RchiOBHm_Chr7g0222301

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0006849
Physical Location & Seq
Forward (+)
43651455 .. 43657747
6293 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19895

Sequence Viewer

Length: 2514 bp
ATGTACAGGAGGATGTTATGTTCATTTTATAGACCCTTTACACCACAAAACTCCAAGTCCATACATACAAACGCCAACTACTTCCTCAACTTGGAAGCAGCTTTGGCGACCCAATTTGATACTATGTTGCAAGCATGCAGTGATCATTCTTTTATTCAACAAGGTAGACAAGTTCATTCACATGCTATTTGCACTGGGCTTATCGAAAATAGTCTTGTCGCCGCAAAGCTGCTTGGCATGTATTTCCATTGTGCTAGTGTTGTGGATGCCAAGAACGTGTTCTATCAGCTTGATTTAAAGTATAGTTTTCCCTGGAACTGTATGATTAGAGGGTTTAGTATAATGGGCCGCTTCGAATTTGCCTTGCTATTTTACTTTAAGATGTTGGCTGCTGGAGTTTCACCTGACAAGTACACTTTTCCCAGTGTAATCAAGGCTTGTGGTGGTTTGAATAATGTGAGATTGGGTAAAGCAGTGCATGATTCAATGCAGTTCATGGGTTTTGAGGTGGATATATACGCCGGTAGTTCTTTACTTCAATTGTATGTCAACAATGGCTGTATCCATGATGCACGCCGCTTGTTTGATAAAATGTCCCACAAAGATTGTGTTTCATGGAATGTCCTGCTTCATGGATATGTTAAAAAGGGGGAATTAAGTAATGCTGTTGGTATATTCATGGAAATGAGGAGTAGTGAAATTAAGGCCAATGCAGTGACATTTTCTTGCATTTTGTCTGTTTGTGCCTCAGAAGCAATGATTAGTTTTGGTACTCAACTTCATGCGTTAGTTGTTGCTTATGGTCTGGAGTCGCATTTTTCAGTGGCTAATACTTTGATAGCGGTCTACTCTAAATGTCATTGCTTGTCTGACGCTCGTACGTTGTTTGATATGATGCCACGAACTGATTTAGTGAGATGGAATGGGATGATATCTGGTTATATACAAAATGGGTTTATGAGTGAGGCTTCACATTTATTTAAAGAGATGATATCTGCTGGTGTCAAACCTGACTCCATCACATTGGCAAGTTTTCTTCCGTCGGTTGCTCAACCGGCTAACCTCAAGCAAGCTAAAGAAATCCACGGTTACATTATTAGACATTGTGTACCTTTTGATGTGTATTTGAAAAGTGCACTTACCGATGTATACTCCAAGTGCAGAAGTGTGGAGATGGCACGCAATATTTTCAACCAAAGTACCAGAACTGATGTCGTGATGTGCACTGCTATGGTTTCAGGGCTTGTCCTTAATGGGATGAATACTGATGCATTGGAAATTTTTAGATGGATGCTTCGAGAGAAATTGAGGCCAAATACTCTTACCATGGCAAGTGTTCTTCCAGCTTGTGCTGGTCTAGCTGCTTTGAAATTGGGAAAGGAATTGCATGGCAATATCCTGAAGCACGGGCTTGATAAAAGCTTTCATGTGGGTAGTGCCCTTACTGGCATGTATGCAAAATCTGGAAGGCTGGATCTTGCTCATCAAGTTTTCCAAAGACTGTCAGAAAGAGATGCGATCTGTTGGAACTCGATGTTAACAAGCTATTCTCAAAATGGTAAACCAGAAGAGGCCATTGATCTGTTTCGTCAAATGGGGATGGGAGGTGTAAAGTATGACTGTGTAAGCATTTCAGCTGCACTTTCTGCTTCTGCAAACTTACCAGCACTTCATTATGGGAAAGAGATTCATGGTTTCATTACTAAAAGTGAATTTAGCTCTGATATTTTTGCCGAGAGTGCACTCATAGACATGTATGCCAAATGTGGAAACTTAGTTCTTGCTCGCCGTGTATTTGACTTAATGGAAGAGAAAAATGAAGTTTCATGGAACAGCATTATTTCTGCTTATGGTTATCACGGTCGCCTCAAGGACTCTCTTGTTCTGTTCCGTGATATGCTTGATAATGGAATCCTACCTGATCATGTCACCTTTCTTGGTGTGTTATCTGCTTGTGTCCATGCAGGCCAAGTTGATGATGGAATGCTCTACTTCCGTTGCATGACCGAGGAATATGGGATCCCAGCTTGGTCAGAGCATTATGCCCTCATGGTAGATCTACTTGGGCGTGCTGGACGGTTACACGAAGCATTTGAAACAATAAAGAGCATGCCATTCTCCCCAGGTTCTGGTGTCTGGGGAACATTGCTTGGAGCATGTCGGGTACATGGCAATATTCAGCTTGCTGAAGAAGCATCAAGACATCTTTTTGACCTGGAACCACACAATTCTGGCTATTATATGTTACTCGCAAATATATATGCTGATGCTGGACAATGGGAGAATGTGCGTAAGGTTCGAAATTTGATGAATGAAAGAGGAGTTCAGAAAATTCCTGGGTACAGTTGGATCGAGGTCAACAACAAGACTCATGTATTTGTTGCAGCAGACAGAAGTCACCCGCAATCTGCTAAATTACATTCACTGCTCAACATTCTTCTTCTAGAGCTGAGAAAAGAGGGTTATAATCCTCAATTTTACCTTCCAATGCACCCACAGACAAAGGGTATTTGA

Protein Analysis

837

Amino Acids

93.54

Weight (kDa)

8.1

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 105 - 147 7.5e-07 PPR repeat family
PPR_2 PF13041 202 - 249 3.2e-11 PPR repeat family
PPR_3 PF13812 202 - 249 3.9e-07 Pentatricopeptide repeat domain
PPR PF01535 204 - 232 2e-06 PPR repeat
PPR_2 PF13041 303 - 342 2.9e-08 PPR repeat family
PPR PF01535 307 - 335 4.2e-07 PPR repeat
PPR_3 PF13812 395 - 451 7.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 404 - 451 3.2e-06 PPR repeat family
PPR_2 PF13041 505 - 550 6.2e-08 PPR repeat family
PPR PF01535 508 - 534 1e-07 PPR repeat
PPR_2 PF13041 606 - 653 3.8e-10 PPR repeat family
PPR PF01535 608 - 638 2.7e-06 PPR repeat
E_motif PF20431 723 - 785 3.1e-20 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2466
AccB7I CCANNNNNTGG 1 cut(s) 2129
AccI GTMKAC 3 cut(s) 166, 846, 1149
AciI CCGC 5 cut(s) 222, 349, 577, 842, 2402
AclWI GGATC 4 cut(s) 1482, 2014, 2027, 2357
AcsI RAATTY 5 cut(s) 356, 1278, 1712, 2302, 2331
AcuI CTGAAG 2 cut(s) 1421, 2208
AfaI GTAC 8 cut(s) 5, 413, 772, 880, 1110, 1201, 2166, 2342
AfiI CCNNNNNNNGG 2 cut(s) 91, 2129
AflIII ACRYGT 2 cut(s) 276, 1752
AgsI TTSAA 8 cut(s) 158, 451, 486, 539, 1129, 1192, 1369, 2096
AjnI CCWGG 4 cut(s) 311, 2122, 2214, 2335
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
AloI GAACNNNNNNTCC 3 cut(s) 36, 1761, 1793
Alw21I GWGCWC 3 cut(s) 1138, 1226, 1744
Alw44I GTGCAC 3 cut(s) 1134, 1222, 1740
AlwI GGATC 4 cut(s) 1482, 2014, 2027, 2357
AlwNI CAGNNNCTG 1 cut(s) 2129
AoxI GGCC 5 cut(s) 346, 705, 1310, 1572, 1966
