Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006849

Physical Location & Seq

Genomic Coordinates Forward (+)

9971862 .. 9978087

Gene Structure 6226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11440.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

ATGTACAGGAGGATGTTGTGTTCGTTTTATAGACCCTTTACACTAGACAACTCCAAGTCCATGCATACCAAAGCCAACTACTTGCTCAACTTGGAACCAGCTTTGGCAACCCAGTTTGATACTATGTTGCAAGCATGCAGTGACCATTCTCTTATTCAACCAGGTAGACAACTTCATTCACATGCTATTTGCACTGGGCTTTTAGAAAATAGTCTTGTTGCCGCAAAGCTCCTTGGCATGTATTTCCATTGTGCTAGTGTTGTGGATGCCAAGAACCTGTTTTATCACCTTGATTTGAACTGTATTTTTCCCTGGAACTGTATGATTAGAGGGTTTAGTGTATTGGGCCGCTTTGATTTTGCCATGCTCTTTTATTACAAGATGTTGGCTGCTGGAGTTTCACCTGACAAGTACACTTTTCCTAGTGTAATCAAGGCTTGTGGTGGTTTGAATAATGTGAGATTGGGTAGAGCAGTGCATGATTCAATGCAGGTCATGGGTTTTGAGGTTGACATATACGCCGGTAGTTCTTTACTTCAATTGTATGTCAACAATGGCTGTATACGTGATGCACGGCACGTGTTTGATAAAATGTCCCACAAAGATTGTGTTTCATGGAATGTCATGCTTCATGGATATGCTAAAAAGGGGGAGTTCAGTAATGCTGTTGGTATATTTATGGAAATGAGAAGCAGTGAAATTAAGGCCAATGCGGTGACATTTTCTTGCGTTTTGTCTGTTTGTGCCTCAGAAGCCATGATTAATTTTGGTACTCAACTCCATGGGTTAGTTGTTGCTTATGGTCTGGAGTCGCATTCTTCAGTGGCTAATACGTTGATAGCCGTGTACTCTAAATGTCATATCTTGTCTGACGCTCGTAAGTTGTTTGATATGATGCCACGAACTGATGTAGTGAGATGGAATGGGATGATTTCTGGTTATATACAAAATGGGTTTATGAGTGAGGCTTCAGGTTTGTTTGATGAGATGATATCTGCTGGTGTCAAACCTGACTCCATTACATTGGCGAGCTTTCTTCCGTCCGTTACTCAACCATTTAACCTCAAGCAAGCTAAAGAAATTCATGGTTACATTATTAGACACTGTGTACCTTTTGATGTGTATCTGAAAAGTGCACTTATTGATGTATATTCCAAGTGCAGAAGCGTGGATATGGCACGCAATATTTTCAACCAAAGGACCAGAACTGATGTCGTGATGTGTACTGCTATGATTTCAGGGCTTGTCCTTAACGGGATGAACACTGATGCATTGGAAATTTTTAGATGGTTGCTTAGAGAGAATTTGAGGCCTAATACTCTCACCATGGCAAGTATTCTGCCAGCTTGTGCTGGTCTGGCTGCTTTGAAATTGGGAAAGGAATTGCATGGCAATATCCTCAAGCACGGGCTTGATAAAAGCTTTCATGTAGGTAGTTCCCTTATTGGCATGTATGCAAAATCGGGAAGGGTTGATCTTGCTCATCTAGTTTTCAAAAGATTGTCGGAAAGAGATGCAATATGTTGGAATTCCATGTTAACAAGCTATTCTCAAAATGGTAAACCAGAAGATGCAATGGATCTATTTCGTCACATGGGGATGGGAGGTGTTAAGTATGACTGTGTAAGCTTTTCAGCTATACTTTCTGTTTGTGCAAACTTACCAGCACTTCATTATGGGAAAGAGATTCATGGTTTCATTATTAAAAGTGAATTTAGTTCTGATATTTTTGCCCAGAGTGCACTCATTGATATGTATGCCAAATGTGGAAACTTAGTTATTGCTCGCCATGTATTTGACTCAATGGAAGAGAAGAATGAAGTTTCGTGGAACAGCATTATTTCTGCTTATGGTTATCATGGTCGCCTTAAGGACTCTCTTGGTCTGTTTCGTGATATGCTAGATAACGGAATCCTACCTGATCATGTCTCTTTTGTTGGTGTGTTATCTGCTTGTGTCCATGCAGGCCAAGTTGATGATGGAATTCTCTATTTCCGCTGCATGACTGAGGAATATGGGATTCCAGCTTCGTCAGAGCATTATGCCCTCATGGTAGATCTACTTGGGCGTGCTGGACGTTTACACGAAGCATTTGAAACAATAAAGAGCATGCCATTTTCCCCAGGTTCTGGTGTCTGGGGAACATTGCTTGGAGCCTGTCGGGTACATGGAAACATCGAGCTTGCTGAAGAAGCATCAAGACATCTTTTTGACTTGGAACCAGAAAATTCAGGCTACTATATGCTACTCGCAAATATATATGCTGATGCTGGACAATGGGAGAACATGCGTAGGGTTCGAAATTTGATGAACGAAAGAGGAGTTCAGAAAATTCCTGGGTACAGTTGGATCGAGGTCAACAACAAGACTCATGTATTTGTTGCAGCGGACACAAGTCACCCACAATCTGCTATATTACATTCACTGCTCAACATTCTTCTTCTAGAGCTGAGAAAAGAGGGTTATAATCCTCAACCCTACCTTCCGATGCACCCACAGATAGTGGGTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

838

Amino Acids

93.32

Weight (kDa)

7.04

Isoelectric Point (pI)

45.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	102 - 147	4.2e-07	PPR repeat family
PPR_2	PF13041	202 - 249	4.5e-11	PPR repeat family
PPR	PF01535	204 - 232	5.7e-07	PPR repeat
PPR_2	PF13041	303 - 342	6.8e-09	PPR repeat family
PPR	PF01535	307 - 335	2.4e-07	PPR repeat
PPR_2	PF13041	404 - 451	3.3e-06	PPR repeat family
PPR_2	PF13041	505 - 553	1.4e-09	PPR repeat family
PPR	PF01535	508 - 534	7.4e-07	PPR repeat
PPR_2	PF13041	606 - 653	1.8e-09	PPR repeat family
PPR	PF01535	608 - 638	9.1e-07	PPR repeat
E_motif	PF20431	723 - 785	1e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21300
fragaria_vesca	FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440
malus_domestica	MD09G1249500.v1.1 MD17G1242300.v1.1
prunus_persica	Prupe.3G135500_v2.0.a1
pyrus_communis	pycom09g16630 pycom17g24490 pycom17g24500
rosa_chinensis	RchiOBHm_Chr7g0222301
rosa_laevigata	RLG00000002074
rosa_multiflora	Rmu_sc0007069.1_g000017
rosa_roxburghii	Rroxscaffold_3G00237140
rosa_rugosa	Rorug07G0207300 Rorug07G0207300 Rorug07G0207300 Rorug07G0207400 Rorug07G0207500
rosa_samantha	Rh7AG349000 Rh7BG339300 Rh7CG366400 Rh7DG345900
rosa_wichuraiana	Rw7G029520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2466
Acc36I	ACCTGC	1 cut(s)	481
AccB7I	CCANNNNNTGG	1 cut(s)	2129
AccI	GTMKAC	2 cut(s)	166, 562
AciI	CCGC	5 cut(s)	222, 349, 713, 1996, 2387
AclWI	GGATC	2 cut(s)	1587, 2357
AcsI	RAATTY	9 cut(s)	1080, 1278, 1303, 1528, 1712, 1983, 2227, 2302, 2331
AcuI	CTGAAG	3 cut(s)	804, 954, 2208
AcvI	CACGTG	1 cut(s)	580
AfaI	GTAC	8 cut(s)	5, 413, 772, 848, 1110, 1225, 2166, 2342
