Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005786.1

Orthogroup ID

OG0008490

Physical Location & Seq

Genomic Coordinates Forward (+)

37395 .. 40254

Gene Structure 2860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005786.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

atgatcaatatctccaagcgtctaaatagtagcagtgtttcatggaacataaacagtgaaccaaacccatgtctctggaaaggagttaagtgtaagccacccaccaactcgtctgtaacccaactttccctgtccaagttttctctatcttcctcagatttcctcccaattgtttgccaacttgagtctttggagattcttgatgtgtcagtaaaccatctgaccacaatcccacctgagtttctcacagcttgtggaaacatagatgggctaaagcaactcaatttcagctttaacaatctggtcggttctttacctgactttgttggttttgctgggttggagtcgttggacctttctcgtaatcacttgagtggaggcattggctcagagttggatggattggtaaggctcagaatcttcaacatcagcttcaaccgttttagtgggactatccctacccaacttgggaagtccatggtcttggaggagcttcagctttctgtcaatacatttcaagggataatcccagttaaaattgcggactatcgcaatttgactctgattgatttgagcacaaatcatctttctggttcagttcctgagaattttggacagctatccaagttgaaggttctgattctatcttccaataacttaactggcaaaatcccagacagcctttccaatatcacaagcctcacgcggtttgcagccaatttaaacaagttcgatggtgcagttcctggtggaattacaaaacatctcaaaaatttggacttgagttataatacgttaagtgggtcgattccatcggaccttctgtctccatcgaatttgatgactgtggatttgtctaataacttgttgcagggatcaatacccacagagctgtctccgggactggttcggttgagattgggaagcaattcacttgttgggatggtaccctctgcatcactcccactccagaacttggtgtacttggaaatggaaaacaataagctgaatggtcccatacctcctaaattgggttcttgcagcaaattggcgctgttgaatttggctcagaatgaactgactggggctttgccggtgcagttgggaaacctcaccaatcttcaagtcttgaagcttcaatctaacaatcttgctggaggaatcccaactgagattactaaactgacgtacttgtctgttctgaatatcagcgggaatgctctgactggtacaataccaacagccgtttcaaacttgcagaaccttactagcatgaacttacaaggcaacaatctcagcggttccatccccaacactattggctccatgagttctctgttggagctccaacttggtcacaatttcttgagtggtgacattccaaggatgccagtatctttgcagattgttttgaatctcagcagcaacctttttgaaggaccaattcctaatcatctttccggactcactggattagaaattttggatctatctaacaacaagttctcaggtgagataccctcatttttatctgatcaaatgggagcattgacacagttgatactatctaacaatcagctcactggagttattccacacttcaattcttgggtcttggtcaacacaactggaaataaggatttgattaatgataccacaacctcatcggtaaagaaaggaaattcaaaggctttgataattgcacttgcagctgtggccggtgctgttgctactgtagccatgaccatccttgctgtatcactatcacggcacagttacagggttaatgatgaccaagtggagtctggagaagatgttcctcttcctgaggtccgccaaggtagtctcttaactgccaacgcaattcacagatcaagtatcgatttcagtacagccatggaggcagtttctgaccccgcaaacattgagctcaagactaagttttcaacttactacaaggccacaatgccgtctggatcaagctactttgtcaagaaactcaactggagtgacaagatattccaattggggagccatgacagattcgagaacgatttacagatatttggaaaactgagcaattccaatgtcatgactcctttggcctattttacgactgttgacagtgcttatctgttctatgagtttgctccaaaaggcaccctctttgatgcccttcattgtagctcagacaatgccatggattgggcaagtagatacagttctgcggttggagtagctcagggtcttgcttttcttcatggatgcacttcaggtccaatactcctcctagacctgtcaagccgaagcattttgctcaagtccctcaaagagcctcttattggagacgccgagctctgcaaagtgatcgatccctcaaagagcactggaagcctttccactgttgctggttcggttggttatattcctccagagtatgcatacactatgagggttacagtagccgggaacatctatagcttcggggtcattctccttgaattgctgacaggaaggccagcagttagtgaagggattgagttggccaattgggtactaagtaactcaaggcagcaagataaaattcttgatttgacgatcagcaggacatcaagtgctgtcagaagccagatgctagctgtactgaaagttgctcttggttgtgttagtgtgtcaccagaagcaaggccaagaatgaagagcgttcttaggatgcttctgaatgcaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

