Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0013120

Physical Location & Seq

Genomic Coordinates Reverse (-)

23689021 .. 23690913

Gene Structure 1893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1149700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGAGTTACTCAGCGACAACGGTTACATTGAACTCAGCATTCCCGCGAAATTCAAATCCAAAAGCCAAGGATTCTCAAAACCGGAGAGAAACAATCTCTCTAATACAAAAATGCAAACACATTCATCAGATTCCACCAATCCACGCAAAAATCATAAGAAATTTCCAAGACCAAGACCCATTCGTCGTCTTCGAGCTTCTTCGCCTCTGCTCCAACCTCAACTCAATCGACTACGCCACCACGATTTTCCAACAAGTTCAAACCCCAAATGTCTACCTCTACACTGCTCTCATTGATGGGTTCGTGTCATCTGGGTTTTACCTCGATGCGATTCGGGTTTACTGTCGAATGGTTAACGGGTTTGTTTCGCCGGATAACTACGCGGTAACTTCTGTGTTAAAAGCTTGTGGCTTTGGGTTGGCGTTGGAGGAGGGGAGAGGAGTCCATACGCAGGTTTTGAAGCTTGGGTTGACATCGAATCGATCGGTGAGGATGAAGCTTCTGGCTCTCTATGGGAAGTGTGGTGAATTTGAGTGTGCACGGAGGGTGTTCGATGAAATGCCTGATAGGGATGTCGTTGCGTCAACGGTGATGATCACTTCTTATGCTGATTATGGGTTGATTGAGGAGGCGATTGGTGTTTTTAACCGGGCTAGGAGTAAGGATACCGTTTGTTGGACTGCTATGATCGATGGGTTGGTTAAGAATGGGGAGATGAATAGGGCTTTGGAGGCGTTTAGGGAGATGCAGAGGAATAATGTGAGGCCTAATGAAGTTACTGTTGTTTGTGTTTTATCTGCTTGTTCTTATTTGGGAGCGTTGGAGCTTGGAAGATGGGTTCACTCTTACATAGATAAGTATGACATCGAATTCAATTACATTGTAGGTGGTGCTCTGATTAATATGTACTCTAGGTGTGGCGATATTGATGAGGCACTGGCAGTGTTTGGTAAGATGAAAGAGAGAGATGTGAGTAGTTATAATTCCATGATTGAGGGGCTTGCTATGCATGGGAAGAGCATGGAGGCTATCCAAATGTTCCAGACAATGATAAAACAAGGACTAAGGCCAAATAGCATTACTTTTGTTAGAGTATTGAATGCATGTAGTCATGGAGGTTTGTCGGGTTTGGGTTTTGAGATATTTCATTCCATGACTAATATTCACGGCATTCAACCACAGATAGAACACTATGGATGCATGGTTGATCTTCTAGGTCGCTCTGGTCAGCTTGAAGAAGCTTACAATTTCATTGCAAGAATGAAAATGGCACCGGATCATATCATGGTGGGGGCTTTGCTAAGTGCTTGTAAAATCCATGGGAACCTTGAATTAGGAGAAAGGGTAGCCGAAATCTTGGTGAATTGTGGTAATGCAGATTCAGGAACTTACGTACTGCTATCAAATGTATATGCTTCATCAGGGAGGTGGAAAGAGGCTGCACAAGTGAGAGCAAAGATGAAGGAAGGTGGAACCCCAAAGGAGCCTGGTTGTAGCTTGATTGAAGTAAACAATGAGATCCATGAGTTCCTCTTGGGAGACCTCAGACACCCAAAGAGAGAGGAAATCTACAAAAAGTTAACGGAGCTAATCGATGAACTGAAATCAGAAGGATACTTGCCTGCAACAGAGGCGGTTTTGCATGATATTGAAGATACACAAAAGGAATTGGCTCTGTCGATACATAGCGAGAGGCTCGCCATATGCTACGGGCTAATTGCTACAAAACGAGGTACGACTTTGAGGATTGTAAATAACTTAAGGGTTTGCAGTGACTGCCACTCAATGATCAAATTGATAGCTAAGATCACCAACAGAAAGATTGTCGTTAGGGATCGCAATAGGTTCCACCATTTTGAGAGTGGGGTTTGTTCTTGTGCTGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

