Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0013120

Physical Location & Seq

Genomic Coordinates Forward (+)

44513596 .. 44515485

Gene Structure 1890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G022520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAGTTGCTCAACCACGGTGGCTATAGGGAACTCAGTATTCCCGCCAAATTCAAACTCAAAACCCAGAAATTCCCAAAATCGGAGAGAAGTCATCTCCCTGTTGCAGAAATGCAAACACTATCAGATCCCACAAATACATGCTAAAATAATAAGAAATGGCCAGGACCAAGACCCATTCGTCGTCTTCGAGCTTCTTCGTCTCTGCTCCAACCTCAACTCCATTGACTATGCCTCCAAGGTTTTCCGACGCACCCAATCCCCAAACGTGTATCTCTATACTGCTCTCATTGACGGGTTTGTGTCGTCTGGCTATTACCTAGATGGGATTCGTCTTTACTGTCAGATGGTCAATGAGTTTATATTTCCGGACAAATATGCCATCACTTCTGTGTTGAAAGCTTGTGGCTTTGGGTTGGCTTTGGAGGAGGGCAGAGAAGTCCATGCCCAGGCTTTGAAGCTTGGGTTGTCCTCGAATAGATCAATAAGGATGAAGCTGATGGGTCGTTATGGGAAGTGTGGTGAATTTGAAAGTGCACGCCAGGTGTTTGATGAAATGCCTGAAGAAGATGCAGTTGCGGCAACCGTCATGATAACTTGTTATGCTGAGTATGGACTAGTTGAGGAGGCGAGTGGTGTTTTTGACGGGCTCAGGGAAAAGGATACGGTTTGCTGGACTGCGATGATTGATGGGTTGGTTAAGAATGGGGAGATGAATAGGGCTTTGGAGGTGTTTAGGGATATGCAGAGGAAGAATGTGAGGCCTAATGAAGTTACATTGGTTTGTGTTATGTCTGCTTGTTCGCATTTGGGAGCTTTGGAGCTCGGACGATGGGTTTGCTCGTATATAGATAAGAATAACATTGAATGCAATTACATTGTGGGTGGTGCTCTGATTAATATGTATTCAAGGTGTGGTGATATTGATGGGGCAGTAGAGGTGTTTAGCAGGATGAAAAAGAGAGATGTCAGTACGTATAATTCCATGATTGAGGGGCTTGCTATGCATGGGAAGAGCACCATGGCTATTGAAATGTTCCGGGAAATGATGAAACAAGGACTTAAACCAAATAGCATTACTTTTGTTAAGGTATTAAATGCATGTAGCCATGGGGGTTTGGTGGAGTTGGGGTTTGAGATATTTCATTCCATGACTAATAGTCACGGCATTCAACCGCAAATAGAACACTATGGATGCATGGTTGATCTTCTAGCTCGTTCAGGACGGATTGAAGAGGCGTACAGTTTCATTGAAAGAATGAAAATGGCACCAGATCATATCATGTTGGGGGCTTTGCTAAGTGCTTGTAAAATCCACCGAAACCTCGAATTAGGAGAAAGGGTGGCCGAAATGTTGGTAAACTGTGATGATGCAGATTCAGGGACTTTCGTTTTGCTGTCAAATGTGTATGCTGCATCAGGGAAGTGGAAAGAGGCTGCACGAGTCAGAGCTTTGACCAAGGAAGCTGGAACTCCAAAGGAGCCTGGTTGTAGTTTAATTGAAGTGAACAATGAGATCCATGAGTTCCTTTTGGGAGACATTAGACACCCACAGAAAGAAAATATCTACAGAAAGTTAGAGGAGCTAAACCCTGTGTTAAAAAGGGAAGGATACTCACCGGCGACAGAGGTAGTTTTGCATGACATTGAGGATAGGCAAAAGGAATGGGCTCTAGCAATACATAGTGAGAGGCTTGCCATATGCTACGGACTAATCTCTACTAAACCGTGTACCACTTTAAGGATTGTGAAAAATTTGAGGGTTTGCAATGACTGCCACTCAATGATCAAGTTGATAGCTAAGATTACTAAGAGAAAGATAATAATGAGGGATCGCCATAGGTTCCATCATTTCGAGAATGGAGCTTGTTCTTGTGGTGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

629

Amino Acids

70.99

Weight (kDa)

7.73

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	88 - 135	5e-07	PPR repeat family
PPR_2	PF13041	220 - 268	3.7e-14	PPR repeat family
