FvH4_2g12120

Leucine-rich repeat receptor-like tyrosine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0008490
Physical Location & Seq
Forward (+)
10640376 .. 10644474
4099 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g12120.t1

Sequence Viewer

Length: 2877 bp
ATGTTTGGCTGGTTTAGCTCACAGCTCACAATGGCAAGGTATTGCCACAACCACAACACTCCTTTTTACTTGTGTTTCTTCTTGTTCTGTTATCCTCTTATTCCTATTGTCCTGTCTGAACTATCCTCAACCCAAATAACTACCATGATCAATATCTCCAACAGTCTAAACAGTAGTGGTAGCACTGTTTCATGGAACATAAAGAGTGAACCAAACCCATGTTTATGGAAAGGGGTCGAGTGTAATCCACCCAACTCAACTGTAACCCAAATTTCTCTCTCCAAGTTGTTTCTGTCTTCCTCAGATTTTCTCCCAATTGTCTGCCAACTTGAGTCTTTGCAGATTCTTGATGTGTCAGAAAACCACCTGAGAACAATCCCTTCTGGGTTTCTCACTGCTTGTGGAAAATTAGATGGGCTAAAGCTACTCAATTTCAGTTTTAACAATCTGCTCGGTTCTTTACCTGCCTTTGTTGGGTTCTCTGGGTTGGAGTCCTTGGACCTTTCTCATAATAATTTGAGTCAAGGCATTGACTCAGAGCTGTTGGGTGGTTTGGTTGCGCTCAGAAGCTTGAACCTCAGCTTCAACAACTTTAGTGGGACTATTCCTACCCGACTTGGGAGATCCATGCTCTTGGAGAAGCTTGTGCTTTCTGCCAATAAATTTGACGGGATAATTCCAGGTGAAATCGTGGACTACCGCAATCTGACTCTGATTGATTTGAGTGCAAATCAAATTTCTGGTTCAGTTTCTGAGAGTTTTGGAGAGCTATCCAAGTTGGAGGTTCTGATTCTATCTTCCAACATCTTAAGTGGCATAATCCCAGAAAGCCTTTCGAATATCACAAGCCTCACGCGGTTTGCAGCAAATTCTAACAAGTTCGGGGGTCCAGTTCCTGGTGGAATCACAAAGCATCTCAAAAATTTGGACCTGAGTTATAACAGCTTGAGTGGGTCGATTCCATCAGACCTTTTGTCTCCATTGAATTCGAACTTGCAGACTGTGGATTTGTCTAATAACTTGTTGCAGGGATCAATACCCACGCCTCTGTCTCCGGAACTGGTTCGGTTGAGATTAGGAAGCAATTCACTTGTTGGAATGATACCTTCTGTGACACTCCAGAACTTGGTATACATGGAAATGGAAAACAATAAGCTGAATGGTTCCATACCTCCTGAATTGGGTTCATGCAGCAATTTGGCTCTGTTGAACTTGGCTCAGAATGGACTGACTGGGGCTTTGCCGCCGCAGTTGGGGAACCTCACTAAACTTCAAGTTTTGAAACTTCAGTCTAATAATCTTGCTGGAGGAATCCCAACTGAGTTTACTGAACTAAGGAGCTTGTCTGTTTTGAATATCAGCTGGAATGCTCTGAATGGTTCAATACCAACAACAGTTTCAAACTTGCAGAAGCTTATTAACATGAACCTACAAGGCAACAATCTCAGTGGTTCCATCCCCAACACTATTGCCTCCATGAGTTCTCTGTTGGAACTCCAACTTAGTCACAATTTCTTGAGTGGTGACATTCCAAGGATGCCAACATCTTTGCAGATTGCTTTGAATCTCAGCACCAACCTTTTTGAAGGACCGATTCCTAGTCATCTGTCCATGCTCACTGGATTAGAAATTTTGGATCTATCTAACAACAAGTTCTCAGGTCAGATACCCTCATTTTTAGCTGATCAACTGGTAGCATTGACACAGTTGATACTATCTAACAATCAGCTCTCTGGAGTCTCTCCACACTTCAATACTTGGGTCATGGTCAACACAGATGGAAATGCAGGTTTAATTAAAGCTACAACGCCCTCCTTGGTAAAGAAAGGAAATTCAAAGGCTTTGCCAATTGCTCTTGCAGTTGTAGCTGGTGTTGTTGCTATTGTAGCCATTGCCATCCTTGCTATATCACGGCACAGTTACAGGGTTAACGATGAACAAGTGGACTCCGGGGAAGATCTTCCTCCTCCTGAGGTCCTCCAAGGTAGTCTCTTAACTGCCAATGCCATTCACAGATCAAGTATCGATTTCACTACAGCCATGGAGGTAGTTTCTGACCCCTCAAACATTGAGCTCAAGACTAGGTTTTCAACTTACTACAAAGCCACCATGCCGTCTGGATCGAGCTACTTTGTCAAGAAACTTAACTGGAGTGACAAGATATTCCAATTGGGCAGCCACGACAGATTCGAGAACGATTTACAGATCTTTGGAAAACTGAGCAATTCCAATGTCATGACTCCTTTGGCCCATGTTACAACTGTTGACAGTGCTTATCTGTTCTATGAGTATGCTCCAAAAGGCACCCTTTTTGATGCTCTTCATTGTAGCTCAGACAATTCTATGGATTGGGCAAGTAGATACAGTATAGCGATTGGAATAGCTCAGGGCCTCGCTTTTCTTCATGGATGCACCTCAGGTCCAATACTTCTCCTAGACCTGTCAAGCCGAAGCATTTTGCTCAAGTCCCTCAAAGAGCCTCTTATTGGAGACGCCGAGCTCTGCAAAGTGATTGATCCCTCAAAGAGCACTGGAAGCCTTTCCACTGTTGCTGGTTCTGTTGGTTATATTCCTCCAGAGTATGCATACACTATGAGGGTAACAGTGGCCGGTAACATCTACAGCTTTGGGGTGATTCTGCTTGAATTGCTGACAGGAAAGCCAGCAGTTAGTGAAGGGATTGAGTTGGCCAATTGGGTACTGAGTAAATCAGGGCAGCAAGATAAAATTCTTGATTCTACAATCAGCAGAACCTCAAGTGCCATCAGAAGCCAGATGTTAGCTGTACTGAAAGTTGCTCTTGGTTGTGTTAGTGTATCACCAGAAGCAAGGCCAAGAATGAAGAGCGTTCTTAGGATGCTTCTGAATGCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

959

Amino Acids

103.03

Weight (kDa)

6.1

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 82 9.9e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 112 - 173 1.7e-06 Leucine rich repeat
LRR_8 PF13855 140 - 198 7.7e-06 Leucine rich repeat
LRR_14 PF23598 151 - 400 4.3e-06 Leucine-rich repeat region
LRR_4 PF12799 163 - 202 5.7e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 391 - 503 2.2e-09 Leucine-rich repeat region
LRR_8 PF13855 398 - 458 7.1e-06 Leucine rich repeat
Pkinase PF00069 696 - 952 1.5e-19 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 725 - 953 5.9e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 939
Acc36I ACCTGC 2 cut(s) 472, 1778
AccB1I GGYRCC 1 cut(s) 2303
AccB7I CCANNNNNTGG 2 cut(s) 896, 1126
AccI GTMKAC 1 cut(s) 1131
AccII CGCG 1 cut(s) 856
AccIII TCCGGA 1 cut(s) 1054
AciI CCGC 4 cut(s) 700, 856, 1244, 1247
AclWI GGATC 5 cut(s) 618, 1039, 1644, 2128, 2510
AcoI YGGCCR 2 cut(s) 2607, 2688
