Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006849

Physical Location & Seq

Genomic Coordinates Reverse (-)

14279170 .. 14284960

Gene Structure 5791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G135500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGTTCAAGAAAGTTATATGTCCAATCTATAAACATTTCATACCCATTACATCACAAAGATCCAAGTCTGTACATACAGACTGCAAATACTTCCTTAATCTGGAAGGGGCAGTGGCAAGCCAAATTGCTTCAATCTTGCAAGCTTGTAGTGATCATTCTCTTATCCAACAAGGTAGACAAGTTCATGCACATGCTATTTGCAGTGGACTTGTGAAAAACAGCCTTGTCGGTACAAAGATTTTGGGTATGTATTTTCTCTGTGGGAGCATTGTGGATGCTAAGAACATCTTTTATAAGCTTGATTTGCAATATACTTTGCCTTGGAACTGGATGATTAGAGGGTTTACTATGATGGGTTACTTTGAGTTTGCCTTGCTGTTTTACTTTAAGATGTTGGGTTCTGGAATTTCACCTGACAAGTACACTTTTCCAAGTGTAATTAAAGCTTGCGGTGGTGTGAATAATGTAAGATTGGGTAAAGCAATCTATGATACCATCCAGTTTATGGGTTTTGGAGTGGATATATTTGTGGGTAGTTCTTTGATTCAATTGTATGTGGACAATGGTTGTATCCATGATGCATGGTGCTTGTTTGTTGAAATGCCTCACAAAGATTGTGTTTTATGGAATGTCATGCTTCATGGTTATGTTAAAAACGGAGAATCGAAGAATGCTGTTGGAATGTTCTTGGAAATGAGAAATAGTGAAATTAAGCCCAATGCAGTGACGTTCGCTTGCATTTTGTCTGTTTGTGCCTCAGAAGCTATGATTGGTTTTGGTACTCAGCTTCATGGGCTAATTGTTGCTTGTGGGTTGGAGTTGGATTCTCCAGTGGCTAATACATTGTTAGCAATGTATTCAAAATGCCAGTGCTTGTCTGAGGCCCGCAAATTGTTTGATATGATGCCACGTACTGATTTAGTGACATGGAACGGAATGATATCTGGGTATATACAAAATGGGTTTATGGTTGAGGCTTCACGCTTGTTTCAAGCGATGATTTCTTCTAGTGTCAAACCGGACTCAATCACATTTGCAAGTTTTCTACCATCGGTTGCTGAACTGGCTAACCTCAAGCAAGGGCTCGTTCTCAATGGGATGAATCATGATGCATTGGAAATTTTTAGATGGTTACTTAAAGAGAAAATGCGACCGAATTCTCTAACCTTGGCAAGTGTTTTACCAGCTTGTGCTGGTTTGGTTGCCCTGAAATTGGGAAAGGAATTGCATGGAAACATCCTCAAGCATGGGCTTGACGGAAGGCTCCATCTGGGAAGTGCGCTTACAGACATGTATGCAAAATCTGGAAGATTGGATCTTGCTCATCAAGTTTTTGAAAGAATGTTTGAAAGGGACACCATATGTTGGAACTCAATGATAACAAGCTATTCCCAGAATGGCAAGCCAGAAGAGGCCATTGATATATTTCGTCAAATGGGGATGGCAGGTGCCAAGTATGACTGTGTAAGCATTTCAGCTGCTCTTTCTGCTTGTGCAAACTTACCGGCACTTCATTATGGGAAAGAGATTCATGGTTTCATGATTAGAAGTGCATTTAGCTCTGATCTGTTTGCAGAGAGTGCACTGATAGACGTGTATGCCAAATGTGGAAACTTAGTTTTTGCTCGCCGTGTGTTTGACATGATGGAAGAGAAGAATGAAGTTTCCTGGAACAGCATTATTTCTGCTTATGGGAGTCACGGTTGCCTTCAGGACTCTCTTGTCCTGTTTCGTGAAATGTTGGGTAATGGGATCCTGCCTGATCATGTCACCTTTCTTGGTATATTATCTGCTTGTGGCCATGCAGGCCAAGTTGATGATGGAATTTTCTACTTCCGTTGCATGATTGAGGAATATGGGATCTCAGCTAGGTCGGAGCATTATGCTTGCATGGTAGATCTATTTGGGCGTGCTGGACGTTTAAGTGAAGCATTTGAAACAATAAAGAGCATGCCATTCTCCCCAGATTCTGGTGTCTGGGGAACATTGCTTGGAGCTTGTCGGGTCCATGGCAATGTTGAGCTTGCTGAAGAGGCATCAAGACATCTTTTTGACGTAGAACCACAAAATTCTGGGTATTATATACTACTCTCAAATATACATGCTGATGCTGGAAAATGGGGGAGTGTGCTTAAGGTTAGAAGTTTGATGAAGGAAAGAGGAGTTCAGAAGGTTCCTGGGTACAGTTGGATCGAGGTTAACAACAGCACTCATATGTTTGTTGCAGCAGATGGAAGTCACCCACAGTCTGCTCAGATATATTCAATGCTCAAGAGTCTTCTTCTTGAACTGAGAAAAGAGGGTTATAATCCTCAACCCTATCTTCCTACACATCCACAAACATCGGGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

785

Amino Acids

86.86

Weight (kDa)

6.81

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21300
fragaria_vesca	FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440 FvH4_2g11440
malus_domestica	MD09G1249500.v1.1 MD17G1242300.v1.1
prunus_persica	Prupe.3G135500_v2.0.a1
pyrus_communis	pycom09g16630 pycom17g24490 pycom17g24500
rosa_chinensis	RchiOBHm_Chr7g0222301
rosa_laevigata	RLG00000002074
rosa_multiflora	Rmu_sc0007069.1_g000017
rosa_roxburghii	Rroxscaffold_3G00237140
rosa_rugosa	Rorug07G0207300 Rorug07G0207300 Rorug07G0207300 Rorug07G0207400 Rorug07G0207500
rosa_samantha	Rh7AG349000 Rh7BG339300 Rh7CG366400 Rh7DG345900
rosa_wichuraiana	Rw7G029520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	294, 2307
AarI	CACCTGC	1 cut(s)	1436
AasI	GACNNNNNNGTC	1 cut(s)	1721
Acc36I	ACCTGC	1 cut(s)	1436
AccB1I	GGYRCC	1 cut(s)	1448
AccB7I	CCANNNNNTGG	3 cut(s)	505, 1365, 1970
AccI	GTMKAC	1 cut(s)	175
AciI	CCGC	2 cut(s)	450, 886
AclWI	GGATC	6 cut(s)	54, 1323, 1747, 1760, 1868, 2198
AcoI	YGGCCR	1 cut(s)	1798
AcsI	RAATTY	5 cut(s)	405, 1119, 1156, 1824, 2068
AcuI	CTGAAG	2 cut(s)	1694, 2049
AfaI	GTAC	6 cut(s)	72, 232, 422, 781, 913, 2183
AfiI	CCNNNNNNNGG	5 cut(s)	100, 505, 1213, 1365, 1970
AflII	CTTAAG	1 cut(s)	2132
AflIII	ACRYGT	2 cut(s)	1290, 1593
AjiI	CACGTC	1 cut(s)	1594
AjnI	CCWGG	2 cut(s)	1667, 2176
AjuI	GAANNNNNNNTTGG	2 cut(s)	753, 785
Alw21I	GWGCWC	1 cut(s)	1585
Alw44I	GTGCAC	1 cut(s)	1581
AlwI	GGATC	6 cut(s)	54, 1323, 1747, 1760, 1868, 2198
AlwNI	CAGNNNCTG	1 cut(s)	1970
AoxI	GGCC	4 cut(s)	882, 1413, 1798, 1807
ApaLI	GTGCAC	1 cut(s)	1581
ApeKI	GCWGC	2 cut(s)	1478, 2225
ApoI	RAATTY	5 cut(s)	405, 1119, 1156, 1824, 2068