PPR	PF01535	223 - 253	1.9e-08	PPR repeat
PPR_2	PF13041	321 - 369	5.1e-13	PPR repeat family
PPR_3	PF13812	321 - 368	9e-08	Pentatricopeptide repeat domain
PPR	PF01535	324 - 354	2.9e-07	PPR repeat
E_motif	PF20431	439 - 501	4.4e-18	E motif
DYW_deaminase	PF14432	537 - 629	4e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59200
fragaria_vesca	FvH4_2g17580
malus_domestica	MD10G1149200.v1.1 MD10G1149700.v1.1
prunus_persica	Prupe.8G188000_v2.0.a1
pyrus_communis	pycom10g12880 pycom10g12910
rosa_chinensis	RchiOBHm_Chr6g0282521
rosa_laevigata	RLG00000012888
rosa_multiflora	Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029
rosa_rugosa	Rorug06G0147100 Rorug06G0147200
rosa_samantha	Rh6CG262700 Rh6DG254600
rosa_wichuraiana	Rw6G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	179
AccB1I	GGYRCC	1 cut(s)	1267
AccIII	TCCGGA	1 cut(s)	367
AciI	CCGC	3 cut(s)	44, 578, 1175
AclWI	GGATC	3 cut(s)	121, 1510, 1839
AcoI	YGGCCR	2 cut(s)	160, 1344
AcsI	RAATTY	4 cut(s)	49, 70, 524, 1753
AcuI	CTGAAG	1 cut(s)	582
AfaI	GTAC	3 cut(s)	973, 1241, 1732
AfiI	CCNNNNNNNGG	3 cut(s)	81, 448, 1740
AflIII	ACRYGT	1 cut(s)	267
AhdI	GACNNNNNGTC	1 cut(s)	1158
AhlI	ACTAGT	1 cut(s)	616
AjnI	CCWGG	4 cut(s)	162, 447, 540, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	707, 739
AleI	CACNNNNGTG	1 cut(s)	389
Alw21I	GWGCWC	4 cut(s)	538, 825, 892, 1019
Alw26I	GTCTC	2 cut(s)	206, 1530
Alw44I	GTGCAC	1 cut(s)	534
AlwI	GGATC	3 cut(s)	121, 1510, 1839
Aor13HI	TCCGGA	1 cut(s)	367
AoxI	GGCC	3 cut(s)	160, 761, 1344
ApaLI	GTGCAC	1 cut(s)	534
ApeKI	GCWGC	2 cut(s)	1412, 1436
ApoI	RAATTY	4 cut(s)	49, 70, 524, 1753
ArsI	GACNNNNNNTTYG	4 cut(s)	819, 851, 1375, 1407
AseI	ATTAAT	1 cut(s)	897
AspS9I	GGNCC	1 cut(s)	166
AsuC2I	CCSGG	1 cut(s)	1040
AsuHPI	GGTGA	4 cut(s)	533, 929, 1608, 1889
AvaII	GGWCC	1 cut(s)	166
BaeGI	GKGCMC	1 cut(s)	538
BalI	TGGCCA	1 cut(s)	162
BanI	GGYRCC	1 cut(s)	1267
BanII	GRGCYC	3 cut(s)	651, 825, 1672
BauI	CACGAG	1 cut(s)	1440
BbsI	GAAGAC	1 cut(s)	178
Bbv12I	GWGCWC	4 cut(s)	538, 825, 892, 1019
BbvI	GCAGC	2 cut(s)	1399, 1423
BccI	CCATC	8 cut(s)	317, 340, 389, 493, 683, 825, 920, 1854
BceAI	ACGGC	1 cut(s)	1180
BcgI	CGANNNNNNTGC	2 cut(s)	819, 853
BciT130I	CCWGG	4 cut(s)	164, 449, 542, 1485
BciVI	GTATCC	2 cut(s)	655, 1604
BclI	TGATCA	1 cut(s)	1785
BcnI	CCSGG	1 cut(s)	1040
BcoDI	GTCTC	2 cut(s)	206, 1530
BcuI	ACTAGT	1 cut(s)	616
BfaI	CTAG	4 cut(s)	320, 617, 1211, 1673
