Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59200 |
| fragaria_vesca | FvH4_2g17580 |
| malus_domestica | MD10G1149200.v1.1 MD10G1149700.v1.1 |
| prunus_persica | Prupe.8G188000_v2.0.a1 |
| pyrus_communis | pycom10g12880 pycom10g12910 |
| rosa_chinensis | RchiOBHm_Chr6g0282521 |
| rosa_laevigata | RLG00000012888 |
| rosa_multiflora | Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029 |
| rosa_rugosa | Rorug06G0147100 Rorug06G0147200 |
| rosa_samantha | Rh6CG262700 Rh6DG254600 |
| rosa_wichuraiana | Rw6G022520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 152 |
| AccII | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| AciI | CCGC | 3 cut(s) | 21, 45, 81 |
| AclI | AACGTT | 1 cut(s) | 76 |
| AfaI | GTAC | 4 cut(s) | 19, 26, 43, 50 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AseI | ATTAAT | 1 cut(s) | 138 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 25, 58 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BfaI | CTAG | 1 cut(s) | 193 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BmrI | ACTGGG | 1 cut(s) | 177 |
| BmuI | ACTGGG | 1 cut(s) | 177 |
| BsaAI | YACGTR | 1 cut(s) | 17 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse1I | ACTGG | 1 cut(s) | 183 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseNI | ACTGG | 1 cut(s) | 183 |
| Bsh1236I | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BspACI | CCGC | 3 cut(s) | 21, 45, 81 |
| BspFNI | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| BsrI | ACTGG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| BstBAI | YACGTR | 1 cut(s) | 17 |
| BstFNI | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstSNI | TACGTA | 1 cut(s) | 17 |
| BstUI | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Csp6I | GTAC | 4 cut(s) | 18, 25, 42, 49 |
| CviJI | RGCY | 1 cut(s) | 176 |
| CviKI_1 | RGCY | 1 cut(s) | 176 |
| CviQI | GTAC | 4 cut(s) | 18, 25, 42, 49 |
| Eco105I | TACGTA | 1 cut(s) | 17 |
| FaiI | YATR | 3 cut(s) | 14, 133, 166 |
| FspBI | CTAG | 1 cut(s) | 193 |
| GlaI | GCGC | 1 cut(s) | 103 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 1 cut(s) | 121 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 2 cut(s) | 16, 76 |
| HpyCH4V | TGCA | 1 cut(s) | 143 |
| HpySE526I | ACGT | 2 cut(s) | 16, 76 |
| HspAI | GCGC | 1 cut(s) | 102 |
| LpnPI | CCDG | 2 cut(s) | 50, 74 |
| MaeI | CTAG | 1 cut(s) | 193 |
| MaeII | ACGT | 2 cut(s) | 16, 76 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MseI | TTAA | 1 cut(s) | 138 |
| MvnI | CGCG | 5 cut(s) | 23, 47, 60, 83, 102 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 152 |
| Ppu21I | YACGTR | 1 cut(s) | 17 |
| PshBI | ATTAAT | 1 cut(s) | 138 |
| Psp1406I | AACGTT | 1 cut(s) | 76 |
| RsaI | GTAC | 4 cut(s) | 19, 26, 43, 50 |
| RsaNI | GTAC | 4 cut(s) | 18, 25, 42, 49 |
| SaqAI | TTAA | 1 cut(s) | 138 |
| SetI | ASST | 3 cut(s) | 19, 79, 93 |
| SgeI | CNNG | 8 cut(s) | 34, 49, 58, 64, 71, 94, 101, 113 |
| SnaBI | TACGTA | 1 cut(s) | 17 |
| SsiI | CCGC | 3 cut(s) | 21, 45, 81 |
| SspMI | CTAG | 1 cut(s) | 193 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaiI | ACGT | 2 cut(s) | 19, 79 |
| TaqI | TCGA | 1 cut(s) | 71 |
| Tru1I | TTAA | 1 cut(s) | 138 |
| Tru9I | TTAA | 1 cut(s) | 138 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| TspGWI | ACGGA | 1 cut(s) | 55 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 152 |
| VspI | ATTAAT | 1 cut(s) | 138 |
| XspI | CTAG | 1 cut(s) | 193 |