Rroxscaffold_7G00196610

Leucine-rich repeat receptor-like tyrosine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0008490
Physical Location & Seq
Reverse (-)
39643624 .. 39646903
3280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00196610.1

Sequence Viewer

Length: 2874 bp
ATGTTTGCCTGGCTTAGCTCACAGCTCAGAATGGCAAGGTATGGCCACAACCACCACACCTCTCTTTTCTTCTATTTCTTTTTGTTTTGTTATCCTCTTATTCCTATGGCCTTGTCTGAACTATCCTCAACCCAAAAAGCTACCATGATCAATATCTCCAAGAGTCTAAATAGTAGCAGTGTTTCATGGAACATAAGCAGTGAACCAAACCCATGTCTCTGGAAAGGAGTTAAGTGTAATCCACCCACCGACTCATCTGTAACCCAAATTTCCCTGTCCAAGTTTTCTCTATCTTCCTCAGATTTCCTCCCAATAGTTTGCCAACTTGAGTCTTTGCAGATTCTTGATGTGTCAGAAAACCATCTGACCACAATCCCATCTGGGTTTCTCACAGCTTGTGGAAACATAGATGGGCTCAAGCAACTCAATTTCAGCTATAACAAACTGGTCGGTTCTCTACCTGACTTTGTTGGTTTTGCTGGGTTGGAGTCGTTGGACCTTTCTCGTAATCACTTGAGTGGAGGCATTGGCTCAGAGTTGGATGGATTGGTTGGGCTCAGAAGCTTGAACCTTAGCTTCAACAATTTTACTGGGACTATCCCTACCCAACTTGGGAAATCCATGCTCTTGGAGGAGCTTCAGCTTTCTGTGAATGCATTTCAAGGGAAAATTCCAGTTGAAATTGCGGGCTATCGCAATTTGACTCTGATCGATTTGAGCACAAATCATCTTTCTGGTTTAGTTCCTGAGAATTTTGGAGAGCTATCCAAGTTGAAGGTTCTGATTCTATCTTCCAATAGCTTGACTGGCGAAATCCCAGAAAGCCTTTCCAATATCATAAGCCTCACGCGGTTTGCAGCAAATTCTAACAAGTTCGGGGGAGCAGTTCCTGGTGGAATTACAAAGCATCTAAAAAATTTGGACTTGAGTTATAATAACTTAACTGGGTCGATTCCAGCGGACCTTCTGTCTCCACCGGAATTGACGACTGTGGATTTGTCTAATAACTTGTTGCAGGGATCAATACCCACAGCTGTGTCTCCGGGACTGGTTCGGTTGAGATTGGGAAGCAATTCACTTGCTGGGATGATACCCTCTGCATCACTCCCACTCCAGAACTTGGTGTACTTGGAAATGGAAAACAATAAGCTGAATGGTTCCATACCTCCTGAATTGGGTTCTTGTAGCAATTTGGCGCTGTTGAATTTGGCTCAGAATAGACTGTCTGGGGTTTTACCGGTGCAGTTGGGAAACCTCACTTATCTTCAAGTCTTGAAGCTTCAATCTAACAATCTTGTGGGAGGAATCCCAACTGTGATTACTGGACTAACGAGGTTGTCTGTTCTTAATATCAGCATGAATGCTCTGACTGGTTCAATACCAACAACCATTTCAAAGTTGCAGAACCTTATTAACATGAACTTACAAGGCAACAATCTCAGCGGTTCCATCCCCAACACTATTGGCTCCATGGATTCTCTGTTGGAGCTCCAACTTGGTCACAATTTCTTGAGTGGTGACATTCCAATGATGCCAACATCTTTGCAGATTGCTTTGAATCTCAGCAGCAACCTTTTTGAAGGACCAATTCCTTATCATCTTTCCAGACTCAGTGGATTAGAAATTTTGGATCTATCTAACAACAAATTCTCAGGTCAGATACCCTCATTTTTATCTGAATTGGGAGCATTGACACAGCTGATACTATCTAACAATCAGCTCTCTGGAGTTATTCCATACTTCAAGTCTTGGGTCGTGGTTAACACAAGTGGAAATACGGGTTTGATTAATGTTACCACACCCTCATCGGTAAAGAAAGGAAATTCAAAGGCTTTGATAATTGCACTTGCAGCTGTAGCTGGTGCTGTTGCTACTGTAGCCATCACCATCCTCGCTGTATCACTATCACGGCACAGTTTCAGGGTTAATGATGACCAAGTGGAATCTGGAGAAGATGTTCCTCTTCCTGAGGTCCGCCAAGGTAGTCTCTTAACTGCCAACGCAATTCACAGATCAAGTATCGATTTCAGTACAGCCATGGAGGCAGTTTCTGACCCCGCAAACATTGAGCTCAAGACTAAGTTTTCAACTTACTACAAGGCCACAATGCCGTCTGGATCAAGCTACTTTGTCAAGAAACTCAACTGGAGTGACAAGATATTCCAATTGGGGAGCCATGACAGATTCGAGAACGATTTACAGATCTTTGGAAAACTGAGCAATTCCAATGTCATGACTCCTTTAGCCTATTTTACGACTGTTGACAGTGCTTATCTGTTCTATGAGTTTGCTCCAAAAGGCACCCTCTTTGATGCCCTTCATTGTAGCTCAGACAATGCCATGGATTGGGCAAGTAGATACAGTTCTGCGGTGGGAGTAGCTCAGGGTCTTGCTTTTCTTCATGGATGCACTTCAGGTCCAATACTCCTCCTAGATCTGTCAAGCCGAAGCATTTTGCTCAAGTCCCTCAAAGAGCCTCTTATTGGAGACGCCGAGCTCTGCAAAGTGATTGATCCCTCAAAGAGCACTGGAAGCCTTTCCACTGTTGCTGGTTCTGTTGGTTATATTCCTCCAGAGTATGCATACACTATGAGGGTTACAGTGGCCGGGAACATCTATAGCTTCGGGGTCGTTCTCCTTGAATTGCTGACAGGAAGGCCAGCAGTTAGTGAAGGGATTGAGTTGGCCAATTGGGTACTAAGTAACTCAGGGCAGCAAAATAAAATTCTTGATTTTACTATCAGCAGGACCTCAAGTGCCGTCAGAAGCCAGATGCTAGCTGTACTGAAAGTTGCTCTTGGTTGTGTTAGTGTATCACCAGAAGCAAGGCCAAGAATGAAGAGCGTTCTTAGGATGCTTCTGAATGCAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

957

Amino Acids

102.65

Weight (kDa)

6.72

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 111 - 172 1.1e-07 Leucine rich repeat
LRR_8 PF13855 232 - 291 1.1e-06 Leucine rich repeat
LRR_14 PF23598 389 - 500 6.5e-08 Leucine-rich repeat region
Pkinase PF00069 695 - 951 3.9e-19 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 724 - 952 6.4e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AccB1I GGYRCC 1 cut(s) 2300
AccB7I CCANNNNNTGG 2 cut(s) 1120, 2346
AccII CGCG 1 cut(s) 850
AciI CCGC 7 cut(s) 686, 850, 959, 1443, 1975, 2058, 2369
AclWI GGATC 4 cut(s) 1027, 1638, 2125, 2507
AcoI YGGCCR 3 cut(s) 43, 2604, 2685
AcuI CTGAAG 2 cut(s) 623, 2397
AcyI GRCGYC 1 cut(s) 2490
AfaI GTAC 4 cut(s) 1127, 2032, 2697, 2784
AfiI CCNNNNNNNGG 5 cut(s) 612, 1120, 1175, 2346, 2483
AgeI ACCGGT 1 cut(s) 1237
AhdI GACNNNNNGTC 1 cut(s) 967
AjnI CCWGG 2 cut(s) 8, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 1375, 1407
AleI CACNNNNGTG 2 cut(s) 516, 1034
AloI GAACNNNNNNTCC 2 cut(s) 1941, 1973
Alw21I GWGCWC 5 cut(s) 722, 1491, 2073, 2499, 2528