ApaLI GTGCAC 3 cut(s) 1134, 1222, 1740
ApeKI GCWGC 6 cut(s) 98, 229, 389, 1361, 1637, 2384
ApoI RAATTY 5 cut(s) 356, 1278, 1712, 2302, 2331
Asp700I GAANNNNTTC 1 cut(s) 278
AspS9I GGNCC 1 cut(s) 346
AsuHPI GGTGA 3 cut(s) 393, 1921, 2390
AsuII TTCGAA 2 cut(s) 354, 2299
BaeGI GKGCMC 4 cut(s) 1138, 1226, 1441, 1744
BaeI ACNNNNGTAYC 2 cut(s) 1183, 1216
BamHI GGATCC 1 cut(s) 2019
Bbv12I GWGCWC 3 cut(s) 1138, 1226, 1744
BbvI GCAGC 6 cut(s) 110, 216, 376, 1348, 1624, 2396
BccI CCATC 6 cut(s) 912, 1025, 1168, 1281, 1594, 1973
BceAI ACGGC 1 cut(s) 1773
BciT130I CCWGG 4 cut(s) 313, 2124, 2216, 2337
BciVI GTATCC 1 cut(s) 572
BclI TGATCA 2 cut(s) 142, 1921
BfaI CTAG 3 cut(s) 255, 1358, 2444
BfuI GTATCC 1 cut(s) 572
BglII AGATCT 1 cut(s) 2056
BisI GCNGC 9 cut(s) 99, 222, 230, 349, 390, 577, 1362, 1638, 2385
BlsI GCNGC 9 cut(s) 100, 223, 231, 350, 391, 578, 1363, 1639, 2386
Bme1390I CCNGG 4 cut(s) 313, 2124, 2216, 2337
BmgT120I GGNCC 1 cut(s) 346
BmiI GGNNCC 2 cut(s) 2021, 2220
BmrFI CCNGG 4 cut(s) 313, 2124, 2216, 2337
BmrI ACTGGG 2 cut(s) 204, 417
BmsI GCATC 8 cut(s) 256, 559, 885, 1258, 1281, 1504, 2204, 2257
BmuI ACTGGG 2 cut(s) 204, 417
BoxI GACNNNNGTC 1 cut(s) 2394
BpmI CTGGAG 2 cut(s) 414, 827
Bpu14I TTCGAA 2 cut(s) 354, 2299
BpuEI CTTGAG 2 cut(s) 1049, 1853
BsaJI CCNNGG 6 cut(s) 311, 1084, 1326, 2007, 2122, 2336
Bsc4I CCNNNNNNNGG 2 cut(s) 91, 2129
Bse118I RCCGGY 2 cut(s) 521, 1054
Bse1I ACTGG 3 cut(s) 199, 423, 1450
Bse3DI GCAATG 3 cut(s) 762, 859, 2144
BseBI CCWGG 4 cut(s) 313, 2124, 2216, 2337
BseDI CCNNGG 6 cut(s) 311, 1084, 1326, 2007, 2122, 2336
BseGI GGATG 6 cut(s) 18, 271, 933, 1263, 1296, 1605
BseLI CCNNNNNNNGG 2 cut(s) 91, 2129
BseMI GCAATG 3 cut(s) 762, 859, 2144
BseMII CTCAG 2 cut(s) 762, 2441
BseNI ACTGG 3 cut(s) 199, 423, 1450
BseRI GAGGAG 2 cut(s) 703, 2334
BseSI GKGCMC 4 cut(s) 1138, 1226, 1441, 1744
BseXI GCAGC 6 cut(s) 110, 216, 376, 1348, 1624, 2396
BseYI CCCAGC 1 cut(s) 2023
BsgI GTGCAG 2 cut(s) 1180, 1623
Bsh1285I CGRYCG 1 cut(s) 1864
BshFI GGCC 5 cut(s) 348, 707, 1312, 1574, 1968
BsiEI CGRYCG 1 cut(s) 1864
BsiHKAI GWGCWC 3 cut(s) 1138, 1226, 1744
BsiSI CCGG 2 cut(s) 522, 1055
