RchiOBHm_Chr6g0272091

Leucine-rich repeat receptor-like tyrosine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0008490
Physical Location & Seq
Forward (+)
32164550 .. 32168019
3470 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24408

Sequence Viewer

Length: 2778 bp
ATGTTTGCCTGGCTTAGCTCACAGCTCAGAATGGCAAGGTATGGCCACAACCACCGCACCTCTCTTTTCTTCTATTTCTTTTTGTTTTGTTATCCTCTTATTCCTATGGCCTTGTCTGAACTATCCTCAACCCAAAATACTACCATGATCAATATCTCCAAGAGTCTAAATAGTAGCAGTGTTTCATGGAACATACACAGTGAACCAAACCCATGTCTCTGGAAAGGAGTTAAGTGTAAGCCACCCACCAACTCGTCTGTAACCCAACTTTCCCTGTCCAAGTTTTCTCTATCTTCCTCAGATTTCCTCCCAATTGTTTGCCAACTTGAGTCTTTGGAGATTCTTGATGTGTCAGTAAACCATCTAACCACAATCCCACCTAAGTTTCTCACAGCTTGTGGAAACATAGATGGGCTAAAGCAACTCAATTTCAGCTTTAACAATCTGGGCGGTTCTTTACCTGACTTTGTTGGTTTTGCTGGGTTGGAGTCGTTGGACCTTTCTCGTAATCACTTGAGTGGAGGCATTGGCTCAGAGTTGGATGGATTGGTAAGGCTCAGAATCTTCAACATCAGCTTCAACCGTTTTAGTGGGACTATCCCTACCCTACTTGGGAAGTCCATGGTCTTGGAGGAGCTTCAGCTTTCTGTCAATACATTTCAAGGGATAATCCCAGTTAAAATTGCGGACTATCGCAATTTGACTCTGATTGATTTGAGCACAAATTATCTTTCTGGTTCAGTTCCTGAGAATTTTGGAGAGCTATCCAAGTTGAAGGTTCTGATTCTATCTTCCAATAACTTAACTGGCAAAATCCCAGACAGCCTTTCCAATATCACAAGCCTTACGCGGTTTGCAGCAAATTTAAACAACTTCGGTGGTGCAGTTCCTGTTGGAATTACAAAACATCTCAAGAATTTGGACTTGAGTTATAATCGCTTAAGTGGGTCGATTCCATCGGACCTTCTGTCTCCATTGGATTTGACGACTGTGGATTTGTCTAATAACTTGTTGCAGGGATCAATACCCACAGCTCTGTCTCAGGGACTGCTGAATGGTTCCATACCTCCTGAATTGGGTTCTTGCAGCAATTTGACGCTGTTGAATTTGGCTGAGAATAGACTGTCTGGAGCTTTGCCGGTGGAGTTGGGAAACCTCAGTAATCTTCAAGTCTTGAAGCTTCAATCTAACAGTCTTTCTGGAGTAATCCCAACTGAGATTACTGAACTAGCGAAGTTGTCTGTTCTGAATATCAGCGGGAATGCTCTGACTGGTTCAATACCAACAACCATTTCAAACTTGCAGAGCCTTATTAACATGAACTTAGAAGGCAACAATCTCACGGGTTCCATTCCCAACACTATTGCCTCCATGGATTCTCTGTTGGAGCTCCAACTTGGTCACAATTCCTTGAGTGGTGACATTCCTATGATGCCAATATCTTTGCAGATTGCTTTGAATCTCAGCAGCAACCTTTTTGAAGGACCAATTCCTAATCATCTTTCCAGACTCAGTGGATTAGAAATTTTGGATCTATCTAACAACAAGTTCTCAGGTGAGATACCCTCATTTTTATCTAATCAAATGGAAGCATTGACACAGTTGATACTATCTAACAATCAGCTCACTGGAGTTATTCCACACTTCAATTCTTGGGTCTTGGTCAACACTACTGGAAATAAGGATTTGATTAATGATACCACAACCTCATCGGTAAAGAAAGGAAATTCAAAGGCTTTGATAATTGCACTTGCAGCTGTAGCCGGTGCTGTTGCTATTGTAGCCATCACCATCCTTGCTGTATCACTATCACGGCACAGTTACAGGGTTAATGATGACCAAGTGGAGTCTGGAGAAGATGTTCCTCTTCCTGAGGTCCGCCAAGGTAGTCTCTTAACTGCCAACGCAATTCACAGATCAAGTATCGATTTCAGTACAGCCATGGAGGCAGTTTCAGACCCCGCAAACATTGAGCTCAAGACTAAGTTTTCAACTTACTACAAGGCCACAATGCCGTCTGGATCAAGCTACTTTGTCAAGAAACTCAACTGGAGTGACAAGATATTCCAATTGGGGAGCCATGACAGATTCGAGAACGATTTACAGATCTTTGGAAAACTGAGCAATTCCAATGTCATGACTCCTTTGGCCTATTTTACGACTGTTGACAGTGCTTATCTGTTCTATGAGTTTGCTCCAAAAGGCACCCTCTTTGATGCCCTTCATTGTAGCTCAGACAATGCCATGGATTGGGCAAGTAGATACAGTTCTGCGGTTGGAGTAGCTCAGGGTCTTGCTTTTCTTCATGGATGCACTTCAGGTCCAATACTCCTCCTAGACCTGTCAAGCCGAAGCATTTTGCTCAAGTCCCACAAAGAGCCTCTTATTGGAGACGCCGAGCTCTGCAAAGTGATTGATCCCTCAAAGAGCACTGGAAGCCTTTCCACTGTTGCTGGTTCTGTTGGTTATATTCCTCCAGAGTATGCATACACTATGAGGGTTACAGTAGCCGGGAACATCTATAGCTTCGGGGTCATTCTCCTTGAATTGCTGACAGGAAGGCCAGCAGTTAGTGAAGGGATTGAGTTGGCCAATTGGGTACTAAGTAACTCAGGGCAGCAAGATAAAATTCTTGATTTGACGATCAGCAGGACATCAAGTGCTGTCAGAAGCCAGATGCTAGCTGTACTGAAAGTTGCTCTTGGTTGTGTTAGTGTGTCACCAGAAGCAAGGCCAAGAATGAAGAGCGTTCTTAGGATGCTTCTGAATGCAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

925

Amino Acids

99.64

Weight (kDa)

6.14

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 111 - 172 2.5e-06 Leucine rich repeat
LRR_8 PF13855 232 - 285 3.8e-06 Leucine rich repeat
LRR_14 PF23598 357 - 468 9.3e-10 Leucine-rich repeat region
LRR_8 PF13855 363 - 423 5.9e-08 Leucine rich repeat
Pkinase PF00069 663 - 919 3.9e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 692 - 920 3.2e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AccB1I GGYRCC 1 cut(s) 2204
AccB7I CCANNNNNTGG 1 cut(s) 2250
AccII CGCG 1 cut(s) 850
AciI CCGC 8 cut(s) 55, 450, 686, 850, 1257, 1879, 1962, 2273
AclWI GGATC 4 cut(s) 1027, 1539, 2029, 2411
AcoI YGGCCR 2 cut(s) 43, 2589
AcsI RAATTY 7 cut(s) 751, 862, 916, 1105, 1524, 1726, 2628
AcuI CTGAAG 2 cut(s) 623, 2301
AcyI GRCGYC 1 cut(s) 2394
AfaI GTAC 3 cut(s) 1936, 2601, 2688
AfiI CCNNNNNNNGG 4 cut(s) 612, 1076, 2250, 2387
AflII CTTAAG 1 cut(s) 940
AhdI GACNNNNNGTC 1 cut(s) 967
AjnI CCWGG 1 cut(s) 8
AjuI GAANNNNNNNTTGG 2 cut(s) 1276, 1308
AleI CACNNNNGTG 1 cut(s) 516
AloI GAACNNNNNNTCC 2 cut(s) 1845, 1877
Alw21I GWGCWC 5 cut(s) 722, 1392, 1977, 2403, 2432
Alw26I GTCTC 5 cut(s) 221, 975, 1044, 1895, 2385
AlwI GGATC 4 cut(s) 1027, 1539, 2029, 2411
AlwNI CAGNNNCTG 3 cut(s) 746, 890, 1048
AoxI GGCC 7 cut(s) 43, 108, 2004, 2148, 2561, 2589, 2732
ApeKI GCWGC 5 cut(s) 857, 1086, 1467, 1754, 2617
ApoI RAATTY 7 cut(s) 751, 862, 916, 1105, 1524, 1726, 2628
ArsI GACNNNNNNTTYG 2 cut(s) 979, 1011
