Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006849

Physical Location & Seq

Genomic Coordinates Reverse (-)

25098115 .. 25103871

Gene Structure 5757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002074

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGTACAGGAGGATGTTATGTTCATTTTATAGACCCTTTACACCACAAAACTCCAAGTCCATACATACAAACGCCAACTACTTCCTCAACTTGGAAGCAGCTTTGGCAACTCAGTTTGATACTATGTTGCAAGCATGCAGTGACCATTCTCTTATTCAACAAGGTAGACAAGTTCATTCACATGCTATTTGCACTGGGCTCATCGAAAATAGTCTTGTTGCCGCAAAGCTGCTTGGCATGTATTTCCATTGTGCTAGTGTTGTGGATGCCAAGAACGTGTTTTATCAGCTTGATTTAAAGTATAGTTTTCCCTGGAACTGTATGATTAGAGGGTTTAGTATAATGGGCCGCTTCAATTTTGCCGTGCTATTTTACTTTAAGATGTTGGCTGCTGGAGTTTCACCTGACAAGTACACTTTTCCCAGTGTAATCAAGGCTTGTGGTGGTTTGAATAATGTGAGATTGGGTAAAGCAGTGCATGATTCAATGCAGTTCATGGGTTTTGAGGTGGATATATACGCCGGTAGTTCTTTACTTCAATTGTATGTCAACAATGGCTGTATCCTTGATGCACGCCGCTTGTTTGATAAAATGTCCCACAAAGATTGTGTTTCATGGAATGTCCTGCTTCATGGATATGTTAAAAAGGGGGAATTAAGTAATGCTGTTGGTATATTCATGGAAATGAGAAGTAGTGAAATTAAGGCCAATGCAGTGACATTTTCTTGCATTTTGTCTGTTTGTGCCTCAGAAGCAATGATTGGTTTTGGTACTCAACTTCATGGGTTAGTTGTTGCTTATGGTCTGGAGTCGCATTTTTCAGTGGTTAATACTTTGATAGCAGTCTACTCTAAATGTCATTGCTTGTCTGACGCTCGTACGTTGTTTGATATGATGCCACGAACTGATTTAGTGAGATGGAATGGGATGATATCTGGTTATATACAAAATGGGTTTATGAGTGAGGCTTCACATTTGTTTAAAGAGATGATATCTGCTGGTGTCAAACCTGACTCCATTACATTGGCAAGTTTTCTTCCATCGGTTGCTCAACCGGCTAACCTCAAGCAAGCTAAAGAAATCCACGGTTACATTATTAGACGTTGTGTACCTTTTGATGTGTATTTGAAAAGTGCACTTATCGATGTATACTCCAAGTGCAGAAGTGTGGAGATGGCACGCAATATTTTCAACCAAAGTACCAGAACTGATGTCGTGATGTGCACTGCTATGGTTTCAGGGCTTGTCCTTAATGGGATGAACACTGATGCATTGGAAATTTTTAGATGGATGCTTAGAGAGAAATTGAGGCCGAATACTCTCACCATGGCTAGTGTTCTTCCAGCTTGTGCTGGTCTAGCTGCTTTGAAATTGGGAAAGGAATTGCATGGCAATATCCTGAAGCACGGGCTTGATAAAAGCTTTCATGTGGGTAGTGCCCTTACTGGCATGTATGCAAAATCTGGAAGGCTGGATCTTGCTCATCAAGTTTTCCAAAGACTGTCAGAAAGAGATGCGATCTGTTGGAACTCGATGTTAACAAGCTATTCTCAAAATGGTAAACCAGAAGAGGCCATTGATCTATTTCGTCAAATGGGGATGGGAGGTGTAAAGTATGACTGTGTAAGCATTTCAGCTGCACTTTCTGCTTCTGCAAACTTACCAGCACTTCATTATGGGAAAGAGATTCATGGTTTCATTACTAAAAGTGAATTTAGCTCTGATATTTTTGCCGAGAGTGCACTCATAGACATGTATGCCAAATGTGGAAACTTAGTTCTTGCTCGCCGTGTATTTGACTTAATGGAAGAGAAAAATGAAGTTTCATGGAACAGCATTATTTCTGCTTATGGTTATCACGGTCGCCTTAAGGACTCTCTTGTTCTGTTCCGTGATATGCTTGATAATGGAATCCTACCTGATCATGTCACCTTTCTTGGTGTGTTATCTGCTTGTGTCCATGCAGGCCAAGTTGATGATGGAATTCTCTACTTCCGTTGCATGACCGAGGAATATGGGATCCCAGCTTGGTCAGAGCATTATGCTCTCATGGTAGATCTACTTGGGCGTGCTGGACGGTTACACGAAGCATTTGAAACAATAAAGAGCATGCCATTCTCCCCAGGTTCTGGTGTCTGGGGAACATTGCTTGGAGCATGTCGGGGTGAGGAAGCAGATCGTTCTCTTGGGATTCACTATGGGCATCTGCATCTTCAAAGTTTGGAGGGGAAAAAAAAACAGAGGAAGCATGTGGGGTTGGAAAAGAGAGATGGAGGTGCAGATGGGTCGAGCAGCAATTTTGGAGGAGGCTGCAATTACTTGCCGGAGTGGAACCTCATATTCCATGCAACAGCCCTAGTATATATCCCCATAATGAATCATAACAAAAGGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