631

Amino Acids

70.62

Weight (kDa)

7.24

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	89 - 136	4.4e-07	PPR repeat family
PPR_2	PF13041	221 - 268	3.4e-13	PPR repeat family
PPR	PF01535	224 - 254	5.8e-08	PPR repeat
PPR	PF01535	298 - 324	5.3e-06	PPR repeat
PPR_long	PF17177	300 - 441	5.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	322 - 370	4.6e-11	PPR repeat family
PPR_3	PF13812	323 - 369	9.5e-06	Pentatricopeptide repeat domain
PPR	PF01535	326 - 355	3.9e-06	PPR repeat
E_motif	PF20431	440 - 502	5e-20	E motif
DYW_deaminase	PF14432	538 - 630	9.2e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59200
fragaria_vesca	FvH4_2g17580
malus_domestica	MD10G1149200.v1.1 MD10G1149700.v1.1
prunus_persica	Prupe.8G188000_v2.0.a1
pyrus_communis	pycom10g12880 pycom10g12910
rosa_chinensis	RchiOBHm_Chr6g0282521
rosa_laevigata	RLG00000012888
rosa_multiflora	Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029
rosa_rugosa	Rorug06G0147100 Rorug06G0147200
rosa_samantha	Rh6CG262700 Rh6DG254600
rosa_wichuraiana	Rw6G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	981
AasI	GACNNNNNNGTC	1 cut(s)	182
Acc36I	ACCTGC	1 cut(s)	442
AccB1I	GGYRCC	1 cut(s)	1270
AccI	GTMKAC	1 cut(s)	273
AccII	CGCG	2 cut(s)	46, 383
AciI	CCGC	3 cut(s)	44, 383, 1634
AclWI	GGATC	3 cut(s)	1284, 1513, 1842
AcsI	RAATTY	4 cut(s)	49, 160, 527, 869
AfaI	GTAC	3 cut(s)	908, 1395, 1735
AfiI	CCNNNNNNNGG	2 cut(s)	451, 675
AflII	CTTAAG	1 cut(s)	1759
AjnI	CCWGG	1 cut(s)	1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	710, 742
AloI	GAACNNNNNNTCC	2 cut(s)	822, 854
Alw21I	GWGCWC	2 cut(s)	541, 895
Alw26I	GTCTC	1 cut(s)	1533
Alw44I	GTGCAC	1 cut(s)	537
AlwI	GGATC	3 cut(s)	1284, 1513, 1842
AlwNI	CAGNNNCTG	1 cut(s)	1776
AoxI	GGCC	2 cut(s)	764, 1067
ApaLI	GTGCAC	1 cut(s)	537
ApeKI	GCWGC	1 cut(s)	1439
ApoI	RAATTY	4 cut(s)	49, 160, 527, 869
AseI	ATTAAT	1 cut(s)	900
AsuC2I	CCSGG	1 cut(s)	650
AsuHPI	GGTGA	5 cut(s)	499, 536, 601, 1372, 1801
BaeGI	GKGCMC	1 cut(s)	541
BanI	GGYRCC	1 cut(s)	1270
BbsI	GAAGAC	1 cut(s)	181
Bbv12I	GWGCWC	2 cut(s)	541, 895
BbvI	GCAGC	1 cut(s)	1426
BccI	CCATC	3 cut(s)	290, 686, 828
BceAI	ACGGC	1 cut(s)	1183