AseI ATTAAT 1 cut(s) 1692
Asp700I GAANNNNTTC 2 cut(s) 1860, 2440
AspS9I GGNCC 5 cut(s) 496, 961, 1484, 1876, 2321
AsuC2I CCSGG 1 cut(s) 2512
AsuHPI GGTGA 4 cut(s) 1430, 1568, 1780, 2712
AsuNHI GCTAGC 1 cut(s) 2680
AvaII GGWCC 5 cut(s) 496, 961, 1484, 1876, 2321
AxyI CCTNAGG 1 cut(s) 1872
BalI TGGCCA 2 cut(s) 45, 2591
BanI GGYRCC 1 cut(s) 2204
BanII GRGCYC 3 cut(s) 1392, 1977, 2403
Bbv12I GWGCWC 5 cut(s) 722, 1392, 1977, 2403, 2432
BbvI GCAGC 5 cut(s) 869, 1098, 1479, 1766, 2629
BccI CCATC 6 cut(s) 369, 404, 536, 964, 1793, 1799
BceAI ACGGC 2 cut(s) 1829, 1999
BciT130I CCWGG 1 cut(s) 10
BclI TGATCA 1 cut(s) 147
BcnI CCSGG 1 cut(s) 2512
BcoDI GTCTC 5 cut(s) 221, 975, 1044, 1895, 2385
BfaI CTAG 3 cut(s) 1229, 2336, 2681
BfmI CTRYAG 2 cut(s) 1758, 2521
BfrI CTTAAG 1 cut(s) 940
BglI GCCNNNNNGGC 1 cut(s) 1946
BglII AGATCT 1 cut(s) 2106
BisI GCNGC 5 cut(s) 858, 1087, 1468, 1755, 2618
BlpI GCTNAGC 1 cut(s) 14
BlsI GCNGC 5 cut(s) 859, 1088, 1469, 1756, 2619
Bme1390I CCNGG 2 cut(s) 10, 2512
Bme18I GGWCC 5 cut(s) 496, 961, 1484, 1876, 2321
BmeRI GACNNNNNGTC 1 cut(s) 967
BmgT120I GGNCC 5 cut(s) 496, 961, 1484, 1876, 2321
BmiI GGNNCC 4 cut(s) 1060, 1348, 2078, 2206
BmrFI CCNGG 2 cut(s) 10, 2512
BmrI ACTGGG 1 cut(s) 668
BmsI GCATC 5 cut(s) 1422, 2206, 2300, 2667, 2748
BmtI GCTAGC 1 cut(s) 2684
BmuI ACTGGG 1 cut(s) 668
BplI GAGNNNNNCTC 2 cut(s) 1550, 1582
BpmI CTGGAG 6 cut(s) 1149, 1221, 1650, 1872, 2071, 2460
Bpu10I CCTNAGC 1 cut(s) 2286
Bpu1102I GCTNAGC 1 cut(s) 14
BpuEI CTTGAG 7 cut(s) 347, 535, 896, 946, 1432, 1961, 2348
BpuMI CCSGG 1 cut(s) 2512
Bsa29I ATCGAT 1 cut(s) 1926
BsaBI GATNNNNATC 1 cut(s) 152
BsaHI GRCGYC 1 cut(s) 2394
BsaJI CCNNGG 5 cut(s) 621, 1371, 1882, 1941, 2244
BsaXI ACNNNNNCTCC 2 cut(s) 1845, 1875
Bsc4I CCNNNNNNNGG 4 cut(s) 612, 1076, 2250, 2387
Bse118I RCCGGY 2 cut(s) 1138, 1763
Bse1I ACTGG 7 cut(s) 674, 811, 1276, 1633, 1678, 2054, 2437
Bse21I CCTNAGG 1 cut(s) 1872
Bse8I GATNNNNATC 1 cut(s) 152
BseBI CCWGG 1 cut(s) 10
BseCI ATCGAT 1 cut(s) 1926
BseDI CCNNGG 5 cut(s) 621, 1371, 1882, 1941, 2244
BseGI GGATG 4 cut(s) 547, 1791, 2315, 2763
BseJI GATNNNNATC 1 cut(s) 152
BseLI CCNNNNNNNGG 4 cut(s) 612, 1076, 2250, 2387
BseNI ACTGG 7 cut(s) 674, 811, 1276, 1633, 1678, 2054, 2437
BseRI GAGGAG 2 cut(s) 647, 2321
BseXI GCAGC 5 cut(s) 869, 1098, 1479, 1766, 2629
