Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006849

Physical Location & Seq

Genomic Coordinates Reverse (-)

24724440 .. 24729752

Gene Structure 5313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00237140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGAAATGAGAAGTAGTGAAATTAAGGCCAATGCAGTGACATTTTCTTGCATTTTGTCTGTTTGTGCCTCAGAAGCAATGATTGGTTTTGGTACTCAACTTCATGGGTTAGTTGTTGCGTATGGTCTGGAGTCGCATTTTTCAGTGGCTAATACTTTGATAGCAGTCTACTCTAAATGTCATTGCTTGTCTGACGTTCGTACTTTGTTTGATATGATGCCACGAACTGATTTAGTGAGATGGAATGGGATGATATCTGGTTATATACAAAATGGGTTTATGAGTGAGGCTTCACATTTGTTTAAAGAGATGATATCTGCTGGTGTCAAACCTGACTCCATCACATTGGCAAGTTTTCTTCCGTCGGTTGCTCAACCGGGTAACCTCAAGCAAGCTAAAGAAATCCACGGTTACATTATTAGACATTGTGTACCTTTTGATGTGTATTTGAAAAGTGCACTTATCGATGTATACTCCAAGTGCAGAAGTATGGAGATGGCACGCAATATTTTCAACCAAAGTACCAGAACTGATGTCGTGATGTGCACTGCTATGGTTTCAGGGCTTGTCCTTAATGGGATGAACACTGATGCATTGGAAATTTTTAGATGGATGCTTGGAGAGAAATTGAGGCCGAATACTCTCACCATGGCAAGTGTTCTTCCAGCTTGTGCTGGTCTAGCTGCTTTGAAATTGGGAAAGGAATTGCATGGCAATATCCTGAAGCATGGGCTTGATAAAAGCTTTCATGTGGGTAGTGCCCTTACTGGCATGTATGCAAAATCTGGAAGGCTGGATCTTGCTCATCAAGTTTTCCAAAGACTGTCAGAAAGAGATGCGATCTGTTGGAACTCGATGTTAACAAGCTATTCTCAAAATGGTAAACCAGAAGAGGCCATTGATCTATTTCGTCAAATGGGGATGGGAGGTGTAAAGTATGACTGTGTAAGCATTTCAGCTGCACTTTCTGCTTCTGCAAACTTACCAGCACTTCATTATGGGAAAGAGATTCATGGTTTCATTACTAAAAGTGAATTTAGCTCTGATATTTTTGCCGAGAGTGCACTCATAGACATGTATGCCAAATGTGGAAACTTAGTTCTTGCTCGCCGTGTATTTGACTTAATGGAAGAGAAAAATGAAGTTTCATGGAACAGCATTATTTCTGCTTATGGTTATCACGGTCACCTTAAGGACTCTCTTGTTCTGTTCCGTGATATGCTTGATAATGGAATCCTACCTGATCATGTCACCTTTCTTGGTGTGTTATCTGCTTGTGTCCATGCAGGCCAAGTTGATGATGGAATTCTCTACTTCCACTGCATGACCGAGGAATATGGGATCCCAGCTTGGTCAGAGCATTATGCCCTCATGGTAGATCTACTTGGGCGTGCTGGACGGTTACACGAAGCATTTGAAACAATAAAGAGCATGCCATTCTCTCCAGGTTCTGGTGTCTGGGGAACATTGCTTGGAGCATGTCGGGTACATGGCAATATTGAGCTTGCTGAAGAAGCATCAAGACATCTTTTTGACCTGGAACCACACAATTCTGGCTATTATATGTTACTCGCAAATATATATGCTGATGCTGGACAATGGGAGAATGTGCGTAAGGTTCGAAATTTGATGAACGAAAGAGGAGTTCAGAAAATTCCTGGGTACAGTTGGATCGAGGTCAACAACAAGACTCATGTATTTGTTGCAGCAGACAGAAGTCACCCGCAATCTGCTAAATTACATTCACTGCTCAACATTCTTCTTCTAGAGCTGAGAAAAGAGGGTTATAATCCTCAACCTTATCTTCCAATGCACCCACAGACAAAGGGTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

611

Amino Acids

67.77

Weight (kDa)

6.51