AcsI RAATTY 9 cut(s) 270, 662, 735, 868, 922, 985, 1629, 1831, 2727
AcuI CTGAAG 1 cut(s) 1271
AcyI GRCGYC 1 cut(s) 2493
AfaI GTAC 2 cut(s) 2700, 2787
AfiI CCNNNNNNNGG 7 cut(s) 474, 618, 896, 1126, 1181, 1253, 2486
AflII CTTAAG 1 cut(s) 808
AhdI GACNNNNNGTC 1 cut(s) 973
AjnI CCWGG 2 cut(s) 679, 895
AjuI GAANNNNNNNTTGG 2 cut(s) 1381, 1413
Alw21I GWGCWC 3 cut(s) 2076, 2502, 2531
Alw26I GTCTC 5 cut(s) 981, 1056, 1744, 1994, 2484
AlwI GGATC 5 cut(s) 618, 1039, 1644, 2128, 2510
AlwNI CAGNNNCTG 2 cut(s) 752, 896
Aor13HI TCCGGA 1 cut(s) 1054
AoxI GGCC 5 cut(s) 2247, 2389, 2607, 2688, 2831
ApeKI GCWGC 4 cut(s) 863, 1191, 2175, 2716
ApoI RAATTY 9 cut(s) 270, 662, 735, 868, 922, 985, 1629, 1831, 2727
ArsI GACNNNNNNTTYG 4 cut(s) 991, 1023, 1222, 1254
Asp700I GAANNNNTTC 4 cut(s) 1062, 1084, 1959, 2539
AspLEI GCGC 1 cut(s) 562
AspS9I GGNCC 8 cut(s) 499, 887, 928, 1589, 1975, 2248, 2389, 2420
AsuC2I CCSGG 1 cut(s) 1951
AsuHPI GGTGA 4 cut(s) 695, 1535, 2644, 2811
AsuII TTCGAA 2 cut(s) 836, 989
AvaII GGWCC 6 cut(s) 499, 887, 928, 1589, 1975, 2420
AxyI CCTNAGG 2 cut(s) 1971, 2416
BalI TGGCCA 1 cut(s) 2690
BanI GGYRCC 1 cut(s) 2303
BanII GRGCYC 2 cut(s) 2076, 2502
BbsI GAAGAC 1 cut(s) 288
Bbv12I GWGCWC 3 cut(s) 2076, 2502, 2531
BbvCI CCTCAGC 1 cut(s) 578
BbvI GCAGC 4 cut(s) 875, 1203, 2187, 2728
BccI CCATC 6 cut(s) 407, 970, 1463, 1772, 1904, 2771
BceAI ACGGC 2 cut(s) 1928, 2098
BciT130I CCWGG 2 cut(s) 681, 897
BclI TGATCA 2 cut(s) 147, 1684
BcnI CCSGG 1 cut(s) 1951
BcoDI GTCTC 5 cut(s) 981, 1056, 1744, 1994, 2484
BfaI CTAG 3 cut(s) 1599, 2082, 2435
BfmI CTRYAG 2 cut(s) 2034, 2620
BfrI CTTAAG 1 cut(s) 808
BfuAI ACCTGC 2 cut(s) 472, 1778
BglII AGATCT 2 cut(s) 1957, 2205
BisI GCNGC 6 cut(s) 864, 1192, 1244, 1247, 2176, 2717
BlsI GCNGC 6 cut(s) 865, 1193, 1245, 1248, 2177, 2718
Bme1390I CCNGG 3 cut(s) 681, 897, 1951
Bme18I GGWCC 6 cut(s) 499, 887, 928, 1589, 1975, 2420
BmeRI GACNNNNNGTC 1 cut(s) 973
BmgT120I GGNCC 8 cut(s) 499, 887, 928, 1589, 1975, 2248, 2389, 2420
BmiI GGNNCC 5 cut(s) 888, 1165, 1259, 1453, 2305
BmrFI CCNGG 3 cut(s) 681, 897, 1951
BmrI ACTGGG 1 cut(s) 1242
BmsI GCATC 5 cut(s) 922, 1527, 2305, 2399, 2847