BseYI CCCAGC 1 cut(s) 479
BsgI GTGCAG 1 cut(s) 903
Bsh1236I CGCG 1 cut(s) 850
BshFI GGCC 7 cut(s) 45, 110, 2006, 2150, 2563, 2591, 2734
BshNI GGYRCC 1 cut(s) 2204
BshVI ATCGAT 1 cut(s) 1926
BsiHKAI GWGCWC 5 cut(s) 722, 1392, 1977, 2403, 2432
BsiSI CCGG 3 cut(s) 1139, 1764, 2511
BslFI GGGAC 3 cut(s) 607, 1059, 2353
BslI CCNNNNNNNGG 4 cut(s) 612, 1076, 2250, 2387
BsmAI GTCTC 5 cut(s) 221, 975, 1044, 1895, 2385
BsmBI CGTCTC 1 cut(s) 2385
BsmFI GGGAC 3 cut(s) 607, 1059, 2353
BsmI GAATGC 2 cut(s) 1267, 2773
BsnI GGCC 7 cut(s) 45, 110, 2006, 2150, 2563, 2591, 2734
Bsp1286I GDGCHC 5 cut(s) 722, 1392, 1977, 2403, 2432
Bsp143I GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
Bsp1720I GCTNAGC 1 cut(s) 14
Bsp19I CCATGG 4 cut(s) 621, 1371, 1941, 2244
BspACI CCGC 8 cut(s) 55, 450, 686, 850, 1257, 1879, 1962, 2273
BspANI GGCC 7 cut(s) 45, 110, 2006, 2150, 2563, 2591, 2734
BspDI ATCGAT 1 cut(s) 1926
BspFNI CGCG 1 cut(s) 850
BspHI TCATGA 1 cut(s) 2136
BspLI GGNNCC 4 cut(s) 1060, 1348, 2078, 2206
BspOI GCTAGC 1 cut(s) 2684
BspPI GGATC 4 cut(s) 1027, 1539, 2029, 2411
BspQI GCTCTTC 1 cut(s) 2738
BspT107I GGYRCC 1 cut(s) 2204
BspTI CTTAAG 1 cut(s) 940
BsrFI RCCGGY 2 cut(s) 1138, 1763
BsrI ACTGG 7 cut(s) 674, 811, 1276, 1633, 1678, 2054, 2437
BssAI RCCGGY 2 cut(s) 1138, 1763
BssECI CCNNGG 5 cut(s) 621, 1371, 1882, 1941, 2244
BssMI GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
BssNI GRCGYC 1 cut(s) 2394
BssT1I CCWWGG 5 cut(s) 621, 1371, 1882, 1941, 2244
Bst2UI CCWGG 1 cut(s) 10
Bst6I CTCTTC 2 cut(s) 1872, 2738
BstACI GRCGYC 1 cut(s) 2394
BstAFI CTTAAG 1 cut(s) 940
BstC8I GCNNGC 2 cut(s) 2565, 2682
BstDSI CCRYGG 4 cut(s) 621, 1371, 1941, 2244
BstF5I GGATG 4 cut(s) 547, 1791, 2315, 2763
BstFNI CGCG 1 cut(s) 850
BstKTI GATC 8 cut(s) 150, 1022, 1534, 1919, 2024, 2109, 2419, 2646
BstMAI GTCTC 5 cut(s) 221, 975, 1044, 1895, 2385
BstMBI GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
BstMWI GCNNNNNNNGC 5 cut(s) 1754, 1760, 1781, 1946, 2436
BstNI CCWGG 1 cut(s) 10
BstSCI CCNGG 2 cut(s) 8, 2510
BstSFI CTRYAG 2 cut(s) 1758, 2521
BstUI CGCG 1 cut(s) 850
BstV1I GCAGC 5 cut(s) 869, 1098, 1479, 1766, 2629
BstX2I RGATCY 2 cut(s) 1531, 2106
BstXI CCANNNNNNTGG 2 cut(s) 219, 628
BstYI RGATCY 2 cut(s) 1531, 2106
Bsu15I ATCGAT 1 cut(s) 1926
