Rroxscaffold_7G00203710
MYB Family

SWI SNF complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0006872
Physical Location & Seq
Reverse (-)
52606900 .. 52612476
5577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00203710.1

Sequence Viewer

Length: 2997 bp
ATGGAAGAAAAACGCGGAGACGCCGGAACTCAGCCTCCGGCTAATGCCGACTCCCCGGCCACCGAGCCTACTTCTTCGAGACGCCGCGCCGGAGGCCAAAAGCGAAAGGCCAGCAGCCTCGGCGGCTCGGGCTCTTCATCAACACCGTCGAAACGCTTGACTCGCGAGAAGGCTTCGCTTTCTCACCCTCCGATCCACAACGGCCCTTTGACGAGGGCCCGCCAGGGGCCCAATAACCATGCGTCGGCCTCAGCCGCGGCCGTGAAGCCTGCTGCTCAGACGAAGCGGCCGGAGCCGTCGTCGGTGGAGGCGGAGCGGGCTAAAAGGGAGAGCGAGTTGGAGGCTTTGGAGGCTTCTATGGAAGCTGAGTTTGAAGCCATTAGATCTCGCGATGCCAATGCTCATGTGGTTCCCAGTCATTGTGGTTGGTTTTCATGGACAAAGATTCACGCCATTGAGGAGCGTATGTTGCCATCTTTCTTTAATGGGAAGTCTGATACTCGAACTCCCGATAGATACCTGGAGATACGCAATTGTATTATGAAAAAATTCCATGCGAATCCGAGAACATTGGTTGAACTGAAGGATATGTTGGAGCTTGAAGTGGGAGACTTCGATTCAAGACAAGAAGTAATGGAATTTTTGGACCACTGGGGTTTGATAAATTTCCACCCTTTCCCACCAACAGTTTCTACTGTTGCAAATGTCAACAGTGATGAGGTGACAGAAAGGGATTCTTTGCTAGATAAGTTGTATCACTTTGAAGCACTAGAATCACGATCGTCAGTGGTTCCTAAGACTAACTTATTTACTCCAACTGTGCCATCTGGTCTGTTCCCAGAGTCTACATTTGCTGAAGAATTGGTGAGGCCTGAGGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAACGCTACCATTGCCAGAAGCAGGCAGATTTTGATCTGTGTTCTGATTGCTTTAACAACGGGAAATTCGATTCGGGTATGTCTTCATCAGATTTTATTCTTATGGAGCCTGCTGAGGCTCCCGGGGTAAGTGGTGGGAAGTGGACAGATCAAGAGACCCTCCTTCTCCTTGAAGCATTAGAATTATATAAAGAAAACTGGAATGAGATTGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGTATATTGCACTTTGTTCAAATGCCAATCGAGGATACCTTCCTAGATCATGATGATGATATTGATTCCAGTGCCAAAGAAACTGCAGATCCAACTTCAACTAACAATGATTTATTGCCCCCCAAAGATGCCCCTGAAACAACAGAGAATAAGACAAGTGCTAATGAGAGTGACCCTCAAACTTCCCCGATGGAAATTTCAAAAGAAGAAGCAAGTGAGGTTAATGTTGGGGAGGATACTTCAAAGCCAGAAGATGAAAATGAAGTCAAAGTTGGTCAGGACACCTCAAAGTTGGAAGATACTAGTGATTTGAAAATTGATCAGGAAACAGATGAGAACCTTGCATTGAAGGCTCTTAAAGAAGCCTTTGAAGTTGTTGGTTATCCTCAAACACCTGAAAGTCAACTCTCATTTGCAGATGTGGGAAACCCTGCCATGGCATTGGCAGCATTCCTGGCACGGTTGGTGGGACCTGATCATGCCATTGCCTCAGCACATAATTCTTTGAAATCCATATCTGCAGATTCTCCTGGCATTGAGCTGGCTTCGAGGCACTGCTTTATTTTGGAAGATCCACCAAATGACAGAAAGGAACAAGCTAGTCATGATAGTGTTGCTGCTGAAAGGGAAGTGCAGAGTGAGAAAATCGATGAAGAAAATAGTCATAAAGAGGATAACTCCACCTCAGGTTTGGAAGATAGAGGTGTATCAAATGATAACAGCGACAAGAAACTTGAAGAAGTTACTCCTGAAGAAAAGTCACAATCTACAAAAGAACAAGTTGACAGGGTTTCTCATGAGGAAGTAGGAACTGATAAATTGAACAAGTCAAACAACTCAGAGTTACCAAATGACCAACCACCAACTTTGGGGGAGTCAGATAATTCAAAAGTTGACACACCACCAAGTTCAGTAAAGGAGTCTGGAGAGGGAACTTCAGTAGGACAGCCTTCTGAAACCATAGAGACACCAATGGATGTGGATATGTCTGACTCCAATCCCTCAAGGAAGACGGAGCCTCAGCAACCAGTTACATCAAATTCAGCTGAGGAACCTTCTCAGTCTACAGAGGCATCAAAAGAAGTGGATGTATCTAATGCTCTGCCTTCAGAAAGAGATGAGCCTCCACCACCAGTTACTGAAGAACCCCCTCAACCTACAGAAACATCAAAGGATGTTCTTATGGTGTGTGACTCTCAGCCCCCACAAGAGAATGAGCCTTCCCAACCAGTTGAAAACACTACAAGTGAGGATCAGACTGATGATAGTAAACACGAGAAGCATGACTGTACAGACCCAAAAAATGATAAAAAGCAAGAGACAAAAGGCGAACAGAAGATTGATAAAATAAAGCAAGCTGCAGTTTCTGCAGTGTCAGCAGCTGCTGTGAAGGCAAAACTTCTAGCAGAACAGGAAGAAGATCAAATTCGACAGCTTGCAGCAATGTTGATAGAGAAGCAGTTGCATAAGTTGGAAGCCAAGTTAGGTTTCTTTCATGAGATGGAAAGTGTTGTGATGAGGGTAAAAGAACAATTGGATAGGTCAAGACAGAAGCTCTACCATGAGCGGGCACAGATAATTGCTGCCCGACTTGGCTTACCAGGTTCCTCATCTAGAGGAATGCTATCTGCGATGCCTACCAATAGAATGGCCACGAATGCTGCAAACTCAGTTCCAAGGCCCCCACTTATGATGACCTCTCAAAGGCCACCCATGTCGAGACCCACAGGGGCGGTGGCTTTGACCCCTTTAAACCAATTTTCGTCCTCAGGAAGTGCGATTCGGCCTCCCAGTCAGGACAGCCTTTCTTCTATTGGGACAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

998

Amino Acids

109.38

Weight (kDa)

4.81

Isoelectric Point (pI)

54.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIRM PF04433 145 - 223 1.6e-21 SWIRM domain
ZZ PF00569 297 - 332 1.2e-08 Zinc finger, ZZ type
Myb_DNA-binding PF00249 355 - 397 4.4e-12 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 357 - 397 1.3e-06 Myb-like DNA-binding domain
SWIRM-assoc_1 PF16495 846 - 921 1.3e-23 SWIRM-associated region 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 316, 2737
AccI GTMKAC 2 cut(s) 845, 2234
AccII CGCG 5 cut(s) 15, 87, 165, 257, 390
AclWI GGATC 4 cut(s) 187, 1253, 1736, 2430
AcoI YGGCCR 4 cut(s) 57, 258, 287, 2820
AcsI RAATTY 7 cut(s) 548, 638, 664, 992, 1365, 2209, 2595
AcuI CTGAAG 6 cut(s) 602, 876, 1941, 2091, 2262, 2331
AcyI GRCGYC 2 cut(s) 21, 82
AfaI GTAC 2 cut(s) 893, 2461
AfiI CCNNNNNNNGG 7 cut(s) 225, 244, 949, 1606, 2039, 2737, 2874
AflIII ACRYGT 1 cut(s) 1144
AhlI ACTAGT 1 cut(s) 1472
AjnI CCWGG 5 cut(s) 222, 519, 1623, 1699, 2770
AjuI GAANNNNNNNTTGG 6 cut(s) 575, 607, 1425, 1457, 2642, 2674
AloI GAACNNNNNNTCC 2 cut(s) 19, 51
Alw26I GTCTC 7 cut(s) 12, 73, 603, 1076, 2129, 2483, 2884
AlwI GGATC 4 cut(s) 187, 1253, 1736, 2430
AlwNI CAGNNNCTG 4 cut(s) 2309, 2537, 2552, 2555
Ama87I CYCGRG 2 cut(s) 127, 1049
ApaI GGGCCC 2 cut(s) 220, 231
ApoI RAATTY 7 cut(s) 548, 638, 664, 992, 1365, 2209, 2595
Asp700I GAANNNNTTC 1 cut(s) 548
