Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0013120

Physical Location & Seq

Genomic Coordinates Forward (+)

15118872 .. 15120894

Gene Structure 2023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g17580.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAGCTACTCAACCACAGTGGCTCTAGCGAACCCAGCATTCCCGCCAAATTCAAACTCAAAACTCAGAAATCCCCAAAACCGGAAAGAACTCATCTCCCTGTTACAGAAATGCAAACACTATCAGATTCCACAAATACACGCTAAAATAATCAGAAACGGCCAAGACCAAGACCCATTCATCGTCTTCGATCTTCTTCGTCTCTGCCCCATCGACTACGCCTCCAAGGTTTTCCGACGAACCCAATCCCCAAATGTGTATCTCTACACTGCTCTCATTGATGGGTTCGTGTCGTCTGGTCATTACATGGATGCAATTCGTCTTTACTTTGAAATGGTGAATGAGTATATATTTCCGGACAAATATGTCATCACTTCTGTGTTGAAAGCTTGCGGGTTTGGGTTGGCTGTGGAGGAGAGCAGACAAGTACATGCGCAGGCTTTGAAGCTTGAGCTGTCATCGAATCGGTCAATAAGATTGAAGCTGATGGGTGTTTATGGGAAGTGCGGTGAGTTTGAAAGTGCGCGTCAGGTGTTTGATGAAATGTCTGAGAATGATGCAGTTGCTGCGACGGTGATGATAACTTCTTATGCTGATCATGGACTAGTTGAGGAGGCGAGTGGTGTTTTTGACCGGCTCAGGAAGAAGGATACGGTTTGCTGGACTGCGATGATTGACGGGTTGGTTAAGAATGGGGAGATGAATAGGGCTTTGGAGGTGTTTAGGGAGATGCAGAGGGAGAATGTGAGGCCTAATGAAGTTACATTGGTTTGTGTTCTATCTGCTTGTTCGCAGTTGGGAGCTTTGGAGCTCAGAAGATGGGTTCGGTTGTATATGGAGAAGAATAAAATTGAATGCAATTACATTGTGGGTGGTGCTCTGATTAATATGTATTCGAGGTGTGGTGATATTGATGGGGCGGTAGAAGTGTTCAGTTGGATGAAAGAGAGAGATGTCAGTACCTATAATTCCATGATTGAGGGGCTTGGAATGCACGGGAAGAGCACCATGGCTATTGAAATGTTCCGGGAAATGAGGGAACGAGGCCTTAGGCCAAATAGCATTACATTTGTTAAAGTGTTGAATGCATGTAGCCATGGCGGTTTGGTGGAGTTGGGGTTTGAGATATTCCATTCCATGACTAGTAGTCACAGAATTGAACCACAAATAGAATACTATGGATGCATGGTTGATCTTCTAGCTCGTTCAGGACAGATTGAAGAGGCGTATAGTTTCATTGAAAGAATGAAAATAAAACCAGATCACATCATGTTGGGGACTTTGCTAAGTGCTTGTAAAATCCATGGAAACCTCGAATTAGGAGAAAGGGTAGCCGAAATGTTGGTAAATTGTAACGATGCAGATTCAGGAACGTATGTTTTGCTGTCAAATGTGTATGCTGCCTCAGGGAAGTGGAAAGAGGCTGCAGAAGTGAGAGCCTTGATCAAGGAAGCTGGAACTCCAAAGGAGCCTGGTTGTAGTTTGATTGAAGTGAACAATGAGATCCATGAGTTCCTTTTGGGAGACATTAGACACCCAAAGAAAGAAAATATCTATAGAAAGTTGGAGGAGCTAAACCCTGTGTTGAAAAGGGAAGGATATTCGCCTGCGACACAGGTGGTTTTGCATGATACTGATGAAAGGCAAAAGGAATGGGCTCTGGCAATACATAGTGAGAGGCTTGCCATATGCTACGGACTAATCTCTACTAAACCGTGTACCACTTTAAGGATTGTAAAAAATTTGAGGGTCTGCAATGACTGTCACTCGATGATCAAGTTGATAGCTAAGACTACTAAGAGAAAGATAATAATGAGGGATCGCCATAGGTTCCATCATTTCGAAAATGGGGCTTGTTCTTGTGGTGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

626

Amino Acids

71.09

Weight (kDa)

7.77

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	84 - 131	2.6e-08	PPR repeat family