Alw26I GTCTC 5 cut(s) 221, 975, 1044, 1991, 2481
AlwI GGATC 4 cut(s) 1027, 1638, 2125, 2507
AlwNI CAGNNNCTG 2 cut(s) 890, 2051
AoxI GGCC 7 cut(s) 43, 108, 2100, 2604, 2657, 2685, 2828
ApeKI GCWGC 4 cut(s) 857, 1566, 1850, 2713
ArsI GACNNNNNNTTYG 2 cut(s) 979, 1011
AseI ATTAAT 1 cut(s) 1788
AsiGI ACCGGT 1 cut(s) 1237
Asp700I GAANNNNTTC 3 cut(s) 1072, 1956, 2536
AspLEI GCGC 1 cut(s) 1198
AspS9I GGNCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
AsuC2I CCSGG 2 cut(s) 1044, 2608
AsuHPI GGTGA 3 cut(s) 1529, 1876, 2808
AsuNHI GCTAGC 1 cut(s) 2776
AvaII GGWCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
AxyI CCTNAGG 1 cut(s) 1968
BalI TGGCCA 2 cut(s) 45, 2687
BanI GGYRCC 1 cut(s) 2300
BanII GRGCYC 5 cut(s) 417, 558, 1491, 2073, 2499
Bbv12I GWGCWC 5 cut(s) 722, 1491, 2073, 2499, 2528
BbvI GCAGC 4 cut(s) 869, 1578, 1862, 2725
BccI CCATC 7 cut(s) 369, 385, 404, 536, 1457, 1889, 1895
BceAI ACGGC 3 cut(s) 1925, 2095, 2744
BciT130I CCWGG 2 cut(s) 10, 891
BclI TGATCA 1 cut(s) 147
BcnI CCSGG 2 cut(s) 1044, 2608
BcoDI GTCTC 5 cut(s) 221, 975, 1044, 1991, 2481
BfaI CTAG 2 cut(s) 2432, 2777
BfmI CTRYAG 3 cut(s) 1854, 1875, 2617
BfoI RGCGCY 1 cut(s) 1199
BglI GCCNNNNNGGC 1 cut(s) 2042
BglII AGATCT 2 cut(s) 2202, 2434
BisI GCNGC 4 cut(s) 858, 1567, 1851, 2714
BlpI GCTNAGC 1 cut(s) 14
BlsI GCNGC 4 cut(s) 859, 1568, 1852, 2715
Bme1390I CCNGG 4 cut(s) 10, 891, 1044, 2608
Bme18I GGWCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
BmeRI GACNNNNNGTC 1 cut(s) 967
BmgT120I GGNCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
BmiI GGNNCC 5 cut(s) 1159, 1447, 1468, 2174, 2302
BmrFI CCNGG 4 cut(s) 10, 891, 1044, 2608
BmrI ACTGGG 2 cut(s) 600, 954
BmsI GCATC 7 cut(s) 916, 1109, 1521, 2302, 2396, 2763, 2844
BmtI GCTAGC 1 cut(s) 2780
BmuI ACTGGG 2 cut(s) 600, 954
BpmI CTGGAG 5 cut(s) 1097, 1746, 1968, 2167, 2556
Bpu10I CCTNAGC 2 cut(s) 572, 2382
Bpu1102I GCTNAGC 1 cut(s) 14
BpuEI CTTGAG 8 cut(s) 347, 401, 535, 946, 1531, 2057, 2444, 2737
BpuMI CCSGG 2 cut(s) 1044, 2608
Bsa29I ATCGAT 2 cut(s) 711, 2022
BsaBI GATNNNNATC 1 cut(s) 152
BsaHI GRCGYC 1 cut(s) 2490
BsaJI CCNNGG 4 cut(s) 1470, 1978, 2037, 2340
