)	481
BstBAI	YACGTR	1 cut(s)	542
BstBI	TTCGAA	1 cut(s)	1548
BstC8I	GCNNGC	8 cut(s)	115, 166, 279, 288, 894, 941, 963, 1050
BstDEI	CTNAG	3 cut(s)	33, 324, 1668
BstDSI	CCRYGG	1 cut(s)	1614
BstF5I	GGATG	2 cut(s)	140, 149
BstFNI	CGCG	2 cut(s)	18, 168
BstH2I	RGCGCY	1 cut(s)	946
BstHHI	GCGC	2 cut(s)	286, 945
BstKTI	GATC	6 cut(s)	198, 398, 976, 980, 1090, 1501
BstMAI	GTCTC	2 cut(s)	1088, 1256
BstMBI	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
BstNI	CCWGG	2 cut(s)	305, 576
BstNSI	RCATGY	3 cut(s)	1021, 1160, 1272
BstSCI	CCNGG	5 cut(s)	215, 216, 303, 574, 1060
BstSLI	GKGCMC	3 cut(s)	223, 233, 1315
BstSNI	TACGTA	1 cut(s)	542
BstUI	CGCG	2 cut(s)	18, 168
BstV1I	GCAGC	6 cut(s)	10, 249, 253, 256, 1637, 1645
BstV2I	GAAGAC	2 cut(s)	66, 1014
BstX2I	RGATCY	1 cut(s)	395
BstXI	CCANNNNNNTGG	1 cut(s)	1621
BstYI	RGATCY	1 cut(s)	395
BstZ17I	GTATAC	2 cut(s)	529, 1187
Bsu15I	ATCGAT	1 cut(s)	976
BsuI	GTATCC	1 cut(s)	1408
BsuRI	GGCC	7 cut(s)	207, 221, 231, 298, 713, 883, 892
BsuTUI	ATCGAT	1 cut(s)	976
BtgI	CCRYGG	1 cut(s)	1614
BtsCI	GGATG	2 cut(s)	140, 149
BtsI	GCAGTG	1 cut(s)	409
BtsIMutI	CAGTG	5 cut(s)	409, 661, 721, 837, 981
BtuMI	TCGCGA	1 cut(s)	168
Cac8I	GCNNGC	8 cut(s)	115, 166, 279, 288, 894, 941, 963, 1050
CaiI	CAGNNNCTG	1 cut(s)	704
CciI	TCATGA	1 cut(s)	552
CfoI	GCGC	2 cut(s)	286, 945
Cfr10I	RCCGGY	2 cut(s)	277, 1481
Cfr13I	GGNCC	9 cut(s)	206, 219, 220, 229, 230, 658, 890, 1300, 1649
Cfr9I	CCCGGG	1 cut(s)	216
ClaI	ATCGAT	1 cut(s)	976
CseI	GACGC	2 cut(s)	29, 74
CsiI	ACCWGGT	1 cut(s)	303
Csp6I	GTAC	1 cut(s)	904
CspAI	ACCGGT	1 cut(s)	1481
CviAII	CATG	6 cut(s)	416, 553, 1018, 1157, 1269, 1615
CviQI	GTAC	1 cut(s)	904
DdeI	CTNAG	3 cut(s)	33, 324, 1668
DpnI	GATC	6 cut(s)	197, 397, 975, 979, 1089, 1500
DpnII	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
DraI	TTTAAA	2 cut(s)	775, 1437
DriI	GACNNNNNGTC	1 cut(s)	1269
EaeI	YGGCCR	1 cut(s)	711
Eam1104I	CTCTTC	2 cut(s)	142, 864
Eam1105I	GACNNNNNGTC	1 cut(s)	1269
EarI	CTCTTC	2 cut(s)	142, 864
EciI	GGCGGA	1 cut(s)	108
Eco105I	TACGTA	1 cut(s)	542
Eco130I	CCWWGG	2 cut(s)	121, 1614
Eco147I	AGGCCT	1 cut(s)	883
Eco24I	GRGCYC	3 cut(s)	100, 223, 233
Eco47I	GGWCC	3 cut(s)	658, 1300, 1649