PPR_2	PF13041	216 - 264	7e-14	PPR repeat family
PPR_1	PF12854	217 - 245	2e-06	PPR repeat
PPR	PF01535	219 - 249	7.1e-09	PPR repeat
PPR_2	PF13041	317 - 365	5.5e-13	PPR repeat family
PPR_3	PF13812	318 - 364	2.6e-07	Pentatricopeptide repeat domain
PPR	PF01535	320 - 350	2.8e-08	PPR repeat
E_motif	PF20431	435 - 497	2.1e-18	E motif
DYW_deaminase	PF14432	533 - 625	4.5e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59200
fragaria_vesca	FvH4_2g17580
malus_domestica	MD10G1149200.v1.1 MD10G1149700.v1.1
prunus_persica	Prupe.8G188000_v2.0.a1
pyrus_communis	pycom10g12880 pycom10g12910
rosa_chinensis	RchiOBHm_Chr6g0282521
rosa_laevigata	RLG00000012888
rosa_multiflora	Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029
rosa_rugosa	Rorug06G0147100 Rorug06G0147200
rosa_samantha	Rh6CG262700 Rh6DG254600
rosa_wichuraiana	Rw6G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	365
Acc16I	TGCGCA	1 cut(s)	435
AccII	CGCG	1 cut(s)	526
AccIII	TCCGGA	1 cut(s)	355
AciI	CCGC	5 cut(s)	44, 393, 507, 920, 1101
AclWI	GGATC	2 cut(s)	1498, 1827
AcoI	YGGCCR	1 cut(s)	160
AcsI	RAATTY	2 cut(s)	49, 1741
AfaI	GTAC	3 cut(s)	429, 961, 1720
AfiI	CCNNNNNNNGG	2 cut(s)	81, 1728
AhdI	GACNNNNNGTC	1 cut(s)	1146
AhlI	ACTAGT	2 cut(s)	604, 1142
AjnI	CCWGG	1 cut(s)	1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	695, 727
AleI	CACNNNNGTG	1 cut(s)	377
Alw21I	GWGCWC	3 cut(s)	813, 880, 1007
Alw26I	GTCTC	2 cut(s)	206, 1518
AlwI	GGATC	2 cut(s)	1498, 1827
AlwNI	CAGNNNCTG	1 cut(s)	566
Aor13HI	TCCGGA	1 cut(s)	355
AoxI	GGCC	4 cut(s)	160, 749, 1045, 1052
ApeKI	GCWGC	3 cut(s)	566, 1400, 1424
ApoI	RAATTY	2 cut(s)	49, 1741
AseI	ATTAAT	1 cut(s)	885
AspLEI	GCGC	2 cut(s)	436, 526
AsuC2I	CCSGG	1 cut(s)	1028
AsuHPI	GGTGA	5 cut(s)	349, 521, 586, 917, 1877
AsuII	TTCGAA	1 cut(s)	1842
AxyI	CCTNAGG	2 cut(s)	1049, 1405
BanII	GRGCYC	2 cut(s)	813, 1660
BbsI	GAAGAC	1 cut(s)	178
Bbv12I	GWGCWC	3 cut(s)	813, 880, 1007
BbvI	GCAGC	3 cut(s)	553, 1387, 1411
BccI	CCATC	6 cut(s)	218, 275, 481, 813, 908, 1842
BceAI	ACGGC	1 cut(s)	175
BciT130I	CCWGG	1 cut(s)	1473
BciVI	GTATCC	1 cut(s)	643
BclI	TGATCA	3 cut(s)	595, 1443, 1773
BcnI	CCSGG	1 cut(s)	1028
BcoDI	GTCTC	2 cut(s)	206, 1518
BcuI	ACTAGT	2 cut(s)	604, 1142
BfaI	CTAG	4 cut(s)	26, 605, 1143, 1199
BfmI	CTRYAG	2 cut(s)	1425, 1555
BfuI	GTATCC	1 cut(s)	643
BisI	GCNGC	3 cut(s)	567, 1401, 1425
BlsI	GCNGC	3 cut(s)	568, 1402, 1426