BsaWI WCCGGW 2 cut(s) 976, 1237
BsaXI ACNNNNNCTCC 4 cut(s) 1095, 1125, 1941, 1971
Bsc4I CCNNNNNNNGG 5 cut(s) 612, 1120, 1175, 2346, 2483
Bse118I RCCGGY 1 cut(s) 1237
Bse21I CCTNAGG 1 cut(s) 1968
Bse8I GATNNNNATC 1 cut(s) 152
BseBI CCWGG 2 cut(s) 10, 891
BseCI ATCGAT 2 cut(s) 711, 2022
BseDI CCNNGG 4 cut(s) 1470, 1978, 2037, 2340
BseGI GGATG 6 cut(s) 547, 1092, 1449, 1887, 2411, 2859
BseJI GATNNNNATC 1 cut(s) 152
BseLI CCNNNNNNNGG 5 cut(s) 612, 1120, 1175, 2346, 2483
BseRI GAGGAG 2 cut(s) 647, 2417
BseXI GCAGC 4 cut(s) 869, 1578, 1862, 2725
BseYI CCCAGC 2 cut(s) 479, 1082
BsgI GTGCAG 1 cut(s) 1262
Bsh1236I CGCG 1 cut(s) 850
BshFI GGCC 7 cut(s) 45, 110, 2102, 2606, 2659, 2687, 2830
BshNI GGYRCC 1 cut(s) 2300
BshTI ACCGGT 1 cut(s) 1237
BshVI ATCGAT 2 cut(s) 711, 2022
BsiHKAI GWGCWC 5 cut(s) 722, 1491, 2073, 2499, 2528
BsiSI CCGG 4 cut(s) 977, 1043, 1238, 2607
BslFI GGGAC 3 cut(s) 607, 1059, 2449
BslI CCNNNNNNNGG 5 cut(s) 612, 1120, 1175, 2346, 2483
BsmAI GTCTC 5 cut(s) 221, 975, 1044, 1991, 2481
BsmBI CGTCTC 1 cut(s) 2481
BsmFI GGGAC 3 cut(s) 607, 1059, 2449
BsmI GAATGC 3 cut(s) 658, 1366, 2869
BsnI GGCC 7 cut(s) 45, 110, 2102, 2606, 2659, 2687, 2830
Bsp1286I GDGCHC 7 cut(s) 417, 558, 722, 1491, 2073, 2499, 2528
Bsp143I GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
Bsp1720I GCTNAGC 1 cut(s) 14
Bsp19I CCATGG 3 cut(s) 1470, 2037, 2340
BspACI CCGC 7 cut(s) 686, 850, 959, 1443, 1975, 2058, 2369
BspANI GGCC 7 cut(s) 45, 110, 2102, 2606, 2659, 2687, 2830
BspDI ATCGAT 2 cut(s) 711, 2022
BspFNI CGCG 1 cut(s) 850
BspHI TCATGA 1 cut(s) 2232
BspLI GGNNCC 5 cut(s) 1159, 1447, 1468, 2174, 2302
BspOI GCTAGC 1 cut(s) 2780
BspPI GGATC 4 cut(s) 1027, 1638, 2125, 2507
BspQI GCTCTTC 1 cut(s) 2834
BspT107I GGYRCC 1 cut(s) 2300
BsrFI RCCGGY 1 cut(s) 1237
BssAI RCCGGY 1 cut(s) 1237
BssECI CCNNGG 4 cut(s) 1470, 1978, 2037, 2340
BssMI GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
BssNI GRCGYC 1 cut(s) 2490
BssT1I CCWWGG 4 cut(s) 1470, 1978, 2037, 2340
Bst2UI CCWGG 2 cut(s) 10, 891
Bst6I CTCTTC 2 cut(s) 1968, 2834
BstACI GRCGYC 1 cut(s) 2490
BstC8I GCNNGC 3 cut(s) 688, 2661, 2778