BfmI	CTRYAG	2 cut(s)	24, 1567
BfuI	GTATCC	2 cut(s)	655, 1604
BisI	GCNGC	3 cut(s)	579, 1413, 1437
BlsI	GCNGC	3 cut(s)	580, 1414, 1438
Bme1390I	CCNGG	5 cut(s)	164, 449, 542, 1040, 1485
Bme18I	GGWCC	1 cut(s)	166
BmeRI	GACNNNNNGTC	1 cut(s)	1158
BmgT120I	GGNCC	1 cut(s)	166
BmiI	GGNNCC	3 cut(s)	1269, 1482, 1844
BmrFI	CCNGG	5 cut(s)	164, 449, 542, 1040, 1485
BmsI	GCATC	4 cut(s)	559, 1184, 1360, 1424
BpiI	GAAGAC	1 cut(s)	178
Bpu10I	CCTNAGC	1 cut(s)	650
BpuMI	CCSGG	1 cut(s)	1040
BsaAI	YACGTR	1 cut(s)	975
BsaJI	CCNNGG	6 cut(s)	15, 237, 447, 1020, 1108, 1458
BsaWI	WCCGGW	1 cut(s)	367
BsaXI	ACNNNNNCTCC	8 cut(s)	203, 218, 233, 248, 1115, 1145, 1326, 1356
Bsc4I	CCNNNNNNNGG	3 cut(s)	81, 448, 1740
Bse118I	RCCGGY	1 cut(s)	1618
Bse1I	ACTGG	1 cut(s)	1889
Bse3DI	GCAATG	1 cut(s)	1774
BseAI	TCCGGA	1 cut(s)	367
BseBI	CCWGG	4 cut(s)	164, 449, 542, 1485
BseDI	CCNNGG	6 cut(s)	15, 237, 447, 1020, 1108, 1458
BseGI	GGATG	3 cut(s)	495, 957, 1199
BseLI	CCNNNNNNNGG	3 cut(s)	81, 448, 1740
BseMI	GCAATG	1 cut(s)	1774
BseMII	CTCAG	3 cut(s)	48, 597, 664
BseNI	ACTGG	1 cut(s)	1889
BseRI	GAGGAG	3 cut(s)	440, 638, 1595
BseSI	GKGCMC	1 cut(s)	538
BseXI	GCAGC	2 cut(s)	1399, 1423
BsgI	GTGCAG	1 cut(s)	1422
BshFI	GGCC	3 cut(s)	162, 763, 1346
BshNI	GGYRCC	1 cut(s)	1267
BsiHKAI	GWGCWC	4 cut(s)	538, 825, 892, 1019
BsiSI	CCGG	3 cut(s)	368, 1039, 1619
BslFI	GGGAC	1 cut(s)	1396
BslI	CCNNNNNNNGG	3 cut(s)	81, 448, 1740
BsmAI	GTCTC	2 cut(s)	206, 1530
BsmBI	CGTCTC	1 cut(s)	206
BsmFI	GGGAC	1 cut(s)	1396
BsmI	GAATGC	2 cut(s)	872, 1167
BsnI	GGCC	3 cut(s)	162, 763, 1346
Bsp1286I	GDGCHC	6 cut(s)	538, 651, 825, 892, 1019, 1672
Bsp13I	TCCGGA	1 cut(s)	367
Bsp143I	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
Bsp19I	CCATGG	2 cut(s)	1020, 1108
BspACI	CCGC	3 cut(s)	44, 578, 1175
BspANI	GGCC	3 cut(s)	162, 763, 1346
BspCNI	CTCAG	3 cut(s)	47, 598, 663
BspEI	TCCGGA	1 cut(s)	367
BspHI	TCATGA	1 cut(s)	588
BspLI	GGNNCC	3 cut(s)	1269, 1482, 1844
BspPI	GGATC	3 cut(s)	121, 1510, 1839
BspQI	GCTCTTC	1 cut(s)	1007
BspT107I	GGYRCC	1 cut(s)	1267
BsrDI	GCAATG	1 cut(s)	1774
BsrFI	RCCGGY	1 cut(s)	1618
BsrI	ACTGG	1 cut(s)	1889
BssAI	RCCGGY	1 cut(s)	1618
BssECI	CCNNGG	6 cut(s)	15, 237, 447, 1020, 1108, 1458
BssMI	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
BssSI	CACGAG	1 cut(s)	1440
BssT1I	CCWWGG	4 cut(s)	237, 1020, 1108, 1458
Bst2BI	CACGAG	1 cut(s)	1440
Bst2UI	CCWGG	4 cut(s)	164, 449, 542, 1485