Bme1390I	CCNGG	2 cut(s)	1028, 1473
BmeRI	GACNNNNNGTC	1 cut(s)	1146
BmiI	GGNNCC	2 cut(s)	1470, 1832
BmrFI	CCNGG	2 cut(s)	1028, 1473
BmsI	GCATC	5 cut(s)	301, 547, 720, 1172, 1348
BpiI	GAAGAC	1 cut(s)	178
Bpu10I	CCTNAGC	1 cut(s)	638
Bpu14I	TTCGAA	1 cut(s)	1842
BpuEI	CTTGAG	1 cut(s)	470
BpuMI	CCSGG	1 cut(s)	1028
BsaJI	CCNNGG	4 cut(s)	225, 1008, 1096, 1303
BsaWI	WCCGGW	2 cut(s)	81, 355
BsaXI	ACNNNNNCTCC	6 cut(s)	206, 236, 1103, 1133, 1314, 1344
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 1728
Bse118I	RCCGGY	1 cut(s)	633
Bse1I	ACTGG	1 cut(s)	1877
Bse21I	CCTNAGG	2 cut(s)	1049, 1405
Bse3DI	GCAATG	1 cut(s)	1762
BseAI	TCCGGA	1 cut(s)	355
BseBI	CCWGG	1 cut(s)	1473
BseDI	CCNNGG	4 cut(s)	225, 1008, 1096, 1303
BseGI	GGATG	3 cut(s)	316, 945, 1187
BseLI	CCNNNNNNNGG	2 cut(s)	81, 1728
BseMI	GCAATG	1 cut(s)	1762
BseMII	CTCAG	5 cut(s)	79, 540, 652, 826, 1419
BseNI	ACTGG	1 cut(s)	1877
BseRI	GAGGAG	3 cut(s)	428, 626, 1583
BseXI	GCAGC	3 cut(s)	553, 1387, 1411
BseYI	CCCAGC	1 cut(s)	34
Bsh1236I	CGCG	1 cut(s)	526
BshFI	GGCC	4 cut(s)	162, 751, 1047, 1054
BsiHKAI	GWGCWC	3 cut(s)	813, 880, 1007
BsiSI	CCGG	4 cut(s)	82, 356, 634, 1027
BslFI	GGGAC	1 cut(s)	1291
BslI	CCNNNNNNNGG	2 cut(s)	81, 1728
BsmAI	GTCTC	2 cut(s)	206, 1518
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	1 cut(s)	1291
BsmI	GAATGC	4 cut(s)	38, 860, 996, 1090
BsnI	GGCC	4 cut(s)	162, 751, 1047, 1054
Bsp119I	TTCGAA	1 cut(s)	1842
Bsp1286I	GDGCHC	4 cut(s)	813, 880, 1007, 1660
Bsp13I	TCCGGA	1 cut(s)	355
Bsp143I	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
Bsp19I	CCATGG	3 cut(s)	1008, 1096, 1303
BspACI	CCGC	5 cut(s)	44, 393, 507, 920, 1101
BspANI	GGCC	4 cut(s)	162, 751, 1047, 1054
BspCNI	CTCAG	5 cut(s)	78, 541, 651, 825, 1418
BspEI	TCCGGA	1 cut(s)	355
BspFNI	CGCG	1 cut(s)	526
BspLI	GGNNCC	2 cut(s)	1470, 1832
BspMAI	CTGCAG	1 cut(s)	1429
BspPI	GGATC	2 cut(s)	1498, 1827
BspQI	GCTCTTC	1 cut(s)	995
BspT104I	TTCGAA	1 cut(s)	1842
BsrDI	GCAATG	1 cut(s)	1762
BsrFI	RCCGGY	1 cut(s)	633
BsrI	ACTGG	1 cut(s)	1877
BssAI	RCCGGY	1 cut(s)	633
BssECI	CCNNGG	4 cut(s)	225, 1008, 1096, 1303
BssMI	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
BssT1I	CCWWGG	4 cut(s)	225, 1008, 1096, 1303
Bst2UI	CCWGG	1 cut(s)	1473
Bst4CI	ACNGT	5 cut(s)	19, 574, 655, 1716, 1763
Bst6I	CTCTTC	2 cut(s)	995, 1215
BstAPI	GCANNNNNTGC	1 cut(s)	566
