Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0006849

Physical Location & Seq

Genomic Coordinates Forward (+)

31877260 .. 31879796

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1249500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGTACAATAGATTTATATGTCCAGTCTATAAACATTTCATACACAATACACCACAATGGTCCAAGTCCATACATACAAACTACAAAAACTCCCTTAATTTGGAAGGTGCGTTGGCAAGCCAGTTTCCTTCAATCGTGCAAGCTTGTAGTGATCAGTCTCTTCTCCAGCAAGGTAGACAAGTTCATGCACATGTCATTTGCAGCGGACTTGTGAAAAACAGCCTTGTCGGTACAAAGATCCTGGCTATGATTGGTTTTGGTACTCAACTTCATGGGCTCGTTGTTGCTTGTGGGTTGGAGTCGGATTCTCCAGTGGCTAATACATTGTTAGCAATGTATTCTAAATGCCAGTACTTCTCTGATGCCCGCAAGTTGTTTGATATGATGCCTCGAACTGATTTTGTGACATGGAATGGAATGATATCTGGTTATATACAGAGTGGGTTCATGCTTGAGGCTTCACGTTTGTTTCAGGACATGATATCTACAAGTGTTAAACCTGATTCAATCACATGTGCAAACTTTTTACCTTCTGTTGCTGAACAAGGTAACATGAAGCAGGGTAAGGAAATTCACGGTTACATTGTAAGGCACTGTGTTCCCTTGGATGTGTTTTTGCAAAGTGCACTTACTGATGTATACTTCCAAAATGGCAAACCAGAAGAGGTGGTATATCTATTTCGTCAAATGGGGATGGGAGGTGTCAAATATGACTGTGTAAGCATTTCAGCTGGGCTATTTGCATGTGCAAATTTGCCAGCATTTCATTACGGGAAAGAGATCCATAGTTTCATGATTAGAAATGCATTTAGCCCTGATCTGTTTGCTGAGAGTGCACTGATAGACATGTATGCCAAATGTGGAAACTTAGATCTTGCTCGCCGTGTGTTTGACATGATGGAAGAGAAGAATGAAGTTTCGTGGAACATCATCATTTCTGCTTATGGGAACCACGGTCACCTTAAGGAATCTCTTGTTCTATTTCATGAAATGTTGGGTAATGGGATCTTGCCTGATCATGCGCAGGTTGATGATGGAATTCTCTACTTCCGTTCCATGATTGAGGAATATGGGATCCTAGCTAGGTTGGAGCATTATGCTTGCATGGTAGATCTGTTAGGGCGTATTGGACATTTACATGAAGCATTAGAAACAATAAAGAGCATGCCATTCTCCCCAGATTCTGGTGTCTGGGGAACAATGCTTGGAGCGTGTCGGCTCCATGGCAATGTTGAGCTTGCAGAAGAGGTATCAAGATATCTTTTTGAATTGGCACCTCAAAATTCTGGCCATTATATACTCTTATCAAATATACTTGCTGATGCTGGAAAATGGGGGAGTGTGCTTAAGGTTCGAACTCTGATGAAAAACAGAGAAGTTCAAAAGGTTCCTGGGTACAGTTGGATTGAGGTAAACAACAACACTCATATGTTTGTTGCAGCAGATGGGAGTCACCCAGAGTCTGCTCAGATATATTCATTGCTCAACAGTCTTCTTCTAGAACTAAGAAAAGAGGGTTATAATCCAAGACATTACCTTCCAATGCATCCACAAACGTTGGGGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

523

Amino Acids

58.46

Weight (kDa)

6.28

Isoelectric Point (pI)