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	77 - 116	2e-08	PPR repeat family
PPR	PF01535	81 - 109	2.9e-07	PPR repeat
PPR_2	PF13041	279 - 324	4.2e-08	PPR repeat family
PPR	PF01535	282 - 308	7e-08	PPR repeat
PPR_2	PF13041	380 - 427	2.7e-10	PPR repeat family
PPR	PF01535	382 - 412	4.8e-06	PPR repeat
E_motif	PF20431	497 - 559	1.6e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21300
fragaria_vesca	FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440
malus_domestica	MD09G1249500.v1.1 MD17G1242300.v1.1
prunus_persica	Prupe.3G135500_v2.0.a1
pyrus_communis	pycom09g16630 pycom17g24490 pycom17g24500
rosa_chinensis	RchiOBHm_Chr7g0222301
rosa_laevigata	RLG00000002074
rosa_multiflora	Rmu_sc0007069.1_g000017
rosa_roxburghii	Rroxscaffold_3G00237140
rosa_rugosa	Rorug07G0207300 Rorug07G0207300 Rorug07G0207300 Rorug07G0207400 Rorug07G0207500
rosa_samantha	Rh7AG349000 Rh7BG339300 Rh7CG366400 Rh7DG345900
rosa_wichuraiana	Rw7G029520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1788
AccB7I	CCANNNNNTGG	1 cut(s)	1451
AccI	GTMKAC	2 cut(s)	168, 471
AciI	CCGC	1 cut(s)	1724
AclWI	GGATC	4 cut(s)	804, 1336, 1349, 1679
AcsI	RAATTY	5 cut(s)	600, 1034, 1305, 1624, 1653
AcuI	CTGAAG	2 cut(s)	743, 1530
AfaI	GTAC	6 cut(s)	94, 202, 432, 523, 1488, 1664
AfiI	CCNNNNNNNGG	1 cut(s)	1451
AflII	CTTAAG	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	1074
AgsI	TTSAA	4 cut(s)	451, 514, 691, 1418
AjnI	CCWGG	3 cut(s)	1444, 1536, 1657
AjuI	GAANNNNNNNTTGG	2 cut(s)	66, 98
AloI	GAACNNNNNNTCC	2 cut(s)	1083, 1115
Alw21I	GWGCWC	3 cut(s)	460, 548, 1066
Alw44I	GTGCAC	3 cut(s)	456, 544, 1062
AlwI	GGATC	4 cut(s)	804, 1336, 1349, 1679
AlwNI	CAGNNNCTG	1 cut(s)	1451
AoxI	GGCC	4 cut(s)	27, 632, 894, 1288
ApaLI	GTGCAC	3 cut(s)	456, 544, 1062
ApeKI	GCWGC	3 cut(s)	683, 959, 1706
ApoI	RAATTY	5 cut(s)	600, 1034, 1305, 1624, 1653
AsuC2I	CCSGG	1 cut(s)	378
AsuHPI	GGTGA	4 cut(s)	637, 1178, 1243, 1712
AsuII	TTCGAA	1 cut(s)	1621
BaeGI	GKGCMC	4 cut(s)	460, 548, 763, 1066
BaeI	ACNNNNGTAYC	2 cut(s)	505, 538
BamHI	GGATCC	1 cut(s)	1341
Bbv12I	GWGCWC	3 cut(s)	460, 548, 1066
BbvI	GCAGC	3 cut(s)	670, 946, 1718
BccI	CCATC	6 cut(s)	234, 347, 490, 603, 916, 1295
BceAI	ACGGC	1 cut(s)	1095
BciT130I	CCWGG	3 cut(s)	1446, 1538, 1659