BsiWI CGTACG 1 cut(s) 878
BslFI GGGAC 1 cut(s) 580
BslI CCNNNNNNNGG 2 cut(s) 91, 2129
BsmFI GGGAC 1 cut(s) 580
BsmI GAATGC 1 cut(s) 1989
BsnI GGCC 5 cut(s) 348, 707, 1312, 1574, 1968
Bsp119I TTCGAA 2 cut(s) 354, 2299
Bsp1286I GDGCHC 4 cut(s) 1138, 1226, 1441, 1744
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
Bsp19I CCATGG 1 cut(s) 1326
BspACI CCGC 5 cut(s) 222, 349, 577, 842, 2402
BspANI GGCC 5 cut(s) 348, 707, 1312, 1574, 1968
BspCNI CTCAG 2 cut(s) 761, 2442
BspLI GGNNCC 2 cut(s) 2021, 2220
BspPI GGATC 4 cut(s) 1482, 2014, 2027, 2357
BspT104I TTCGAA 2 cut(s) 354, 2299
BsrDI GCAATG 3 cut(s) 762, 859, 2144
BsrFI RCCGGY 2 cut(s) 521, 1054
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 3 cut(s) 199, 423, 1450
BssAI RCCGGY 2 cut(s) 521, 1054
BssECI CCNNGG 6 cut(s) 311, 1084, 1326, 2007, 2122, 2336
BssMI GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
BssNAI GTATAC 1 cut(s) 1150
BssT1I CCWWGG 1 cut(s) 1326
Bst1107I GTATAC 1 cut(s) 1150
Bst2UI CCWGG 4 cut(s) 313, 2124, 2216, 2337
Bst4CI ACNGT 7 cut(s) 320, 1088, 1503, 1622, 1862, 2079, 2345
Bst6I CTCTTC 2 cut(s) 1563, 1803
BstAPI GCANNNNNTGC 1 cut(s) 1646
BstAUI TGTACA 1 cut(s) 3
BstBI TTCGAA 2 cut(s) 354, 2299
BstDEI CTNAG 3 cut(s) 748, 1774, 2450
BstDSI CCRYGG 2 cut(s) 1084, 1326
BstF5I GGATG 6 cut(s) 18, 271, 933, 1263, 1296, 1605
BstKTI GATC 8 cut(s) 145, 1477, 1521, 1582, 1924, 2022, 2059, 2352
BstMBI GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
BstMCI CGRYCG 1 cut(s) 1864
BstMWI GCNNNNNNNGC 7 cut(s) 104, 752, 1055, 1358, 1646, 1739, 2192
BstNI CCWGG 4 cut(s) 313, 2124, 2216, 2337
BstNSI RCATGY 7 cut(s) 138, 185, 241, 1453, 1756, 2113, 2160
BstPAI GACNNNNGTC 1 cut(s) 2394
BstSCI CCNGG 4 cut(s) 311, 2122, 2214, 2335
BstSLI GKGCMC 4 cut(s) 1138, 1226, 1441, 1744
BstV1I GCAGC 6 cut(s) 110, 216, 376, 1348, 1624, 2396
BstX2I RGATCY 3 cut(s) 1474, 2019, 2056
BstXI CCANNNNNNTGG 1 cut(s) 1024
BstYI RGATCY 3 cut(s) 1474, 2019, 2056
BstZ17I GTATAC 1 cut(s) 1150
BsuI GTATCC 1 cut(s) 572
BsuRI GGCC 5 cut(s) 348, 707, 1312, 1574, 1968
BtgI CCRYGG 2 cut(s) 1084, 1326
BtsCI GGATG 6 cut(s) 18, 271, 933, 1263, 1296, 1605