BciT130I	CCWGG	1 cut(s)	1488
BciVI	GTATCC	2 cut(s)	658, 1607
BclI	TGATCA	2 cut(s)	594, 1788
BcnI	CCSGG	1 cut(s)	650
BcoDI	GTCTC	1 cut(s)	1533
BfaI	CTAG	3 cut(s)	654, 912, 1214
BfrI	CTTAAG	1 cut(s)	1759
BfuAI	ACCTGC	1 cut(s)	442
BfuI	GTATCC	2 cut(s)	658, 1607
BisI	GCNGC	1 cut(s)	1440
BlsI	GCNGC	1 cut(s)	1441
Bme1390I	CCNGG	2 cut(s)	650, 1488
BmiI	GGNNCC	5 cut(s)	1272, 1325, 1474, 1485, 1847
BmrFI	CCNGG	2 cut(s)	650, 1488
BmsI	GCATC	3 cut(s)	316, 735, 1187
BpiI	GAAGAC	1 cut(s)	181
BpuMI	CCSGG	1 cut(s)	650
Bsa29I	ATCGAT	3 cut(s)	481, 690, 1593
BsaAI	YACGTR	1 cut(s)	1393
BsaI	GGTCTC	1 cut(s)	1533
BsaJI	CCNNGG	2 cut(s)	66, 1318
BsaWI	WCCGGW	2 cut(s)	81, 1273
BsaXI	ACNNNNNCTCC	2 cut(s)	1329, 1359
Bsc4I	CCNNNNNNNGG	2 cut(s)	451, 675
Bse1I	ACTGG	1 cut(s)	942
Bse3DI	GCAATG	1 cut(s)	1251
BseBI	CCWGG	1 cut(s)	1488
BseCI	ATCGAT	3 cut(s)	481, 690, 1593
BseDI	CCNNGG	2 cut(s)	66, 1318
BseGI	GGATG	3 cut(s)	498, 577, 1202
BseLI	CCNNNNNNNGG	2 cut(s)	451, 675
BseMI	GCAATG	1 cut(s)	1251
BseMII	CTCAG	3 cut(s)	24, 48, 1558
BseNI	ACTGG	1 cut(s)	942
BseRI	GAGGAG	3 cut(s)	443, 453, 641
BseSI	GKGCMC	1 cut(s)	541
BseXI	GCAGC	1 cut(s)	1426
BsgI	GTGCAG	1 cut(s)	1425
Bsh1236I	CGCG	2 cut(s)	46, 383
Bsh1285I	CGRYCG	1 cut(s)	485
BshFI	GGCC	2 cut(s)	766, 1069
BshNI	GGYRCC	1 cut(s)	1270
BshVI	ATCGAT	3 cut(s)	481, 690, 1593
BsiEI	CGRYCG	1 cut(s)	485
BsiHKAI	GWGCWC	2 cut(s)	541, 895
BsiSI	CCGG	4 cut(s)	82, 371, 649, 1274
BslI	CCNNNNNNNGG	2 cut(s)	451, 675
BsmAI	GTCTC	1 cut(s)	1533
BsmI	GAATGC	3 cut(s)	38, 1105, 1170
BsnI	GGCC	2 cut(s)	766, 1069
Bso31I	GGTCTC	1 cut(s)	1533
Bsp1286I	GDGCHC	2 cut(s)	541, 895
Bsp143I	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
Bsp19I	CCATGG	1 cut(s)	1318
BspACI	CCGC	3 cut(s)	44, 383, 1634
BspANI	GGCC	2 cut(s)	766, 1069
BspCNI	CTCAG	3 cut(s)	23, 47, 1557
BspDI	ATCGAT	3 cut(s)	481, 690, 1593
BspFNI	CGCG	2 cut(s)	46, 383
BspLI	GGNNCC	5 cut(s)	1272, 1325, 1474, 1485, 1847
BspMI	ACCTGC	1 cut(s)	442
BspPI	GGATC	3 cut(s)	1284, 1513, 1842
BspQI	GCTCTTC	1 cut(s)	1010
BspT107I	GGYRCC	1 cut(s)	1270
BspTI	CTTAAG	1 cut(s)	1759
BspTNI	GGTCTC	1 cut(s)	1533
BsrDI	GCAATG	1 cut(s)	1251
BsrI	ACTGG	1 cut(s)	942
BssECI	CCNNGG	2 cut(s)	66, 1318