AspLEI	GCGC	1 cut(s)	1282
AspS9I	GGNCC	2 cut(s)	883, 2005
AsuHPI	GGTGA	3 cut(s)	402, 1762, 2231
AvaII	GGWCC	1 cut(s)	2005
BaeGI	GKGCMC	1 cut(s)	1585
BalI	TGGCCA	1 cut(s)	1800
BamHI	GGATCC	1 cut(s)	1752
BanI	GGYRCC	1 cut(s)	1448
BanII	GRGCYC	1 cut(s)	1086
BarI	GAAGNNNNNNTAC	2 cut(s)	1267, 1299
BbsI	GAAGAC	1 cut(s)	2270
Bbv12I	GWGCWC	1 cut(s)	1585
BbvI	GCAGC	2 cut(s)	1465, 2237
BccI	CCATC	9 cut(s)	346, 503, 1057, 1122, 1275, 1435, 1639, 1814, 2225
BceAI	ACGGC	1 cut(s)	1614
BciT130I	CCWGG	2 cut(s)	1669, 2178
BciVI	GTATCC	1 cut(s)	581
BclI	TGATCA	2 cut(s)	151, 1762
BfaI	CTAG	2 cut(s)	1008, 1869
BfrI	CTTAAG	1 cut(s)	2132
BfuAI	ACCTGC	1 cut(s)	1436
BfuI	GTATCC	1 cut(s)	581
BglI	GCCNNNNNGGC	1 cut(s)	1806
BglII	AGATCT	1 cut(s)	1897
BisI	GCNGC	2 cut(s)	1479, 2226
BlsI	GCNGC	2 cut(s)	1480, 2227
Bme1390I	CCNGG	2 cut(s)	1669, 2178
Bme18I	GGWCC	1 cut(s)	2005
BmgBI	CACGTC	1 cut(s)	1594
BmgT120I	GGNCC	2 cut(s)	883, 2005
BmiI	GGNNCC	5 cut(s)	1265, 1450, 1754, 2006, 2175
BmrFI	CCNGG	2 cut(s)	1669, 2178
BmsI	GCATC	6 cut(s)	265, 568, 894, 1099, 2045, 2098
BpiI	GAAGAC	1 cut(s)	2270
BpmI	CTGGAG	1 cut(s)	813
BpuEI	CTTGAG	3 cut(s)	1058, 1226, 2255
BsaAI	YACGTR	1 cut(s)	911
BsaJI	CCNNGG	4 cut(s)	320, 1167, 2008, 2177
BsaWI	WCCGGW	1 cut(s)	1018
BsaXI	ACNNNNNCTCC	2 cut(s)	1687, 1717
Bsc4I	CCNNNNNNNGG	5 cut(s)	100, 505, 1213, 1365, 1970
Bse118I	RCCGGY	1 cut(s)	1504
Bse1I	ACTGG	5 cut(s)	332, 499, 830, 868, 1068
Bse3DI	GCAATG	3 cut(s)	858, 1985, 2020
BseBI	CCWGG	2 cut(s)	1669, 2178
BseDI	CCNNGG	4 cut(s)	320, 1167, 2008, 2177
BseGI	GGATG	8 cut(s)	280, 336, 495, 1104, 1236, 1446, 2332, 2355
BseLI	CCNNNNNNNGG	5 cut(s)	100, 505, 1213, 1365, 1970
BseMI	GCAATG	3 cut(s)	858, 1985, 2020
BseMII	CTCAG	6 cut(s)	771, 797, 870, 1878, 2267, 2282
BseNI	ACTGG	5 cut(s)	332, 499, 830, 868, 1068
BseRI	GAGGAG	1 cut(s)	2175
BseSI	GKGCMC	1 cut(s)	1585
BseXI	GCAGC	2 cut(s)	1465, 2237
Bsh1285I	CGRYCG	1 cut(s)	1154
BshFI	GGCC	4 cut(s)	884, 1415, 1800, 1809
BshNI	GGYRCC	1 cut(s)	1448
BsiEI	CGRYCG	1 cut(s)	1154
BsiHKAI	GWGCWC	1 cut(s)	1585
BsiSI	CCGG	2 cut(s)	1019, 1505
BslFI	GGGAC	1 cut(s)	1367
BslI	CCNNNNNNNGG	5 cut(s)	100, 505, 1213, 1365, 1970
BsmFI	GGGAC	1 cut(s)	1367