910

Amino Acids

97.59

Weight (kDa)

6.66

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34420
fragaria_vesca	FvH4_2g12120 FvH4_5g16590 FvH4_5g16600
malus_domestica	MD05G1041000.v1.1 MD10G1047000.v1.1 MD10G1047300.v1.1
prunus_persica	Prupe.8G051700_v2.0.a1 Prupe.8G056100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0272061 RchiOBHm_Chr6g0272071 RchiOBHm_Chr6g0272091
rosa_laevigata	RLG00000013703
rosa_multiflora	Rmu_co8127610.1_g000001 Rmu_sc0005786.1_g000007 Rmu_sc0013301.1_g000003
rosa_roxburghii	Rroxscaffold_7G00196610
rosa_rugosa	Rorug06G0065500
rosa_samantha	Rh6AG182800 Rh6BG184300 Rh6CG183900 Rh6DG175500
rosa_wichuraiana	Rw6G015730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	789
AasI	GACNNNNNNGTC	1 cut(s)	1192
Acc65I	GGTACC	1 cut(s)	946
AccB1I	GGYRCC	2 cut(s)	946, 2159
AccB7I	CCANNNNNTGG	2 cut(s)	976, 2205
AccII	CGCG	1 cut(s)	706
AccIII	TCCGGA	1 cut(s)	1460
AciI	CCGC	7 cut(s)	542, 706, 1212, 1299, 1834, 1917, 2228
AclWI	GGATC	4 cut(s)	883, 1494, 1984, 2366
AcoI	YGGCCR	2 cut(s)	1716, 2544
AcsI	RAATTY	7 cut(s)	607, 772, 835, 1060, 1479, 1681, 2583
AcuI	CTGAAG	2 cut(s)	479, 2256
AcyI	GRCGYC	1 cut(s)	2349
AfaI	GTAC	7 cut(s)	948, 983, 1190, 1231, 1891, 2556, 2643
AfiI	CCNNNNNNNGG	5 cut(s)	468, 976, 1031, 2205, 2342
AhdI	GACNNNNNGTC	1 cut(s)	823
AjnI	CCWGG	1 cut(s)	745
AjuI	GAANNNNNNNTTGG	2 cut(s)	1231, 1263
AleI	CACNNNNGTG	1 cut(s)	372
AloI	GAACNNNNNNTCC	2 cut(s)	1800, 1832
Alw21I	GWGCWC	5 cut(s)	578, 1347, 1932, 2358, 2387
Alw26I	GTCTC	5 cut(s)	77, 831, 900, 1850, 2340
AlwI	GGATC	4 cut(s)	883, 1494, 1984, 2366
AlwNI	CAGNNNCTG	3 cut(s)	602, 746, 1910
Aor13HI	TCCGGA	1 cut(s)	1460
AoxI	GGCC	6 cut(s)	1716, 1959, 2103, 2516, 2544, 2687
ApeKI	GCWGC	5 cut(s)	713, 1041, 1422, 1709, 2572
ApoI	RAATTY	7 cut(s)	607, 772, 835, 1060, 1479, 1681, 2583
ArsI	GACNNNNNNTTYG	4 cut(s)	835, 867, 1072, 1104
AseI	ATTAAT	1 cut(s)	1647
Asp700I	GAANNNNTTC	3 cut(s)	928, 1815, 2395
Asp718I	GGTACC	1 cut(s)	946
AspLEI	GCGC	1 cut(s)	1054
AspS9I	GGNCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
AsuC2I	CCSGG	2 cut(s)	900, 2467
AsuHPI	GGTGA	4 cut(s)	1105, 1385, 1523, 2667
AsuNHI	GCTAGC	1 cut(s)	2635
AvaII	GGWCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
AxyI	CCTNAGG	1 cut(s)	1827
BalI	TGGCCA	1 cut(s)	2546
BanI	GGYRCC	2 cut(s)	946, 2159
BanII	GRGCYC	3 cut(s)	1347, 1932, 2358
Bbv12I	GWGCWC	5 cut(s)	578, 1347, 1932, 2358, 2387