BtsI GCAGTG 5 cut(s) 145, 480, 720, 1224, 2423
BtsIMutI CAGTG 8 cut(s) 145, 192, 430, 480, 720, 828, 1224, 2423
CaiI CAGNNNCTG 1 cut(s) 2129
Cfr10I RCCGGY 2 cut(s) 521, 1054
Cfr13I GGNCC 1 cut(s) 346
CseI GACGC 1 cut(s) 881
Csp6I GTAC 8 cut(s) 4, 412, 771, 879, 1109, 1200, 2165, 2341
CspCI CAANNNNNGTGG 4 cut(s) 421, 456, 587, 622
CviQI GTAC 8 cut(s) 4, 412, 771, 879, 1109, 1200, 2165, 2341
DdeI CTNAG 3 cut(s) 748, 1774, 2450
DpnI GATC 8 cut(s) 144, 1476, 1520, 1581, 1923, 2021, 2058, 2351
DpnII GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
DraI TTTAAA 2 cut(s) 297, 982
Eam1104I CTCTTC 2 cut(s) 1563, 1803
EarI CTCTTC 2 cut(s) 1563, 1803
Eco130I CCWWGG 1 cut(s) 1326
Eco32I GATATC 2 cut(s) 933, 993
Eco57I CTGAAG 2 cut(s) 1421, 2208
EcoRII CCWGG 4 cut(s) 311, 2122, 2214, 2335
EcoRV GATATC 2 cut(s) 933, 993
EcoT14I CCWWGG 1 cut(s) 1326
EcoT22I ATGCAT 1 cut(s) 1273
ErhI CCWWGG 1 cut(s) 1326
FaqI GGGAC 1 cut(s) 580
FauI CCCGC 1 cut(s) 2409
FbaI TGATCA 2 cut(s) 142, 1921
FblI GTMKAC 3 cut(s) 166, 846, 1149
Fnu4HI GCNGC 9 cut(s) 99, 222, 230, 349, 390, 577, 1362, 1638, 2385
FokI GGATG 6 cut(s) 25, 278, 940, 1270, 1303, 1612
Fsp4HI GCNGC 9 cut(s) 99, 222, 230, 349, 390, 577, 1362, 1638, 2385
FspBI CTAG 3 cut(s) 255, 1358, 2444
GluI GCNGC 9 cut(s) 99, 222, 230, 349, 390, 577, 1362, 1638, 2385
GsaI CCCAGC 1 cut(s) 2027
GsuI CTGGAG 2 cut(s) 414, 827
HaeIII GGCC 5 cut(s) 348, 707, 1312, 1574, 1968
HapII CCGG 2 cut(s) 522, 1055
HgaI GACGC 1 cut(s) 881
HincII GTYRAC 3 cut(s) 550, 1539, 2359
HindII GTYRAC 3 cut(s) 550, 1539, 2359
HindIII AAGCTT 1 cut(s) 1420
HinfI GANTC 7 cut(s) 482, 809, 1013, 1687, 1874, 1911, 2368
HpaI GTTAAC 1 cut(s) 1539
HpaII CCGG 2 cut(s) 522, 1055
HphI GGTGA 3 cut(s) 393, 1921, 2390
Hpy188I TCNGA 6 cut(s) 751, 871, 1507, 1723, 2035, 2328
Hpy188III TCNNGA 7 cut(s) 806, 1216, 1298, 1399, 1464, 2199, 2444
Hpy99I CGWCG 1 cut(s) 1045
HpyAV CCTTC 2 cut(s) 1461, 2492
HpyCH4III ACNGT 7 cut(s) 320, 1088, 1503, 1622, 1862, 2079, 2345
HpyCH4IV ACGT 2 cut(s) 276, 881
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 752, 1055, 1358, 1646, 1739, 2192
HpyF3I CTNAG 3 cut(s) 748, 1774, 2450
HpySE526I ACGT 2 cut(s) 276, 881