BsmI	GAATGC	1 cut(s)	676
BsnI	GGCC	4 cut(s)	884, 1415, 1800, 1809
Bsp1286I	GDGCHC	2 cut(s)	1086, 1585
Bsp1407I	TGTACA	1 cut(s)	70
Bsp143I	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
Bsp19I	CCATGG	1 cut(s)	2008
BspACI	CCGC	2 cut(s)	450, 886
BspANI	GGCC	4 cut(s)	884, 1415, 1800, 1809
BspCNI	CTCAG	6 cut(s)	770, 796, 871, 1877, 2266, 2283
BspHI	TCATGA	2 cut(s)	1105, 1539
BspLI	GGNNCC	5 cut(s)	1265, 1450, 1754, 2006, 2175
BspMI	ACCTGC	1 cut(s)	1436
BspPI	GGATC	6 cut(s)	54, 1323, 1747, 1760, 1868, 2198
BspT107I	GGYRCC	1 cut(s)	1448
BspTI	CTTAAG	1 cut(s)	2132
BsrDI	GCAATG	3 cut(s)	858, 1985, 2020
BsrFI	RCCGGY	1 cut(s)	1504
BsrGI	TGTACA	1 cut(s)	70
BsrI	ACTGG	5 cut(s)	332, 499, 830, 868, 1068
BssAI	RCCGGY	1 cut(s)	1504
BssECI	CCNNGG	4 cut(s)	320, 1167, 2008, 2177
BssMI	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
BssT1I	CCWWGG	3 cut(s)	320, 1167, 2008
Bst2UI	CCWGG	2 cut(s)	1669, 2178
Bst4CI	ACNGT	4 cut(s)	1463, 1703, 2186, 2247
Bst6I	CTCTTC	3 cut(s)	1404, 1644, 2025
BstAFI	CTTAAG	1 cut(s)	2132
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstAUI	TGTACA	1 cut(s)	70
BstBAI	YACGTR	1 cut(s)	911
BstDEI	CTNAG	8 cut(s)	279, 757, 783, 879, 1615, 1864, 2253, 2291
BstDSI	CCRYGG	1 cut(s)	2008
BstF5I	GGATG	8 cut(s)	280, 336, 495, 1104, 1236, 1446, 2332, 2355
BstHHI	GCGC	1 cut(s)	1282
BstKTI	GATC	9 cut(s)	62, 154, 1318, 1567, 1755, 1765, 1863, 1900, 2193
BstMBI	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
BstMCI	CGRYCG	1 cut(s)	1154
BstMWI	GCNNNNNNNGC	8 cut(s)	304, 761, 793, 1064, 1487, 1580, 1806, 2033
BstNI	CCWGG	2 cut(s)	1669, 2178
BstNSI	RCATGY	4 cut(s)	194, 1294, 1954, 2105
BstSCI	CCNGG	2 cut(s)	1667, 2176
BstSLI	GKGCMC	1 cut(s)	1585
BstV1I	GCAGC	2 cut(s)	1465, 2237
BstV2I	GAAGAC	1 cut(s)	2270
BstX2I	RGATCY	5 cut(s)	59, 1315, 1752, 1860, 1897
BstYI	RGATCY	5 cut(s)	59, 1315, 1752, 1860, 1897
BsuI	GTATCC	1 cut(s)	581
BsuRI	GGCC	4 cut(s)	884, 1415, 1800, 1809
BtgI	CCRYGG	1 cut(s)	2008
BtgZI	GCGATG	1 cut(s)	1010
BtrI	CACGTC	1 cut(s)	1594
BtsCI	GGATG	8 cut(s)	280, 336, 495, 1104, 1236, 1446, 2332, 2355
BtsI	GCAGTG	3 cut(s)	117, 208, 729
BtsIMutI	CAGTG	6 cut(s)	117, 208, 729, 837, 875, 1583
BveI	ACCTGC	1 cut(s)	1436