BbvI	GCAGC	5 cut(s)	725, 1053, 1434, 1721, 2584
BccI	CCATC	9 cut(s)	225, 260, 392, 728, 820, 838, 937, 1313, 1754
BceAI	ACGGC	3 cut(s)	1229, 1784, 1954
BcgI	CGANNNNNNTGC	2 cut(s)	2350, 2384
BciT130I	CCWGG	1 cut(s)	747
BclI	TGATCA	2 cut(s)	3, 1534
BcnI	CCSGG	2 cut(s)	900, 2467
BcoDI	GTCTC	5 cut(s)	77, 831, 900, 1850, 2340
BfaI	CTAG	3 cut(s)	1269, 2291, 2636
BfmI	CTRYAG	2 cut(s)	1734, 2476
BfoI	RGCGCY	1 cut(s)	1055
BglI	GCCNNNNNGGC	1 cut(s)	1901
BisI	GCNGC	5 cut(s)	714, 1042, 1423, 1710, 2573
BlsI	GCNGC	5 cut(s)	715, 1043, 1424, 1711, 2574
Bme1390I	CCNGG	3 cut(s)	747, 900, 2467
Bme18I	GGWCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
BmeRI	GACNNNNNGTC	1 cut(s)	823
BmgT120I	GGNCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
BmiI	GGNNCC	6 cut(s)	948, 1015, 1303, 1324, 2033, 2161
BmrFI	CCNGG	3 cut(s)	747, 900, 2467
BmrI	ACTGGG	2 cut(s)	524, 1092
BmsI	GCATC	6 cut(s)	965, 1377, 2161, 2255, 2622, 2703
BmtI	GCTAGC	1 cut(s)	2639
BmuI	ACTGGG	2 cut(s)	524, 1092
BplI	GAGNNNNNCTC	2 cut(s)	1505, 1537
BpmI	CTGGAG	6 cut(s)	953, 1176, 1605, 1827, 2026, 2415
Bpu10I	CCTNAGC	1 cut(s)	2241
BpuEI	CTTGAG	7 cut(s)	203, 391, 802, 1387, 1916, 2303, 2551
BpuMI	CCSGG	2 cut(s)	900, 2467
Bsa29I	ATCGAT	2 cut(s)	1881, 2370
BsaBI	GATNNNNATC	1 cut(s)	8
BsaHI	GRCGYC	1 cut(s)	2349
BsaJI	CCNNGG	5 cut(s)	477, 1382, 1837, 1896, 2199
BsaWI	WCCGGW	1 cut(s)	1460
BsaXI	ACNNNNNCTCC	4 cut(s)	951, 981, 1800, 1830
Bsc4I	CCNNNNNNNGG	5 cut(s)	468, 976, 1031, 2205, 2342
Bse118I	RCCGGY	2 cut(s)	1093, 1718
Bse21I	CCTNAGG	1 cut(s)	1827
Bse8I	GATNNNNATC	1 cut(s)	8
BseAI	TCCGGA	1 cut(s)	1460
BseBI	CCWGG	1 cut(s)	747
BseCI	ATCGAT	2 cut(s)	1881, 2370
BseDI	CCNNGG	5 cut(s)	477, 1382, 1837, 1896, 2199
BseGI	GGATG	7 cut(s)	403, 948, 1305, 1392, 1746, 2270, 2718
BseJI	GATNNNNATC	1 cut(s)	8
BseLI	CCNNNNNNNGG	5 cut(s)	468, 976, 1031, 2205, 2342
BseRI	GAGGAG	2 cut(s)	503, 2276
BseXI	GCAGC	5 cut(s)	725, 1053, 1434, 1721, 2584
BseYI	CCCAGC	1 cut(s)	335
BsgI	GTGCAG	2 cut(s)	759, 1118
Bsh1236I	CGCG	1 cut(s)	706
BshFI	GGCC	6 cut(s)	1718, 1961, 2105, 2518, 2546, 2689
BshNI	GGYRCC	2 cut(s)	946, 2159
BshVI	ATCGAT	2 cut(s)	1881, 2370
BsiHKAI	GWGCWC	5 cut(s)	578, 1347, 1932, 2358, 2387
BsiSI	CCGG	5 cut(s)	899, 1094, 1461, 1719, 2466
BslFI	GGGAC	4 cut(s)	463, 915, 999, 2308
BslI	CCNNNNNNNGG	5 cut(s)	468, 976, 1031, 2205, 2342
BsmAI	GTCTC	5 cut(s)	77, 831, 900, 1850, 2340
BsmBI	CGTCTC	1 cut(s)	2340
BsmFI	GGGAC	4 cut(s)	463, 915, 999, 2308