Bsu36I CCTNAGG 1 cut(s) 1872
BsuRI GGCC 7 cut(s) 45, 110, 2006, 2150, 2563, 2591, 2734
BsuTUI ATCGAT 1 cut(s) 1926
BtgI CCRYGG 4 cut(s) 621, 1371, 1941, 2244
BtsCI GGATG 4 cut(s) 547, 1791, 2315, 2763
BtsI GCAGTG 1 cut(s) 184
BtsIMutI CAGTG 7 cut(s) 184, 205, 1519, 1626, 2176, 2430, 2445
Cac8I GCNNGC 2 cut(s) 2565, 2682
CaiI CAGNNNCTG 3 cut(s) 746, 890, 1048
CciI TCATGA 1 cut(s) 2136
Cfr10I RCCGGY 2 cut(s) 1138, 1763
Cfr13I GGNCC 5 cut(s) 496, 961, 1484, 1876, 2321
ClaI ATCGAT 1 cut(s) 1926
CseI GACGC 2 cut(s) 1105, 2402
Csp6I GTAC 3 cut(s) 1935, 2600, 2687
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviQI GTAC 3 cut(s) 1935, 2600, 2687
DpnI GATC 8 cut(s) 149, 1021, 1533, 1918, 2023, 2108, 2418, 2645
DpnII GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
DraI TTTAAA 1 cut(s) 867
DriI GACNNNNNGTC 1 cut(s) 967
EaeI YGGCCR 2 cut(s) 43, 2589
Eam1104I CTCTTC 2 cut(s) 1872, 2738
Eam1105I GACNNNNNGTC 1 cut(s) 967
EarI CTCTTC 2 cut(s) 1872, 2738
EciI GGCGGA 1 cut(s) 1868
Ecl136II GAGCTC 3 cut(s) 1390, 1975, 2401
Eco130I CCWWGG 5 cut(s) 621, 1371, 1882, 1941, 2244
Eco24I GRGCYC 3 cut(s) 1392, 1977, 2403
Eco47I GGWCC 5 cut(s) 496, 961, 1484, 1876, 2321
Eco53kI GAGCTC 3 cut(s) 1390, 1975, 2401
Eco57I CTGAAG 2 cut(s) 623, 2301
Eco81I CCTNAGG 1 cut(s) 1872
EcoICRI GAGCTC 3 cut(s) 1390, 1975, 2401
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 5 cut(s) 621, 1371, 1882, 1941, 2244
EcoT22I ATGCAT 1 cut(s) 2488
EcoT38I GRGCYC 3 cut(s) 1392, 1977, 2403
ErhI CCWWGG 5 cut(s) 621, 1371, 1882, 1941, 2244
Esp3I CGTCTC 1 cut(s) 2385
FalI AAGNNNNNCTT 4 cut(s) 2367, 2399, 2685, 2717
FaqI GGGAC 3 cut(s) 607, 1059, 2353
FauI CCCGC 2 cut(s) 1250, 1969
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 5 cut(s) 858, 1087, 1468, 1755, 2618
FokI GGATG 4 cut(s) 554, 1778, 2322, 2770
FriOI GRGCYC 3 cut(s) 1392, 1977, 2403
Fsp4HI GCNGC 5 cut(s) 858, 1087, 1468, 1755, 2618
FspBI CTAG 3 cut(s) 1229, 2336, 2681
GluI GCNGC 5 cut(s) 858, 1087, 1468, 1755, 2618
GsaI CCCAGC 1 cut(s) 483
GsuI CTGGAG 6 cut(s) 1149, 1221, 1650, 1872, 2071, 2460
HaeIII GGCC 7 cut(s) 45, 110, 2006, 2150, 2563, 2591, 2734
HapII CCGG 3 cut(s) 1139, 1764, 2511
HgaI GACGC 2 cut(s) 1105, 2402
Hin1I GRCGYC 1 cut(s) 2394
HincII GTYRAC 2 cut(s) 1666, 2167
HindII GTYRAC 2 cut(s) 1666, 2167