BclI	TGATCA	1 cut(s)	1243
BcnI	CCSGG	1 cut(s)	378
BfaI	CTAG	2 cut(s)	680, 1766
BfrI	CTTAAG	1 cut(s)	1190
BglII	AGATCT	1 cut(s)	1378
BisI	GCNGC	3 cut(s)	684, 960, 1707
BlsI	GCNGC	3 cut(s)	685, 961, 1708
Bme1390I	CCNGG	4 cut(s)	378, 1446, 1538, 1659
BmiI	GGNNCC	2 cut(s)	1343, 1542
BmrFI	CCNGG	4 cut(s)	378, 1446, 1538, 1659
BmsI	GCATC	6 cut(s)	207, 580, 603, 826, 1526, 1579
BoxI	GACNNNNGTC	1 cut(s)	1716
BpmI	CTGGAG	2 cut(s)	149, 1428
Bpu14I	TTCGAA	1 cut(s)	1621
BpuEI	CTTGAG	1 cut(s)	371
BpuMI	CCSGG	1 cut(s)	378
Bsa29I	ATCGAT	1 cut(s)	465
BsaJI	CCNNGG	4 cut(s)	406, 648, 1329, 1658
Bsc4I	CCNNNNNNNGG	1 cut(s)	1451
Bse1I	ACTGG	1 cut(s)	772
Bse3DI	GCAATG	3 cut(s)	84, 181, 1466
BseBI	CCWGG	3 cut(s)	1446, 1538, 1659
BseCI	ATCGAT	1 cut(s)	465
BseDI	CCNNGG	4 cut(s)	406, 648, 1329, 1658
BseGI	GGATG	4 cut(s)	255, 585, 618, 927
BseLI	CCNNNNNNNGG	1 cut(s)	1451
BseMI	GCAATG	3 cut(s)	84, 181, 1466
BseMII	CTCAG	2 cut(s)	84, 1763
BseNI	ACTGG	1 cut(s)	772
BseRI	GAGGAG	1 cut(s)	1656
BseSI	GKGCMC	4 cut(s)	460, 548, 763, 1066
BseXI	GCAGC	3 cut(s)	670, 946, 1718
BseYI	CCCAGC	1 cut(s)	1345
BsgI	GTGCAG	2 cut(s)	502, 945
BshFI	GGCC	4 cut(s)	29, 634, 896, 1290
BshVI	ATCGAT	1 cut(s)	465
BsiHKAI	GWGCWC	3 cut(s)	460, 548, 1066
BsiSI	CCGG	1 cut(s)	377
BslI	CCNNNNNNNGG	1 cut(s)	1451
BsnI	GGCC	4 cut(s)	29, 634, 896, 1290
Bsp119I	TTCGAA	1 cut(s)	1621
Bsp1286I	GDGCHC	4 cut(s)	460, 548, 763, 1066
Bsp143I	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
Bsp19I	CCATGG	1 cut(s)	648
BspACI	CCGC	1 cut(s)	1724
BspANI	GGCC	4 cut(s)	29, 634, 896, 1290
BspCNI	CTCAG	2 cut(s)	83, 1764
BspDI	ATCGAT	1 cut(s)	465
BspLI	GGNNCC	2 cut(s)	1343, 1542
BspPI	GGATC	4 cut(s)	804, 1336, 1349, 1679
BspT104I	TTCGAA	1 cut(s)	1621
BspTI	CTTAAG	1 cut(s)	1190
BsrDI	GCAATG	3 cut(s)	84, 181, 1466
BsrI	ACTGG	1 cut(s)	772
BssECI	CCNNGG	4 cut(s)	406, 648, 1329, 1658
BssMI	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
BssNAI	GTATAC	1 cut(s)	472
BssT1I	CCWWGG	1 cut(s)	648
Bst1107I	GTATAC	1 cut(s)	472
Bst2UI	CCWGG	3 cut(s)	1446, 1538, 1659
Bst4CI	ACNGT	6 cut(s)	410, 825, 944, 1184, 1401, 1667
Bst6I	CTCTTC	2 cut(s)	885, 1125
BstAFI	CTTAAG	1 cut(s)	1190
BstAPI	GCANNNNNTGC	1 cut(s)	968
BstBI	TTCGAA	1 cut(s)	1621