Ksp22I TGATCA 2 cut(s) 142, 1921
KspAI GTTAAC 1 cut(s) 1539
Kzo9I GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
LmnI GCTCC 1 cut(s) 2153
Lsp1109I GCAGC 6 cut(s) 110, 216, 376, 1348, 1624, 2396
LweI GCATC 8 cut(s) 256, 559, 885, 1258, 1281, 1504, 2204, 2257
MaeI CTAG 3 cut(s) 255, 1358, 2444
MaeII ACGT 2 cut(s) 276, 881
MaeIII GTNAC 6 cut(s) 715, 1088, 1927, 2079, 2244, 2396
MalI GATC 8 cut(s) 144, 1476, 1520, 1581, 1923, 2021, 2058, 2351
MboI GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
MboII GAAGA 7 cut(s) 1028, 1331, 1580, 1820, 2201, 2429, 2432
MfeI CAATTG 1 cut(s) 539
MflI RGATCY 3 cut(s) 1474, 2019, 2056
MhlI GDGCHC 4 cut(s) 1138, 1226, 1441, 1744
MlyI GAGTC 4 cut(s) 818, 1007, 1868, 2362
MmeI TCCRAC 2 cut(s) 1505, 2327
Mph1103I ATGCAT 1 cut(s) 1273
MroXI GAANNNNTTC 1 cut(s) 278
MseI TTAA 9 cut(s) 296, 378, 642, 656, 702, 981, 1251, 1538, 1802
MslI CAYNNNNRTG 5 cut(s) 180, 636, 683, 1229, 1751
MspA1I CMGCKG 1 cut(s) 1637
MspI CCGG 2 cut(s) 522, 1055
MspR9I CCNGG 4 cut(s) 313, 2124, 2216, 2337
MunI CAATTG 1 cut(s) 539
Mva1269I GAATGC 1 cut(s) 1989
MvaI CCWGG 4 cut(s) 313, 2124, 2216, 2337
MwoI GCNNNNNNNGC 7 cut(s) 104, 752, 1055, 1358, 1646, 1739, 2192
NcoI CCATGG 1 cut(s) 1326
NdeII GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
NlaIV GGNNCC 2 cut(s) 2021, 2220
NmeAIII GCCGAG 1 cut(s) 1759
NmuCI GTSAC 3 cut(s) 715, 1927, 2396
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 7 cut(s) 138, 185, 241, 1453, 1756, 2113, 2160
NspV TTCGAA 2 cut(s) 354, 2299
PaeI GCATGC 2 cut(s) 138, 2113
PciI ACATGT 1 cut(s) 1752
PctI GAATGC 1 cut(s) 1989
PdmI GAANNNNTTC 1 cut(s) 278
PfeI GAWTC 3 cut(s) 482, 1687, 1911
Pfl23II CGTACG 1 cut(s) 878
PflMI CCANNNNNTGG 1 cut(s) 2129
PkrI GCNGC 9 cut(s) 100, 223, 231, 350, 391, 578, 1363, 1639, 2386
PleI GAGTC 4 cut(s) 817, 1007, 1868, 2362
PpsI GAGTC 4 cut(s) 817, 1007, 1868, 2362
PscI ACATGT 1 cut(s) 1752
PshAI GACNNNNGTC 1 cut(s) 2394
PsiI TTATAA 1 cut(s) 2466
Psp6I CCWGG 4 cut(s) 311, 2122, 2214, 2335
PspFI CCCAGC 1 cut(s) 2023
PspGI CCWGG 4 cut(s) 311, 2122, 2214, 2335
PspLI CGTACG 1 cut(s) 878
PspN4I GGNNCC 2 cut(s) 2021, 2220