BstDSI CCRYGG 3 cut(s) 1470, 2037, 2340
BstF5I GGATG 6 cut(s) 547, 1092, 1449, 1887, 2411, 2859
BstFNI CGCG 1 cut(s) 850
BstH2I RGCGCY 1 cut(s) 1199
BstHHI GCGC 1 cut(s) 1198
BstKTI GATC 9 cut(s) 150, 711, 1022, 1633, 2015, 2120, 2205, 2437, 2515
BstMAI GTCTC 5 cut(s) 221, 975, 1044, 1991, 2481
BstMBI GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
BstMWI GCNNNNNNNGC 6 cut(s) 807, 1850, 1856, 1877, 2042, 2532
BstNI CCWGG 2 cut(s) 10, 891
BstSCI CCNGG 4 cut(s) 8, 889, 1042, 2606
BstSFI CTRYAG 3 cut(s) 1854, 1875, 2617
BstUI CGCG 1 cut(s) 850
BstV1I GCAGC 4 cut(s) 869, 1578, 1862, 2725
BstX2I RGATCY 3 cut(s) 1630, 2202, 2434
BstXI CCANNNNNNTGG 2 cut(s) 219, 628
BstYI RGATCY 3 cut(s) 1630, 2202, 2434
Bsu15I ATCGAT 2 cut(s) 711, 2022
Bsu36I CCTNAGG 1 cut(s) 1968
BsuRI GGCC 7 cut(s) 45, 110, 2102, 2606, 2659, 2687, 2830
BsuTUI ATCGAT 2 cut(s) 711, 2022
BtgI CCRYGG 3 cut(s) 1470, 2037, 2340
BtsCI GGATG 6 cut(s) 547, 1092, 1449, 1887, 2411, 2859
BtsI GCAGTG 2 cut(s) 184, 205
BtsIMutI CAGTG 7 cut(s) 184, 205, 1618, 2272, 2526, 2541, 2607
Cac8I GCNNGC 3 cut(s) 688, 2661, 2778
CaiI CAGNNNCTG 2 cut(s) 890, 2051
CciI TCATGA 1 cut(s) 2232
CfoI GCGC 1 cut(s) 1198
Cfr10I RCCGGY 1 cut(s) 1237
Cfr13I GGNCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
ClaI ATCGAT 2 cut(s) 711, 2022
CseI GACGC 1 cut(s) 2498
Csp6I GTAC 4 cut(s) 1126, 2031, 2696, 2783
CspAI ACCGGT 1 cut(s) 1237
CspCI CAANNNNNGTGG 2 cut(s) 963, 998
CviQI GTAC 4 cut(s) 1126, 2031, 2696, 2783
DpnI GATC 9 cut(s) 149, 710, 1021, 1632, 2014, 2119, 2204, 2436, 2514
DpnII GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
DriI GACNNNNNGTC 1 cut(s) 967
EaeI YGGCCR 3 cut(s) 43, 2604, 2685
Eam1104I CTCTTC 2 cut(s) 1968, 2834
Eam1105I GACNNNNNGTC 1 cut(s) 967
EarI CTCTTC 2 cut(s) 1968, 2834
EciI GGCGGA 1 cut(s) 1964
Ecl136II GAGCTC 3 cut(s) 1489, 2071, 2497
Eco130I CCWWGG 4 cut(s) 1470, 1978, 2037, 2340
Eco24I GRGCYC 5 cut(s) 417, 558, 1491, 2073, 2499
Eco47I GGWCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
Eco53kI GAGCTC 3 cut(s) 1489, 2071, 2497
Eco57I CTGAAG 2 cut(s) 623, 2397
Eco81I CCTNAGG 1 cut(s) 1968