BmuI ACTGGG 1 cut(s) 1242
BpiI GAAGAC 1 cut(s) 288
BpmI CTGGAG 5 cut(s) 1103, 1326, 1755, 2170, 2559
Bpu10I CCTNAGC 2 cut(s) 578, 2385
Bpu14I TTCGAA 2 cut(s) 836, 989
BpuEI CTTGAG 6 cut(s) 350, 967, 1537, 2060, 2447, 2740
BpuMI CCSGG 1 cut(s) 1951
Bsa29I ATCGAT 1 cut(s) 2025
BsaBI GATNNNNATC 1 cut(s) 152
BsaHI GRCGYC 1 cut(s) 2493
BsaJI CCNNGG 6 cut(s) 495, 1532, 1815, 1950, 1981, 2040
BsaWI WCCGGW 1 cut(s) 1054
Bsc4I CCNNNNNNNGG 7 cut(s) 474, 618, 896, 1126, 1181, 1253, 2486
Bse118I RCCGGY 1 cut(s) 2609
Bse1I ACTGG 7 cut(s) 890, 1065, 1237, 1624, 1695, 2153, 2536
Bse21I CCTNAGG 2 cut(s) 1971, 2416
Bse3DI GCAATG 1 cut(s) 1890
Bse8I GATNNNNATC 1 cut(s) 152
BseAI TCCGGA 1 cut(s) 1054
BseBI CCWGG 2 cut(s) 681, 897
BseCI ATCGAT 1 cut(s) 2025
BseDI CCNNGG 6 cut(s) 495, 1532, 1815, 1950, 1981, 2040
BseGI GGATG 5 cut(s) 1455, 1542, 1896, 2414, 2862
BseJI GATNNNNATC 1 cut(s) 152
BseLI CCNNNNNNNGG 7 cut(s) 474, 618, 896, 1126, 1181, 1253, 2486
BseMI GCAATG 1 cut(s) 1890
BseNI ACTGG 7 cut(s) 890, 1065, 1237, 1624, 1695, 2153, 2536
BseRI GAGGAG 1 cut(s) 1956
BseXI GCAGC 4 cut(s) 875, 1203, 2187, 2728
Bsh1236I CGCG 1 cut(s) 856
BshFI GGCC 5 cut(s) 2249, 2391, 2609, 2690, 2833
BshNI GGYRCC 1 cut(s) 2303
BshVI ATCGAT 1 cut(s) 2025
BsiHKAI GWGCWC 3 cut(s) 2076, 2502, 2531
BsiSI CCGG 3 cut(s) 1055, 1950, 2610
BslFI GGGAC 2 cut(s) 613, 2452
BslI CCNNNNNNNGG 7 cut(s) 474, 618, 896, 1126, 1181, 1253, 2486
BsmAI GTCTC 5 cut(s) 981, 1056, 1744, 1994, 2484
BsmBI CGTCTC 1 cut(s) 2484
BsmFI GGGAC 2 cut(s) 613, 2452
BsmI GAATGC 2 cut(s) 1372, 2872
BsnI GGCC 5 cut(s) 2249, 2391, 2609, 2690, 2833
Bsp119I TTCGAA 2 cut(s) 836, 989
Bsp1286I GDGCHC 3 cut(s) 2076, 2502, 2531
Bsp13I TCCGGA 1 cut(s) 1054
Bsp19I CCATGG 1 cut(s) 2040
BspACI CCGC 4 cut(s) 700, 856, 1244, 1247
BspANI GGCC 5 cut(s) 2249, 2391, 2609, 2690, 2833
BspDI ATCGAT 1 cut(s) 2025
BspEI TCCGGA 1 cut(s) 1054
BspFNI CGCG 1 cut(s) 856
BspHI TCATGA 1 cut(s) 2235
BspLI GGNNCC 5 cut(s) 888, 1165, 1259, 1453, 2305
BspMI ACCTGC 2 cut(s) 472, 1778
BspPI GGATC 5 cut(s) 618, 1039, 1644, 2128, 2510
