Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005697.1

Orthogroup ID

OG0013120

Physical Location & Seq

Genomic Coordinates Reverse (-)

114327 .. 116264

Gene Structure 1938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005697.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

atgcaaagcgggttgtgccactctttcacattattggccgtcaataatatgagttgctcaaccacggtggctataggaaactcagtattcccgccaaattcaaactcaaaatccagaaatttccaaaatcggagagaagtcatctccctgttgcagaaatgcaaacactatcagatcccacaaatacatgctaaaataataagaaatggccaggaccaagacccattcgtcgtcttcgagcttcttcgtctctgctccaacctcaactccattgactatgcctccaaggttttccgacgcacccaatccccaaacgtgtatctctacactgctctcattgacgggtttgtgtcgtctggctattaccttgatgggattcgtctttactgtcagatggtcaatgagtttatatttccggacaaatatgccatcacttctgtgttgaaagcttgtggctttgggttggctttggaggagggtagagaagtccatgcccaggctttgaagcttgggttgtcctcgaatagatcaataaggatgaaactgatgggtctttatgggaagtgtggtgaatttgaaagtgcacgccaggtgtttgatgaaatgcctgaaggggatgcagttgcggcaaccgtcatgataacttgttatgctgagtatggactagttgaggaggcgagtggtgtttttgaccggctcagggaaaaggatacggtttgctggactgcgatgattgatgggttggttaagaatggggagatgaatagggctttggaggtgtttagggagatgcagaggaagaatgtgaggcctaatgaagttacattggtttgtgttctgtctgcttgttcgcatttgggagctttggagctcggacgatgggtttgctcgtatatagataagaataacattgaatgcaattacattgtgggtggtgctctgattaatatgtattcaaggtgtggtgatattgatggggcagtagaggtgtttagcaggatgaaaaagagagatgtcagtacgtataattccatgattgaggggcttgctatgcatgggaagagcaccatggctattgaaatgttccgggaaatgatgaaacaaggacttaaaccaaatagcattacttttgttaaggtattaaatgcatgtagccatgggggtttggtggagttggggtttgagatatttcattccatgactaatagtcacggcattcaaccgcaaatagaacactatggatgcatggttgatcttctagctcgttcaggacggattgaagaggcgtacagtttcattgaaagaatgaaaatggcaccagatcatatcatgttgggggctttgctaagtgcttgtaaaatccaccgaaacctcgaattaggagaaagagtggccgaaatgttggtaaactgtgatgatgcagattcagggactttcgttttgctgtcaaatgtgtatgctgcatcagggaagtggaaagaggctgcacgagtcagagctttgaccaaggaagctggaactccaaaggagcctggttgtagtttaattgaagtgaacaatgagatccatgagttccttttgggagacattagacacccacagaaagaaaatatctacagaaagttagaggagctaaaccctgtgttaaaaagggaaggatactcgccggcgacagaggtagttttgcatgatattggggaaaggcaaaaggaatgggctctagcaatacatagtgagaggcttgccatatgctacggactaatctctactaaaccgtgtaccactttaaggattgtgaaaaatttgagggtttgcaatgactgccactcaatgatcaagttgatagctaagattactaagagaaagataataatgagggatcgccataggttccatcatttcgagaatggagcttgttcttgtggtgattactggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

645

Amino Acids

72.67

Weight (kDa)