AfiI	CCNNNNNNNGG	1 cut(s)	2129
AflII	CTTAAG	1 cut(s)	1868
AflIII	ACRYGT	1 cut(s)	579
AgsI	TTSAA	9 cut(s)	158, 298, 451, 486, 539, 1192, 1369, 1495, 2096
AjnI	CCWGG	4 cut(s)	160, 311, 2122, 2335
AloI	GAACNNNNNNTCC	1 cut(s)	36
Alw21I	GWGCWC	2 cut(s)	1138, 1744
Alw26I	GTCTC	1 cut(s)	1933
Alw44I	GTGCAC	2 cut(s)	1134, 1740
AlwI	GGATC	2 cut(s)	1587, 2357
AlwNI	CAGNNNCTG	1 cut(s)	2129
AoxI	GGCC	4 cut(s)	346, 705, 1310, 1966
ApaLI	GTGCAC	2 cut(s)	1134, 1740
ApeKI	GCWGC	4 cut(s)	389, 1361, 1998, 2384
ApoI	RAATTY	9 cut(s)	1080, 1278, 1303, 1528, 1712, 1983, 2227, 2302, 2331
AseI	ATTAAT	1 cut(s)	762
AspS9I	GGNCC	2 cut(s)	346, 1200
AsuHPI	GGTGA	5 cut(s)	278, 393, 727, 1315, 2390
AsuII	TTCGAA	1 cut(s)	2299
AvaII	GGWCC	1 cut(s)	1200
BaeGI	GKGCMC	2 cut(s)	1138, 1744
BbrPI	CACGTG	1 cut(s)	580
Bbv12I	GWGCWC	2 cut(s)	1138, 1744
BbvI	GCAGC	4 cut(s)	376, 1348, 1985, 2396
BccI	CCATC	4 cut(s)	912, 1281, 1594, 1973
BceAI	ACGGC	2 cut(s)	590, 827
BciT130I	CCWGG	4 cut(s)	162, 313, 2124, 2337
BclI	TGATCA	1 cut(s)	1921
BcoDI	GTCTC	1 cut(s)	1933
BfaI	CTAG	6 cut(s)	44, 255, 423, 1487, 1901, 2444
BfrI	CTTAAG	1 cut(s)	1868
BfuAI	ACCTGC	1 cut(s)	481
BglII	AGATCT	1 cut(s)	2056
BisI	GCNGC	6 cut(s)	222, 349, 390, 1362, 1999, 2385
BlsI	GCNGC	6 cut(s)	223, 350, 391, 1363, 2000, 2386
Bme1390I	CCNGG	4 cut(s)	162, 313, 2124, 2337
Bme18I	GGWCC	1 cut(s)	1200
BmgT120I	GGNCC	2 cut(s)	346, 1200
BmiI	GGNNCC	3 cut(s)	96, 2155, 2220
BmrFI	CCNGG	4 cut(s)	162, 313, 2124, 2337
BmrI	ACTGGG	2 cut(s)	106, 204
BmsI	GCATC	9 cut(s)	256, 559, 885, 1258, 1504, 1561, 2204, 2257, 2478
BmuI	ACTGGG	2 cut(s)	106, 204
BoxI	GACNNNNGTC	1 cut(s)	2394
BpmI	CTGGAG	2 cut(s)	414, 827
Bpu14I	TTCGAA	1 cut(s)	2299
BpuEI	CTTGAG	2 cut(s)	1049, 1385
BsaAI	YACGTR	2 cut(s)	566, 580
BsaBI	GATNNNNATC	1 cut(s)	1122
BsaJI	CCNNGG	6 cut(s)	232, 311, 781, 1326, 2122, 2336
Bsc4I	CCNNNNNNNGG	1 cut(s)	2129
Bse118I	RCCGGY	1 cut(s)	521
Bse1I	ACTGG	2 cut(s)	112, 199
Bse3DI	GCAATG	2 cut(s)	1581, 2144
Bse8I	GATNNNNATC	1 cut(s)	1122
BseBI	CCWGG	4 cut(s)	162, 313, 2124, 2337
BseDI	CCNNGG	6 cut(s)	232, 311, 781, 1326, 2122, 2336
BseGI	GGATG	5 cut(s)	18, 271, 933, 1263, 1605
BseJI	GATNNNNATC	1 cut(s)	1122
BseLI	CCNNNNNNNGG	1 cut(s)	2129
BseMI	GCAATG	2 cut(s)	1581, 2144