HindIII AAGCTT 1 cut(s) 1178
HpaII CCGG 3 cut(s) 1139, 1764, 2511
HphI GGTGA 4 cut(s) 1430, 1568, 1780, 2712
Hpy166II GTNNAC 4 cut(s) 203, 358, 1666, 2167
Hpy8I GTNNAC 4 cut(s) 203, 358, 1666, 2167
HpyAV CCTTC 7 cut(s) 769, 974, 1322, 1475, 2231, 2553, 2570
HpyF10VI GCNNNNNNNGC 5 cut(s) 1754, 1760, 1781, 1946, 2436
Hsp92I GRCGYC 1 cut(s) 2394
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
LguI GCTCTTC 1 cut(s) 2738
LmnI GCTCC 6 cut(s) 634, 1130, 1387, 1395, 2076, 2200
Lsp1109I GCAGC 5 cut(s) 869, 1098, 1479, 1766, 2629
LweI GCATC 5 cut(s) 1422, 2206, 2300, 2667, 2748
MaeI CTAG 3 cut(s) 1229, 2336, 2681
MaeIII GTNAC 8 cut(s) 259, 1400, 1418, 1820, 2054, 2500, 2606, 2718
MalI GATC 8 cut(s) 149, 1021, 1533, 1918, 2023, 2108, 2418, 2645
MboI GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
MboII GAAGA 9 cut(s) 61, 285, 556, 783, 1157, 1859, 1868, 2294, 2755
MfeI CAATTG 3 cut(s) 312, 2069, 2593
MflI RGATCY 2 cut(s) 1531, 2106
MhlI GDGCHC 5 cut(s) 722, 1392, 1977, 2403, 2432
MlsI TGGCCA 2 cut(s) 45, 2591
MluNI TGGCCA 2 cut(s) 45, 2591
MlyI GAGTC 7 cut(s) 172, 338, 497, 697, 1503, 1856, 2134
MmeI TCCRAC 7 cut(s) 465, 474, 519, 874, 1365, 1417, 2257
Mox20I TGGCCA 2 cut(s) 45, 2591
Mph1103I ATGCAT 1 cut(s) 2488
MroXI GAANNNNTTC 2 cut(s) 1860, 2440
MscI TGGCCA 2 cut(s) 45, 2591
MslI CAYNNNNRTG 2 cut(s) 516, 1427
Msp20I TGGCCA 2 cut(s) 45, 2591
MspA1I CMGCKG 2 cut(s) 1257, 1757
MspCI CTTAAG 1 cut(s) 940
MspI CCGG 3 cut(s) 1139, 1764, 2511
MspR9I CCNGG 2 cut(s) 10, 2512
MunI CAATTG 3 cut(s) 312, 2069, 2593
Mva1269I GAATGC 2 cut(s) 1267, 2773
MvaI CCWGG 1 cut(s) 10
MvnI CGCG 1 cut(s) 850
MwoI GCNNNNNNNGC 5 cut(s) 1754, 1760, 1781, 1946, 2436
NciI CCSGG 1 cut(s) 2512
NcoI CCATGG 4 cut(s) 621, 1371, 1941, 2244
NdeII GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
NheI GCTAGC 1 cut(s) 2680
NlaIV GGNNCC 4 cut(s) 1060, 1348, 2078, 2206
NmeAIII GCCGAG 1 cut(s) 2422
NmuCI GTSAC 4 cut(s) 1400, 1418, 2054, 2718
NsiI ATGCAT 1 cut(s) 2488
OliI CACNNNNGTG 1 cut(s) 516
PagI TCATGA 1 cut(s) 2136
PciSI GCTCTTC 1 cut(s) 2738
PctI GAATGC 2 cut(s) 1267, 2773
PdmI GAANNNNTTC 2 cut(s) 1860, 2440
PfeI GAWTC 7 cut(s) 340, 561, 784, 952, 1376, 1459, 2088
PflMI CCANNNNNTGG 1 cut(s) 2250
PkrI GCNGC 5 cut(s) 859, 1088, 1469, 1756, 2619
PleI GAGTC 7 cut(s) 171, 337, 496, 697, 1503, 1855, 2134