BssMI	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
BssT1I	CCWWGG	2 cut(s)	66, 1318
Bst2UI	CCWGG	1 cut(s)	1488
Bst4CI	ACNGT	5 cut(s)	22, 344, 589, 670, 781
Bst6I	CTCTTC	1 cut(s)	1010
BstAFI	CTTAAG	1 cut(s)	1759
BstAPI	GCANNNNNTGC	1 cut(s)	1776
BstBAI	YACGTR	1 cut(s)	1393
BstC8I	GCNNGC	3 cut(s)	1002, 1623, 1698
BstDEI	CTNAG	6 cut(s)	10, 34, 1064, 1301, 1544, 1803
BstDSI	CCRYGG	1 cut(s)	1318
BstF5I	GGATG	3 cut(s)	498, 577, 1202
BstFNI	CGCG	2 cut(s)	46, 383
BstKTI	GATC	9 cut(s)	485, 597, 690, 1210, 1279, 1521, 1791, 1809, 1837
BstMAI	GTCTC	1 cut(s)	1533
BstMBI	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
BstMCI	CGRYCG	1 cut(s)	485
BstMWI	GCNNNNNNNGC	4 cut(s)	731, 1006, 1631, 1776
BstNI	CCWGG	1 cut(s)	1488
BstNSI	RCATGY	1 cut(s)	1107
BstSCI	CCNGG	2 cut(s)	648, 1486
BstSLI	GKGCMC	1 cut(s)	541
BstSNI	TACGTA	1 cut(s)	1393
BstUI	CGCG	2 cut(s)	46, 383
BstV1I	GCAGC	1 cut(s)	1426
BstV2I	GAAGAC	1 cut(s)	181
BstX2I	RGATCY	1 cut(s)	1518
BstYI	RGATCY	1 cut(s)	1518
Bsu15I	ATCGAT	3 cut(s)	481, 690, 1593
BsuI	GTATCC	2 cut(s)	658, 1607
BsuRI	GGCC	2 cut(s)	766, 1069
BsuTUI	ATCGAT	3 cut(s)	481, 690, 1593
BtgI	CCRYGG	1 cut(s)	1318
BtsCI	GGATG	3 cut(s)	498, 577, 1202
BtsI	GCAGTG	3 cut(s)	282, 948, 1777
BtsIMutI	CAGTG	4 cut(s)	282, 935, 948, 1777
BveI	ACCTGC	1 cut(s)	442
Cac8I	GCNNGC	3 cut(s)	1002, 1623, 1698
CaiI	CAGNNNCTG	1 cut(s)	1776
ClaI	ATCGAT	3 cut(s)	481, 690, 1593
CseI	GACGC	1 cut(s)	570
Csp6I	GTAC	3 cut(s)	907, 1394, 1734
CviQI	GTAC	3 cut(s)	907, 1394, 1734
DdeI	CTNAG	6 cut(s)	10, 34, 1064, 1301, 1544, 1803
DpnI	GATC	9 cut(s)	484, 596, 689, 1209, 1278, 1520, 1790, 1808, 1836
DpnII	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
DrdI	GACNNNNNNGTC	1 cut(s)	182
DseDI	GACNNNNNNGTC	1 cut(s)	182
Eam1104I	CTCTTC	1 cut(s)	1010
EarI	CTCTTC	1 cut(s)	1010
Eco105I	TACGTA	1 cut(s)	1393
Eco130I	CCWWGG	2 cut(s)	66, 1318
Eco147I	AGGCCT	1 cut(s)	766
Eco31I	GGTCTC	1 cut(s)	1533
EcoRI	GAATTC	1 cut(s)	869
EcoRII	CCWGG	1 cut(s)	1486
EcoT14I	CCWWGG	2 cut(s)	66, 1318
EcoT22I	ATGCAT	3 cut(s)	1011, 1105, 1202
ErhI	CCWWGG	2 cut(s)	66, 1318
FauI	CCCGC	1 cut(s)	51
FauNDI	CATATG	1 cut(s)	1703
FbaI	TGATCA	2 cut(s)	594, 1788
FblI	GTMKAC	1 cut(s)	273