BsmI	GAATGC	2 cut(s)	1222, 2728
BsnI	GGCC	6 cut(s)	1718, 1961, 2105, 2518, 2546, 2689
Bsp1286I	GDGCHC	5 cut(s)	578, 1347, 1932, 2358, 2387
Bsp13I	TCCGGA	1 cut(s)	1460
Bsp143I	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
Bsp19I	CCATGG	3 cut(s)	477, 1896, 2199
BspACI	CCGC	7 cut(s)	542, 706, 1212, 1299, 1834, 1917, 2228
BspANI	GGCC	6 cut(s)	1718, 1961, 2105, 2518, 2546, 2689
BspDI	ATCGAT	2 cut(s)	1881, 2370
BspEI	TCCGGA	1 cut(s)	1460
BspFNI	CGCG	1 cut(s)	706
BspHI	TCATGA	1 cut(s)	2091
BspLI	GGNNCC	6 cut(s)	948, 1015, 1303, 1324, 2033, 2161
BspOI	GCTAGC	1 cut(s)	2639
BspPI	GGATC	4 cut(s)	883, 1494, 1984, 2366
BspQI	GCTCTTC	1 cut(s)	2693
BspT107I	GGYRCC	2 cut(s)	946, 2159
BsrFI	RCCGGY	2 cut(s)	1093, 1718
BssAI	RCCGGY	2 cut(s)	1093, 1718
BssECI	CCNNGG	5 cut(s)	477, 1382, 1837, 1896, 2199
BssMI	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
BssNI	GRCGYC	1 cut(s)	2349
BssT1I	CCWWGG	5 cut(s)	477, 1382, 1837, 1896, 2199
Bst2UI	CCWGG	1 cut(s)	747
Bst6I	CTCTTC	2 cut(s)	1827, 2693
BstACI	GRCGYC	1 cut(s)	2349
BstC8I	GCNNGC	2 cut(s)	2520, 2637
BstDSI	CCRYGG	3 cut(s)	477, 1896, 2199
BstF5I	GGATG	7 cut(s)	403, 948, 1305, 1392, 1746, 2270, 2718
BstFNI	CGCG	1 cut(s)	706
BstH2I	RGCGCY	1 cut(s)	1055
BstHHI	GCGC	1 cut(s)	1054
BstKTI	GATC	9 cut(s)	6, 878, 1489, 1537, 1874, 1979, 2370, 2374, 2601
BstMAI	GTCTC	5 cut(s)	77, 831, 900, 1850, 2340
BstMBI	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
BstMWI	GCNNNNNNNGC	5 cut(s)	1709, 1715, 1736, 1901, 2391
BstNI	CCWGG	1 cut(s)	747
BstSCI	CCNGG	3 cut(s)	745, 898, 2465
BstSFI	CTRYAG	2 cut(s)	1734, 2476
BstUI	CGCG	1 cut(s)	706
BstV1I	GCAGC	5 cut(s)	725, 1053, 1434, 1721, 2584
BstX2I	RGATCY	1 cut(s)	1486
BstXI	CCANNNNNNTGG	2 cut(s)	75, 484
BstYI	RGATCY	1 cut(s)	1486
Bsu15I	ATCGAT	2 cut(s)	1881, 2370
Bsu36I	CCTNAGG	1 cut(s)	1827
BsuRI	GGCC	6 cut(s)	1718, 1961, 2105, 2518, 2546, 2689
BsuTUI	ATCGAT	2 cut(s)	1881, 2370
BtgI	CCRYGG	3 cut(s)	477, 1896, 2199
BtsCI	GGATG	7 cut(s)	403, 948, 1305, 1392, 1746, 2270, 2718
BtsI	GCAGTG	1 cut(s)	40
BtsIMutI	CAGTG	7 cut(s)	40, 61, 1467, 1581, 2131, 2385, 2400
Cac8I	GCNNGC	2 cut(s)	2520, 2637
CaiI	CAGNNNCTG	3 cut(s)	602, 746, 1910
CciI	TCATGA	1 cut(s)	2091
CfoI	GCGC	1 cut(s)	1054
Cfr10I	RCCGGY	2 cut(s)	1093, 1718
Cfr13I	GGNCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
ClaI	ATCGAT	2 cut(s)	1881, 2370
CseI	GACGC	2 cut(s)	8, 2357
Csp6I	GTAC	7 cut(s)	947, 982, 1189, 1230, 1890, 2555, 2642