BstBI	TTCGAA	1 cut(s)	1842
BstC8I	GCNNGC	4 cut(s)	391, 438, 1608, 1683
BstDEI	CTNAG	9 cut(s)	65, 549, 638, 812, 1049, 1286, 1405, 1788, 1797
BstDSI	CCRYGG	3 cut(s)	1008, 1096, 1303
BstF5I	GGATG	3 cut(s)	316, 945, 1187
BstFNI	CGCG	1 cut(s)	526
BstHHI	GCGC	2 cut(s)	436, 526
BstKTI	GATC	8 cut(s)	193, 598, 1195, 1264, 1446, 1506, 1776, 1822
BstMAI	GTCTC	2 cut(s)	206, 1518
BstMBI	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
BstMWI	GCNNNNNNNGC	3 cut(s)	35, 566, 991
BstNI	CCWGG	1 cut(s)	1473
BstNSI	RCATGY	2 cut(s)	434, 1092
BstSCI	CCNGG	2 cut(s)	1026, 1471
BstSFI	CTRYAG	2 cut(s)	1425, 1555
BstUI	CGCG	1 cut(s)	526
BstV1I	GCAGC	3 cut(s)	553, 1387, 1411
BstV2I	GAAGAC	1 cut(s)	178
BstX2I	RGATCY	1 cut(s)	1503
BstYI	RGATCY	1 cut(s)	1503
Bsu36I	CCTNAGG	2 cut(s)	1049, 1405
BsuI	GTATCC	1 cut(s)	643
BsuRI	GGCC	4 cut(s)	162, 751, 1047, 1054
BtgI	CCRYGG	3 cut(s)	1008, 1096, 1303
BtgZI	GCGATG	1 cut(s)	683
BtsCI	GGATG	3 cut(s)	316, 945, 1187
BtsI	GCAGTG	1 cut(s)	267
BtsIMutI	CAGTG	2 cut(s)	24, 267
Cac8I	GCNNGC	4 cut(s)	391, 438, 1608, 1683
CaiI	CAGNNNCTG	1 cut(s)	566
CfoI	GCGC	2 cut(s)	436, 526
Cfr10I	RCCGGY	1 cut(s)	633
CseI	GACGC	1 cut(s)	515
Csp6I	GTAC	3 cut(s)	428, 960, 1719
CspCI	CAANNNNNGTGG	1 cut(s)	35
CviQI	GTAC	3 cut(s)	428, 960, 1719
DdeI	CTNAG	9 cut(s)	65, 549, 638, 812, 1049, 1286, 1405, 1788, 1797
DpnI	GATC	8 cut(s)	192, 597, 1194, 1263, 1445, 1505, 1775, 1821
DpnII	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
DrdI	GACNNNNNNGTC	1 cut(s)	365
DriI	GACNNNNNGTC	1 cut(s)	1146
DseDI	GACNNNNNNGTC	1 cut(s)	365
EaeI	YGGCCR	1 cut(s)	160
Eam1104I	CTCTTC	2 cut(s)	995, 1215
Eam1105I	GACNNNNNGTC	1 cut(s)	1146
EarI	CTCTTC	2 cut(s)	995, 1215
Ecl136II	GAGCTC	1 cut(s)	811
Eco130I	CCWWGG	4 cut(s)	225, 1008, 1096, 1303
Eco147I	AGGCCT	2 cut(s)	751, 1047
Eco24I	GRGCYC	2 cut(s)	813, 1660
Eco53kI	GAGCTC	1 cut(s)	811
Eco81I	CCTNAGG	2 cut(s)	1049, 1405
EcoICRI	GAGCTC	1 cut(s)	811
EcoRII	CCWGG	1 cut(s)	1471
EcoT14I	CCWWGG	4 cut(s)	225, 1008, 1096, 1303
EcoT22I	ATGCAT	2 cut(s)	1090, 1187
EcoT38I	GRGCYC	2 cut(s)	813, 1660
ErhI	CCWWGG	4 cut(s)	225, 1008, 1096, 1303
Esp3I	CGTCTC	1 cut(s)	206
FaqI	GGGAC	1 cut(s)	1291
FauI	CCCGC	2 cut(s)	51, 386
FauNDI	CATATG	1 cut(s)	1688
FbaI	TGATCA	3 cut(s)	595, 1443, 1773
Fnu4HI	GCNGC	3 cut(s)	567, 1401, 1425
FokI	GGATG	3 cut(s)	323, 952, 1194
FriOI	GRGCYC	2 cut(s)	813, 1660