BspQI GCTCTTC 2 cut(s) 2325, 2837
BspT104I TTCGAA 2 cut(s) 836, 989
BspT107I GGYRCC 1 cut(s) 2303
BspTI CTTAAG 1 cut(s) 808
BsrDI GCAATG 1 cut(s) 1890
BsrFI RCCGGY 1 cut(s) 2609
BsrI ACTGG 7 cut(s) 890, 1065, 1237, 1624, 1695, 2153, 2536
BssAI RCCGGY 1 cut(s) 2609
BssECI CCNNGG 6 cut(s) 495, 1532, 1815, 1950, 1981, 2040
BssNAI GTATAC 1 cut(s) 1132
BssNI GRCGYC 1 cut(s) 2493
BssT1I CCWWGG 5 cut(s) 495, 1532, 1815, 1981, 2040
Bst1107I GTATAC 1 cut(s) 1132
Bst2UI CCWGG 2 cut(s) 681, 897
Bst6I CTCTTC 2 cut(s) 2325, 2837
BstACI GRCGYC 1 cut(s) 2493
BstAFI CTTAAG 1 cut(s) 808
BstBI TTCGAA 2 cut(s) 836, 989
BstC8I GCNNGC 1 cut(s) 2664
BstDSI CCRYGG 1 cut(s) 2040
BstF5I GGATG 5 cut(s) 1455, 1542, 1896, 2414, 2862
BstFNI CGCG 1 cut(s) 856
BstHHI GCGC 1 cut(s) 562
BstMAI GTCTC 5 cut(s) 981, 1056, 1744, 1994, 2484
BstMWI GCNNNNNNNGC 6 cut(s) 15, 1865, 1886, 1901, 2535, 2647
BstNI CCWGG 2 cut(s) 681, 897
BstSCI CCNGG 3 cut(s) 679, 895, 1949
BstSFI CTRYAG 2 cut(s) 2034, 2620
BstUI CGCG 1 cut(s) 856
BstV1I GCAGC 4 cut(s) 875, 1203, 2187, 2728
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 4 cut(s) 623, 1636, 1957, 2205
BstXI CCANNNNNNTGG 2 cut(s) 225, 634
BstYI RGATCY 4 cut(s) 623, 1636, 1957, 2205
BstZ17I GTATAC 1 cut(s) 1132
Bsu15I ATCGAT 1 cut(s) 2025
Bsu36I CCTNAGG 2 cut(s) 1971, 2416
BsuRI GGCC 5 cut(s) 2249, 2391, 2609, 2690, 2833
BsuTUI ATCGAT 1 cut(s) 2025
BtgI CCRYGG 1 cut(s) 2040
BtsCI GGATG 5 cut(s) 1455, 1542, 1896, 2414, 2862
BtsI GCAGTG 1 cut(s) 393
BtsIMutI CAGTG 8 cut(s) 183, 393, 1453, 1617, 2275, 2529, 2544, 2610
BveI ACCTGC 2 cut(s) 472, 1778
Cac8I GCNNGC 1 cut(s) 2664
CaiI CAGNNNCTG 2 cut(s) 752, 896
CciI TCATGA 1 cut(s) 2235
CfoI GCGC 1 cut(s) 562
Cfr10I RCCGGY 1 cut(s) 2609
Cfr13I GGNCC 8 cut(s) 499, 887, 928, 1589, 1975, 2248, 2389, 2420
ClaI ATCGAT 1 cut(s) 2025
CseI GACGC 1 cut(s) 2501
Csp6I GTAC 2 cut(s) 2699, 2786
CspCI CAANNNNNGTGG 4 cut(s) 577, 612, 1429, 1464
CviQI GTAC 2 cut(s) 2699, 2786
DriI GACNNNNNGTC 1 cut(s) 973
EaeI YGGCCR 2 cut(s) 2607, 2688
Eam1104I CTCTTC 2 cut(s) 2325, 2837
Eam1105I GACNNNNNGTC 1 cut(s) 973
EarI CTCTTC 2 cut(s) 2325, 2837