EcoICRI GAGCTC 3 cut(s) 1489, 2071, 2497
EcoO109I RGGNCCY 1 cut(s) 2748
EcoRII CCWGG 2 cut(s) 8, 889
EcoT14I CCWWGG 4 cut(s) 1470, 1978, 2037, 2340
EcoT22I ATGCAT 2 cut(s) 658, 2584
EcoT38I GRGCYC 5 cut(s) 417, 558, 1491, 2073, 2499
ErhI CCWWGG 4 cut(s) 1470, 1978, 2037, 2340
Esp3I CGTCTC 1 cut(s) 2481
FalI AAGNNNNNCTT 4 cut(s) 2463, 2495, 2781, 2813
FaqI GGGAC 3 cut(s) 607, 1059, 2449
FauI CCCGC 2 cut(s) 679, 2065
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 4 cut(s) 858, 1567, 1851, 2714
FokI GGATG 6 cut(s) 554, 1099, 1436, 1874, 2418, 2866
FriOI GRGCYC 5 cut(s) 417, 558, 1491, 2073, 2499
Fsp4HI GCNGC 4 cut(s) 858, 1567, 1851, 2714
FspBI CTAG 2 cut(s) 2432, 2777
GlaI GCGC 1 cut(s) 1197
GluI GCNGC 4 cut(s) 858, 1567, 1851, 2714
GsaI CCCAGC 2 cut(s) 483, 1086
GsuI CTGGAG 5 cut(s) 1097, 1746, 1968, 2167, 2556
HaeII RGCGCY 1 cut(s) 1199
HaeIII GGCC 7 cut(s) 45, 110, 2102, 2606, 2659, 2687, 2830
HapII CCGG 4 cut(s) 977, 1043, 1238, 2607
HgaI GACGC 1 cut(s) 2498
HhaI GCGC 1 cut(s) 1198
Hin1I GRCGYC 1 cut(s) 2490
Hin6I GCGC 1 cut(s) 1196
HinP1I GCGC 1 cut(s) 1196
HincII GTYRAC 2 cut(s) 1762, 2263
HindII GTYRAC 2 cut(s) 1762, 2263
HindIII AAGCTT 2 cut(s) 562, 1277
HpaI GTTAAC 1 cut(s) 1762
HpaII CCGG 4 cut(s) 977, 1043, 1238, 2607
HphI GGTGA 3 cut(s) 1529, 1876, 2808
Hpy166II GTNNAC 4 cut(s) 203, 1126, 1762, 2263
Hpy8I GTNNAC 4 cut(s) 203, 1126, 1762, 2263
HpyAV CCTTC 6 cut(s) 769, 974, 1574, 2327, 2649, 2666
HpyF10VI GCNNNNNNNGC 6 cut(s) 807, 1850, 1856, 1877, 2042, 2532
Hsp92I GRCGYC 1 cut(s) 2490
HspAI GCGC 1 cut(s) 1196
Ksp22I TGATCA 1 cut(s) 147
KspAI GTTAAC 1 cut(s) 1762
Kzo9I GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
LguI GCTCTTC 1 cut(s) 2834
LmnI GCTCC 8 cut(s) 634, 881, 1472, 1486, 1494, 1685, 2172, 2296
Lsp1109I GCAGC 4 cut(s) 869, 1578, 1862, 2725
LweI GCATC 7 cut(s) 916, 1109, 1521, 2302, 2396, 2763, 2844
MaeI CTAG 2 cut(s) 2432, 2777
MaeIII GTNAC 7 cut(s) 259, 1499, 1517, 1792, 2150, 2596, 2702
MalI GATC 9 cut(s) 149, 710, 1021, 1632, 2014, 2119, 2204, 2436, 2514
MboI GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
MboII GAAGA 8 cut(s) 61, 285, 783, 1256, 1955, 1964, 2390, 2851