BstC8I	GCNNGC	7 cut(s)	393, 502, 1108, 1288, 1392, 1433, 1506
BstDEI	CTNAG	3 cut(s)	70, 1096, 1772
BstDSI	CCRYGG	2 cut(s)	406, 648
BstEII	GGTNACC	2 cut(s)	380, 1184
BstF5I	GGATG	4 cut(s)	255, 585, 618, 927
BstKTI	GATC	7 cut(s)	799, 843, 904, 1246, 1344, 1381, 1674
BstMBI	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
BstMWI	GCNNNNNNNGC	5 cut(s)	74, 680, 968, 1061, 1514
BstNI	CCWGG	3 cut(s)	1446, 1538, 1659
BstNSI	RCATGY	4 cut(s)	775, 1078, 1435, 1482
BstPAI	GACNNNNGTC	1 cut(s)	1716
BstPI	GGTNACC	2 cut(s)	380, 1184
BstSCI	CCNGG	4 cut(s)	376, 1444, 1536, 1657
BstSLI	GKGCMC	4 cut(s)	460, 548, 763, 1066
BstV1I	GCAGC	3 cut(s)	670, 946, 1718
BstX2I	RGATCY	3 cut(s)	796, 1341, 1378
BstXI	CCANNNNNNTGG	1 cut(s)	346
BstYI	RGATCY	3 cut(s)	796, 1341, 1378
BstZ17I	GTATAC	1 cut(s)	472
Bsu15I	ATCGAT	1 cut(s)	465
BsuRI	GGCC	4 cut(s)	29, 634, 896, 1290
BsuTUI	ATCGAT	1 cut(s)	465
BtgI	CCRYGG	2 cut(s)	406, 648
BtsCI	GGATG	4 cut(s)	255, 585, 618, 927
BtsI	GCAGTG	4 cut(s)	42, 546, 1318, 1745
BtsIMutI	CAGTG	6 cut(s)	42, 150, 546, 585, 1318, 1745
Cac8I	GCNNGC	7 cut(s)	393, 502, 1108, 1288, 1392, 1433, 1506
CaiI	CAGNNNCTG	1 cut(s)	1451
ClaI	ATCGAT	1 cut(s)	465
Csp6I	GTAC	6 cut(s)	93, 201, 431, 522, 1487, 1663
CviQI	GTAC	6 cut(s)	93, 201, 431, 522, 1487, 1663
DdeI	CTNAG	3 cut(s)	70, 1096, 1772
DpnI	GATC	7 cut(s)	798, 842, 903, 1245, 1343, 1380, 1673
DpnII	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
DraI	TTTAAA	1 cut(s)	304
Eam1104I	CTCTTC	2 cut(s)	885, 1125
EarI	CTCTTC	2 cut(s)	885, 1125
Eco130I	CCWWGG	1 cut(s)	648
Eco32I	GATATC	2 cut(s)	255, 315
Eco57I	CTGAAG	2 cut(s)	743, 1530
Eco91I	GGTNACC	2 cut(s)	380, 1184
EcoO65I	GGTNACC	2 cut(s)	380, 1184
EcoRI	GAATTC	1 cut(s)	1305
EcoRII	CCWGG	3 cut(s)	1444, 1536, 1657
EcoRV	GATATC	2 cut(s)	255, 315
EcoT14I	CCWWGG	1 cut(s)	648
EcoT22I	ATGCAT	1 cut(s)	595
ErhI	CCWWGG	1 cut(s)	648
FauI	CCCGC	1 cut(s)	1731
FbaI	TGATCA	1 cut(s)	1243
FblI	GTMKAC	2 cut(s)	168, 471
Fnu4HI	GCNGC	3 cut(s)	684, 960, 1707
FokI	GGATG	4 cut(s)	262, 592, 625, 934
Fsp4HI	GCNGC	3 cut(s)	684, 960, 1707
FspBI	CTAG	2 cut(s)	680, 1766
GluI	GCNGC	3 cut(s)	684, 960, 1707
GsaI	CCCAGC	1 cut(s)	1349
GsuI	CTGGAG	2 cut(s)	149, 1428
HaeIII	GGCC	4 cut(s)	29, 634, 896, 1290
HapII	CCGG	1 cut(s)	377