Ecl136II GAGCTC 2 cut(s) 2074, 2500
Eco130I CCWWGG 5 cut(s) 495, 1532, 1815, 1981, 2040
Eco24I GRGCYC 2 cut(s) 2076, 2502
Eco47I GGWCC 6 cut(s) 499, 887, 928, 1589, 1975, 2420
Eco53kI GAGCTC 2 cut(s) 2074, 2500
Eco57I CTGAAG 1 cut(s) 1271
Eco81I CCTNAGG 2 cut(s) 1971, 2416
EcoICRI GAGCTC 2 cut(s) 2074, 2500
EcoO109I RGGNCCY 2 cut(s) 1975, 2389
EcoRI GAATTC 1 cut(s) 985
EcoRII CCWGG 2 cut(s) 679, 895
EcoT14I CCWWGG 5 cut(s) 495, 1532, 1815, 1981, 2040
EcoT22I ATGCAT 1 cut(s) 2587
EcoT38I GRGCYC 2 cut(s) 2076, 2502
ErhI CCWWGG 5 cut(s) 495, 1532, 1815, 1981, 2040
Esp3I CGTCTC 1 cut(s) 2484
FalI AAGNNNNNCTT 6 cut(s) 2292, 2324, 2466, 2498, 2784, 2816
FaqI GGGAC 2 cut(s) 613, 2452
FbaI TGATCA 2 cut(s) 147, 1684
FblI GTMKAC 1 cut(s) 1131
Fnu4HI GCNGC 6 cut(s) 864, 1192, 1244, 1247, 2176, 2717
FokI GGATG 5 cut(s) 1442, 1549, 1883, 2421, 2869
FriOI GRGCYC 2 cut(s) 2076, 2502
Fsp4HI GCNGC 6 cut(s) 864, 1192, 1244, 1247, 2176, 2717
FspBI CTAG 3 cut(s) 1599, 2082, 2435
GlaI GCGC 1 cut(s) 561
GluI GCNGC 6 cut(s) 864, 1192, 1244, 1247, 2176, 2717
GsuI CTGGAG 5 cut(s) 1103, 1326, 1755, 2170, 2559
HaeIII GGCC 5 cut(s) 2249, 2391, 2609, 2690, 2833
HapII CCGG 3 cut(s) 1055, 1950, 2610
HgaI GACGC 1 cut(s) 2501
HhaI GCGC 1 cut(s) 562
Hin1I GRCGYC 1 cut(s) 2493
Hin6I GCGC 1 cut(s) 560
HinP1I GCGC 1 cut(s) 560
HincII GTYRAC 3 cut(s) 1771, 1930, 2266
HindII GTYRAC 3 cut(s) 1771, 1930, 2266
HindIII AAGCTT 3 cut(s) 568, 641, 1412
HpaI GTTAAC 1 cut(s) 1930
HpaII CCGG 3 cut(s) 1055, 1950, 2610
HphI GGTGA 4 cut(s) 695, 1535, 2644, 2811
Hpy166II GTNNAC 8 cut(s) 209, 694, 1132, 1326, 1771, 1930, 1945, 2266
Hpy8I GTNNAC 8 cut(s) 209, 694, 1132, 1326, 1771, 1930, 1945, 2266
HpyAV CCTTC 4 cut(s) 390, 1116, 1580, 2669
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 1865, 1886, 1901, 2535, 2647
Hsp92I GRCGYC 1 cut(s) 2493
HspAI GCGC 1 cut(s) 560
Kpn2I TCCGGA 1 cut(s) 1054
Ksp22I TGATCA 2 cut(s) 147, 1684
KspAI GTTAAC 1 cut(s) 1930
LguI GCTCTTC 2 cut(s) 2325, 2837
LmnI GCTCC 2 cut(s) 1338, 2299
Lsp1109I GCAGC 4 cut(s) 875, 1203, 2187, 2728
LweI GCATC 5 cut(s) 922, 1527, 2305, 2399, 2847