PspPI GGNCC 1 cut(s) 346
PstNI CAGNNNCTG 1 cut(s) 2129
PsuI RGATCY 3 cut(s) 1474, 2019, 2056
PvuII CAGCTG 1 cut(s) 1637
RsaI GTAC 8 cut(s) 5, 413, 772, 880, 1110, 1201, 2166, 2342
RsaNI GTAC 8 cut(s) 4, 412, 771, 879, 1109, 1200, 2165, 2341
RseI CAYNNNNRTG 5 cut(s) 180, 636, 683, 1229, 1751
SaqAI TTAA 9 cut(s) 296, 378, 642, 656, 702, 981, 1251, 1538, 1802
SatI GCNGC 9 cut(s) 99, 222, 230, 349, 390, 577, 1362, 1638, 2385
Sau3AI GATC 8 cut(s) 142, 1474, 1518, 1579, 1921, 2019, 2056, 2349
Sau96I GGNCC 1 cut(s) 346
SchI GAGTC 4 cut(s) 818, 1007, 1868, 2362
ScrFI CCNGG 4 cut(s) 313, 2124, 2216, 2337
SduI GDGCHC 4 cut(s) 1138, 1226, 1441, 1744
SfaNI GCATC 8 cut(s) 256, 559, 885, 1258, 1281, 1504, 2204, 2257
SfuI TTCGAA 2 cut(s) 354, 2299
SmiMI CAYNNNNRTG 5 cut(s) 180, 636, 683, 1229, 1751
SmlI CTYRAG 2 cut(s) 1064, 1868
SmoI CTYRAG 2 cut(s) 1064, 1868
SphI GCATGC 2 cut(s) 138, 2113
SsiI CCGC 5 cut(s) 222, 349, 577, 842, 2402
SspI AATATT 2 cut(s) 1186, 2176
SspMI CTAG 3 cut(s) 255, 1358, 2444
StyD4I CCNGG 4 cut(s) 311, 2122, 2214, 2335
StyI CCWWGG 1 cut(s) 1326
TaaI ACNGT 7 cut(s) 320, 1088, 1503, 1622, 1862, 2079, 2345
TaiI ACGT 2 cut(s) 279, 884
TaqI TCGA 6 cut(s) 204, 354, 1297, 1532, 2299, 2352
TaqII GACCGA 1 cut(s) 2021
TatI WGTACW 2 cut(s) 3, 411
TauI GCSGC 3 cut(s) 224, 351, 579
TfiI GAWTC 3 cut(s) 482, 1687, 1911
Tru1I TTAA 9 cut(s) 296, 378, 642, 656, 702, 981, 1251, 1538, 1802
Tru9I TTAA 9 cut(s) 296, 378, 642, 656, 702, 981, 1251, 1538, 1802
TscAI CASTG 8 cut(s) 145, 199, 430, 480, 720, 828, 1231, 2430
TseFI GTSAC 3 cut(s) 715, 1927, 2396
TseI GCWGC 6 cut(s) 98, 229, 389, 1361, 1637, 2384
Tsp45I GTSAC 3 cut(s) 715, 1927, 2396
TspGWI ACGGA 3 cut(s) 1029, 1880, 1985
TspRI CASTG 8 cut(s) 145, 199, 430, 480, 720, 828, 1231, 2430
Van91I CCANNNNNTGG 1 cut(s) 2129
VneI GTGCAC 3 cut(s) 1134, 1222, 1740
XapI RAATTY 5 cut(s) 356, 1278, 1712, 2302, 2331
XbaI TCTAGA 1 cut(s) 2443
XceI RCATGY 7 cut(s) 138, 185, 241, 1453, 1756, 2113, 2160
XcmI CCANNNNNNNNNTGG 1 cut(s) 1976
XmiI GTMKAC 3 cut(s) 166, 846, 1149
XmnI GAANNNNTTC 1 cut(s) 278
XspI CTAG 3 cut(s) 255, 1358, 2444
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.