799

Amino Acids

88.64

Weight (kDa)

8.39

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	105 - 147	1.4e-06	PPR repeat family
PPR_2	PF13041	202 - 249	3e-11	PPR repeat family
PPR_3	PF13812	202 - 249	3.7e-07	Pentatricopeptide repeat domain
PPR	PF01535	204 - 232	1.9e-06	PPR repeat
PPR_2	PF13041	303 - 342	2.7e-08	PPR repeat family
PPR	PF01535	307 - 335	4e-07	PPR repeat
PPR_3	PF13812	395 - 451	7.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	404 - 451	3e-06	PPR repeat family
PPR_2	PF13041	505 - 550	5.9e-08	PPR repeat family
PPR	PF01535	508 - 534	9.6e-08	PPR repeat
PPR_2	PF13041	606 - 653	3.6e-10	PPR repeat family
PPR	PF01535	608 - 638	2.6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21300
fragaria_vesca	FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440
malus_domestica	MD09G1249500.v1.1 MD17G1242300.v1.1
prunus_persica	Prupe.3G135500_v2.0.a1
pyrus_communis	pycom09g16630 pycom17g24490 pycom17g24500
rosa_chinensis	RchiOBHm_Chr7g0222301
rosa_laevigata	RLG00000002074
rosa_multiflora	Rmu_sc0007069.1_g000017
rosa_roxburghii	Rroxscaffold_3G00237140
rosa_rugosa	Rorug07G0207300 Rorug07G0207300 Rorug07G0207300 Rorug07G0207400 Rorug07G0207500
rosa_samantha	Rh7AG349000 Rh7BG339300 Rh7CG366400 Rh7DG345900
rosa_wichuraiana	Rw7G029520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2129
AccI	GTMKAC	3 cut(s)	166, 846, 1149
AciI	CCGC	3 cut(s)	222, 349, 577
AclWI	GGATC	3 cut(s)	1482, 2014, 2027
AcsI	RAATTY	3 cut(s)	1278, 1712, 1983
AcuI	CTGAAG	1 cut(s)	1421
AfaI	GTAC	6 cut(s)	5, 413, 772, 880, 1110, 1201
AfiI	CCNNNNNNNGG	2 cut(s)	91, 2129
AflII	CTTAAG	1 cut(s)	1868
AflIII	ACRYGT	2 cut(s)	276, 1752
AjnI	CCWGG	2 cut(s)	311, 2122
AjuI	GAANNNNNNNTTGG	2 cut(s)	744, 776
AloI	GAACNNNNNNTCC	3 cut(s)	36, 1761, 1793
Alw21I	GWGCWC	3 cut(s)	1138, 1226, 1744
Alw44I	GTGCAC	3 cut(s)	1134, 1222, 1740
AlwI	GGATC	3 cut(s)	1482, 2014, 2027
AlwNI	CAGNNNCTG	1 cut(s)	2129
AoxI	GGCC	5 cut(s)	346, 705, 1310, 1572, 1966
ApaLI	GTGCAC	3 cut(s)	1134, 1222, 1740
ApeKI	GCWGC	7 cut(s)	98, 229, 389, 1361, 1637, 2292, 2310
ApoI	RAATTY	3 cut(s)	1278, 1712, 1983
AspS9I	GGNCC	1 cut(s)	346
AsuHPI	GGTGA	4 cut(s)	393, 1315, 1921, 2177
BaeGI	GKGCMC	4 cut(s)	1138, 1226, 1441, 1744
BaeI	ACNNNNGTAYC	2 cut(s)	1183, 1216
BamHI	GGATCC	1 cut(s)	2019
BanII	GRGCYC	1 cut(s)	201
Bbv12I	GWGCWC	3 cut(s)	1138, 1226, 1744