BseMII	CTCAG	3 cut(s)	762, 1998, 2441
BseNI	ACTGG	2 cut(s)	112, 199
BseRI	GAGGAG	1 cut(s)	2334
BseSI	GKGCMC	2 cut(s)	1138, 1744
BseXI	GCAGC	4 cut(s)	376, 1348, 1985, 2396
BsgI	GTGCAG	1 cut(s)	1180
BshFI	GGCC	4 cut(s)	348, 707, 1312, 1968
BsiHKAI	GWGCWC	2 cut(s)	1138, 1744
BsiSI	CCGG	1 cut(s)	522
BslFI	GGGAC	1 cut(s)	580
BslI	CCNNNNNNNGG	1 cut(s)	2129
BsmAI	GTCTC	1 cut(s)	1933
BsmFI	GGGAC	1 cut(s)	580
BsmI	GAATGC	1 cut(s)	814
BsnI	GGCC	4 cut(s)	348, 707, 1312, 1968
Bsp119I	TTCGAA	1 cut(s)	2299
Bsp1286I	GDGCHC	2 cut(s)	1138, 1744
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
Bsp19I	CCATGG	2 cut(s)	781, 1326
BspACI	CCGC	5 cut(s)	222, 349, 713, 1996, 2387
BspANI	GGCC	4 cut(s)	348, 707, 1312, 1968
BspCNI	CTCAG	3 cut(s)	761, 1999, 2442
BspLI	GGNNCC	3 cut(s)	96, 2155, 2220
BspMI	ACCTGC	1 cut(s)	481
BspPI	GGATC	2 cut(s)	1587, 2357
BspT104I	TTCGAA	1 cut(s)	2299
BspTI	CTTAAG	1 cut(s)	1868
BsrDI	GCAATG	2 cut(s)	1581, 2144
BsrFI	RCCGGY	1 cut(s)	521
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	2 cut(s)	112, 199
BssAI	RCCGGY	1 cut(s)	521
BssECI	CCNNGG	6 cut(s)	232, 311, 781, 1326, 2122, 2336
BssMI	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
BssNAI	GTATAC	1 cut(s)	563
BssT1I	CCWWGG	3 cut(s)	232, 781, 1326
Bst1107I	GTATAC	1 cut(s)	563
Bst2UI	CCWGG	4 cut(s)	162, 313, 2124, 2337
Bst4CI	ACNGT	5 cut(s)	302, 320, 1106, 1622, 2345
Bst6I	CTCTTC	1 cut(s)	1803
BstAFI	CTTAAG	1 cut(s)	1868
BstAUI	TGTACA	1 cut(s)	3
BstBAI	YACGTR	2 cut(s)	566, 580
BstBI	TTCGAA	1 cut(s)	2299
BstDEI	CTNAG	5 cut(s)	748, 1295, 1774, 2007, 2450
BstDSI	CCRYGG	2 cut(s)	781, 1326
BstF5I	GGATG	5 cut(s)	18, 271, 933, 1263, 1605
BstKTI	GATC	5 cut(s)	1477, 1582, 1924, 2059, 2352
BstMAI	GTCTC	1 cut(s)	1933
BstMBI	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
BstMWI	GCNNNNNNNGC	4 cut(s)	752, 1358, 1739, 2192
BstNI	CCWGG	4 cut(s)	162, 313, 2124, 2337
BstNSI	RCATGY	6 cut(s)	138, 185, 241, 1453, 2113, 2290
BstPAI	GACNNNNGTC	1 cut(s)	2394
BstSCI	CCNGG	4 cut(s)	160, 311, 2122, 2335
BstSLI	GKGCMC	2 cut(s)	1138, 1744
BstV1I	GCAGC	4 cut(s)	376, 1348, 1985, 2396
BstX2I	RGATCY	2 cut(s)	1579, 2056
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	2 cut(s)	1579, 2056
BstZ17I	GTATAC	1 cut(s)	563
BsuRI	GGCC	4 cut(s)	348, 707, 1312, 1968