HincII	GTYRAC	2 cut(s)	861, 1681
HindII	GTYRAC	2 cut(s)	861, 1681
HindIII	AAGCTT	1 cut(s)	742
HinfI	GANTC	6 cut(s)	131, 335, 1009, 1196, 1233, 1690
HpaI	GTTAAC	1 cut(s)	861
HpaII	CCGG	1 cut(s)	377
HphI	GGTGA	4 cut(s)	637, 1178, 1243, 1712
Hpy166II	GTNNAC	9 cut(s)	169, 431, 458, 472, 546, 861, 884, 1064, 1681
Hpy188I	TCNGA	6 cut(s)	73, 193, 829, 1045, 1357, 1650
Hpy188III	TCNNGA	6 cut(s)	128, 538, 721, 786, 1521, 1766
Hpy8I	GTNNAC	9 cut(s)	169, 431, 458, 472, 546, 861, 884, 1064, 1681
Hpy99I	CGWCG	1 cut(s)	367
HpyAV	CCTTC	1 cut(s)	783
HpyCH4III	ACNGT	6 cut(s)	410, 825, 944, 1184, 1401, 1667
HpyCH4IV	ACGT	1 cut(s)	195
HpyF10VI	GCNNNNNNNGC	5 cut(s)	74, 680, 968, 1061, 1514
HpyF3I	CTNAG	3 cut(s)	70, 1096, 1772
HpySE526I	ACGT	1 cut(s)	195
Ksp22I	TGATCA	1 cut(s)	1243
KspAI	GTTAAC	1 cut(s)	861
Kzo9I	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
LmnI	GCTCC	1 cut(s)	1475
Lsp1109I	GCAGC	3 cut(s)	670, 946, 1718
LweI	GCATC	6 cut(s)	207, 580, 603, 826, 1526, 1579
MaeI	CTAG	2 cut(s)	680, 1766
MaeII	ACGT	1 cut(s)	195
MaeIII	GTNAC	8 cut(s)	37, 380, 410, 1184, 1249, 1401, 1566, 1718
MalI	GATC	7 cut(s)	798, 842, 903, 1245, 1343, 1380, 1673
MboI	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
MboII	GAAGA	8 cut(s)	350, 653, 902, 1142, 1523, 1751, 1754, 1796
MflI	RGATCY	3 cut(s)	796, 1341, 1378
MhlI	GDGCHC	4 cut(s)	460, 548, 763, 1066
MlyI	GAGTC	4 cut(s)	140, 329, 1190, 1684
MmeI	TCCRAC	2 cut(s)	827, 1649
Mph1103I	ATGCAT	1 cut(s)	595
MseI	TTAA	6 cut(s)	24, 303, 573, 860, 1124, 1191
MslI	CAYNNNNRTG	2 cut(s)	551, 1073
MspA1I	CMGCKG	1 cut(s)	959
MspCI	CTTAAG	1 cut(s)	1190
MspI	CCGG	1 cut(s)	377
MspR9I	CCNGG	4 cut(s)	378, 1446, 1538, 1659
MvaI	CCWGG	3 cut(s)	1446, 1538, 1659
MwoI	GCNNNNNNNGC	5 cut(s)	74, 680, 968, 1061, 1514
NciI	CCSGG	1 cut(s)	378
NcoI	CCATGG	1 cut(s)	648
NdeII	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
NlaIV	GGNNCC	2 cut(s)	1343, 1542
NmeAIII	GCCGAG	1 cut(s)	1081
NmuCI	GTSAC	4 cut(s)	37, 1184, 1249, 1718
NsiI	ATGCAT	1 cut(s)	595
NspI	RCATGY	4 cut(s)	775, 1078, 1435, 1482
NspV	TTCGAA	1 cut(s)	1621
PaeI	GCATGC	1 cut(s)	1435
PciI	ACATGT	1 cut(s)	1074
PfeI	GAWTC	2 cut(s)	1009, 1233
PflMI	CCANNNNNTGG	1 cut(s)	1451
PkrI	GCNGC	3 cut(s)	685, 961, 1708