CviQI	GTAC	7 cut(s)	947, 982, 1189, 1230, 1890, 2555, 2642
DpnI	GATC	9 cut(s)	5, 877, 1488, 1536, 1873, 1978, 2369, 2373, 2600
DpnII	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
DraI	TTTAAA	1 cut(s)	723
DrdI	GACNNNNNNGTC	1 cut(s)	1192
DriI	GACNNNNNGTC	1 cut(s)	823
DseDI	GACNNNNNNGTC	1 cut(s)	1192
EaeI	YGGCCR	2 cut(s)	1716, 2544
Eam1104I	CTCTTC	2 cut(s)	1827, 2693
Eam1105I	GACNNNNNGTC	1 cut(s)	823
EarI	CTCTTC	2 cut(s)	1827, 2693
EciI	GGCGGA	1 cut(s)	1823
Ecl136II	GAGCTC	3 cut(s)	1345, 1930, 2356
Eco130I	CCWWGG	5 cut(s)	477, 1382, 1837, 1896, 2199
Eco24I	GRGCYC	3 cut(s)	1347, 1932, 2358
Eco47I	GGWCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
Eco53kI	GAGCTC	3 cut(s)	1345, 1930, 2356
Eco57I	CTGAAG	2 cut(s)	479, 2256
Eco81I	CCTNAGG	1 cut(s)	1827
EcoICRI	GAGCTC	3 cut(s)	1345, 1930, 2356
EcoRII	CCWGG	1 cut(s)	745
EcoT14I	CCWWGG	5 cut(s)	477, 1382, 1837, 1896, 2199
EcoT22I	ATGCAT	1 cut(s)	2443
EcoT38I	GRGCYC	3 cut(s)	1347, 1932, 2358
ErhI	CCWWGG	5 cut(s)	477, 1382, 1837, 1896, 2199
Esp3I	CGTCTC	1 cut(s)	2340
FalI	AAGNNNNNCTT	4 cut(s)	2322, 2354, 2640, 2672
FaqI	GGGAC	4 cut(s)	463, 915, 999, 2308
FauI	CCCGC	2 cut(s)	1205, 1924
FbaI	TGATCA	2 cut(s)	3, 1534
Fnu4HI	GCNGC	5 cut(s)	714, 1042, 1423, 1710, 2573
FokI	GGATG	7 cut(s)	410, 955, 1292, 1399, 1733, 2277, 2725
FriOI	GRGCYC	3 cut(s)	1347, 1932, 2358
Fsp4HI	GCNGC	5 cut(s)	714, 1042, 1423, 1710, 2573
FspBI	CTAG	3 cut(s)	1269, 2291, 2636
GlaI	GCGC	1 cut(s)	1053
GluI	GCNGC	5 cut(s)	714, 1042, 1423, 1710, 2573
GsaI	CCCAGC	1 cut(s)	339
GsuI	CTGGAG	6 cut(s)	953, 1176, 1605, 1827, 2026, 2415
HaeII	RGCGCY	1 cut(s)	1055
HaeIII	GGCC	6 cut(s)	1718, 1961, 2105, 2518, 2546, 2689
HapII	CCGG	5 cut(s)	899, 1094, 1461, 1719, 2466
HgaI	GACGC	2 cut(s)	8, 2357
HhaI	GCGC	1 cut(s)	1054
Hin1I	GRCGYC	1 cut(s)	2349
Hin6I	GCGC	1 cut(s)	1052
HinP1I	GCGC	1 cut(s)	1052
HincII	GTYRAC	2 cut(s)	1621, 2122
HindII	GTYRAC	2 cut(s)	1621, 2122
HindIII	AAGCTT	1 cut(s)	1133
HpaII	CCGG	5 cut(s)	899, 1094, 1461, 1719, 2466
HphI	GGTGA	4 cut(s)	1105, 1385, 1523, 2667
Hpy166II	GTNNAC	5 cut(s)	59, 214, 982, 1621, 2122
Hpy8I	GTNNAC	5 cut(s)	59, 214, 982, 1621, 2122
HpyAV	CCTTC	6 cut(s)	625, 830, 1430, 2186, 2508, 2525
HpyCH4IV	ACGT	2 cut(s)	794, 1187
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1709, 1715, 1736, 1901, 2391
HpySE526I	ACGT	2 cut(s)	794, 1187
Hsp92I	GRCGYC	1 cut(s)	2349
HspAI	GCGC	1 cut(s)	1052