BtgI	CCRYGG	2 cut(s)	781, 1326
BtsCI	GGATG	5 cut(s)	18, 271, 933, 1263, 1605
BtsI	GCAGTG	4 cut(s)	145, 480, 700, 2423
BtsIMutI	CAGTG	8 cut(s)	145, 192, 480, 700, 828, 1102, 1263, 2423
BveI	ACCTGC	1 cut(s)	481
CaiI	CAGNNNCTG	1 cut(s)	2129
Cfr10I	RCCGGY	1 cut(s)	521
Cfr13I	GGNCC	2 cut(s)	346, 1200
CseI	GACGC	1 cut(s)	881
CsiI	ACCWGGT	1 cut(s)	160
Csp6I	GTAC	8 cut(s)	4, 412, 771, 847, 1109, 1224, 2165, 2341
CspCI	CAANNNNNGTGG	4 cut(s)	421, 456, 587, 622
CviQI	GTAC	8 cut(s)	4, 412, 771, 847, 1109, 1224, 2165, 2341
DdeI	CTNAG	5 cut(s)	748, 1295, 1774, 2007, 2450
DpnI	GATC	5 cut(s)	1476, 1581, 1923, 2058, 2351
DpnII	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
Eam1104I	CTCTTC	1 cut(s)	1803
EarI	CTCTTC	1 cut(s)	1803
Eco130I	CCWWGG	3 cut(s)	232, 781, 1326
Eco147I	AGGCCT	1 cut(s)	1312
Eco32I	GATATC	1 cut(s)	993
Eco47I	GGWCC	1 cut(s)	1200
Eco57I	CTGAAG	3 cut(s)	804, 954, 2208
Eco72I	CACGTG	1 cut(s)	580
EcoRI	GAATTC	2 cut(s)	1528, 1983
EcoRII	CCWGG	4 cut(s)	160, 311, 2122, 2335
EcoRV	GATATC	1 cut(s)	993
EcoT14I	CCWWGG	3 cut(s)	232, 781, 1326
EcoT22I	ATGCAT	2 cut(s)	66, 1273
ErhI	CCWWGG	3 cut(s)	232, 781, 1326
FaqI	GGGAC	1 cut(s)	580
FbaI	TGATCA	1 cut(s)	1921
FblI	GTMKAC	2 cut(s)	166, 562
Fnu4HI	GCNGC	6 cut(s)	222, 349, 390, 1362, 1999, 2385
FokI	GGATG	5 cut(s)	25, 278, 940, 1270, 1612
Fsp4HI	GCNGC	6 cut(s)	222, 349, 390, 1362, 1999, 2385
FspBI	CTAG	6 cut(s)	44, 255, 423, 1487, 1901, 2444
GluI	GCNGC	6 cut(s)	222, 349, 390, 1362, 1999, 2385
GsuI	CTGGAG	2 cut(s)	414, 827
HaeIII	GGCC	4 cut(s)	348, 707, 1312, 1968
HapII	CCGG	1 cut(s)	522
HgaI	GACGC	1 cut(s)	881
HincII	GTYRAC	4 cut(s)	511, 550, 1539, 2359
HindII	GTYRAC	4 cut(s)	511, 550, 1539, 2359
HindIII	AAGCTT	2 cut(s)	1420, 1627
HinfI	GANTC	9 cut(s)	482, 809, 1013, 1687, 1799, 1874, 1911, 2020, 2368
HpaI	GTTAAC	1 cut(s)	1539
HpaII	CCGG	1 cut(s)	522
HphI	GGTGA	5 cut(s)	278, 393, 727, 1315, 2390
Hpy188I	TCNGA	9 cut(s)	751, 871, 1128, 1507, 1723, 2035, 2328, 2487, 2513
Hpy188III	TCNNGA	6 cut(s)	806, 1216, 1464, 1892, 2199, 2444
HpyAV	CCTTC	2 cut(s)	1461, 2492
HpyCH4III	ACNGT	5 cut(s)	302, 320, 1106, 1622, 2345
HpyCH4IV	ACGT	4 cut(s)	565, 579, 833, 2077
HpyF10VI	GCNNNNNNNGC	4 cut(s)	752, 1358, 1739, 2192
HpyF3I	CTNAG	5 cut(s)	748, 1295, 1774, 2007, 2450