PleI	GAGTC	4 cut(s)	139, 329, 1190, 1684
PpsI	GAGTC	4 cut(s)	139, 329, 1190, 1684
PscI	ACATGT	1 cut(s)	1074
PshAI	GACNNNNGTC	1 cut(s)	1716
PsiI	TTATAA	1 cut(s)	1788
Psp6I	CCWGG	3 cut(s)	1444, 1536, 1657
PspEI	GGTNACC	2 cut(s)	380, 1184
PspFI	CCCAGC	1 cut(s)	1345
PspGI	CCWGG	3 cut(s)	1444, 1536, 1657
PspN4I	GGNNCC	2 cut(s)	1343, 1542
PstNI	CAGNNNCTG	1 cut(s)	1451
PsuI	RGATCY	3 cut(s)	796, 1341, 1378
PvuII	CAGCTG	1 cut(s)	959
RsaI	GTAC	6 cut(s)	94, 202, 432, 523, 1488, 1664
RsaNI	GTAC	6 cut(s)	93, 201, 431, 522, 1487, 1663
RseI	CAYNNNNRTG	2 cut(s)	551, 1073
SaqAI	TTAA	6 cut(s)	24, 303, 573, 860, 1124, 1191
SatI	GCNGC	3 cut(s)	684, 960, 1707
Sau3AI	GATC	7 cut(s)	796, 840, 901, 1243, 1341, 1378, 1671
SchI	GAGTC	4 cut(s)	140, 329, 1190, 1684
ScrFI	CCNGG	4 cut(s)	378, 1446, 1538, 1659
SduI	GDGCHC	4 cut(s)	460, 548, 763, 1066
SfaNI	GCATC	6 cut(s)	207, 580, 603, 826, 1526, 1579
SfuI	TTCGAA	1 cut(s)	1621
SmiMI	CAYNNNNRTG	2 cut(s)	551, 1073
SmlI	CTYRAG	2 cut(s)	386, 1190
SmoI	CTYRAG	2 cut(s)	386, 1190
SphI	GCATGC	1 cut(s)	1435
SsiI	CCGC	1 cut(s)	1724
SspI	AATATT	2 cut(s)	508, 1498
SspMI	CTAG	2 cut(s)	680, 1766
StyD4I	CCNGG	4 cut(s)	376, 1444, 1536, 1657
StyI	CCWWGG	1 cut(s)	648
TaaI	ACNGT	6 cut(s)	410, 825, 944, 1184, 1401, 1667
TaiI	ACGT	1 cut(s)	198
TaqI	TCGA	4 cut(s)	465, 854, 1621, 1674
TaqII	GACCGA	1 cut(s)	1343
TfiI	GAWTC	2 cut(s)	1009, 1233
Tru1I	TTAA	6 cut(s)	24, 303, 573, 860, 1124, 1191
Tru9I	TTAA	6 cut(s)	24, 303, 573, 860, 1124, 1191
TscAI	CASTG	6 cut(s)	42, 150, 553, 592, 1325, 1752
TseFI	GTSAC	4 cut(s)	37, 1184, 1249, 1718
TseI	GCWGC	3 cut(s)	683, 959, 1706
Tsp45I	GTSAC	4 cut(s)	37, 1184, 1249, 1718
TspDTI	ATGAA	9 cut(s)	92, 596, 737, 983, 1001, 1009, 1137, 1155, 1646
TspGWI	ACGGA	2 cut(s)	351, 1202
TspRI	CASTG	6 cut(s)	42, 150, 553, 592, 1325, 1752
Van91I	CCANNNNNTGG	1 cut(s)	1451
Vha464I	CTTAAG	1 cut(s)	1190
VneI	GTGCAC	3 cut(s)	456, 544, 1062
XapI	RAATTY	5 cut(s)	600, 1034, 1305, 1624, 1653
XbaI	TCTAGA	1 cut(s)	1765
XceI	RCATGY	4 cut(s)	775, 1078, 1435, 1482
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1298
XmiI	GTMKAC	2 cut(s)	168, 471
XspI	CTAG	2 cut(s)	680, 1766
Zsp2I	ATGCAT	1 cut(s)	595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.