Fsp4HI	GCNGC	3 cut(s)	567, 1401, 1425
FspBI	CTAG	4 cut(s)	26, 605, 1143, 1199
FspI	TGCGCA	1 cut(s)	435
GlaI	GCGC	2 cut(s)	435, 525
GluI	GCNGC	3 cut(s)	567, 1401, 1425
GsaI	CCCAGC	1 cut(s)	38
HaeIII	GGCC	4 cut(s)	162, 751, 1047, 1054
HapII	CCGG	4 cut(s)	82, 356, 634, 1027
HgaI	GACGC	1 cut(s)	515
HhaI	GCGC	2 cut(s)	436, 526
Hin6I	GCGC	2 cut(s)	434, 524
HinP1I	GCGC	2 cut(s)	434, 524
HindIII	AAGCTT	2 cut(s)	387, 446
HinfI	GANTC	3 cut(s)	127, 463, 1364
HpaII	CCGG	4 cut(s)	82, 356, 634, 1027
HphI	GGTGA	5 cut(s)	349, 521, 586, 917, 1877
Hpy166II	GTNNAC	2 cut(s)	1495, 1719
Hpy188I	TCNGA	7 cut(s)	68, 126, 155, 236, 550, 815, 882
Hpy188III	TCNNGA	4 cut(s)	356, 640, 1209, 1368
Hpy8I	GTNNAC	2 cut(s)	1495, 1719
Hpy99I	CGWCG	2 cut(s)	240, 574
HpyAV	CCTTC	2 cut(s)	640, 1589
HpyCH4III	ACNGT	5 cut(s)	19, 574, 655, 1716, 1763
HpyCH4IV	ACGT	1 cut(s)	1373
HpyF10VI	GCNNNNNNNGC	3 cut(s)	35, 566, 991
HpyF3I	CTNAG	9 cut(s)	65, 549, 638, 812, 1049, 1286, 1405, 1788, 1797
HpySE526I	ACGT	1 cut(s)	1373
HspAI	GCGC	2 cut(s)	434, 524
Kpn2I	TCCGGA	1 cut(s)	355
Ksp22I	TGATCA	3 cut(s)	595, 1443, 1773
Kzo9I	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
LguI	GCTCTTC	1 cut(s)	995
LmnI	GCTCC	4 cut(s)	800, 808, 1468, 1570
Lsp1109I	GCAGC	3 cut(s)	553, 1387, 1411
LweI	GCATC	5 cut(s)	301, 547, 720, 1172, 1348
MaeI	CTAG	4 cut(s)	26, 605, 1143, 1199
MaeII	ACGT	1 cut(s)	1373
MaeIII	GTNAC	5 cut(s)	102, 760, 1148, 1352, 1763
MalI	GATC	8 cut(s)	192, 597, 1194, 1263, 1445, 1505, 1775, 1821
MboI	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
MboII	GAAGA	9 cut(s)	178, 185, 188, 655, 828, 853, 1012, 1187, 1232
MflI	RGATCY	1 cut(s)	1503
MhlI	GDGCHC	4 cut(s)	813, 880, 1007, 1660
MluCI	AATT	9 cut(s)	49, 315, 849, 859, 967, 1155, 1316, 1348, 1741
MmeI	TCCRAC	3 cut(s)	259, 917, 1545
Mph1103I	ATGCAT	2 cut(s)	1090, 1187
MroI	TCCGGA	1 cut(s)	355
MseI	TTAA	4 cut(s)	687, 885, 1074, 1727
MslI	CAYNNNNRTG	1 cut(s)	377
MspI	CCGG	4 cut(s)	82, 356, 634, 1027
MspR9I	CCNGG	2 cut(s)	1028, 1473
Mva1269I	GAATGC	4 cut(s)	38, 860, 996, 1090
MvaI	CCWGG	1 cut(s)	1473
MvnI	CGCG	1 cut(s)	526
MwoI	GCNNNNNNNGC	3 cut(s)	35, 566, 991
NciI	CCSGG	1 cut(s)	1028
NcoI	CCATGG	3 cut(s)	1008, 1096, 1303
NdeI	CATATG	1 cut(s)	1688
NdeII	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
NlaIV	GGNNCC	2 cut(s)	1470, 1832
NmuCI	GTSAC	2 cut(s)	1148, 1763