BbvI	GCAGC	7 cut(s)	110, 216, 376, 1348, 1624, 2297, 2304
BccI	CCATC	8 cut(s)	912, 1048, 1168, 1281, 1594, 1973, 2264, 2276
BceAI	ACGGC	2 cut(s)	347, 1773
BcgI	CGANNNNNNTGC	2 cut(s)	2268, 2302
BciT130I	CCWGG	2 cut(s)	313, 2124
BciVI	GTATCC	1 cut(s)	572
BclI	TGATCA	1 cut(s)	1921
BfaI	CTAG	4 cut(s)	255, 1332, 1358, 2357
BfrI	CTTAAG	1 cut(s)	1868
BfuI	GTATCC	1 cut(s)	572
BglII	AGATCT	1 cut(s)	2056
Bme1390I	CCNGG	2 cut(s)	313, 2124
BmgT120I	GGNCC	1 cut(s)	346
BmiI	GGNNCC	2 cut(s)	2021, 2333
BmrFI	CCNGG	2 cut(s)	313, 2124
BmrI	ACTGGG	2 cut(s)	204, 417
BmsI	GCATC	8 cut(s)	256, 559, 885, 1258, 1281, 1504, 2212, 2218
BmuI	ACTGGG	2 cut(s)	204, 417
BpmI	CTGGAG	2 cut(s)	414, 827
BpuEI	CTTGAG	1 cut(s)	1049
Bsa29I	ATCGAT	1 cut(s)	1143
BsaJI	CCNNGG	5 cut(s)	311, 1084, 1326, 2007, 2122
Bsc4I	CCNNNNNNNGG	2 cut(s)	91, 2129
Bse118I	RCCGGY	2 cut(s)	521, 1054
Bse1I	ACTGG	3 cut(s)	199, 423, 1450
Bse3DI	GCAATG	3 cut(s)	762, 859, 2144
BseBI	CCWGG	2 cut(s)	313, 2124
BseCI	ATCGAT	1 cut(s)	1143
BseDI	CCNNGG	5 cut(s)	311, 1084, 1326, 2007, 2122
BseGI	GGATG	6 cut(s)	18, 271, 933, 1263, 1296, 1605
BseLI	CCNNNNNNNGG	2 cut(s)	91, 2129
BseMI	GCAATG	3 cut(s)	762, 859, 2144
BseMII	CTCAG	2 cut(s)	125, 762
BseNI	ACTGG	3 cut(s)	199, 423, 1450
BseRI	GAGGAG	1 cut(s)	2319
BseSI	GKGCMC	4 cut(s)	1138, 1226, 1441, 1744
BseXI	GCAGC	7 cut(s)	110, 216, 376, 1348, 1624, 2297, 2304
BseYI	CCCAGC	1 cut(s)	2023
BsgI	GTGCAG	3 cut(s)	1180, 1623, 2298
Bsh1285I	CGRYCG	1 cut(s)	1864
BshFI	GGCC	5 cut(s)	348, 707, 1312, 1574, 1968
BshVI	ATCGAT	1 cut(s)	1143
BsiEI	CGRYCG	1 cut(s)	1864
BsiHKAI	GWGCWC	3 cut(s)	1138, 1226, 1744
BsiSI	CCGG	3 cut(s)	522, 1055, 2324
BsiWI	CGTACG	1 cut(s)	878
BslFI	GGGAC	1 cut(s)	580
BslI	CCNNNNNNNGG	2 cut(s)	91, 2129
BsmFI	GGGAC	1 cut(s)	580
BsnI	GGCC	5 cut(s)	348, 707, 1312, 1574, 1968
Bsp1286I	GDGCHC	5 cut(s)	201, 1138, 1226, 1441, 1744
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
Bsp19I	CCATGG	1 cut(s)	1326
BspACI	CCGC	3 cut(s)	222, 349, 577
BspANI	GGCC	5 cut(s)	348, 707, 1312, 1574, 1968
BspCNI	CTCAG	2 cut(s)	124, 761
BspDI	ATCGAT	1 cut(s)	1143
BspLI	GGNNCC	2 cut(s)	2021, 2333
BspPI	GGATC	3 cut(s)	1482, 2014, 2027
BspTI	CTTAAG	1 cut(s)	1868
BsrDI	GCAATG	3 cut(s)	762, 859, 2144
BsrFI	RCCGGY	2 cut(s)	521, 1054
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	3 cut(s)	199, 423, 1450
BssAI	RCCGGY	2 cut(s)	521, 1054