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 9 cut(s) 203, 216, 217, 227, 228, 646, 878, 1640, 2850
AsuC2I CCSGG 3 cut(s) 56, 1050, 1051
AsuHPI GGTGA 3 cut(s) 176, 733, 877
AvaI CYCGRG 2 cut(s) 127, 1049
AvaII GGWCC 2 cut(s) 646, 1640
AxyI CCTNAGG 3 cut(s) 873, 1855, 2938
BaeGI GKGCMC 3 cut(s) 220, 231, 2743
BalI TGGCCA 1 cut(s) 2822
BanII GRGCYC 3 cut(s) 134, 220, 231
BauI CACGAG 1 cut(s) 2444
BbsI GAAGAC 2 cut(s) 1002, 2186
BbvCI CCTCAGC 5 cut(s) 250, 1041, 1660, 2190, 2217
BccI CCATC 4 cut(s) 481, 832, 1354, 2665
BceAI ACGGC 3 cut(s) 217, 245, 280
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 5 cut(s) 224, 521, 1625, 1701, 2772
BciVI GTATCC 2 cut(s) 1198, 1399
BclI TGATCA 2 cut(s) 1489, 1645
BcnI CCSGG 3 cut(s) 56, 1050, 1051
BcoDI GTCTC 7 cut(s) 12, 73, 603, 1076, 2129, 2483, 2884
BcuI ACTAGT 1 cut(s) 1472
BfaI CTAG 7 cut(s) 743, 770, 1214, 1473, 1770, 2573, 2784
BfmI CTRYAG 6 cut(s) 1254, 1689, 2235, 2328, 2529, 2538
BfuI GTATCC 2 cut(s) 1198, 1399
BglI GCCNNNNNGGC 2 cut(s) 123, 877
BglII AGATCT 1 cut(s) 383
Bme1390I CCNGG 8 cut(s) 56, 224, 521, 1050, 1051, 1625, 1701, 2772
Bme18I GGWCC 2 cut(s) 646, 1640
BmeT110I CYCGRG 2 cut(s) 127, 1049
BmgT120I GGNCC 9 cut(s) 203, 216, 217, 227, 228, 646, 878, 1640, 2850
BmrFI CCNGG 8 cut(s) 56, 224, 521, 1050, 1051, 1625, 1701, 2772
BmrI ACTGGG 3 cut(s) 408, 661, 2955
BmsI GCATC 4 cut(s) 382, 1288, 2252, 2793
BmuI ACTGGG 3 cut(s) 408, 661, 2955
BpiI GAAGAC 2 cut(s) 1002, 2186
BplI GAGNNNNNCTC 4 cut(s) 1330, 1362, 1832, 1864
BpmI CTGGAG 2 cut(s) 542, 2115
Bpu10I CCTNAGC 5 cut(s) 250, 1041, 1660, 2190, 2217
BpuEI CTTGAG 1 cut(s) 2158
BpuMI CCSGG 3 cut(s) 56, 1050, 1051
Bsa29I ATCGAT 1 cut(s) 1818
BsaBI GATNNNNATC 1 cut(s) 960
BsaHI GRCGYC 2 cut(s) 21, 82
BsaI GGTCTC 2 cut(s) 1076, 2884
BsaJI CCNNGG 8 cut(s) 54, 118, 223, 255, 1049, 1050, 1605, 2846
Bsc4I CCNNNNNNNGG 7 cut(s) 225, 244, 949, 1606, 2039, 2737, 2874
Bse1I ACTGG 8 cut(s) 414, 656, 1130, 1239, 2198, 2303, 2399, 2961
Bse21I CCTNAGG 3 cut(s) 873, 1855, 2938
Bse3DI GCAATG 4 cut(s) 895, 937, 1653, 2619
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 5 cut(s) 224, 521, 1625, 1701, 2772
BseCI ATCGAT 1 cut(s) 1818
BseDI CCNNGG 8 cut(s) 54, 118, 223, 255, 1049, 1050, 1605, 2846
BseGI GGATG 3 cut(s) 2152, 2263, 2350
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 7 cut(s) 225, 244, 949, 1606, 2039, 2737, 2874