8.06

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59200
fragaria_vesca	FvH4_2g17580
malus_domestica	MD10G1149200.v1.1 MD10G1149700.v1.1
prunus_persica	Prupe.8G188000_v2.0.a1
pyrus_communis	pycom10g12880 pycom10g12910
rosa_chinensis	RchiOBHm_Chr6g0282521
rosa_laevigata	RLG00000012888
rosa_multiflora	Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029
rosa_rugosa	Rorug06G0147100 Rorug06G0147200
rosa_samantha	Rh6CG262700 Rh6DG254600
rosa_wichuraiana	Rw6G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
AccB1I	GGYRCC	1 cut(s)	1315
AccIII	TCCGGA	1 cut(s)	415
AciI	CCGC	4 cut(s)	9, 92, 626, 1223
AclWI	GGATC	3 cut(s)	169, 1558, 1887
AcoI	YGGCCR	3 cut(s)	36, 208, 1392
AcsI	RAATTY	4 cut(s)	97, 118, 572, 1801
AcuI	CTGAAG	1 cut(s)	630
AfaI	GTAC	3 cut(s)	1021, 1289, 1780
AfiI	CCNNNNNNNGG	3 cut(s)	496, 700, 1788
AflIII	ACRYGT	1 cut(s)	315
AhdI	GACNNNNNGTC	1 cut(s)	1206
AhlI	ACTAGT	1 cut(s)	664
AjnI	CCWGG	4 cut(s)	210, 495, 588, 1531
AjuI	GAANNNNNNNTTGG	2 cut(s)	755, 787
AleI	CACNNNNGTG	1 cut(s)	437
Alw21I	GWGCWC	4 cut(s)	586, 873, 940, 1067
Alw26I	GTCTC	2 cut(s)	254, 1578
Alw44I	GTGCAC	1 cut(s)	582
AlwI	GGATC	3 cut(s)	169, 1558, 1887
Aor13HI	TCCGGA	1 cut(s)	415
AoxI	GGCC	4 cut(s)	36, 208, 809, 1392
ApaLI	GTGCAC	1 cut(s)	582
ApeKI	GCWGC	2 cut(s)	1460, 1484
ApoI	RAATTY	4 cut(s)	97, 118, 572, 1801
ArsI	GACNNNNNNTTYG	4 cut(s)	867, 899, 1423, 1455
AseI	ATTAAT	1 cut(s)	945
AspS9I	GGNCC	1 cut(s)	214
AsuC2I	CCSGG	1 cut(s)	1088
AsuHPI	GGTGA	3 cut(s)	581, 977, 1937
AvaII	GGWCC	1 cut(s)	214
BaeGI	GKGCMC	1 cut(s)	586
BalI	TGGCCA	1 cut(s)	210
BanI	GGYRCC	1 cut(s)	1315
BanII	GRGCYC	2 cut(s)	873, 1720
BauI	CACGAG	1 cut(s)	1488
BbsI	GAAGAC	1 cut(s)	226
Bbv12I	GWGCWC	4 cut(s)	586, 873, 940, 1067
BbvI	GCAGC	2 cut(s)	1447, 1471
BccI	CCATC	8 cut(s)	365, 388, 437, 541, 731, 873, 968, 1902
BceAI	ACGGC	2 cut(s)	23, 1228
BcgI	CGANNNNNNTGC	2 cut(s)	867, 901
BciT130I	CCWGG	4 cut(s)	212, 497, 590, 1533
BciVI	GTATCC	2 cut(s)	703, 1652
BclI	TGATCA	1 cut(s)	1833
BcnI	CCSGG	1 cut(s)	1088
BcoDI	GTCTC	2 cut(s)	254, 1578
BcuI	ACTAGT	1 cut(s)	664
BfaI	CTAG	3 cut(s)	665, 1259, 1721
BfmI	CTRYAG	2 cut(s)	72, 1615
BfuI	GTATCC	2 cut(s)	703, 1652
BisI	GCNGC	3 cut(s)	627, 1461, 1485
BlsI	GCNGC	3 cut(s)	628, 1462, 1486
Bme1390I	CCNGG	5 cut(s)	212, 497, 590, 1088, 1533
Bme18I	GGWCC	1 cut(s)	214
BmeRI	GACNNNNNGTC	1 cut(s)	1206
BmgT120I	GGNCC	1 cut(s)	214
BmiI	GGNNCC	3 cut(s)	1317, 1530, 1892
BmrFI	CCNGG	5 cut(s)	212, 497, 590, 1088, 1533
BmsI	GCATC	5 cut(s)	607, 780, 1232, 1408, 1472
BpiI	GAAGAC	1 cut(s)	226
Bpu10I	CCTNAGC	1 cut(s)	698
BpuMI	CCSGG	1 cut(s)	1088
BsaAI	YACGTR	1 cut(s)	1023
BsaJI	CCNNGG	6 cut(s)	63, 285, 495, 1068, 1156, 1506
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	8 cut(s)	251, 266, 281, 296, 1163, 1193, 1374, 1404
Bsc4I	CCNNNNNNNGG	3 cut(s)	496, 700, 1788
Bse118I	RCCGGY	2 cut(s)	693, 1666
Bse1I	ACTGG	1 cut(s)	1937
Bse3DI	GCAATG	1 cut(s)	1822
BseAI	TCCGGA	1 cut(s)	415
BseBI	CCWGG	4 cut(s)	212, 497, 590, 1533
BseDI	CCNNGG	6 cut(s)	63, 285, 495, 1068, 1156, 1506
BseGI	GGATG	4 cut(s)	543, 622, 1005, 1247