BssECI	CCNNGG	5 cut(s)	311, 1084, 1326, 2007, 2122
BssMI	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
BssNAI	GTATAC	1 cut(s)	1150
BssT1I	CCWWGG	1 cut(s)	1326
Bst1107I	GTATAC	1 cut(s)	1150
Bst2UI	CCWGG	2 cut(s)	313, 2124
Bst4CI	ACNGT	6 cut(s)	320, 1088, 1503, 1622, 1862, 2079
Bst6I	CTCTTC	2 cut(s)	1563, 1803
BstAFI	CTTAAG	1 cut(s)	1868
BstAPI	GCANNNNNTGC	1 cut(s)	1646
BstAUI	TGTACA	1 cut(s)	3
BstC8I	GCNNGC	9 cut(s)	132, 136, 574, 1071, 1180, 1786, 1966, 2070, 2111
BstDEI	CTNAG	4 cut(s)	111, 748, 1295, 1774
BstDSI	CCRYGG	2 cut(s)	1084, 1326
BstF5I	GGATG	6 cut(s)	18, 271, 933, 1263, 1296, 1605
BstKTI	GATC	7 cut(s)	1477, 1521, 1582, 1924, 2022, 2059, 2179
BstMBI	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
BstMCI	CGRYCG	1 cut(s)	1864
BstMWI	GCNNNNNNNGC	6 cut(s)	104, 752, 1055, 1358, 1646, 1739
BstNI	CCWGG	2 cut(s)	313, 2124
BstNSI	RCATGY	8 cut(s)	138, 185, 241, 1453, 1756, 2113, 2160, 2252
BstSCI	CCNGG	2 cut(s)	311, 2122
BstSLI	GKGCMC	4 cut(s)	1138, 1226, 1441, 1744
BstV1I	GCAGC	7 cut(s)	110, 216, 376, 1348, 1624, 2297, 2304
BstX2I	RGATCY	3 cut(s)	1474, 2019, 2056
BstXI	CCANNNNNNTGG	1 cut(s)	1024
BstYI	RGATCY	3 cut(s)	1474, 2019, 2056
BstZ17I	GTATAC	1 cut(s)	1150
Bsu15I	ATCGAT	1 cut(s)	1143
BsuI	GTATCC	1 cut(s)	572
BsuRI	GGCC	5 cut(s)	348, 707, 1312, 1574, 1968
BsuTUI	ATCGAT	1 cut(s)	1143
BtgI	CCRYGG	2 cut(s)	1084, 1326
BtsCI	GGATG	6 cut(s)	18, 271, 933, 1263, 1296, 1605
BtsI	GCAGTG	4 cut(s)	145, 480, 720, 1224
BtsIMutI	CAGTG	8 cut(s)	145, 192, 430, 480, 720, 828, 1224, 1263
Cac8I	GCNNGC	9 cut(s)	132, 136, 574, 1071, 1180, 1786, 1966, 2070, 2111
CaiI	CAGNNNCTG	1 cut(s)	2129
Cfr10I	RCCGGY	2 cut(s)	521, 1054
Cfr13I	GGNCC	1 cut(s)	346
ClaI	ATCGAT	1 cut(s)	1143
CseI	GACGC	1 cut(s)	881
Csp6I	GTAC	6 cut(s)	4, 412, 771, 879, 1109, 1200
CspCI	CAANNNNNGTGG	4 cut(s)	421, 456, 587, 622
CviQI	GTAC	6 cut(s)	4, 412, 771, 879, 1109, 1200
DdeI	CTNAG	4 cut(s)	111, 748, 1295, 1774
DpnI	GATC	7 cut(s)	1476, 1520, 1581, 1923, 2021, 2058, 2178
DpnII	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
DraI	TTTAAA	2 cut(s)	297, 982
Eam1104I	CTCTTC	2 cut(s)	1563, 1803
EarI	CTCTTC	2 cut(s)	1563, 1803
Eco130I	CCWWGG	1 cut(s)	1326
Eco24I	GRGCYC	1 cut(s)	201
Eco32I	GATATC	2 cut(s)	933, 993
Eco57I	CTGAAG	1 cut(s)	1421
EcoRI	GAATTC	1 cut(s)	1983
EcoRII	CCWGG	2 cut(s)	311, 2122
EcoRV	GATATC	2 cut(s)	933, 993