BseMI GCAATG 4 cut(s) 895, 937, 1653, 2619
BseNI ACTGG 8 cut(s) 414, 656, 1130, 1239, 2198, 2303, 2399, 2961
BseRI GAGGAG 1 cut(s) 473
BseSI GKGCMC 3 cut(s) 220, 231, 2743
BseX3I CGGCCG 2 cut(s) 258, 287
BsgI GTGCAG 1 cut(s) 1823
Bsh1236I CGCG 5 cut(s) 15, 87, 165, 257, 390
Bsh1285I CGRYCG 3 cut(s) 261, 290, 782
BshVI ATCGAT 1 cut(s) 1818
BsiEI CGRYCG 3 cut(s) 261, 290, 782
BsiHKCI CYCGRG 2 cut(s) 127, 1049
BsiSI CCGG 6 cut(s) 24, 38, 56, 90, 290, 1050
BslFI GGGAC 1 cut(s) 1653
BslI CCNNNNNNNGG 7 cut(s) 225, 244, 949, 1606, 2039, 2737, 2874
BsmAI GTCTC 7 cut(s) 12, 73, 603, 1076, 2129, 2483, 2884
BsmBI CGTCTC 2 cut(s) 12, 73
BsmFI GGGAC 1 cut(s) 1653
BsmI GAATGC 3 cut(s) 1619, 2796, 2833
Bso31I GGTCTC 2 cut(s) 1076, 2884
BsoBI CYCGRG 2 cut(s) 127, 1049
Bsp120I GGGCCC 2 cut(s) 216, 227
Bsp1286I GDGCHC 4 cut(s) 134, 220, 231, 2743
Bsp1407I TGTACA 1 cut(s) 2459
Bsp19I CCATGG 1 cut(s) 1605
Bsp68I TCGCGA 2 cut(s) 165, 390
BspDI ATCGAT 1 cut(s) 1818
BspFNI CGCG 5 cut(s) 15, 87, 165, 257, 390
BspHI TCATGA 4 cut(s) 1219, 1774, 1966, 2665
BspMAI CTGCAG 4 cut(s) 1258, 1693, 2533, 2542
BspPI GGATC 4 cut(s) 187, 1253, 1736, 2430
BspQI GCTCTTC 1 cut(s) 139
BspTNI GGTCTC 2 cut(s) 1076, 2884
BsrBI CCGCTC 2 cut(s) 316, 2737
BsrDI GCAATG 4 cut(s) 895, 937, 1653, 2619
BsrGI TGTACA 1 cut(s) 2459
BsrI ACTGG 8 cut(s) 414, 656, 1130, 1239, 2198, 2303, 2399, 2961
BssECI CCNNGG 8 cut(s) 54, 118, 223, 255, 1049, 1050, 1605, 2846
BssNI GRCGYC 2 cut(s) 21, 82
BssSI CACGAG 1 cut(s) 2444
BssT1I CCWWGG 2 cut(s) 1605, 2846
Bst2BI CACGAG 1 cut(s) 2444
Bst2UI CCWGG 5 cut(s) 224, 521, 1625, 1701, 2772
Bst4CI ACNGT 7 cut(s) 147, 688, 697, 713, 820, 1632, 2459
Bst6I CTCTTC 1 cut(s) 139
BstACI GRCGYC 2 cut(s) 21, 82
BstAPI GCANNNNNTGC 1 cut(s) 2537
BstAUI TGTACA 1 cut(s) 2459
BstDSI CCRYGG 2 cut(s) 255, 1605
BstENI CCTNNNNNAGG 1 cut(s) 2872
BstF5I GGATG 3 cut(s) 2152, 2263, 2350
BstFNI CGCG 5 cut(s) 15, 87, 165, 257, 390
BstHHI GCGC 1 cut(s) 89
BstMAI GTCTC 7 cut(s) 12, 73, 603, 1076, 2129, 2483, 2884
BstMCI CGRYCG 3 cut(s) 261, 290, 782
BstNI CCWGG 5 cut(s) 224, 521, 1625, 1701, 2772
BstNSI RCATGY 1 cut(s) 1148
BstSCI CCNGG 8 cut(s) 54, 222, 519, 1048, 1049, 1623, 1699, 2770
BstSFI CTRYAG 6 cut(s) 1254, 1689, 2235, 2328, 2529, 2538
BstSLI GKGCMC 3 cut(s) 220, 231, 2743
BstUI CGCG 5 cut(s) 15, 87, 165, 257, 390
BstV2I GAAGAC 2 cut(s) 1002, 2186
BstX2I RGATCY 3 cut(s) 383, 1258, 1741