Eco47III	AGCGCT	1 cut(s)	944
Eco57I	CTGAAG	6 cut(s)	888, 906, 1074, 1338, 1416, 1596
Eco88I	CYCGRG	2 cut(s)	216, 851
EcoO109I	RGGNCCY	3 cut(s)	229, 230, 1649
EcoRII	CCWGG	2 cut(s)	303, 574
EcoT14I	CCWWGG	2 cut(s)	121, 1614
EcoT38I	GRGCYC	3 cut(s)	100, 223, 233
ErhI	CCWWGG	2 cut(s)	121, 1614
FaeI	CATG	6 cut(s)	419, 556, 1021, 1160, 1272, 1618
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 1569, 1601
FaqI	GGGAC	2 cut(s)	1286, 1662
FatI	CATG	6 cut(s)	415, 552, 1017, 1156, 1268, 1614
FbaI	TGATCA	2 cut(s)	1087, 1498
FblI	GTMKAC	2 cut(s)	528, 1186
FokI	GGATG	2 cut(s)	127, 136
FriOI	GRGCYC	3 cut(s)	100, 223, 233
FspBI	CTAG	4 cut(s)	234, 426, 633, 1634
GlaI	GCGC	2 cut(s)	285, 944
GsaI	CCCAGC	1 cut(s)	381
GsuI	CTGGAG	1 cut(s)	380
HaeII	RGCGCY	1 cut(s)	946
HaeIII	GGCC	7 cut(s)	207, 221, 231, 298, 713, 883, 892
HapII	CCGG	5 cut(s)	27, 217, 278, 1061, 1482
HgaI	GACGC	2 cut(s)	29, 74
HhaI	GCGC	2 cut(s)	286, 945
Hin1I	GRCGYC	1 cut(s)	85
Hin1II	CATG	6 cut(s)	419, 556, 1021, 1160, 1272, 1618
Hin6I	GCGC	2 cut(s)	284, 943
HinP1I	GCGC	2 cut(s)	284, 943
HincII	GTYRAC	3 cut(s)	213, 721, 1583
HindII	GTYRAC	3 cut(s)	213, 721, 1583
HindIII	AAGCTT	1 cut(s)	174
HinfI	GANTC	7 cut(s)	53, 386, 511, 517, 854, 1010, 1096
HpaII	CCGG	5 cut(s)	27, 217, 278, 1061, 1482
HphI	GGTGA	3 cut(s)	343, 737, 1496
Hpy166II	GTNNAC	7 cut(s)	213, 460, 529, 721, 1187, 1216, 1583
Hpy188I	TCNGA	3 cut(s)	259, 516, 1030
Hpy8I	GTNNAC	7 cut(s)	213, 460, 529, 721, 1187, 1216, 1583
Hpy99I	CGWCG	2 cut(s)	23, 90
HpyAV	CCTTC	3 cut(s)	881, 1112, 1571
HpyCH4III	ACNGT	3 cut(s)	725, 832, 1454
HpyCH4IV	ACGT	4 cut(s)	157, 525, 541, 1639
HpyCH4V	TGCA	6 cut(s)	549, 860, 912, 1192, 1268, 1523
HpyF3I	CTNAG	3 cut(s)	33, 324, 1668
HpySE526I	ACGT	4 cut(s)	157, 525, 541, 1639
Hsp92I	GRCGYC	1 cut(s)	85
Hsp92II	CATG	6 cut(s)	419, 556, 1021, 1160, 1272, 1618
HspAI	GCGC	2 cut(s)	284, 943
KroI	GCCGGC	1 cut(s)	277
KroNI	GCCGGC	1 cut(s)	279
Ksp22I	TGATCA	2 cut(s)	1087, 1498
Kzo9I	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
LmnI	GCTCC	4 cut(s)	95, 472, 607, 1045
Lsp1109I	GCAGC	6 cut(s)	10, 249, 253, 256, 1637, 1645
LweI	GCATC	4 cut(s)	558, 619, 736, 1645
MabI	ACCWGGT	1 cut(s)	303