MaeI CTAG 3 cut(s) 1599, 2082, 2435
MaeIII GTNAC 9 cut(s) 262, 1111, 1505, 1523, 1919, 2153, 2254, 2599, 2612
MboII GAAGA 8 cut(s) 70, 288, 789, 1952, 1967, 2312, 2393, 2854
MfeI CAATTG 4 cut(s) 315, 1848, 2168, 2692
MflI RGATCY 4 cut(s) 623, 1636, 1957, 2205
MhlI GDGCHC 3 cut(s) 2076, 2502, 2531
MlsI TGGCCA 1 cut(s) 2690
MluNI TGGCCA 1 cut(s) 2690
MlyI GAGTC 8 cut(s) 341, 500, 527, 529, 703, 1746, 1940, 2233
MmeI TCCRAC 7 cut(s) 183, 468, 759, 825, 1075, 1470, 1522
Mox20I TGGCCA 1 cut(s) 2690
Mph1103I ATGCAT 1 cut(s) 2587
MroI TCCGGA 1 cut(s) 1054
MroXI GAANNNNTTC 4 cut(s) 1062, 1084, 1959, 2539
MscI TGGCCA 1 cut(s) 2690
MseI TTAA 8 cut(s) 441, 809, 1419, 1793, 1797, 1929, 1994, 2145
MslI CAYNNNNRTG 2 cut(s) 223, 1139
Msp20I TGGCCA 1 cut(s) 2690
MspA1I CMGCKG 1 cut(s) 1362
MspCI CTTAAG 1 cut(s) 808
MspI CCGG 3 cut(s) 1055, 1950, 2610
MspR9I CCNGG 3 cut(s) 681, 897, 1951
MunI CAATTG 4 cut(s) 315, 1848, 2168, 2692
Mva1269I GAATGC 2 cut(s) 1372, 2872
MvaI CCWGG 2 cut(s) 681, 897
MvnI CGCG 1 cut(s) 856
MwoI GCNNNNNNNGC 6 cut(s) 15, 1865, 1886, 1901, 2535, 2647
NciI CCSGG 1 cut(s) 1951
NcoI CCATGG 1 cut(s) 2040
NlaIV GGNNCC 5 cut(s) 888, 1165, 1259, 1453, 2305
NmeAIII GCCGAG 1 cut(s) 2521
NmuCI GTSAC 4 cut(s) 1111, 1505, 1523, 2153
NsiI ATGCAT 1 cut(s) 2587
NspV TTCGAA 2 cut(s) 836, 989
PacI TTAATTAA 1 cut(s) 1797
PagI TCATGA 1 cut(s) 2235
PciSI GCTCTTC 2 cut(s) 2325, 2837
PcsI WCGNNNNNNNCGW 1 cut(s) 2187
PctI GAATGC 2 cut(s) 1372, 2872
PdmI GAANNNNTTC 4 cut(s) 1062, 1084, 1959, 2539
PflMI CCANNNNNTGG 2 cut(s) 896, 1126
PkrI GCNGC 6 cut(s) 865, 1193, 1245, 1248, 2177, 2718
PleI GAGTC 8 cut(s) 340, 499, 527, 528, 703, 1745, 1940, 2233
PpsI GAGTC 8 cut(s) 340, 499, 527, 528, 703, 1745, 1940, 2233
PpuMI RGGWCCY 1 cut(s) 1975
PsiI TTATAA 1 cut(s) 939
Psp124BI GAGCTC 2 cut(s) 2076, 2502
Psp5II RGGWCCY 1 cut(s) 1975
Psp6I CCWGG 2 cut(s) 679, 895
PspGI CCWGG 2 cut(s) 679, 895
PspN4I GGNNCC 5 cut(s) 888, 1165, 1259, 1453, 2305
PspPI GGNCC 8 cut(s) 499, 887, 928, 1589, 1975, 2248, 2389, 2420
PspPPI RGGWCCY 1 cut(s) 1975
PsrI GAACNNNNNNTAC 2 cut(s) 1115, 1147