CaiI	CAGNNNCTG	1 cut(s)	1970
CciI	TCATGA	2 cut(s)	1105, 1539
CfoI	GCGC	1 cut(s)	1282
Cfr10I	RCCGGY	1 cut(s)	1504
Cfr13I	GGNCC	2 cut(s)	883, 2005
Csp6I	GTAC	6 cut(s)	71, 231, 421, 780, 912, 2182
CviQI	GTAC	6 cut(s)	71, 231, 421, 780, 912, 2182
DdeI	CTNAG	8 cut(s)	279, 757, 783, 879, 1615, 1864, 2253, 2291
DpnI	GATC	9 cut(s)	61, 153, 1317, 1566, 1754, 1764, 1862, 1899, 2192
DpnII	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
DrdI	GACNNNNNNGTC	1 cut(s)	1721
DseDI	GACNNNNNNGTC	1 cut(s)	1721
EaeI	YGGCCR	1 cut(s)	1798
Eam1104I	CTCTTC	3 cut(s)	1404, 1644, 2025
EarI	CTCTTC	3 cut(s)	1404, 1644, 2025
Eco130I	CCWWGG	3 cut(s)	320, 1167, 2008
Eco24I	GRGCYC	1 cut(s)	1086
Eco32I	GATATC	1 cut(s)	942
Eco47I	GGWCC	1 cut(s)	2005
Eco57I	CTGAAG	2 cut(s)	1694, 2049
EcoRI	GAATTC	1 cut(s)	1156
EcoRII	CCWGG	2 cut(s)	1667, 2176
EcoRV	GATATC	1 cut(s)	942
EcoT14I	CCWWGG	3 cut(s)	320, 1167, 2008
EcoT22I	ATGCAT	2 cut(s)	583, 1114
EcoT38I	GRGCYC	1 cut(s)	1086
ErhI	CCWWGG	3 cut(s)	320, 1167, 2008
FalI	AAGNNNNNCTT	2 cut(s)	272, 304
FaqI	GGGAC	1 cut(s)	1367
FauI	CCCGC	1 cut(s)	893
FauNDI	CATATG	2 cut(s)	1361, 2214
FbaI	TGATCA	2 cut(s)	151, 1762
FblI	GTMKAC	1 cut(s)	175
Fnu4HI	GCNGC	2 cut(s)	1479, 2226
FokI	GGATG	7 cut(s)	287, 343, 482, 1111, 1223, 1453, 2319
FriOI	GRGCYC	1 cut(s)	1086
Fsp4HI	GCNGC	2 cut(s)	1479, 2226
FspBI	CTAG	2 cut(s)	1008, 1869
GlaI	GCGC	1 cut(s)	1281
GluI	GCNGC	2 cut(s)	1479, 2226
GsuI	CTGGAG	1 cut(s)	813
HaeIII	GGCC	4 cut(s)	884, 1415, 1800, 1809
HapII	CCGG	2 cut(s)	1019, 1505
HhaI	GCGC	1 cut(s)	1282
Hin6I	GCGC	1 cut(s)	1280
HinP1I	GCGC	1 cut(s)	1280
HincII	GTYRAC	1 cut(s)	2200
HindII	GTYRAC	1 cut(s)	2200
HindIII	AAGCTT	3 cut(s)	141, 296, 444
HpaI	GTTAAC	1 cut(s)	2200
HpaII	CCGG	2 cut(s)	1019, 1505
HphI	GGTGA	3 cut(s)	402, 1762, 2231
Hpy166II	GTNNAC	7 cut(s)	176, 206, 345, 423, 559, 1583, 2200
Hpy188I	TCNGA	6 cut(s)	760, 880, 1564, 1876, 2169, 2256
Hpy8I	GTNNAC	7 cut(s)	176, 206, 345, 423, 559, 1583, 2200
HpyAV	CCTTC	5 cut(s)	98, 1254, 1718, 2146, 2164
HpyCH4III	ACNGT	4 cut(s)	1463, 1703, 2186, 2247
HpyCH4IV	ACGT	5 cut(s)	728, 910, 1593, 1918, 2055
HpyF10VI	GCNNNNNNNGC	8 cut(s)	304, 761, 793, 1064, 1487, 1580, 1806, 2033