MaeI	CTAG	4 cut(s)	234, 426, 633, 1634
MaeII	ACGT	4 cut(s)	157, 525, 541, 1639
MaeIII	GTNAC	3 cut(s)	508, 1352, 1390
MalI	GATC	6 cut(s)	197, 397, 975, 979, 1089, 1500
MboI	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
MboII	GAAGA	9 cut(s)	17, 66, 129, 547, 568, 881, 1014, 1442, 1487
MfeI	CAATTG	2 cut(s)	861, 1209
MflI	RGATCY	1 cut(s)	395
MhlI	GDGCHC	4 cut(s)	100, 223, 233, 1315
MlsI	TGGCCA	1 cut(s)	713
MluNI	TGGCCA	1 cut(s)	713
MlyI	GAGTC	6 cut(s)	47, 505, 511, 863, 1004, 1090
MmeI	TCCRAC	5 cut(s)	585, 598, 1298, 1387, 1592
MnlI	CCTC	8 cut(s)	145, 251, 307, 346, 355, 367, 463, 1575
Mox20I	TGGCCA	1 cut(s)	713
MroNI	GCCGGC	1 cut(s)	277
MroXI	GAANNNNTTC	1 cut(s)	560
MscI	TGGCCA	1 cut(s)	713
MseI	TTAA	9 cut(s)	495, 593, 675, 774, 993, 1344, 1374, 1436, 1536
MslI	CAYNNNNRTG	1 cut(s)	1040
Msp20I	TGGCCA	1 cut(s)	713
MspA1I	CMGCKG	2 cut(s)	896, 926
MspI	CCGG	5 cut(s)	27, 217, 278, 1061, 1482
MspR9I	CCNGG	5 cut(s)	217, 218, 305, 576, 1062
MunI	CAATTG	2 cut(s)	861, 1209
Mva1269I	GAATGC	2 cut(s)	1544, 1628
MvaI	CCWGG	2 cut(s)	305, 576
MvnI	CGCG	2 cut(s)	18, 168
NaeI	GCCGGC	1 cut(s)	279
NciI	CCSGG	3 cut(s)	217, 218, 1062
NcoI	CCATGG	1 cut(s)	1614
NdeII	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
NgoMIV	GCCGGC	1 cut(s)	277
NlaIII	CATG	6 cut(s)	419, 556, 1021, 1160, 1272, 1618
NlaIV	GGNNCC	7 cut(s)	97, 221, 231, 1047, 1302, 1312, 1650
NmeAIII	GCCGAG	2 cut(s)	61, 91
NmuCI	GTSAC	3 cut(s)	508, 1352, 1390
NruI	TCGCGA	1 cut(s)	168
NspI	RCATGY	3 cut(s)	1021, 1160, 1272
NspV	TTCGAA	1 cut(s)	1548
PagI	TCATGA	1 cut(s)	552
PceI	AGGCCT	1 cut(s)	883
PciI	ACATGT	1 cut(s)	1156
PctI	GAATGC	2 cut(s)	1544, 1628
PdiI	GCCGGC	1 cut(s)	279
PdmI	GAANNNNTTC	1 cut(s)	560
PfeI	GAWTC	1 cut(s)	386
PinAI	ACCGGT	1 cut(s)	1481
PleI	GAGTC	6 cut(s)	47, 505, 511, 862, 1004, 1090
PpsI	GAGTC	6 cut(s)	47, 505, 511, 862, 1004, 1090
Ppu21I	YACGTR	1 cut(s)	542
PpuMI	RGGWCCY	1 cut(s)	1649
PscI	ACATGT	1 cut(s)	1156
PshBI	ATTAAT	1 cut(s)	675
PsiI	TTATAA	1 cut(s)	1128
Psp1406I	AACGTT	1 cut(s)	157
Psp5II	RGGWCCY	1 cut(s)	1649
Psp6I	CCWGG	2 cut(s)	303, 574
PspFI	CCCAGC	1 cut(s)	377
PspGI	CCWGG	2 cut(s)	303, 574
PspN4I	GGNNCC	7 cut(s)	97, 221, 231, 1047, 1302, 1312, 1650