EcoT14I	CCWWGG	1 cut(s)	1326
EcoT22I	ATGCAT	1 cut(s)	1273
EcoT38I	GRGCYC	1 cut(s)	201
ErhI	CCWWGG	1 cut(s)	1326
FaqI	GGGAC	1 cut(s)	580
FbaI	TGATCA	1 cut(s)	1921
FblI	GTMKAC	3 cut(s)	166, 846, 1149
FokI	GGATG	6 cut(s)	25, 278, 940, 1270, 1303, 1612
FriOI	GRGCYC	1 cut(s)	201
FspBI	CTAG	4 cut(s)	255, 1332, 1358, 2357
GsaI	CCCAGC	1 cut(s)	2027
GsuI	CTGGAG	2 cut(s)	414, 827
HaeIII	GGCC	5 cut(s)	348, 707, 1312, 1574, 1968
HapII	CCGG	3 cut(s)	522, 1055, 2324
HgaI	GACGC	1 cut(s)	881
HincII	GTYRAC	2 cut(s)	550, 1539
HindII	GTYRAC	2 cut(s)	550, 1539
HindIII	AAGCTT	1 cut(s)	1420
HinfI	GANTC	8 cut(s)	482, 809, 1013, 1687, 1874, 1911, 2191, 2377
HpaI	GTTAAC	1 cut(s)	1539
HpaII	CCGG	3 cut(s)	522, 1055, 2324
HphI	GGTGA	4 cut(s)	393, 1315, 1921, 2177
Hpy188I	TCNGA	5 cut(s)	751, 871, 1507, 1723, 2035
Hpy188III	TCNNGA	4 cut(s)	806, 1216, 1399, 1464
HpyAV	CCTTC	1 cut(s)	1461
HpyCH4III	ACNGT	6 cut(s)	320, 1088, 1503, 1622, 1862, 2079
HpyCH4IV	ACGT	3 cut(s)	276, 881, 1102
HpyF10VI	GCNNNNNNNGC	6 cut(s)	104, 752, 1055, 1358, 1646, 1739
HpyF3I	CTNAG	4 cut(s)	111, 748, 1295, 1774
HpySE526I	ACGT	3 cut(s)	276, 881, 1102
Ksp22I	TGATCA	1 cut(s)	1921
KspAI	GTTAAC	1 cut(s)	1539
Kzo9I	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
LmnI	GCTCC	1 cut(s)	2153
Lsp1109I	GCAGC	7 cut(s)	110, 216, 376, 1348, 1624, 2297, 2304
LweI	GCATC	8 cut(s)	256, 559, 885, 1258, 1281, 1504, 2212, 2218
MaeI	CTAG	4 cut(s)	255, 1332, 1358, 2357
MaeII	ACGT	3 cut(s)	276, 881, 1102
MaeIII	GTNAC	5 cut(s)	140, 715, 1088, 1927, 2079
MalI	GATC	7 cut(s)	1476, 1520, 1581, 1923, 2021, 2058, 2178
MboI	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
MboII	GAAGA	5 cut(s)	1028, 1331, 1580, 1820, 2204
MfeI	CAATTG	1 cut(s)	539
MflI	RGATCY	3 cut(s)	1474, 2019, 2056
MhlI	GDGCHC	5 cut(s)	201, 1138, 1226, 1441, 1744
MlyI	GAGTC	3 cut(s)	818, 1007, 1868
MmeI	TCCRAC	2 cut(s)	1505, 2238
Mph1103I	ATGCAT	1 cut(s)	1273
MslI	CAYNNNNRTG	5 cut(s)	180, 636, 683, 1229, 1751
MspA1I	CMGCKG	1 cut(s)	1637
MspCI	CTTAAG	1 cut(s)	1868
MspI	CCGG	3 cut(s)	522, 1055, 2324
MspR9I	CCNGG	2 cut(s)	313, 2124
MunI	CAATTG	1 cut(s)	539
MvaI	CCWGG	2 cut(s)	313, 2124
MwoI	GCNNNNNNNGC	6 cut(s)	104, 752, 1055, 1358, 1646, 1739
NcoI	CCATGG	1 cut(s)	1326
NdeII	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
NlaIV	GGNNCC	2 cut(s)	2021, 2333
NmeAIII	GCCGAG	1 cut(s)	1759