Bst4CI	ACNGT	7 cut(s)	19, 341, 586, 667, 1244, 1364, 1728
Bst6I	CTCTTC	2 cut(s)	1007, 1227
BstAPI	GCANNNNNTGC	1 cut(s)	1773
BstBAI	YACGTR	1 cut(s)	975
BstC8I	GCNNGC	3 cut(s)	538, 999, 1695
BstDEI	CTNAG	6 cut(s)	34, 606, 650, 1298, 1800, 1809
BstDSI	CCRYGG	3 cut(s)	15, 1020, 1108
BstF5I	GGATG	3 cut(s)	495, 957, 1199
BstKTI	GATC	7 cut(s)	129, 482, 1207, 1276, 1518, 1788, 1834
BstMAI	GTCTC	2 cut(s)	206, 1530
BstMBI	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
BstMWI	GCNNNNNNNGC	3 cut(s)	578, 1003, 1773
BstNI	CCWGG	4 cut(s)	164, 449, 542, 1485
BstNSI	RCATGY	2 cut(s)	143, 1104
BstSCI	CCNGG	5 cut(s)	162, 447, 540, 1038, 1483
BstSFI	CTRYAG	2 cut(s)	24, 1567
BstSLI	GKGCMC	1 cut(s)	538
BstSNI	TACGTA	1 cut(s)	975
BstV1I	GCAGC	2 cut(s)	1399, 1423
BstV2I	GAAGAC	1 cut(s)	178
BstX2I	RGATCY	2 cut(s)	126, 1515
BstYI	RGATCY	2 cut(s)	126, 1515
BsuI	GTATCC	2 cut(s)	655, 1604
BsuRI	GGCC	3 cut(s)	162, 763, 1346
BtgI	CCRYGG	3 cut(s)	15, 1020, 1108
BtgZI	GCGATG	1 cut(s)	695
BtsCI	GGATG	3 cut(s)	495, 957, 1199
Cac8I	GCNNGC	3 cut(s)	538, 999, 1695
CciI	TCATGA	1 cut(s)	588
Cfr10I	RCCGGY	1 cut(s)	1618
Cfr13I	GGNCC	1 cut(s)	166
CseI	GACGC	1 cut(s)	258
Csp6I	GTAC	3 cut(s)	972, 1240, 1731
CspCI	CAANNNNNGTGG	1 cut(s)	35
CviQI	GTAC	3 cut(s)	972, 1240, 1731
DdeI	CTNAG	6 cut(s)	34, 606, 650, 1298, 1800, 1809
DpnI	GATC	7 cut(s)	128, 481, 1206, 1275, 1517, 1787, 1833
DpnII	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
DrdI	GACNNNNNNGTC	1 cut(s)	179
DriI	GACNNNNNGTC	1 cut(s)	1158
DseDI	GACNNNNNNGTC	1 cut(s)	179
EaeI	YGGCCR	2 cut(s)	160, 1344
Eam1104I	CTCTTC	2 cut(s)	1007, 1227
Eam1105I	GACNNNNNGTC	1 cut(s)	1158
EarI	CTCTTC	2 cut(s)	1007, 1227
Ecl136II	GAGCTC	1 cut(s)	823
Eco105I	TACGTA	1 cut(s)	975
Eco130I	CCWWGG	4 cut(s)	237, 1020, 1108, 1458
Eco147I	AGGCCT	1 cut(s)	763
Eco24I	GRGCYC	3 cut(s)	651, 825, 1672
Eco47I	GGWCC	1 cut(s)	166
Eco53kI	GAGCTC	1 cut(s)	823
Eco57I	CTGAAG	1 cut(s)	582
EcoICRI	GAGCTC	1 cut(s)	823
EcoRII	CCWGG	4 cut(s)	162, 447, 540, 1483
EcoT14I	CCWWGG	4 cut(s)	237, 1020, 1108, 1458
EcoT22I	ATGCAT	3 cut(s)	1008, 1102, 1199
EcoT38I	GRGCYC	3 cut(s)	651, 825, 1672
ErhI	CCWWGG	4 cut(s)	237, 1020, 1108, 1458
Esp3I	CGTCTC	1 cut(s)	206
FaqI	GGGAC	1 cut(s)	1396
FauI	CCCGC	1 cut(s)	51
FauNDI	CATATG	1 cut(s)	1700
FbaI	TGATCA	1 cut(s)	1785
Fnu4HI	GCNGC	3 cut(s)	579, 1413, 1437
FokI	GGATG	3 cut(s)	502, 964, 1206
FriOI	GRGCYC	3 cut(s)	651, 825, 1672