PstNI CAGNNNCTG 2 cut(s) 752, 896
PsuI RGATCY 4 cut(s) 623, 1636, 1957, 2205
PvuII CAGCTG 1 cut(s) 1362
RsaI GTAC 2 cut(s) 2700, 2787
RsaNI GTAC 2 cut(s) 2699, 2786
RseI CAYNNNNRTG 2 cut(s) 223, 1139
SacI GAGCTC 2 cut(s) 2076, 2502
SapI GCTCTTC 2 cut(s) 2325, 2837
SaqAI TTAA 8 cut(s) 441, 809, 1419, 1793, 1797, 1929, 1994, 2145
SatI GCNGC 6 cut(s) 864, 1192, 1244, 1247, 2176, 2717
Sau96I GGNCC 8 cut(s) 499, 887, 928, 1589, 1975, 2248, 2389, 2420
SchI GAGTC 8 cut(s) 341, 500, 527, 529, 703, 1746, 1940, 2233
ScrFI CCNGG 3 cut(s) 681, 897, 1951
SduI GDGCHC 3 cut(s) 2076, 2502, 2531
SfaNI GCATC 5 cut(s) 922, 1527, 2305, 2399, 2847
SfcI CTRYAG 2 cut(s) 2034, 2620
SfuI TTCGAA 2 cut(s) 836, 989
SinI GGWCC 6 cut(s) 499, 887, 928, 1589, 1975, 2420
SmiMI CAYNNNNRTG 2 cut(s) 223, 1139
SmlI CTYRAG 7 cut(s) 329, 808, 946, 1516, 2075, 2462, 2755
SmoI CTYRAG 7 cut(s) 329, 808, 946, 1516, 2075, 2462, 2755
SsiI CCGC 4 cut(s) 700, 856, 1244, 1247
SspMI CTAG 3 cut(s) 1599, 2082, 2435
SstI GAGCTC 2 cut(s) 2076, 2502
StyD4I CCNGG 3 cut(s) 679, 895, 1949
StyI CCWWGG 5 cut(s) 495, 1532, 1815, 1981, 2040
TaqI TCGA 7 cut(s) 237, 836, 956, 989, 2025, 2123, 2190
TaqII GACCGA 1 cut(s) 1606
TatI WGTACW 1 cut(s) 2785
TauI GCSGC 2 cut(s) 1246, 1249
Tru1I TTAA 8 cut(s) 441, 809, 1419, 1793, 1797, 1929, 1994, 2145
Tru9I TTAA 8 cut(s) 441, 809, 1419, 1793, 1797, 1929, 1994, 2145
TscAI CASTG 8 cut(s) 190, 400, 1453, 1624, 2275, 2536, 2551, 2610
TseFI GTSAC 4 cut(s) 1111, 1505, 1523, 2153
TseI GCWGC 4 cut(s) 863, 1191, 2175, 2716
Tsp45I GTSAC 4 cut(s) 1111, 1505, 1523, 2153
TspDTI ATGAA 7 cut(s) 180, 1176, 1439, 1950, 2312, 2393, 2855
TspRI CASTG 8 cut(s) 190, 400, 1453, 1624, 2275, 2536, 2551, 2610
Van91I CCANNNNNTGG 2 cut(s) 896, 1126
Vha464I CTTAAG 1 cut(s) 808
VpaK11BI GGWCC 6 cut(s) 499, 887, 928, 1589, 1975, 2420
XapI RAATTY 9 cut(s) 270, 662, 735, 868, 922, 985, 1629, 1831, 2727
XmiI GTMKAC 1 cut(s) 1131
XmnI GAANNNNTTC 4 cut(s) 1062, 1084, 1959, 2539
XspI CTAG 3 cut(s) 1599, 2082, 2435
Zsp2I ATGCAT 1 cut(s) 2587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.