PpsI GAGTC 7 cut(s) 171, 337, 496, 697, 1503, 1855, 2134
PshBI ATTAAT 1 cut(s) 1692
PsiI TTATAA 1 cut(s) 933
Psp124BI GAGCTC 3 cut(s) 1392, 1977, 2403
Psp6I CCWGG 1 cut(s) 8
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 1 cut(s) 8
PspN4I GGNNCC 4 cut(s) 1060, 1348, 2078, 2206
PspPI GGNCC 5 cut(s) 496, 961, 1484, 1876, 2321
PsrI GAACNNNNNNTAC 2 cut(s) 2251, 2283
PstNI CAGNNNCTG 3 cut(s) 746, 890, 1048
PsuI RGATCY 2 cut(s) 1531, 2106
PvuII CAGCTG 1 cut(s) 1757
RsaI GTAC 3 cut(s) 1936, 2601, 2688
RsaNI GTAC 3 cut(s) 1935, 2600, 2687
RseI CAYNNNNRTG 2 cut(s) 516, 1427
SacI GAGCTC 3 cut(s) 1392, 1977, 2403
SapI GCTCTTC 1 cut(s) 2738
SatI GCNGC 5 cut(s) 858, 1087, 1468, 1755, 2618
Sau3AI GATC 8 cut(s) 147, 1019, 1531, 1916, 2021, 2106, 2416, 2643
Sau96I GGNCC 5 cut(s) 496, 961, 1484, 1876, 2321
SchI GAGTC 7 cut(s) 172, 338, 497, 697, 1503, 1856, 2134
ScrFI CCNGG 2 cut(s) 10, 2512
SduI GDGCHC 5 cut(s) 722, 1392, 1977, 2403, 2432
SfaNI GCATC 5 cut(s) 1422, 2206, 2300, 2667, 2748
SfcI CTRYAG 2 cut(s) 1758, 2521
SinI GGWCC 5 cut(s) 496, 961, 1484, 1876, 2321
SmiMI CAYNNNNRTG 2 cut(s) 516, 1427
SmlI CTYRAG 8 cut(s) 326, 514, 911, 925, 940, 1411, 1976, 2363
SmoI CTYRAG 8 cut(s) 326, 514, 911, 925, 940, 1411, 1976, 2363
SsiI CCGC 8 cut(s) 55, 450, 686, 850, 1257, 1879, 1962, 2273
SspMI CTAG 3 cut(s) 1229, 2336, 2681
SstI GAGCTC 3 cut(s) 1392, 1977, 2403
StyD4I CCNGG 2 cut(s) 8, 2510
StyI CCWWGG 5 cut(s) 621, 1371, 1882, 1941, 2244
TaqI TCGA 3 cut(s) 950, 1926, 2091
TatI WGTACW 2 cut(s) 1934, 2686
TfiI GAWTC 7 cut(s) 340, 561, 784, 952, 1376, 1459, 2088
TscAI CASTG 7 cut(s) 184, 205, 1519, 1633, 2176, 2437, 2452
TseFI GTSAC 4 cut(s) 1400, 1418, 2054, 2718
TseI GCWGC 5 cut(s) 857, 1086, 1467, 1754, 2617
Tsp45I GTSAC 4 cut(s) 1400, 1418, 2054, 2718
TspDTI ATGAA 5 cut(s) 174, 1334, 2213, 2294, 2756
TspRI CASTG 7 cut(s) 184, 205, 1519, 1633, 2176, 2437, 2452
Van91I CCANNNNNTGG 1 cut(s) 2250
Vha464I CTTAAG 1 cut(s) 940
VpaK11BI GGWCC 5 cut(s) 496, 961, 1484, 1876, 2321
VspI ATTAAT 1 cut(s) 1692
XapI RAATTY 7 cut(s) 751, 862, 916, 1105, 1524, 1726, 2628
XcmI CCANNNNNNNNNTGG 1 cut(s) 1847
XmnI GAANNNNTTC 2 cut(s) 1860, 2440
XspI CTAG 3 cut(s) 1229, 2336, 2681
Zsp2I ATGCAT 1 cut(s) 2488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.