Fsp4HI	GCNGC	3 cut(s)	579, 1413, 1437
FspBI	CTAG	4 cut(s)	320, 617, 1211, 1673
GluI	GCNGC	3 cut(s)	579, 1413, 1437
HaeIII	GGCC	3 cut(s)	162, 763, 1346
HapII	CCGG	3 cut(s)	368, 1039, 1619
HgaI	GACGC	1 cut(s)	258
HindIII	AAGCTT	2 cut(s)	399, 458
HinfI	GANTC	3 cut(s)	328, 1376, 1443
HpaII	CCGG	3 cut(s)	368, 1039, 1619
HphI	GGTGA	4 cut(s)	533, 929, 1608, 1889
Hpy166II	GTNNAC	4 cut(s)	536, 1360, 1507, 1731
Hpy188I	TCNGA	7 cut(s)	84, 126, 248, 345, 827, 894, 1448
Hpy188III	TCNNGA	4 cut(s)	368, 589, 1221, 1855
Hpy8I	GTNNAC	4 cut(s)	536, 1360, 1507, 1731
Hpy99I	CGWCG	2 cut(s)	185, 252
HpyAV	CCTTC	1 cut(s)	1601
HpyCH4III	ACNGT	7 cut(s)	19, 341, 586, 667, 1244, 1364, 1728
HpyCH4IV	ACGT	2 cut(s)	267, 974
HpyF10VI	GCNNNNNNNGC	3 cut(s)	578, 1003, 1773
HpyF3I	CTNAG	6 cut(s)	34, 606, 650, 1298, 1800, 1809
HpySE526I	ACGT	2 cut(s)	267, 974
Kpn2I	TCCGGA	1 cut(s)	367
Ksp22I	TGATCA	1 cut(s)	1785
Kzo9I	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
LguI	GCTCTTC	1 cut(s)	1007
LmnI	GCTCC	6 cut(s)	212, 812, 820, 1480, 1582, 1862
Lsp1109I	GCAGC	2 cut(s)	1399, 1423
LweI	GCATC	4 cut(s)	559, 1184, 1360, 1424
MaeI	CTAG	4 cut(s)	320, 617, 1211, 1673
MaeII	ACGT	2 cut(s)	267, 974
MaeIII	GTNAC	2 cut(s)	772, 1160
MalI	GATC	7 cut(s)	128, 481, 1206, 1275, 1517, 1787, 1833
MboI	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
MboII	GAAGA	8 cut(s)	178, 188, 575, 578, 763, 1024, 1199, 1244
MflI	RGATCY	2 cut(s)	126, 1515
MhlI	GDGCHC	6 cut(s)	538, 651, 825, 892, 1019, 1672
MlsI	TGGCCA	1 cut(s)	162
MluCI	AATT	8 cut(s)	49, 70, 524, 871, 979, 1328, 1497, 1753
MluNI	TGGCCA	1 cut(s)	162
MlyI	GAGTC	1 cut(s)	1452
MmeI	TCCRAC	2 cut(s)	234, 271
Mox20I	TGGCCA	1 cut(s)	162
Mph1103I	ATGCAT	3 cut(s)	1008, 1102, 1199
MroI	TCCGGA	1 cut(s)	367
MscI	TGGCCA	1 cut(s)	162
MseI	TTAA	8 cut(s)	699, 897, 1062, 1086, 1094, 1496, 1598, 1739
MslI	CAYNNNNRTG	1 cut(s)	389
Msp20I	TGGCCA	1 cut(s)	162
MspI	CCGG	3 cut(s)	368, 1039, 1619
MspR9I	CCNGG	5 cut(s)	164, 449, 542, 1040, 1485
Mva1269I	GAATGC	2 cut(s)	872, 1167
MvaI	CCWGG	4 cut(s)	164, 449, 542, 1485
MwoI	GCNNNNNNNGC	3 cut(s)	578, 1003, 1773
NciI	CCSGG	1 cut(s)	1040
NcoI	CCATGG	2 cut(s)	1020, 1108
NdeI	CATATG	1 cut(s)	1700
NdeII	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
NlaIV	GGNNCC	3 cut(s)	1269, 1482, 1844
NmuCI	GTSAC	1 cut(s)	1160
NsiI	ATGCAT	3 cut(s)	1008, 1102, 1199
NspI	RCATGY	2 cut(s)	143, 1104