43.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	133 - 171	5.1e-08	PPR repeat family
PPR	PF01535	135 - 162	1.2e-06	PPR repeat
PPR_2	PF13041	304 - 340	4.5e-08	PPR repeat family
PPR	PF01535	306 - 336	1.9e-07	PPR repeat
E_motif	PF20431	408 - 470	2.7e-19	E motif
Eplus_motif	PF20430	475 - 500	3.5e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21300
fragaria_vesca	FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440
malus_domestica	MD09G1249500.v1.1 MD17G1242300.v1.1
prunus_persica	Prupe.3G135500_v2.0.a1
pyrus_communis	pycom09g16630 pycom17g24490 pycom17g24500
rosa_chinensis	RchiOBHm_Chr7g0222301
rosa_laevigata	RLG00000002074
rosa_multiflora	Rmu_sc0007069.1_g000017
rosa_roxburghii	Rroxscaffold_3G00237140
rosa_rugosa	Rorug07G0207300 Rorug07G0207300 Rorug07G0207300 Rorug07G0207400 Rorug07G0207500
rosa_samantha	Rh7AG349000 Rh7BG339300 Rh7CG366400 Rh7DG345900
rosa_wichuraiana	Rw7G029520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1521
Acc16I	TGCGCA	1 cut(s)	1023
Acc36I	ACCTGC	1 cut(s)	1015
AccB1I	GGYRCC	1 cut(s)	1273
AccB7I	CCANNNNNTGG	1 cut(s)	1184
AccI	GTMKAC	2 cut(s)	175, 639
AciI	CCGC	2 cut(s)	204, 367
AclI	AACGTT	1 cut(s)	1556
AclWI	GGATC	5 cut(s)	232, 775, 1013, 1069, 1082
AcoI	YGGCCR	1 cut(s)	1288
AcsI	RAATTY	4 cut(s)	570, 751, 1038, 1282
AfaI	GTAC	5 cut(s)	5, 232, 262, 353, 1397
AfiI	CCNNNNNNNGG	2 cut(s)	100, 1184
AflII	CTTAAG	2 cut(s)	962, 1346
AflIII	ACRYGT	3 cut(s)	190, 512, 846
AgsI	TTSAA	4 cut(s)	132, 507, 1268, 1382
AjnI	CCWGG	2 cut(s)	240, 1390
AluBI	AGCT	4 cut(s)	143, 731, 1082, 1237
AluI	AGCT	4 cut(s)	143, 731, 1082, 1237
Alw21I	GWGCWC	2 cut(s)	628, 838
Alw26I	GTCTC	1 cut(s)	162
Alw44I	GTGCAC	2 cut(s)	624, 834
AlwI	GGATC	5 cut(s)	232, 775, 1013, 1069, 1082
AlwNI	CAGNNNCTG	2 cut(s)	1184, 1463
AoxI	GGCC	1 cut(s)	1288
ApaLI	GTGCAC	2 cut(s)	624, 834
ApeKI	GCWGC	2 cut(s)	201, 1439
ApoI	RAATTY	4 cut(s)	570, 751, 1038, 1282
AspLEI	GCGC	1 cut(s)	1024
AspS9I	GGNCC	1 cut(s)	60
AsuHPI	GGTGA	2 cut(s)	950, 1445
AsuII	TTCGAA	1 cut(s)	1354
AvaII	GGWCC	1 cut(s)	60
BaeGI	GKGCMC	2 cut(s)	628, 838
BalI	TGGCCA	1 cut(s)	1290
BamHI	GGATCC	1 cut(s)	1074
BanI	GGYRCC	1 cut(s)	1273
BanII	GRGCYC	1 cut(s)	279
BbsI	GAAGAC	1 cut(s)	1484
Bbv12I	GWGCWC	2 cut(s)	628, 838
BbvI	GCAGC	2 cut(s)	213, 1451
BccI	CCATC	4 cut(s)	688, 892, 1028, 1439
BceAI	ACGGC	1 cut(s)	867
BciT130I	CCWGG	2 cut(s)	242, 1392