MfeI CAATTG 2 cut(s) 2165, 2689
MflI RGATCY 3 cut(s) 1630, 2202, 2434
MhlI GDGCHC 7 cut(s) 417, 558, 722, 1491, 2073, 2499, 2528
MlsI TGGCCA 2 cut(s) 45, 2687
MluNI TGGCCA 2 cut(s) 45, 2687
MlyI GAGTC 7 cut(s) 172, 245, 338, 497, 697, 1602, 2230
MmeI TCCRAC 5 cut(s) 465, 474, 519, 1464, 1516
Mox20I TGGCCA 2 cut(s) 45, 2687
Mph1103I ATGCAT 2 cut(s) 658, 2584
MroXI GAANNNNTTC 3 cut(s) 1072, 1956, 2536
MscI TGGCCA 2 cut(s) 45, 2687
MseI TTAA 8 cut(s) 231, 941, 1347, 1413, 1761, 1788, 1926, 1991
MslI CAYNNNNRTG 3 cut(s) 516, 1034, 1526
Msp20I TGGCCA 2 cut(s) 45, 2687
MspA1I CMGCKG 5 cut(s) 959, 1034, 1443, 1699, 1853
MspI CCGG 4 cut(s) 977, 1043, 1238, 2607
MspR9I CCNGG 4 cut(s) 10, 891, 1044, 2608
MunI CAATTG 2 cut(s) 2165, 2689
Mva1269I GAATGC 3 cut(s) 658, 1366, 2869
MvaI CCWGG 2 cut(s) 10, 891
MvnI CGCG 1 cut(s) 850
MwoI GCNNNNNNNGC 6 cut(s) 807, 1850, 1856, 1877, 2042, 2532
NciI CCSGG 2 cut(s) 1044, 2608
NcoI CCATGG 3 cut(s) 1470, 2037, 2340
NdeII GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
NheI GCTAGC 1 cut(s) 2776
NlaIV GGNNCC 5 cut(s) 1159, 1447, 1468, 2174, 2302
NmeAIII GCCGAG 1 cut(s) 2518
NmuCI GTSAC 3 cut(s) 1499, 1517, 2150
NsiI ATGCAT 2 cut(s) 658, 2584
OliI CACNNNNGTG 2 cut(s) 516, 1034
PagI TCATGA 1 cut(s) 2232
PciSI GCTCTTC 1 cut(s) 2834
PctI GAATGC 3 cut(s) 658, 1366, 2869
PdmI GAANNNNTTC 3 cut(s) 1072, 1956, 2536
PfeI GAWTC 8 cut(s) 340, 784, 952, 1305, 1475, 1558, 1943, 2184
PflMI CCANNNNNTGG 2 cut(s) 1120, 2346
PfoI TCCNGGA 1 cut(s) 1042
PinAI ACCGGT 1 cut(s) 1237
PkrI GCNGC 4 cut(s) 859, 1568, 1852, 2715
PleI GAGTC 7 cut(s) 171, 245, 337, 496, 697, 1602, 2230
PpsI GAGTC 7 cut(s) 171, 245, 337, 496, 697, 1602, 2230
PpuMI RGGWCCY 1 cut(s) 2748
PshBI ATTAAT 1 cut(s) 1788
PsiI TTATAA 1 cut(s) 933
Psp124BI GAGCTC 3 cut(s) 1491, 2073, 2499
Psp5II RGGWCCY 1 cut(s) 2748
Psp6I CCWGG 2 cut(s) 8, 889
PspFI CCCAGC 2 cut(s) 479, 1082
PspGI CCWGG 2 cut(s) 8, 889
PspN4I GGNNCC 5 cut(s) 1159, 1447, 1468, 2174, 2302
PspPI GGNCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
PspPPI RGGWCCY 1 cut(s) 2748
PsrI GAACNNNNNNTAC 4 cut(s) 1109, 1141, 2347, 2379