PspOMI	GGGCCC	2 cut(s)	219, 229
PspPI	GGNCC	9 cut(s)	206, 219, 220, 229, 230, 658, 890, 1300, 1649
PspPPI	RGGWCCY	1 cut(s)	1649
PstNI	CAGNNNCTG	1 cut(s)	704
PsuI	RGATCY	1 cut(s)	395
PvuII	CAGCTG	2 cut(s)	896, 926
RruI	TCGCGA	1 cut(s)	168
RsaI	GTAC	1 cut(s)	905
RsaNI	GTAC	1 cut(s)	904
RseI	CAYNNNNRTG	1 cut(s)	1040
SaqAI	TTAA	9 cut(s)	495, 593, 675, 774, 993, 1344, 1374, 1436, 1536
Sau3AI	GATC	6 cut(s)	195, 395, 973, 977, 1087, 1498
Sau96I	GGNCC	9 cut(s)	206, 219, 220, 229, 230, 658, 890, 1300, 1649
SchI	GAGTC	6 cut(s)	47, 505, 511, 863, 1004, 1090
ScrFI	CCNGG	5 cut(s)	217, 218, 305, 576, 1062
SduI	GDGCHC	4 cut(s)	100, 223, 233, 1315
SexAI	ACCWGGT	1 cut(s)	303
SfaNI	GCATC	4 cut(s)	558, 619, 736, 1645
SfiI	GGCCNNNNNGGCC	1 cut(s)	889
SfuI	TTCGAA	1 cut(s)	1548
SinI	GGWCC	3 cut(s)	658, 1300, 1649
SmaI	CCCGGG	1 cut(s)	218
SmiI	ATTTAAAT	1 cut(s)	1437
SmiMI	CAYNNNNRTG	1 cut(s)	1040
SnaBI	TACGTA	1 cut(s)	542
SseBI	AGGCCT	1 cut(s)	883
SsiI	CCGC	9 cut(s)	16, 38, 63, 93, 126, 281, 295, 317, 435
SspMI	CTAG	4 cut(s)	234, 426, 633, 1634
StuI	AGGCCT	1 cut(s)	883
StyD4I	CCNGG	5 cut(s)	215, 216, 303, 574, 1060
StyI	CCWWGG	2 cut(s)	121, 1614
SwaI	ATTTAAAT	1 cut(s)	1437
TaaI	ACNGT	3 cut(s)	725, 832, 1454
TaiI	ACGT	4 cut(s)	160, 528, 544, 1642
TaqI	TCGA	4 cut(s)	194, 976, 1008, 1548
TaqII	GACCGA	1 cut(s)	1288
TauI	GCSGC	5 cut(s)	18, 40, 129, 284, 298
TfiI	GAWTC	1 cut(s)	386
Tru1I	TTAA	9 cut(s)	495, 593, 675, 774, 993, 1344, 1374, 1436, 1536
Tru9I	TTAA	9 cut(s)	495, 593, 675, 774, 993, 1344, 1374, 1436, 1536
TscAI	CASTG	5 cut(s)	409, 668, 721, 837, 988
TseFI	GTSAC	3 cut(s)	508, 1352, 1390
TseI	GCWGC	6 cut(s)	23, 237, 266, 269, 1625, 1658
Tsp45I	GTSAC	3 cut(s)	508, 1352, 1390
TspDTI	ATGAA	6 cut(s)	129, 243, 569, 1024, 1455, 1578
TspMI	CCCGGG	1 cut(s)	216
TspRI	CASTG	5 cut(s)	409, 668, 721, 837, 988
VpaK11BI	GGWCC	3 cut(s)	658, 1300, 1649
VspI	ATTAAT	1 cut(s)	675
XapI	RAATTY	5 cut(s)	560, 623, 650, 1004, 1516
XceI	RCATGY	3 cut(s)	1021, 1160, 1272
XmaI	CCCGGG	1 cut(s)	216
XmiI	GTMKAC	2 cut(s)	528, 1186
XmnI	GAANNNNTTC	1 cut(s)	560
XspI	CTAG	4 cut(s)	234, 426, 633, 1634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.