BclI	TGATCA	2 cut(s)	151, 1015
BcoDI	GTCTC	1 cut(s)	162
BfaI	CTAG	3 cut(s)	1079, 1083, 1499
BfrI	CTTAAG	2 cut(s)	962, 1346
BfuAI	ACCTGC	1 cut(s)	1015
BglII	AGATCT	2 cut(s)	871, 1111
BisI	GCNGC	2 cut(s)	202, 1440
BlsI	GCNGC	2 cut(s)	203, 1441
BmcAI	AGTACT	1 cut(s)	353
Bme1390I	CCNGG	2 cut(s)	242, 1392
Bme18I	GGWCC	1 cut(s)	60
BmgT120I	GGNCC	1 cut(s)	60
BmiI	GGNNCC	5 cut(s)	950, 1076, 1220, 1275, 1389
BmrFI	CCNGG	2 cut(s)	242, 1392
BmsI	GCATC	4 cut(s)	352, 375, 1312, 1555
BpiI	GAAGAC	1 cut(s)	1484
BpmI	CTGGAG	2 cut(s)	149, 294
Bpu14I	TTCGAA	1 cut(s)	1354
BpuEI	CTTGAG	1 cut(s)	473
BsaJI	CCNNGG	4 cut(s)	603, 952, 1222, 1391
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bsc4I	CCNNNNNNNGG	2 cut(s)	100, 1184
Bse1I	ACTGG	4 cut(s)	23, 121, 311, 349
Bse3DI	GCAATG	3 cut(s)	339, 1234, 1478
BseBI	CCWGG	2 cut(s)	242, 1392
BseDI	CCNNGG	4 cut(s)	603, 952, 1222, 1391
BseGI	GGATG	3 cut(s)	613, 699, 1546
BseLI	CCNNNNNNNGG	2 cut(s)	100, 1184
BseMI	GCAATG	3 cut(s)	339, 1234, 1478
BseMII	CTCAG	2 cut(s)	819, 1481
BseNI	ACTGG	4 cut(s)	23, 121, 311, 349
BseSI	GKGCMC	2 cut(s)	628, 838
BseXI	GCAGC	2 cut(s)	213, 1451
BseYI	CCCAGC	1 cut(s)	731
BshFI	GGCC	1 cut(s)	1290
BshNI	GGYRCC	1 cut(s)	1273
BsiHKAI	GWGCWC	2 cut(s)	628, 838
BslI	CCNNNNNNNGG	2 cut(s)	100, 1184
BsmAI	GTCTC	1 cut(s)	162
BsnI	GGCC	1 cut(s)	1290
Bsp119I	TTCGAA	1 cut(s)	1354
Bsp1286I	GDGCHC	3 cut(s)	279, 628, 838
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
Bsp19I	CCATGG	1 cut(s)	1222
BspACI	CCGC	2 cut(s)	204, 367
BspANI	GGCC	1 cut(s)	1290
BspCNI	CTCAG	2 cut(s)	820, 1480
BspHI	TCATGA	2 cut(s)	792, 985
BspLI	GGNNCC	5 cut(s)	950, 1076, 1220, 1275, 1389
BspMI	ACCTGC	1 cut(s)	1015
BspPI	GGATC	5 cut(s)	232, 775, 1013, 1069, 1082
BspT104I	TTCGAA	1 cut(s)	1354
BspT107I	GGYRCC	1 cut(s)	1273
BspTI	CTTAAG	2 cut(s)	962, 1346
BsrDI	GCAATG	3 cut(s)	339, 1234, 1478
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	4 cut(s)	23, 121, 311, 349
BssECI	CCNNGG	4 cut(s)	603, 952, 1222, 1391
BssMI	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
BssNAI	GTATAC	1 cut(s)	640
BssT1I	CCWWGG	2 cut(s)	603, 1222
Bst1107I	GTATAC	1 cut(s)	640
Bst2UI	CCWGG	2 cut(s)	242, 1392
Bst4CI	ACNGT	6 cut(s)	578, 596, 716, 956, 1400, 1490
Bst6I	CTCTTC	4 cut(s)	165, 657, 897, 1239
BstAFI	CTTAAG	2 cut(s)	962, 1346
BstAUI	TGTACA	1 cut(s)	3
BstBI	TTCGAA	1 cut(s)	1354