NmuCI	GTSAC	3 cut(s)	140, 715, 1927
NsiI	ATGCAT	1 cut(s)	1273
NspI	RCATGY	8 cut(s)	138, 185, 241, 1453, 1756, 2113, 2160, 2252
PaeI	GCATGC	2 cut(s)	138, 2113
PciI	ACATGT	1 cut(s)	1752
PfeI	GAWTC	5 cut(s)	482, 1687, 1911, 2191, 2377
Pfl23II	CGTACG	1 cut(s)	878
PflMI	CCANNNNNTGG	1 cut(s)	2129
PleI	GAGTC	3 cut(s)	817, 1007, 1868
PpsI	GAGTC	3 cut(s)	817, 1007, 1868
PscI	ACATGT	1 cut(s)	1752
Psp6I	CCWGG	2 cut(s)	311, 2122
PspFI	CCCAGC	1 cut(s)	2023
PspGI	CCWGG	2 cut(s)	311, 2122
PspLI	CGTACG	1 cut(s)	878
PspN4I	GGNNCC	2 cut(s)	2021, 2333
PspPI	GGNCC	1 cut(s)	346
PstNI	CAGNNNCTG	1 cut(s)	2129
PsuI	RGATCY	3 cut(s)	1474, 2019, 2056
PvuII	CAGCTG	1 cut(s)	1637
RsaI	GTAC	6 cut(s)	5, 413, 772, 880, 1110, 1201
RsaNI	GTAC	6 cut(s)	4, 412, 771, 879, 1109, 1200
RseI	CAYNNNNRTG	5 cut(s)	180, 636, 683, 1229, 1751
Sau3AI	GATC	7 cut(s)	1474, 1518, 1579, 1921, 2019, 2056, 2176
Sau96I	GGNCC	1 cut(s)	346
SchI	GAGTC	3 cut(s)	818, 1007, 1868
ScrFI	CCNGG	2 cut(s)	313, 2124
SduI	GDGCHC	5 cut(s)	201, 1138, 1226, 1441, 1744
SfaNI	GCATC	8 cut(s)	256, 559, 885, 1258, 1281, 1504, 2212, 2218
SmiMI	CAYNNNNRTG	5 cut(s)	180, 636, 683, 1229, 1751
SmlI	CTYRAG	2 cut(s)	1064, 1868
SmoI	CTYRAG	2 cut(s)	1064, 1868
SphI	GCATGC	2 cut(s)	138, 2113
SsiI	CCGC	3 cut(s)	222, 349, 577
SspI	AATATT	1 cut(s)	1186
SspMI	CTAG	4 cut(s)	255, 1332, 1358, 2357
StyD4I	CCNGG	2 cut(s)	311, 2122
StyI	CCWWGG	1 cut(s)	1326
TaaI	ACNGT	6 cut(s)	320, 1088, 1503, 1622, 1862, 2079
TaiI	ACGT	3 cut(s)	279, 884, 1105
TaqI	TCGA	4 cut(s)	204, 1143, 1532, 2288
TaqII	GACCGA	1 cut(s)	2021
TatI	WGTACW	2 cut(s)	3, 411
TauI	GCSGC	3 cut(s)	224, 351, 579
TfiI	GAWTC	5 cut(s)	482, 1687, 1911, 2191, 2377
TscAI	CASTG	8 cut(s)	145, 199, 430, 480, 720, 828, 1231, 1270
TseFI	GTSAC	3 cut(s)	140, 715, 1927
TseI	GCWGC	7 cut(s)	98, 229, 389, 1361, 1637, 2292, 2310
Tsp45I	GTSAC	3 cut(s)	140, 715, 1927
TspGWI	ACGGA	2 cut(s)	1880, 1985
TspRI	CASTG	8 cut(s)	145, 199, 430, 480, 720, 828, 1231, 1270
Van91I	CCANNNNNTGG	1 cut(s)	2129
Vha464I	CTTAAG	1 cut(s)	1868
VneI	GTGCAC	3 cut(s)	1134, 1222, 1740
XapI	RAATTY	3 cut(s)	1278, 1712, 1983
XceI	RCATGY	8 cut(s)	138, 185, 241, 1453, 1756, 2113, 2160, 2252
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1976
XmiI	GTMKAC	3 cut(s)	166, 846, 1149
XspI	CTAG	4 cut(s)	255, 1332, 1358, 2357
Zsp2I	ATGCAT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.