NsbI	TGCGCA	1 cut(s)	435
NsiI	ATGCAT	2 cut(s)	1090, 1187
NspI	RCATGY	2 cut(s)	434, 1092
NspV	TTCGAA	1 cut(s)	1842
OliI	CACNNNNGTG	1 cut(s)	377
PceI	AGGCCT	2 cut(s)	751, 1047
PciSI	GCTCTTC	1 cut(s)	995
PctI	GAATGC	4 cut(s)	38, 860, 996, 1090
PfeI	GAWTC	3 cut(s)	127, 463, 1364
PfoI	TCCNGGA	1 cut(s)	1026
PkrI	GCNGC	3 cut(s)	568, 1402, 1426
PshBI	ATTAAT	1 cut(s)	885
Psp124BI	GAGCTC	1 cut(s)	813
Psp6I	CCWGG	1 cut(s)	1471
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	1 cut(s)	1471
PspN4I	GGNNCC	2 cut(s)	1470, 1832
PstI	CTGCAG	1 cut(s)	1429
PstNI	CAGNNNCTG	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	1503
RsaI	GTAC	3 cut(s)	429, 961, 1720
RsaNI	GTAC	3 cut(s)	428, 960, 1719
RseI	CAYNNNNRTG	1 cut(s)	377
SacI	GAGCTC	1 cut(s)	813
SapI	GCTCTTC	1 cut(s)	995
SaqAI	TTAA	4 cut(s)	687, 885, 1074, 1727
SatI	GCNGC	3 cut(s)	567, 1401, 1425
Sau3AI	GATC	8 cut(s)	190, 595, 1192, 1261, 1443, 1503, 1773, 1819
ScrFI	CCNGG	2 cut(s)	1028, 1473
SduI	GDGCHC	4 cut(s)	813, 880, 1007, 1660
SfaNI	GCATC	5 cut(s)	301, 547, 720, 1172, 1348
SfcI	CTRYAG	2 cut(s)	1425, 1555
SfuI	TTCGAA	1 cut(s)	1842
SmiMI	CAYNNNNRTG	1 cut(s)	377
SmlI	CTYRAG	1 cut(s)	449
SmoI	CTYRAG	1 cut(s)	449
SpeI	ACTAGT	2 cut(s)	604, 1142
Sse9I	AATT	9 cut(s)	49, 315, 849, 859, 967, 1155, 1316, 1348, 1741
SseBI	AGGCCT	2 cut(s)	751, 1047
SsiI	CCGC	5 cut(s)	44, 393, 507, 920, 1101
SspMI	CTAG	4 cut(s)	26, 605, 1143, 1199
SstI	GAGCTC	1 cut(s)	813
StuI	AGGCCT	2 cut(s)	751, 1047
StyD4I	CCNGG	2 cut(s)	1026, 1471
StyI	CCWWGG	4 cut(s)	225, 1008, 1096, 1303
TaaI	ACNGT	5 cut(s)	19, 574, 655, 1716, 1763
TaiI	ACGT	1 cut(s)	1376
TaqI	TCGA	7 cut(s)	189, 213, 461, 896, 1314, 1769, 1842
TaqII	GACCGA	1 cut(s)	456
TasI	AATT	9 cut(s)	49, 315, 849, 859, 967, 1155, 1316, 1348, 1741
TatI	WGTACW	1 cut(s)	427
TfiI	GAWTC	3 cut(s)	127, 463, 1364
Tru1I	TTAA	4 cut(s)	687, 885, 1074, 1727
Tru9I	TTAA	4 cut(s)	687, 885, 1074, 1727
TscAI	CASTG	2 cut(s)	24, 274
TseFI	GTSAC	2 cut(s)	1148, 1763
TseI	GCWGC	3 cut(s)	566, 1400, 1424
Tsp45I	GTSAC	2 cut(s)	1148, 1763
TspDTI	ATGAA	8 cut(s)	169, 555, 716, 771, 956, 1225, 1262, 1653
TspGWI	ACGGA	1 cut(s)	1710
TspRI	CASTG	2 cut(s)	24, 274
VspI	ATTAAT	1 cut(s)	885
XapI	RAATTY	2 cut(s)	49, 1741
XceI	RCATGY	2 cut(s)	434, 1092
XspI	CTAG	4 cut(s)	26, 605, 1143, 1199
Zsp2I	ATGCAT	2 cut(s)	1090, 1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.