BstC8I	GCNNGC	8 cut(s)	118, 141, 367, 759, 880, 1102, 1166, 1239
BstDEI	CTNAG	4 cut(s)	828, 868, 1467, 1505
BstDSI	CCRYGG	2 cut(s)	952, 1222
BstEII	GGTNACC	1 cut(s)	956
BstF5I	GGATG	3 cut(s)	613, 699, 1546
BstHHI	GCGC	1 cut(s)	1024
BstKTI	GATC	9 cut(s)	154, 240, 783, 820, 874, 1008, 1018, 1077, 1114
BstMAI	GTCTC	1 cut(s)	162
BstMBI	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
BstMWI	GCNNNNNNNGC	1 cut(s)	833
BstNI	CCWGG	2 cut(s)	242, 1392
BstNSI	RCATGY	5 cut(s)	194, 516, 747, 850, 1168
BstPI	GGTNACC	1 cut(s)	956
BstSCI	CCNGG	2 cut(s)	240, 1390
BstSLI	GKGCMC	2 cut(s)	628, 838
BstV1I	GCAGC	2 cut(s)	213, 1451
BstV2I	GAAGAC	1 cut(s)	1484
BstX2I	RGATCY	6 cut(s)	237, 780, 871, 1005, 1074, 1111
BstYI	RGATCY	6 cut(s)	237, 780, 871, 1005, 1074, 1111
BstZ17I	GTATAC	1 cut(s)	640
BsuRI	GGCC	1 cut(s)	1290
BtgI	CCRYGG	2 cut(s)	952, 1222
BtsCI	GGATG	3 cut(s)	613, 699, 1546
BtsIMutI	CAGTG	3 cut(s)	318, 592, 836
BveI	ACCTGC	1 cut(s)	1015
Cac8I	GCNNGC	8 cut(s)	118, 141, 367, 759, 880, 1102, 1166, 1239
CaiI	CAGNNNCTG	2 cut(s)	1184, 1463
CciI	TCATGA	2 cut(s)	792, 985
CfoI	GCGC	1 cut(s)	1024
Cfr13I	GGNCC	1 cut(s)	60
Csp6I	GTAC	5 cut(s)	4, 231, 261, 352, 1396
CspCI	CAANNNNNGTGG	1 cut(s)	1539
CviQI	GTAC	5 cut(s)	4, 231, 261, 352, 1396
DdeI	CTNAG	4 cut(s)	828, 868, 1467, 1505
DpnI	GATC	9 cut(s)	153, 239, 782, 819, 873, 1007, 1017, 1076, 1113
DpnII	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
EaeI	YGGCCR	1 cut(s)	1288
Eam1104I	CTCTTC	4 cut(s)	165, 657, 897, 1239
EarI	CTCTTC	4 cut(s)	165, 657, 897, 1239
Eco130I	CCWWGG	2 cut(s)	603, 1222
Eco24I	GRGCYC	1 cut(s)	279
Eco32I	GATATC	3 cut(s)	423, 483, 1259
Eco47I	GGWCC	1 cut(s)	60
Eco91I	GGTNACC	1 cut(s)	956
EcoO65I	GGTNACC	1 cut(s)	956
EcoRI	GAATTC	1 cut(s)	1038
EcoRII	CCWGG	2 cut(s)	240, 1390
EcoRV	GATATC	3 cut(s)	423, 483, 1259
EcoT14I	CCWWGG	2 cut(s)	603, 1222
EcoT22I	ATGCAT	2 cut(s)	808, 1548
EcoT38I	GRGCYC	1 cut(s)	279
ErhI	CCWWGG	2 cut(s)	603, 1222
FauI	CCCGC	1 cut(s)	374
FauNDI	CATATG	1 cut(s)	1428
FbaI	TGATCA	2 cut(s)	151, 1015
FblI	GTMKAC	2 cut(s)	175, 639
Fnu4HI	GCNGC	2 cut(s)	202, 1440
FokI	GGATG	3 cut(s)	620, 706, 1533
FriOI	GRGCYC	1 cut(s)	279
Fsp4HI	GCNGC	2 cut(s)	202, 1440
FspBI	CTAG	3 cut(s)	1079, 1083, 1499
FspI	TGCGCA	1 cut(s)	1023
GlaI	GCGC	1 cut(s)	1023
GluI	GCNGC	2 cut(s)	202, 1440
GsaI	CCCAGC	1 cut(s)	735