BstXI CCANNNNNNTGG 2 cut(s) 1612, 2818
BstYI RGATCY 3 cut(s) 383, 1258, 1741
BstZI CGGCCG 2 cut(s) 258, 287
Bsu15I ATCGAT 1 cut(s) 1818
Bsu36I CCTNAGG 3 cut(s) 873, 1855, 2938
BsuI GTATCC 2 cut(s) 1198, 1399
BsuTUI ATCGAT 1 cut(s) 1818
BtgI CCRYGG 2 cut(s) 255, 1605
BtgZI GCGATG 2 cut(s) 405, 2816
BtsCI GGATG 3 cut(s) 2152, 2263, 2350
BtsI GCAGTG 2 cut(s) 1723, 2547
BtsIMutI CAGTG 7 cut(s) 649, 718, 792, 1175, 1246, 1723, 2547
BtuMI TCGCGA 2 cut(s) 165, 390
CaiI CAGNNNCTG 4 cut(s) 2309, 2537, 2552, 2555
CciI TCATGA 4 cut(s) 1219, 1774, 1966, 2665
CfoI GCGC 1 cut(s) 89
Cfr13I GGNCC 9 cut(s) 203, 216, 217, 227, 228, 646, 878, 1640, 2850
Cfr42I CCGCGG 1 cut(s) 258
Cfr9I CCCGGG 1 cut(s) 1049
ClaI ATCGAT 1 cut(s) 1818
CseI GACGC 3 cut(s) 29, 90, 231
CsiI ACCWGGT 1 cut(s) 2770
Csp6I GTAC 2 cut(s) 892, 2460
CspCI CAANNNNNGTGG 6 cut(s) 2019, 2054, 2130, 2165, 2235, 2270
CviQI GTAC 2 cut(s) 892, 2460
DraI TTTAAA 1 cut(s) 2922
EaeI YGGCCR 4 cut(s) 57, 258, 287, 2820
EagI CGGCCG 2 cut(s) 258, 287
Eam1104I CTCTTC 1 cut(s) 139
EarI CTCTTC 1 cut(s) 139
EciI GGCGGA 1 cut(s) 326
EclXI CGGCCG 2 cut(s) 258, 287
Eco130I CCWWGG 2 cut(s) 1605, 2846
Eco147I AGGCCT 1 cut(s) 871
Eco24I GRGCYC 3 cut(s) 134, 220, 231
Eco31I GGTCTC 2 cut(s) 1076, 2884
Eco47I GGWCC 2 cut(s) 646, 1640
Eco52I CGGCCG 2 cut(s) 258, 287
Eco57I CTGAAG 6 cut(s) 602, 876, 1941, 2091, 2262, 2331
Eco81I CCTNAGG 3 cut(s) 873, 1855, 2938
Eco88I CYCGRG 2 cut(s) 127, 1049
EcoNI CCTNNNNNAGG 1 cut(s) 2872
EcoO109I RGGNCCY 4 cut(s) 216, 227, 1640, 2850
EcoRII CCWGG 5 cut(s) 222, 519, 1623, 1699, 2770
EcoT14I CCWWGG 2 cut(s) 1605, 2846
EcoT38I GRGCYC 3 cut(s) 134, 220, 231
ErhI CCWWGG 2 cut(s) 1605, 2846
Esp3I CGTCTC 2 cut(s) 12, 73
FalI AAGNNNNNCTT 4 cut(s) 721, 753, 788, 820
FaqI GGGAC 1 cut(s) 1653
FauI CCCGC 3 cut(s) 227, 309, 2730
FbaI TGATCA 2 cut(s) 1489, 1645
FblI GTMKAC 2 cut(s) 845, 2234
FokI GGATG 3 cut(s) 2159, 2270, 2357
FriOI GRGCYC 3 cut(s) 134, 220, 231
FspBI CTAG 7 cut(s) 743, 770, 1214, 1473, 1770, 2573, 2784
GlaI GCGC 1 cut(s) 88
GsuI CTGGAG 2 cut(s) 542, 2115
HapII CCGG 6 cut(s) 24, 38, 56, 90, 290, 1050
HgaI GACGC 3 cut(s) 29, 90, 231
HhaI GCGC 1 cut(s) 89
Hin1I GRCGYC 2 cut(s) 21, 82
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HincII GTYRAC 4 cut(s) 709, 1574, 1954, 2065
HindII GTYRAC 4 cut(s) 709, 1574, 1954, 2065