Fnu4HI	GCNGC	1 cut(s)	1440
FokI	GGATG	3 cut(s)	505, 584, 1209
Fsp4HI	GCNGC	1 cut(s)	1440
FspBI	CTAG	3 cut(s)	654, 912, 1214
GluI	GCNGC	1 cut(s)	1440
HaeIII	GGCC	2 cut(s)	766, 1069
HapII	CCGG	4 cut(s)	82, 371, 649, 1274
HgaI	GACGC	1 cut(s)	570
HincII	GTYRAC	4 cut(s)	355, 471, 585, 1581
HindII	GTYRAC	4 cut(s)	355, 471, 585, 1581
HindIII	AAGCTT	4 cut(s)	402, 461, 497, 1239
HinfI	GANTC	6 cut(s)	71, 130, 331, 441, 478, 1379
HpaI	GTTAAC	2 cut(s)	355, 1581
HpaII	CCGG	4 cut(s)	82, 371, 649, 1274
HphI	GGTGA	5 cut(s)	499, 536, 601, 1372, 1801
Hpy166II	GTNNAC	9 cut(s)	274, 340, 355, 471, 539, 585, 841, 1510, 1581
Hpy188I	TCNGA	4 cut(s)	129, 897, 1547, 1609
Hpy188III	TCNNGA	2 cut(s)	1042, 1383
Hpy8I	GTNNAC	9 cut(s)	274, 340, 355, 471, 539, 585, 841, 1510, 1581
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	3 cut(s)	1456, 1460, 1604
HpyCH4III	ACNGT	5 cut(s)	22, 344, 589, 670, 781
HpyCH4IV	ACGT	1 cut(s)	1392
HpyF10VI	GCNNNNNNNGC	4 cut(s)	731, 1006, 1631, 1776
HpyF3I	CTNAG	6 cut(s)	10, 34, 1064, 1301, 1544, 1803
HpySE526I	ACGT	1 cut(s)	1392
Ksp22I	TGATCA	2 cut(s)	594, 1788
KspAI	GTTAAC	2 cut(s)	355, 1581
Kzo9I	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	5 cut(s)	215, 815, 823, 1483, 1585
Lsp1109I	GCAGC	1 cut(s)	1426
LweI	GCATC	3 cut(s)	316, 735, 1187
MaeI	CTAG	3 cut(s)	654, 912, 1214
MaeII	ACGT	1 cut(s)	1392
MaeIII	GTNAC	5 cut(s)	5, 22, 385, 775, 1772
MalI	GATC	9 cut(s)	484, 596, 689, 1209, 1278, 1520, 1790, 1808, 1836
MboI	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
MboII	GAAGA	7 cut(s)	181, 191, 843, 1027, 1202, 1247, 1664
MflI	RGATCY	1 cut(s)	1518
MhlI	GDGCHC	2 cut(s)	541, 895
MlyI	GAGTC	1 cut(s)	450
MmeI	TCCRAC	5 cut(s)	237, 274, 405, 656, 801
Mph1103I	ATGCAT	3 cut(s)	1011, 1105, 1202
MseI	TTAA	7 cut(s)	354, 398, 645, 702, 900, 1580, 1760
MspCI	CTTAAG	1 cut(s)	1759
MspI	CCGG	4 cut(s)	82, 371, 649, 1274
MspR9I	CCNGG	2 cut(s)	650, 1488
Mva1269I	GAATGC	3 cut(s)	38, 1105, 1170
MvaI	CCWGG	1 cut(s)	1488
MvnI	CGCG	2 cut(s)	46, 383
MwoI	GCNNNNNNNGC	4 cut(s)	731, 1006, 1631, 1776
NciI	CCSGG	1 cut(s)	650
NcoI	CCATGG	1 cut(s)	1318
NdeI	CATATG	1 cut(s)	1703
NdeII	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