Kpn2I	TCCGGA	1 cut(s)	1460
KpnI	GGTACC	1 cut(s)	950
Ksp22I	TGATCA	2 cut(s)	3, 1534
Kzo9I	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
LguI	GCTCTTC	1 cut(s)	2693
LmnI	GCTCC	7 cut(s)	490, 1328, 1342, 1350, 1544, 2031, 2155
Lsp1109I	GCAGC	5 cut(s)	725, 1053, 1434, 1721, 2584
LweI	GCATC	6 cut(s)	965, 1377, 2161, 2255, 2622, 2703
MaeI	CTAG	3 cut(s)	1269, 2291, 2636
MaeII	ACGT	2 cut(s)	794, 1187
MaeIII	GTNAC	8 cut(s)	115, 1355, 1373, 1775, 2009, 2455, 2561, 2673
MalI	GATC	9 cut(s)	5, 877, 1488, 1536, 1873, 1978, 2369, 2373, 2600
MboI	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
MboII	GAAGA	8 cut(s)	141, 412, 639, 1112, 1814, 1823, 2249, 2710
MfeI	CAATTG	3 cut(s)	168, 2024, 2548
MflI	RGATCY	1 cut(s)	1486
MhlI	GDGCHC	5 cut(s)	578, 1347, 1932, 2358, 2387
MlsI	TGGCCA	1 cut(s)	2546
MluNI	TGGCCA	1 cut(s)	2546
MlyI	GAGTC	6 cut(s)	194, 353, 553, 1458, 1811, 2089
MmeI	TCCRAC	6 cut(s)	321, 330, 375, 1320, 1372, 2212
Mox20I	TGGCCA	1 cut(s)	2546
Mph1103I	ATGCAT	1 cut(s)	2443
MroI	TCCGGA	1 cut(s)	1460
MroXI	GAANNNNTTC	3 cut(s)	928, 1815, 2395
MscI	TGGCCA	1 cut(s)	2546
MseI	TTAA	9 cut(s)	87, 294, 534, 659, 722, 797, 1647, 1785, 1850
MslI	CAYNNNNRTG	1 cut(s)	372
Msp20I	TGGCCA	1 cut(s)	2546
MspA1I	CMGCKG	3 cut(s)	1212, 1299, 1712
MspI	CCGG	5 cut(s)	899, 1094, 1461, 1719, 2466
MspR9I	CCNGG	3 cut(s)	747, 900, 2467
MunI	CAATTG	3 cut(s)	168, 2024, 2548
Mva1269I	GAATGC	2 cut(s)	1222, 2728
MvaI	CCWGG	1 cut(s)	747
MvnI	CGCG	1 cut(s)	706
MwoI	GCNNNNNNNGC	5 cut(s)	1709, 1715, 1736, 1901, 2391
NciI	CCSGG	2 cut(s)	900, 2467
NcoI	CCATGG	3 cut(s)	477, 1896, 2199
NdeII	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
NheI	GCTAGC	1 cut(s)	2635
NlaIV	GGNNCC	6 cut(s)	948, 1015, 1303, 1324, 2033, 2161
NmeAIII	GCCGAG	1 cut(s)	2377
NmuCI	GTSAC	4 cut(s)	1355, 1373, 2009, 2673
NsiI	ATGCAT	1 cut(s)	2443
OliI	CACNNNNGTG	1 cut(s)	372
PagI	TCATGA	1 cut(s)	2091
PciSI	GCTCTTC	1 cut(s)	2693
PctI	GAATGC	2 cut(s)	1222, 2728
PdmI	GAANNNNTTC	3 cut(s)	928, 1815, 2395
PfeI	GAWTC	7 cut(s)	196, 417, 640, 808, 1161, 1414, 2043
PflMI	CCANNNNNTGG	2 cut(s)	976, 2205
PfoI	TCCNGGA	1 cut(s)	898
PkrI	GCNGC	5 cut(s)	715, 1043, 1424, 1711, 2574
PleI	GAGTC	6 cut(s)	193, 352, 553, 1458, 1810, 2089
PpsI	GAGTC	6 cut(s)	193, 352, 553, 1458, 1810, 2089
PshBI	ATTAAT	1 cut(s)	1647
PsiI	TTATAA	1 cut(s)	789
Psp124BI	GAGCTC	3 cut(s)	1347, 1932, 2358
Psp6I	CCWGG	1 cut(s)	745
PspFI	CCCAGC	1 cut(s)	335
PspGI	CCWGG	1 cut(s)	745