PstNI CAGNNNCTG 2 cut(s) 890, 2051
PsuI RGATCY 3 cut(s) 1630, 2202, 2434
PvuII CAGCTG 3 cut(s) 1034, 1699, 1853
RsaI GTAC 4 cut(s) 1127, 2032, 2697, 2784
RsaNI GTAC 4 cut(s) 1126, 2031, 2696, 2783
RseI CAYNNNNRTG 3 cut(s) 516, 1034, 1526
SacI GAGCTC 3 cut(s) 1491, 2073, 2499
SapI GCTCTTC 1 cut(s) 2834
SaqAI TTAA 8 cut(s) 231, 941, 1347, 1413, 1761, 1788, 1926, 1991
SatI GCNGC 4 cut(s) 858, 1567, 1851, 2714
Sau3AI GATC 9 cut(s) 147, 708, 1019, 1630, 2012, 2117, 2202, 2434, 2512
Sau96I GGNCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
SchI GAGTC 7 cut(s) 172, 245, 338, 497, 697, 1602, 2230
ScrFI CCNGG 4 cut(s) 10, 891, 1044, 2608
SduI GDGCHC 7 cut(s) 417, 558, 722, 1491, 2073, 2499, 2528
SfaNI GCATC 7 cut(s) 916, 1109, 1521, 2302, 2396, 2763, 2844
SfcI CTRYAG 3 cut(s) 1854, 1875, 2617
SinI GGWCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
SmiMI CAYNNNNRTG 3 cut(s) 516, 1034, 1526
SmlI CTYRAG 8 cut(s) 326, 416, 514, 925, 1510, 2072, 2459, 2752
SmoI CTYRAG 8 cut(s) 326, 416, 514, 925, 1510, 2072, 2459, 2752
SsiI CCGC 7 cut(s) 686, 850, 959, 1443, 1975, 2058, 2369
SspMI CTAG 2 cut(s) 2432, 2777
SstI GAGCTC 3 cut(s) 1491, 2073, 2499
StyD4I CCNGG 4 cut(s) 8, 889, 1042, 2606
StyI CCWWGG 4 cut(s) 1470, 1978, 2037, 2340
TaqI TCGA 4 cut(s) 711, 950, 2022, 2187
TatI WGTACW 3 cut(s) 1125, 2030, 2782
TfiI GAWTC 8 cut(s) 340, 784, 952, 1305, 1475, 1558, 1943, 2184
Tru1I TTAA 8 cut(s) 231, 941, 1347, 1413, 1761, 1788, 1926, 1991
Tru9I TTAA 8 cut(s) 231, 941, 1347, 1413, 1761, 1788, 1926, 1991
TscAI CASTG 7 cut(s) 184, 205, 1618, 2272, 2533, 2548, 2607
TseFI GTSAC 3 cut(s) 1499, 1517, 2150
TseI GCWGC 4 cut(s) 857, 1566, 1850, 2713
Tsp45I GTSAC 3 cut(s) 1499, 1517, 2150
TspDTI ATGAA 6 cut(s) 174, 1373, 1433, 2309, 2390, 2852
TspRI CASTG 7 cut(s) 184, 205, 1618, 2272, 2533, 2548, 2607
Van91I CCANNNNNTGG 2 cut(s) 1120, 2346
VpaK11BI GGWCC 6 cut(s) 496, 961, 1583, 1972, 2417, 2748
VspI ATTAAT 1 cut(s) 1788
XcmI CCANNNNNNNNNTGG 1 cut(s) 1943
XmnI GAANNNNTTC 3 cut(s) 1072, 1956, 2536
XspI CTAG 2 cut(s) 2432, 2777
Zsp2I ATGCAT 2 cut(s) 658, 2584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.