GsuI	CTGGAG	2 cut(s)	149, 294
HaeIII	GGCC	1 cut(s)	1290
HhaI	GCGC	1 cut(s)	1024
Hin6I	GCGC	1 cut(s)	1022
HinP1I	GCGC	1 cut(s)	1022
HindIII	AAGCTT	1 cut(s)	141
HinfI	GANTC	7 cut(s)	299, 305, 503, 968, 1181, 1450, 1460
HphI	GGTGA	2 cut(s)	950, 1445
Hpy166II	GTNNAC	5 cut(s)	176, 626, 640, 836, 1414
Hpy188I	TCNGA	4 cut(s)	304, 361, 1362, 1470
Hpy188III	TCNNGA	5 cut(s)	473, 793, 986, 1254, 1499
Hpy8I	GTNNAC	5 cut(s)	176, 626, 640, 836, 1414
HpyAV	CCTTC	4 cut(s)	98, 138, 540, 1547
HpyCH4III	ACNGT	6 cut(s)	578, 596, 716, 956, 1400, 1490
HpyCH4IV	ACGT	2 cut(s)	463, 1556
HpyF10VI	GCNNNNNNNGC	1 cut(s)	833
HpyF3I	CTNAG	4 cut(s)	828, 868, 1467, 1505
HpySE526I	ACGT	2 cut(s)	463, 1556
HspAI	GCGC	1 cut(s)	1022
Ksp22I	TGATCA	2 cut(s)	151, 1015
Kzo9I	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
LmnI	GCTCC	3 cut(s)	1090, 1208, 1224
Lsp1109I	GCAGC	2 cut(s)	213, 1451
LweI	GCATC	4 cut(s)	352, 375, 1312, 1555
MaeI	CTAG	3 cut(s)	1079, 1083, 1499
MaeII	ACGT	2 cut(s)	463, 1556
MaeIII	GTNAC	5 cut(s)	403, 548, 578, 956, 1451
MalI	GATC	9 cut(s)	153, 239, 782, 819, 873, 1007, 1017, 1076, 1113
MboI	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
MboII	GAAGA	7 cut(s)	152, 674, 914, 919, 1256, 1484, 1487
MflI	RGATCY	6 cut(s)	237, 780, 871, 1005, 1074, 1111
MhlI	GDGCHC	3 cut(s)	279, 628, 838
MlsI	TGGCCA	1 cut(s)	1290
MluCI	AATT	6 cut(s)	97, 570, 751, 1038, 1268, 1282
MluNI	TGGCCA	1 cut(s)	1290
MlyI	GAGTC	3 cut(s)	308, 1459, 1469
MmeI	TCCRAC	4 cut(s)	276, 282, 1068, 1382
MnlI	CCTC	9 cut(s)	399, 448, 658, 692, 1057, 1240, 1287, 1402, 1507
Mox20I	TGGCCA	1 cut(s)	1290
Mph1103I	ATGCAT	2 cut(s)	808, 1548
MscI	TGGCCA	1 cut(s)	1290
MseI	TTAA	4 cut(s)	96, 495, 963, 1347
MslI	CAYNNNNRTG	5 cut(s)	55, 189, 1137, 1227, 1427
Msp20I	TGGCCA	1 cut(s)	1290
MspA1I	CMGCKG	2 cut(s)	204, 731
MspCI	CTTAAG	2 cut(s)	962, 1346
MspR9I	CCNGG	2 cut(s)	242, 1392
MvaI	CCWGG	2 cut(s)	242, 1392
MwoI	GCNNNNNNNGC	1 cut(s)	833
NcoI	CCATGG	1 cut(s)	1222
NdeI	CATATG	1 cut(s)	1428
NdeII	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
NlaIV	GGNNCC	5 cut(s)	950, 1076, 1220, 1275, 1389
NmuCI	GTSAC	3 cut(s)	403, 956, 1451
NsbI	TGCGCA	1 cut(s)	1023
NsiI	ATGCAT	2 cut(s)	808, 1548
NspI	RCATGY	5 cut(s)	194, 516, 747, 850, 1168
NspV	TTCGAA	1 cut(s)	1354
PaeI	GCATGC	1 cut(s)	1168
PagI	TCATGA	2 cut(s)	792, 985
PciI	ACATGT	3 cut(s)	190, 512, 846