HpySE526I	ACGT	4 cut(s)	565, 579, 833, 2077
Ksp22I	TGATCA	1 cut(s)	1921
KspAI	GTTAAC	1 cut(s)	1539
Kzo9I	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
LmnI	GCTCC	2 cut(s)	234, 2153
Lsp1109I	GCAGC	4 cut(s)	376, 1348, 1985, 2396
LweI	GCATC	9 cut(s)	256, 559, 885, 1258, 1504, 1561, 2204, 2257, 2478
MabI	ACCWGGT	1 cut(s)	160
MaeI	CTAG	6 cut(s)	44, 255, 423, 1487, 1901, 2444
MaeII	ACGT	4 cut(s)	565, 579, 833, 2077
MaeIII	GTNAC	6 cut(s)	140, 715, 1045, 1088, 1589, 2396
MalI	GATC	5 cut(s)	1476, 1581, 1923, 2058, 2351
MboI	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
MboII	GAAGA	8 cut(s)	810, 1028, 1580, 1820, 1825, 2201, 2429, 2432
MfeI	CAATTG	1 cut(s)	539
MflI	RGATCY	2 cut(s)	1579, 2056
MhlI	GDGCHC	2 cut(s)	1138, 1744
MlyI	GAGTC	5 cut(s)	818, 1007, 1793, 1868, 2362
MmeI	TCCRAC	3 cut(s)	1485, 1505, 2327
Mph1103I	ATGCAT	2 cut(s)	66, 1273
MseI	TTAA	8 cut(s)	702, 762, 1059, 1251, 1538, 1611, 1704, 1869
MslI	CAYNNNNRTG	4 cut(s)	180, 636, 1598, 1751
MspA1I	CMGCKG	2 cut(s)	1998, 2387
MspCI	CTTAAG	1 cut(s)	1868
MspI	CCGG	1 cut(s)	522
MspR9I	CCNGG	4 cut(s)	162, 313, 2124, 2337
MunI	CAATTG	1 cut(s)	539
Mva1269I	GAATGC	1 cut(s)	814
MvaI	CCWGG	4 cut(s)	162, 313, 2124, 2337
MwoI	GCNNNNNNNGC	4 cut(s)	752, 1358, 1739, 2192
NcoI	CCATGG	2 cut(s)	781, 1326
NdeII	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
NlaIV	GGNNCC	3 cut(s)	96, 2155, 2220
NmuCI	GTSAC	4 cut(s)	140, 715, 1589, 2396
NsiI	ATGCAT	2 cut(s)	66, 1273
NspI	RCATGY	6 cut(s)	138, 185, 241, 1453, 2113, 2290
NspV	TTCGAA	1 cut(s)	2299
PaeI	GCATGC	2 cut(s)	138, 2113
PceI	AGGCCT	1 cut(s)	1312
PctI	GAATGC	1 cut(s)	814
PfeI	GAWTC	4 cut(s)	482, 1687, 1911, 2020
PflMI	CCANNNNNTGG	1 cut(s)	2129
PkrI	GCNGC	6 cut(s)	223, 350, 391, 1363, 2000, 2386
PleI	GAGTC	5 cut(s)	817, 1007, 1793, 1868, 2362
PmaCI	CACGTG	1 cut(s)	580
PmlI	CACGTG	1 cut(s)	580
PpsI	GAGTC	5 cut(s)	817, 1007, 1793, 1868, 2362
Ppu21I	YACGTR	2 cut(s)	566, 580
PshAI	GACNNNNGTC	1 cut(s)	2394
PshBI	ATTAAT	1 cut(s)	762
PsiI	TTATAA	1 cut(s)	2466
Psp6I	CCWGG	4 cut(s)	160, 311, 2122, 2335
PspCI	CACGTG	1 cut(s)	580
PspGI	CCWGG	4 cut(s)	160, 311, 2122, 2335
PspN4I	GGNNCC	3 cut(s)	96, 2155, 2220
PspPI	GGNCC	2 cut(s)	346, 1200
PstNI	CAGNNNCTG	1 cut(s)	2129
PsuI	RGATCY	2 cut(s)	1579, 2056