NlaIV	GGNNCC	5 cut(s)	1272, 1325, 1474, 1485, 1847
NmuCI	GTSAC	1 cut(s)	1772
NsiI	ATGCAT	3 cut(s)	1011, 1105, 1202
NspI	RCATGY	1 cut(s)	1107
PceI	AGGCCT	1 cut(s)	766
PciSI	GCTCTTC	1 cut(s)	1010
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PctI	GAATGC	3 cut(s)	38, 1105, 1170
PfeI	GAWTC	5 cut(s)	71, 130, 331, 478, 1379
PkrI	GCNGC	1 cut(s)	1441
Ple19I	CGATCG	1 cut(s)	485
PleI	GAGTC	1 cut(s)	449
PpsI	GAGTC	1 cut(s)	449
Ppu21I	YACGTR	1 cut(s)	1393
PshBI	ATTAAT	1 cut(s)	900
PsiI	TTATAA	1 cut(s)	981
Psp6I	CCWGG	1 cut(s)	1486
PspGI	CCWGG	1 cut(s)	1486
PspN4I	GGNNCC	5 cut(s)	1272, 1325, 1474, 1485, 1847
PstNI	CAGNNNCTG	1 cut(s)	1776
PsuI	RGATCY	1 cut(s)	1518
PvuI	CGATCG	1 cut(s)	485
RsaI	GTAC	3 cut(s)	908, 1395, 1735
RsaNI	GTAC	3 cut(s)	907, 1394, 1734
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	7 cut(s)	354, 398, 645, 702, 900, 1580, 1760
SatI	GCNGC	1 cut(s)	1440
Sau3AI	GATC	9 cut(s)	482, 594, 687, 1207, 1276, 1518, 1788, 1806, 1834
SchI	GAGTC	1 cut(s)	450
ScrFI	CCNGG	2 cut(s)	650, 1488
SduI	GDGCHC	2 cut(s)	541, 895
SfaNI	GCATC	3 cut(s)	316, 735, 1187
SmlI	CTYRAG	1 cut(s)	1759
SmoI	CTYRAG	1 cut(s)	1759
SnaBI	TACGTA	1 cut(s)	1393
SseBI	AGGCCT	1 cut(s)	766
SsiI	CCGC	3 cut(s)	44, 383, 1634
SspI	AATATT	1 cut(s)	1162
SspMI	CTAG	3 cut(s)	654, 912, 1214
StuI	AGGCCT	1 cut(s)	766
StyD4I	CCNGG	2 cut(s)	648, 1486
StyI	CCWWGG	2 cut(s)	66, 1318
TaaI	ACNGT	5 cut(s)	22, 344, 589, 670, 781
TaiI	ACGT	1 cut(s)	1395
TatI	WGTACW	1 cut(s)	906
TfiI	GAWTC	5 cut(s)	71, 130, 331, 478, 1379
Tru1I	TTAA	7 cut(s)	354, 398, 645, 702, 900, 1580, 1760
Tru9I	TTAA	7 cut(s)	354, 398, 645, 702, 900, 1580, 1760
TscAI	CASTG	4 cut(s)	289, 942, 948, 1777
TseFI	GTSAC	1 cut(s)	1772
TseI	GCWGC	1 cut(s)	1439
Tsp45I	GTSAC	1 cut(s)	1772
TspGWI	ACGGA	2 cut(s)	556, 1598
TspRI	CASTG	4 cut(s)	289, 942, 948, 1777
Vha464I	CTTAAG	1 cut(s)	1759
VneI	GTGCAC	1 cut(s)	537
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	4 cut(s)	49, 160, 527, 869
XceI	RCATGY	1 cut(s)	1107
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1859
XmiI	GTMKAC	1 cut(s)	273
XspI	CTAG	3 cut(s)	654, 912, 1214
Zsp2I	ATGCAT	3 cut(s)	1011, 1105, 1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.