HpyF3I	CTNAG	8 cut(s)	279, 757, 783, 879, 1615, 1864, 2253, 2291
HpySE526I	ACGT	5 cut(s)	728, 910, 1593, 1918, 2055
HspAI	GCGC	1 cut(s)	1280
Ksp22I	TGATCA	2 cut(s)	151, 1762
KspAI	GTTAAC	1 cut(s)	2200
Kzo9I	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
LmnI	GCTCC	4 cut(s)	264, 1269, 1876, 1994
Lsp1109I	GCAGC	2 cut(s)	1465, 2237
LweI	GCATC	6 cut(s)	265, 568, 894, 1099, 2045, 2098
MaeI	CTAG	2 cut(s)	1008, 1869
MaeII	ACGT	5 cut(s)	728, 910, 1593, 1918, 2055
MaeIII	GTNAC	7 cut(s)	356, 724, 922, 1131, 1697, 1768, 2237
MalI	GATC	9 cut(s)	61, 153, 1317, 1566, 1754, 1764, 1862, 1899, 2192
MboI	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
MfeI	CAATTG	1 cut(s)	548
MflI	RGATCY	5 cut(s)	59, 1315, 1752, 1860, 1897
MhlI	GDGCHC	2 cut(s)	1086, 1585
MlsI	TGGCCA	1 cut(s)	1800
MluNI	TGGCCA	1 cut(s)	1800
MlyI	GAGTC	4 cut(s)	1016, 1705, 1709, 2284
MmeI	TCCRAC	7 cut(s)	190, 658, 795, 801, 1346, 1854, 2168
Mox20I	TGGCCA	1 cut(s)	1800
Mph1103I	ATGCAT	2 cut(s)	583, 1114
MscI	TGGCCA	1 cut(s)	1800
MseI	TTAA	9 cut(s)	96, 387, 441, 651, 711, 1137, 1922, 2133, 2199
MslI	CAYNNNNRTG	5 cut(s)	189, 645, 2013, 2106, 2213
Msp20I	TGGCCA	1 cut(s)	1800
MspA1I	CMGCKG	1 cut(s)	1478
MspCI	CTTAAG	1 cut(s)	2132
MspI	CCGG	2 cut(s)	1019, 1505
MspR9I	CCNGG	2 cut(s)	1669, 2178
MunI	CAATTG	1 cut(s)	548
Mva1269I	GAATGC	1 cut(s)	676
MvaI	CCWGG	2 cut(s)	1669, 2178
MwoI	GCNNNNNNNGC	8 cut(s)	304, 761, 793, 1064, 1487, 1580, 1806, 2033
NcoI	CCATGG	1 cut(s)	2008
NdeI	CATATG	2 cut(s)	1361, 2214
NdeII	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
NlaIV	GGNNCC	5 cut(s)	1265, 1450, 1754, 2006, 2175
NmuCI	GTSAC	5 cut(s)	724, 922, 1697, 1768, 2237
NsiI	ATGCAT	2 cut(s)	583, 1114
NspI	RCATGY	4 cut(s)	194, 1294, 1954, 2105
PaeI	GCATGC	1 cut(s)	1954
PagI	TCATGA	2 cut(s)	1105, 1539
PaqCI	CACCTGC	1 cut(s)	1436
PciI	ACATGT	1 cut(s)	1290
PctI	GAATGC	1 cut(s)	676
PfeI	GAWTC	6 cut(s)	544, 662, 824, 1102, 1528, 1967
PflMI	CCANNNNNTGG	3 cut(s)	505, 1365, 1970
PfoI	TCCNGGA	1 cut(s)	1667
PkrI	GCNGC	2 cut(s)	1480, 2227
PleI	GAGTC	4 cut(s)	1016, 1704, 1709, 2283
PpsI	GAGTC	4 cut(s)	1016, 1704, 1709, 2283
Ppu21I	YACGTR	1 cut(s)	911
PscI	ACATGT	1 cut(s)	1290
PsiI	TTATAA	2 cut(s)	294, 2307