PfeI	GAWTC	4 cut(s)	305, 503, 968, 1181
PflMI	CCANNNNNTGG	1 cut(s)	1184
PkrI	GCNGC	2 cut(s)	203, 1441
PleI	GAGTC	3 cut(s)	307, 1458, 1468
PpsI	GAGTC	3 cut(s)	307, 1458, 1468
PscI	ACATGT	3 cut(s)	190, 512, 846
PsiI	TTATAA	1 cut(s)	1521
Psp1406I	AACGTT	1 cut(s)	1556
Psp6I	CCWGG	2 cut(s)	240, 1390
PspEI	GGTNACC	1 cut(s)	956
PspFI	CCCAGC	1 cut(s)	731
PspGI	CCWGG	2 cut(s)	240, 1390
PspN4I	GGNNCC	5 cut(s)	950, 1076, 1220, 1275, 1389
PspPI	GGNCC	1 cut(s)	60
PstNI	CAGNNNCTG	2 cut(s)	1184, 1463
PsuI	RGATCY	6 cut(s)	237, 780, 871, 1005, 1074, 1111
PvuII	CAGCTG	1 cut(s)	731
RsaI	GTAC	5 cut(s)	5, 232, 262, 353, 1397
RsaNI	GTAC	5 cut(s)	4, 231, 261, 352, 1396
RseI	CAYNNNNRTG	5 cut(s)	55, 189, 1137, 1227, 1427
SaqAI	TTAA	4 cut(s)	96, 495, 963, 1347
SatI	GCNGC	2 cut(s)	202, 1440
Sau3AI	GATC	9 cut(s)	151, 237, 780, 817, 871, 1005, 1015, 1074, 1111
Sau96I	GGNCC	1 cut(s)	60
ScaI	AGTACT	1 cut(s)	353
SchI	GAGTC	3 cut(s)	308, 1459, 1469
ScrFI	CCNGG	2 cut(s)	242, 1392
SduI	GDGCHC	3 cut(s)	279, 628, 838
SfaNI	GCATC	4 cut(s)	352, 375, 1312, 1555
SfuI	TTCGAA	1 cut(s)	1354
SinI	GGWCC	1 cut(s)	60
SmiMI	CAYNNNNRTG	5 cut(s)	55, 189, 1137, 1227, 1427
SmlI	CTYRAG	3 cut(s)	452, 962, 1346
SmoI	CTYRAG	3 cut(s)	452, 962, 1346
SphI	GCATGC	1 cut(s)	1168
Sse9I	AATT	6 cut(s)	97, 570, 751, 1038, 1268, 1282
SsiI	CCGC	2 cut(s)	204, 367
SspMI	CTAG	3 cut(s)	1079, 1083, 1499
StyD4I	CCNGG	2 cut(s)	240, 1390
StyI	CCWWGG	2 cut(s)	603, 1222
TaaI	ACNGT	6 cut(s)	578, 596, 716, 956, 1400, 1490
TaiI	ACGT	2 cut(s)	466, 1559
TaqI	TCGA	2 cut(s)	391, 1354
TasI	AATT	6 cut(s)	97, 570, 751, 1038, 1268, 1282
TatI	WGTACW	2 cut(s)	3, 351
TfiI	GAWTC	4 cut(s)	305, 503, 968, 1181
Tru1I	TTAA	4 cut(s)	96, 495, 963, 1347
Tru9I	TTAA	4 cut(s)	96, 495, 963, 1347
TscAI	CASTG	3 cut(s)	318, 599, 843
TseFI	GTSAC	3 cut(s)	403, 956, 1451
TseI	GCWGC	2 cut(s)	201, 1439
Tsp45I	GTSAC	3 cut(s)	403, 956, 1451
TspGWI	ACGGA	1 cut(s)	1040
TspRI	CASTG	3 cut(s)	318, 599, 843
Van91I	CCANNNNNTGG	1 cut(s)	1184
Vha464I	CTTAAG	2 cut(s)	962, 1346
VneI	GTGCAC	2 cut(s)	624, 834
VpaK11BI	GGWCC	1 cut(s)	60
XapI	RAATTY	4 cut(s)	570, 751, 1038, 1282
XbaI	TCTAGA	1 cut(s)	1498
XceI	RCATGY	5 cut(s)	194, 516, 747, 850, 1168
XmiI	GTMKAC	2 cut(s)	175, 639
XspI	CTAG	3 cut(s)	1079, 1083, 1499
ZrmI	AGTACT	1 cut(s)	353
Zsp2I	ATGCAT	2 cut(s)	808, 1548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.