HpaII CCGG 6 cut(s) 24, 38, 56, 90, 290, 1050
HphI GGTGA 3 cut(s) 176, 733, 877
Hpy166II GTNNAC 8 cut(s) 709, 846, 1071, 1574, 1954, 2065, 2235, 2441
Hpy8I GTNNAC 8 cut(s) 709, 846, 1071, 1574, 1954, 2065, 2235, 2441
Hpy99I CGWCG 4 cut(s) 151, 247, 301, 304
HpyCH4III ACNGT 7 cut(s) 147, 688, 697, 713, 820, 1632, 2459
Hsp92I GRCGYC 2 cut(s) 21, 82
HspAI GCGC 1 cut(s) 87
Ksp22I TGATCA 2 cut(s) 1489, 1645
KspI CCGCGG 1 cut(s) 258
LguI GCTCTTC 1 cut(s) 139
LmnI GCTCC 7 cut(s) 292, 313, 460, 595, 1033, 1051, 2185
LweI GCATC 4 cut(s) 382, 1288, 2252, 2793
MabI ACCWGGT 1 cut(s) 2770
MaeI CTAG 7 cut(s) 743, 770, 1214, 1473, 1770, 2573, 2784
MaeIII GTNAC 8 cut(s) 721, 1340, 1912, 1929, 2013, 2200, 2305, 2360
MbiI CCGCTC 2 cut(s) 316, 2737
MfeI CAATTG 2 cut(s) 532, 2702
MflI RGATCY 3 cut(s) 383, 1258, 1741
MhlI GDGCHC 4 cut(s) 134, 220, 231, 2743
MlsI TGGCCA 1 cut(s) 2822
MluNI TGGCCA 1 cut(s) 2822
MlyI GAGTC 7 cut(s) 44, 154, 851, 2054, 2099, 2156, 2357
MmeI TCCRAC 6 cut(s) 318, 573, 839, 1286, 1443, 2622
Mox20I TGGCCA 1 cut(s) 2822
MroXI GAANNNNTTC 1 cut(s) 548
MscI TGGCCA 1 cut(s) 2822
MseI TTAA 5 cut(s) 483, 981, 1392, 1527, 2921
MslI CAYNNNNRTG 2 cut(s) 1224, 1779
Msp20I TGGCCA 1 cut(s) 2822
MspA1I CMGCKG 5 cut(s) 257, 884, 914, 2216, 2552
MspI CCGG 6 cut(s) 24, 38, 56, 90, 290, 1050
MspR9I CCNGG 8 cut(s) 56, 224, 521, 1050, 1051, 1625, 1701, 2772
MunI CAATTG 2 cut(s) 532, 2702
Mva1269I GAATGC 3 cut(s) 1619, 2796, 2833
MvaI CCWGG 5 cut(s) 224, 521, 1625, 1701, 2772
MvnI CGCG 5 cut(s) 15, 87, 165, 257, 390
NciI CCSGG 3 cut(s) 56, 1050, 1051
NcoI CCATGG 1 cut(s) 1605
NmeAIII GCCGAG 1 cut(s) 99
NmuCI GTSAC 4 cut(s) 721, 1340, 1929, 2360
NruI TCGCGA 2 cut(s) 165, 390
NspI RCATGY 1 cut(s) 1148
PagI TCATGA 4 cut(s) 1219, 1774, 1966, 2665
PceI AGGCCT 1 cut(s) 871
PciI ACATGT 1 cut(s) 1144
PciSI GCTCTTC 1 cut(s) 139
PcsI WCGNNNNNNNCGW 1 cut(s) 993
PctI GAATGC 3 cut(s) 1619, 2796, 2833
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 9 cut(s) 445, 559, 617, 734, 773, 998, 1235, 1694, 2950
Ple19I CGATCG 1 cut(s) 782
PleI GAGTC 7 cut(s) 44, 154, 850, 2053, 2098, 2156, 2357
PpsI GAGTC 7 cut(s) 44, 154, 850, 2053, 2098, 2156, 2357
PpuMI RGGWCCY 1 cut(s) 1640
PscI ACATGT 1 cut(s) 1144
Psp5II RGGWCCY 1 cut(s) 1640
Psp6I CCWGG 5 cut(s) 222, 519, 1623, 1699, 2770
PspGI CCWGG 5 cut(s) 222, 519, 1623, 1699, 2770
PspOMI GGGCCC 2 cut(s) 216, 227