PspN4I	GGNNCC	6 cut(s)	948, 1015, 1303, 1324, 2033, 2161
PspPI	GGNCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
PsrI	GAACNNNNNNTAC	4 cut(s)	965, 997, 2206, 2238
PstNI	CAGNNNCTG	3 cut(s)	602, 746, 1910
PsuI	RGATCY	1 cut(s)	1486
PvuII	CAGCTG	1 cut(s)	1712
RsaI	GTAC	7 cut(s)	948, 983, 1190, 1231, 1891, 2556, 2643
RsaNI	GTAC	7 cut(s)	947, 982, 1189, 1230, 1890, 2555, 2642
RseI	CAYNNNNRTG	1 cut(s)	372
SacI	GAGCTC	3 cut(s)	1347, 1932, 2358
SapI	GCTCTTC	1 cut(s)	2693
SaqAI	TTAA	9 cut(s)	87, 294, 534, 659, 722, 797, 1647, 1785, 1850
SatI	GCNGC	5 cut(s)	714, 1042, 1423, 1710, 2573
Sau3AI	GATC	9 cut(s)	3, 875, 1486, 1534, 1871, 1976, 2367, 2371, 2598
Sau96I	GGNCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
SchI	GAGTC	6 cut(s)	194, 353, 553, 1458, 1811, 2089
ScrFI	CCNGG	3 cut(s)	747, 900, 2467
SduI	GDGCHC	5 cut(s)	578, 1347, 1932, 2358, 2387
SfaNI	GCATC	6 cut(s)	965, 1377, 2161, 2255, 2622, 2703
SfcI	CTRYAG	2 cut(s)	1734, 2476
SinI	GGWCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
SmiMI	CAYNNNNRTG	1 cut(s)	372
SmlI	CTYRAG	7 cut(s)	182, 370, 781, 1366, 1931, 2318, 2566
SmoI	CTYRAG	7 cut(s)	182, 370, 781, 1366, 1931, 2318, 2566
SsiI	CCGC	7 cut(s)	542, 706, 1212, 1299, 1834, 1917, 2228
SspMI	CTAG	3 cut(s)	1269, 2291, 2636
SstI	GAGCTC	3 cut(s)	1347, 1932, 2358
StyD4I	CCNGG	3 cut(s)	745, 898, 2465
StyI	CCWWGG	5 cut(s)	477, 1382, 1837, 1896, 2199
TaiI	ACGT	2 cut(s)	797, 1190
TaqI	TCGA	6 cut(s)	732, 806, 833, 1881, 2046, 2370
TatI	WGTACW	3 cut(s)	981, 1889, 2641
TfiI	GAWTC	7 cut(s)	196, 417, 640, 808, 1161, 1414, 2043
Tru1I	TTAA	9 cut(s)	87, 294, 534, 659, 722, 797, 1647, 1785, 1850
Tru9I	TTAA	9 cut(s)	87, 294, 534, 659, 722, 797, 1647, 1785, 1850
TscAI	CASTG	7 cut(s)	40, 61, 1474, 1588, 2131, 2392, 2407
TseFI	GTSAC	4 cut(s)	1355, 1373, 2009, 2673
TseI	GCWGC	5 cut(s)	713, 1041, 1422, 1709, 2572
Tsp45I	GTSAC	4 cut(s)	1355, 1373, 2009, 2673
TspDTI	ATGAA	6 cut(s)	30, 1089, 1289, 2168, 2249, 2711
TspRI	CASTG	7 cut(s)	40, 61, 1474, 1588, 2131, 2392, 2407
Van91I	CCANNNNNTGG	2 cut(s)	976, 2205
VpaK11BI	GGWCC	6 cut(s)	352, 817, 1013, 1439, 1831, 2276
VspI	ATTAAT	1 cut(s)	1647
XapI	RAATTY	7 cut(s)	607, 772, 835, 1060, 1479, 1681, 2583
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1802
XmnI	GAANNNNTTC	3 cut(s)	928, 1815, 2395
XspI	CTAG	3 cut(s)	1269, 2291, 2636
Zsp2I	ATGCAT	1 cut(s)	2443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.