OliI	CACNNNNGTG	1 cut(s)	389
PagI	TCATGA	1 cut(s)	588
PceI	AGGCCT	1 cut(s)	763
PciSI	GCTCTTC	1 cut(s)	1007
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	2 cut(s)	872, 1167
PfeI	GAWTC	2 cut(s)	328, 1376
PfoI	TCCNGGA	1 cut(s)	1038
PkrI	GCNGC	3 cut(s)	580, 1414, 1438
PleI	GAGTC	1 cut(s)	1451
PpsI	GAGTC	1 cut(s)	1451
Ppu21I	YACGTR	1 cut(s)	975
PshBI	ATTAAT	1 cut(s)	897
Psp124BI	GAGCTC	1 cut(s)	825
Psp6I	CCWGG	4 cut(s)	162, 447, 540, 1483
PspGI	CCWGG	4 cut(s)	162, 447, 540, 1483
PspN4I	GGNNCC	3 cut(s)	1269, 1482, 1844
PspPI	GGNCC	1 cut(s)	166
PsuI	RGATCY	2 cut(s)	126, 1515
RsaI	GTAC	3 cut(s)	973, 1241, 1732
RsaNI	GTAC	3 cut(s)	972, 1240, 1731
RseI	CAYNNNNRTG	1 cut(s)	389
SacI	GAGCTC	1 cut(s)	825
SapI	GCTCTTC	1 cut(s)	1007
SaqAI	TTAA	8 cut(s)	699, 897, 1062, 1086, 1094, 1496, 1598, 1739
SatI	GCNGC	3 cut(s)	579, 1413, 1437
Sau3AI	GATC	7 cut(s)	126, 479, 1204, 1273, 1515, 1785, 1831
Sau96I	GGNCC	1 cut(s)	166
SchI	GAGTC	1 cut(s)	1452
ScrFI	CCNGG	5 cut(s)	164, 449, 542, 1040, 1485
SduI	GDGCHC	6 cut(s)	538, 651, 825, 892, 1019, 1672
SfaNI	GCATC	4 cut(s)	559, 1184, 1360, 1424
SfcI	CTRYAG	2 cut(s)	24, 1567
SgrAI	CRCCGGYG	1 cut(s)	1618
SinI	GGWCC	1 cut(s)	166
SmiMI	CAYNNNNRTG	1 cut(s)	389
SnaBI	TACGTA	1 cut(s)	975
SpeI	ACTAGT	1 cut(s)	616
Sse9I	AATT	8 cut(s)	49, 70, 524, 871, 979, 1328, 1497, 1753
SseBI	AGGCCT	1 cut(s)	763
SsiI	CCGC	3 cut(s)	44, 578, 1175
SspMI	CTAG	4 cut(s)	320, 617, 1211, 1673
SstI	GAGCTC	1 cut(s)	825
StuI	AGGCCT	1 cut(s)	763
StyD4I	CCNGG	5 cut(s)	162, 447, 540, 1038, 1483
StyI	CCWWGG	4 cut(s)	237, 1020, 1108, 1458
TaaI	ACNGT	7 cut(s)	19, 341, 586, 667, 1244, 1364, 1728
TaiI	ACGT	2 cut(s)	270, 977
TaqI	TCGA	4 cut(s)	189, 473, 1326, 1854
TasI	AATT	8 cut(s)	49, 70, 524, 871, 979, 1328, 1497, 1753
TauI	GCSGC	1 cut(s)	581
TfiI	GAWTC	2 cut(s)	328, 1376
Tru1I	TTAA	8 cut(s)	699, 897, 1062, 1086, 1094, 1496, 1598, 1739
Tru9I	TTAA	8 cut(s)	699, 897, 1062, 1086, 1094, 1496, 1598, 1739
TseFI	GTSAC	1 cut(s)	1160
TseI	GCWGC	2 cut(s)	1412, 1436
Tsp45I	GTSAC	1 cut(s)	1160
TspDTI	ATGAA	9 cut(s)	506, 567, 728, 783, 968, 1064, 1133, 1237, 1274
TspGWI	ACGGA	2 cut(s)	1240, 1722
VneI	GTGCAC	1 cut(s)	534
VpaK11BI	GGWCC	1 cut(s)	166
VspI	ATTAAT	1 cut(s)	897
XapI	RAATTY	4 cut(s)	49, 70, 524, 1753
XceI	RCATGY	2 cut(s)	143, 1104
XspI	CTAG	4 cut(s)	320, 617, 1211, 1673
Zsp2I	ATGCAT	3 cut(s)	1008, 1102, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.