PspPI GGNCC 9 cut(s) 203, 216, 217, 227, 228, 646, 878, 1640, 2850
PspPPI RGGWCCY 1 cut(s) 1640
PstI CTGCAG 4 cut(s) 1258, 1693, 2533, 2542
PstNI CAGNNNCTG 4 cut(s) 2309, 2537, 2552, 2555
PsuI RGATCY 3 cut(s) 383, 1258, 1741
PvuI CGATCG 1 cut(s) 782
PvuII CAGCTG 4 cut(s) 884, 914, 2216, 2552
RruI TCGCGA 2 cut(s) 165, 390
RsaI GTAC 2 cut(s) 893, 2461
RsaNI GTAC 2 cut(s) 892, 2460
RseI CAYNNNNRTG 2 cut(s) 1224, 1779
SacII CCGCGG 1 cut(s) 258
SapI GCTCTTC 1 cut(s) 139
SaqAI TTAA 5 cut(s) 483, 981, 1392, 1527, 2921
Sau96I GGNCC 9 cut(s) 203, 216, 217, 227, 228, 646, 878, 1640, 2850
SchI GAGTC 7 cut(s) 44, 154, 851, 2054, 2099, 2156, 2357
ScrFI CCNGG 8 cut(s) 56, 224, 521, 1050, 1051, 1625, 1701, 2772
SduI GDGCHC 4 cut(s) 134, 220, 231, 2743
SexAI ACCWGGT 1 cut(s) 2770
SfaNI GCATC 4 cut(s) 382, 1288, 2252, 2793
SfcI CTRYAG 6 cut(s) 1254, 1689, 2235, 2328, 2529, 2538
SfiI GGCCNNNNNGGCC 1 cut(s) 877
Sfr303I CCGCGG 1 cut(s) 258
SgrBI CCGCGG 1 cut(s) 258
SinI GGWCC 2 cut(s) 646, 1640
SmaI CCCGGG 1 cut(s) 1051
SmiMI CAYNNNNRTG 2 cut(s) 1224, 1779
SmlI CTYRAG 1 cut(s) 2173
SmoI CTYRAG 1 cut(s) 2173
SpeI ACTAGT 1 cut(s) 1472
SseBI AGGCCT 1 cut(s) 871
SspMI CTAG 7 cut(s) 743, 770, 1214, 1473, 1770, 2573, 2784
StuI AGGCCT 1 cut(s) 871
StyD4I CCNGG 8 cut(s) 54, 222, 519, 1048, 1049, 1623, 1699, 2770
StyI CCWWGG 2 cut(s) 1605, 2846
TaaI ACNGT 7 cut(s) 147, 688, 697, 713, 820, 1632, 2459
TatI WGTACW 1 cut(s) 2459
TauI GCSGC 5 cut(s) 87, 126, 257, 260, 289
TfiI GAWTC 9 cut(s) 445, 559, 617, 734, 773, 998, 1235, 1694, 2950
Tru1I TTAA 5 cut(s) 483, 981, 1392, 1527, 2921
Tru9I TTAA 5 cut(s) 483, 981, 1392, 1527, 2921
TscAI CASTG 7 cut(s) 656, 718, 792, 1175, 1246, 1730, 2547
TseFI GTSAC 4 cut(s) 721, 1340, 1929, 2360
Tsp45I GTSAC 4 cut(s) 721, 1340, 1929, 2360
TspDTI ATGAA 8 cut(s) 126, 423, 557, 1002, 1440, 1446, 1836, 2654
TspGWI ACGGA 1 cut(s) 2198
TspMI CCCGGG 1 cut(s) 1049
TspRI CASTG 7 cut(s) 656, 718, 792, 1175, 1246, 1730, 2547
VpaK11BI GGWCC 2 cut(s) 646, 1640
XagI CCTNNNNNAGG 1 cut(s) 2872
XapI RAATTY 7 cut(s) 548, 638, 664, 992, 1365, 2209, 2595
XbaI TCTAGA 1 cut(s) 2783
XceI RCATGY 1 cut(s) 1148
XcmI CCANNNNNNNNNTGG 3 cut(s) 403, 1858, 2902
XmaI CCCGGG 1 cut(s) 1049
XmiI GTMKAC 2 cut(s) 845, 2234
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 7 cut(s) 743, 770, 1214, 1473, 1770, 2573, 2784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.