Psp6I	CCWGG	2 cut(s)	1667, 2176
PspGI	CCWGG	2 cut(s)	1667, 2176
PspN4I	GGNNCC	5 cut(s)	1265, 1450, 1754, 2006, 2175
PspPI	GGNCC	2 cut(s)	883, 2005
PstNI	CAGNNNCTG	1 cut(s)	1970
PsuI	RGATCY	5 cut(s)	59, 1315, 1752, 1860, 1897
PvuII	CAGCTG	1 cut(s)	1478
RsaI	GTAC	6 cut(s)	72, 232, 422, 781, 913, 2183
RsaNI	GTAC	6 cut(s)	71, 231, 421, 780, 912, 2182
RseI	CAYNNNNRTG	5 cut(s)	189, 645, 2013, 2106, 2213
SaqAI	TTAA	9 cut(s)	96, 387, 441, 651, 711, 1137, 1922, 2133, 2199
SatI	GCNGC	2 cut(s)	1479, 2226
Sau3AI	GATC	9 cut(s)	59, 151, 1315, 1564, 1752, 1762, 1860, 1897, 2190
Sau96I	GGNCC	2 cut(s)	883, 2005
SchI	GAGTC	4 cut(s)	1016, 1705, 1709, 2284
ScrFI	CCNGG	2 cut(s)	1669, 2178
SduI	GDGCHC	2 cut(s)	1086, 1585
SfaNI	GCATC	6 cut(s)	265, 568, 894, 1099, 2045, 2098
SfiI	GGCCNNNNNGGCC	1 cut(s)	1806
SinI	GGWCC	1 cut(s)	2005
SmiMI	CAYNNNNRTG	5 cut(s)	189, 645, 2013, 2106, 2213
SmlI	CTYRAG	4 cut(s)	1073, 1241, 2132, 2270
SmoI	CTYRAG	4 cut(s)	1073, 1241, 2132, 2270
SphI	GCATGC	1 cut(s)	1954
SsiI	CCGC	2 cut(s)	450, 886
SspMI	CTAG	2 cut(s)	1008, 1869
StyD4I	CCNGG	2 cut(s)	1667, 2176
StyI	CCWWGG	3 cut(s)	320, 1167, 2008
TaaI	ACNGT	4 cut(s)	1463, 1703, 2186, 2247
TaiI	ACGT	5 cut(s)	731, 913, 1596, 1921, 2058
TaqI	TCGA	2 cut(s)	665, 2193
TaqII	GACCGA	1 cut(s)	1168
TatI	WGTACW	2 cut(s)	70, 420
TfiI	GAWTC	6 cut(s)	544, 662, 824, 1102, 1528, 1967
Tru1I	TTAA	9 cut(s)	96, 387, 441, 651, 711, 1137, 1922, 2133, 2199
Tru9I	TTAA	9 cut(s)	96, 387, 441, 651, 711, 1137, 1922, 2133, 2199
TscAI	CASTG	6 cut(s)	117, 208, 729, 837, 875, 1590
TseFI	GTSAC	5 cut(s)	724, 922, 1697, 1768, 2237
TseI	GCWGC	2 cut(s)	1478, 2225
Tsp45I	GTSAC	5 cut(s)	724, 922, 1697, 1768, 2237
TspGWI	ACGGA	4 cut(s)	672, 948, 1272, 1826
TspRI	CASTG	6 cut(s)	117, 208, 729, 837, 875, 1590
Van91I	CCANNNNNTGG	3 cut(s)	505, 1365, 1970
Vha464I	CTTAAG	1 cut(s)	2132
VneI	GTGCAC	1 cut(s)	1581
VpaK11BI	GGWCC	1 cut(s)	2005
XapI	RAATTY	5 cut(s)	405, 1119, 1156, 1824, 2068
XceI	RCATGY	4 cut(s)	194, 1294, 1954, 2105
XcmI	CCANNNNNNNNNTGG	2 cut(s)	502, 1817
XmiI	GTMKAC	1 cut(s)	175
XspI	CTAG	2 cut(s)	1008, 1869
Zsp2I	ATGCAT	2 cut(s)	583, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.