RsaI	GTAC	8 cut(s)	5, 413, 772, 848, 1110, 1225, 2166, 2342
RsaNI	GTAC	8 cut(s)	4, 412, 771, 847, 1109, 1224, 2165, 2341
RseI	CAYNNNNRTG	4 cut(s)	180, 636, 1598, 1751
SaqAI	TTAA	8 cut(s)	702, 762, 1059, 1251, 1538, 1611, 1704, 1869
SatI	GCNGC	6 cut(s)	222, 349, 390, 1362, 1999, 2385
Sau3AI	GATC	5 cut(s)	1474, 1579, 1921, 2056, 2349
Sau96I	GGNCC	2 cut(s)	346, 1200
SchI	GAGTC	5 cut(s)	818, 1007, 1793, 1868, 2362
ScrFI	CCNGG	4 cut(s)	162, 313, 2124, 2337
SduI	GDGCHC	2 cut(s)	1138, 1744
SexAI	ACCWGGT	1 cut(s)	160
SfaNI	GCATC	9 cut(s)	256, 559, 885, 1258, 1504, 1561, 2204, 2257, 2478
SfuI	TTCGAA	1 cut(s)	2299
SinI	GGWCC	1 cut(s)	1200
SmiMI	CAYNNNNRTG	4 cut(s)	180, 636, 1598, 1751
SmlI	CTYRAG	3 cut(s)	1064, 1400, 1868
SmoI	CTYRAG	3 cut(s)	1064, 1400, 1868
SphI	GCATGC	2 cut(s)	138, 2113
SseBI	AGGCCT	1 cut(s)	1312
SsiI	CCGC	5 cut(s)	222, 349, 713, 1996, 2387
SspI	AATATT	1 cut(s)	1186
SspMI	CTAG	6 cut(s)	44, 255, 423, 1487, 1901, 2444
StuI	AGGCCT	1 cut(s)	1312
StyD4I	CCNGG	4 cut(s)	160, 311, 2122, 2335
StyI	CCWWGG	3 cut(s)	232, 781, 1326
TaaI	ACNGT	5 cut(s)	302, 320, 1106, 1622, 2345
TaiI	ACGT	4 cut(s)	568, 582, 836, 2080
TaqI	TCGA	3 cut(s)	2178, 2299, 2352
TatI	WGTACW	4 cut(s)	3, 411, 846, 1223
TauI	GCSGC	2 cut(s)	224, 351
TfiI	GAWTC	4 cut(s)	482, 1687, 1911, 2020
Tru1I	TTAA	8 cut(s)	702, 762, 1059, 1251, 1538, 1611, 1704, 1869
Tru9I	TTAA	8 cut(s)	702, 762, 1059, 1251, 1538, 1611, 1704, 1869
TscAI	CASTG	8 cut(s)	145, 199, 480, 700, 828, 1109, 1270, 2430
TseFI	GTSAC	4 cut(s)	140, 715, 1589, 2396
TseI	GCWGC	4 cut(s)	389, 1361, 1998, 2384
Tsp45I	GTSAC	4 cut(s)	140, 715, 1589, 2396
TspGWI	ACGGA	3 cut(s)	1029, 1033, 1923
TspRI	CASTG	8 cut(s)	145, 199, 480, 700, 828, 1109, 1270, 2430
Van91I	CCANNNNNTGG	1 cut(s)	2129
Vha464I	CTTAAG	1 cut(s)	1868
VneI	GTGCAC	2 cut(s)	1134, 1740
VpaK11BI	GGWCC	1 cut(s)	1200
VspI	ATTAAT	1 cut(s)	762
XapI	RAATTY	9 cut(s)	1080, 1278, 1303, 1528, 1712, 1983, 2227, 2302, 2331
XbaI	TCTAGA	1 cut(s)	2443
XceI	RCATGY	6 cut(s)	138, 185, 241, 1453, 2113, 2290
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1976
XmiI	GTMKAC	2 cut(s)	166, 562
XspI	CTAG	6 cut(s)	44, 255, 423, 1487, 1901, 2444
Zsp2I	ATGCAT	2 cut(s)	66, 1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.