BseLI	CCNNNNNNNGG	3 cut(s)	496, 700, 1788
BseMI	GCAATG	1 cut(s)	1822
BseMII	CTCAG	3 cut(s)	96, 645, 712
BseNI	ACTGG	1 cut(s)	1937
BseRI	GAGGAG	3 cut(s)	488, 686, 1643
BseSI	GKGCMC	1 cut(s)	586
BseXI	GCAGC	2 cut(s)	1447, 1471
BsgI	GTGCAG	1 cut(s)	1470
BshFI	GGCC	4 cut(s)	38, 210, 811, 1394
BshNI	GGYRCC	1 cut(s)	1315
BsiHKAI	GWGCWC	4 cut(s)	586, 873, 940, 1067
BsiSI	CCGG	4 cut(s)	416, 694, 1087, 1667
BslFI	GGGAC	1 cut(s)	1444
BslI	CCNNNNNNNGG	3 cut(s)	496, 700, 1788
BsmAI	GTCTC	2 cut(s)	254, 1578
BsmBI	CGTCTC	1 cut(s)	254
BsmFI	GGGAC	1 cut(s)	1444
BsmI	GAATGC	2 cut(s)	920, 1215
BsnI	GGCC	4 cut(s)	38, 210, 811, 1394
Bsp1286I	GDGCHC	5 cut(s)	586, 873, 940, 1067, 1720
Bsp13I	TCCGGA	1 cut(s)	415
Bsp143I	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
Bsp19I	CCATGG	2 cut(s)	1068, 1156
BspACI	CCGC	4 cut(s)	9, 92, 626, 1223
BspANI	GGCC	4 cut(s)	38, 210, 811, 1394
BspCNI	CTCAG	3 cut(s)	95, 646, 711
BspEI	TCCGGA	1 cut(s)	415
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	3 cut(s)	1317, 1530, 1892
BspPI	GGATC	3 cut(s)	169, 1558, 1887
BspQI	GCTCTTC	1 cut(s)	1055
BspT107I	GGYRCC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	1822
BsrFI	RCCGGY	2 cut(s)	693, 1666
BsrI	ACTGG	1 cut(s)	1937
BssAI	RCCGGY	2 cut(s)	693, 1666
BssECI	CCNNGG	6 cut(s)	63, 285, 495, 1068, 1156, 1506
BssMI	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
BssSI	CACGAG	1 cut(s)	1488
BssT1I	CCWWGG	4 cut(s)	285, 1068, 1156, 1506
Bst2BI	CACGAG	1 cut(s)	1488
Bst2UI	CCWGG	4 cut(s)	212, 497, 590, 1533
Bst4CI	ACNGT	7 cut(s)	67, 389, 634, 715, 1292, 1412, 1776
Bst6I	CTCTTC	2 cut(s)	1055, 1275
BstAPI	GCANNNNNTGC	1 cut(s)	1821
BstBAI	YACGTR	1 cut(s)	1023
BstC8I	GCNNGC	4 cut(s)	586, 1047, 1668, 1743
BstDEI	CTNAG	6 cut(s)	82, 654, 698, 1346, 1848, 1857
BstDSI	CCRYGG	3 cut(s)	63, 1068, 1156
BstF5I	GGATG	4 cut(s)	543, 622, 1005, 1247
BstKTI	GATC	7 cut(s)	177, 530, 1255, 1324, 1566, 1836, 1882
BstMAI	GTCTC	2 cut(s)	254, 1578
BstMBI	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
BstMWI	GCNNNNNNNGC	4 cut(s)	15, 626, 1051, 1821
BstNI	CCWGG	4 cut(s)	212, 497, 590, 1533
BstNSI	RCATGY	2 cut(s)	191, 1152
BstSCI	CCNGG	5 cut(s)	210, 495, 588, 1086, 1531
BstSFI	CTRYAG	2 cut(s)	72, 1615
BstSLI	GKGCMC	1 cut(s)	586
BstSNI	TACGTA	1 cut(s)	1023
BstV1I	GCAGC	2 cut(s)	1447, 1471
BstV2I	GAAGAC	1 cut(s)	226
BstX2I	RGATCY	2 cut(s)	174, 1563
BstYI	RGATCY	2 cut(s)	174, 1563
BsuI	GTATCC	2 cut(s)	703, 1652
BsuRI	GGCC	4 cut(s)	38, 210, 811, 1394
BtgI	CCRYGG	3 cut(s)	63, 1068, 1156
BtgZI	GCGATG	1 cut(s)	743
BtsCI	GGATG	4 cut(s)	543, 622, 1005, 1247
BtsI	GCAGTG	1 cut(s)	327
BtsIMutI	CAGTG	1 cut(s)	327
Cac8I	GCNNGC	4 cut(s)	586, 1047, 1668, 1743
CciI	TCATGA	1 cut(s)	636
Cfr10I	RCCGGY	2 cut(s)	693, 1666
Cfr13I	GGNCC	1 cut(s)	214
CseI	GACGC	1 cut(s)	306
Csp6I	GTAC	3 cut(s)	1020, 1288, 1779
CspCI	CAANNNNNGTGG	2 cut(s)	48, 83
CviQI	GTAC	3 cut(s)	1020, 1288, 1779
DdeI	CTNAG	6 cut(s)	82, 654, 698, 1346, 1848, 1857
DpnI	GATC	7 cut(s)	176, 529, 1254, 1323, 1565, 1835, 1881
DpnII	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
DrdI	GACNNNNNNGTC	1 cut(s)	227
DriI	GACNNNNNGTC	1 cut(s)	1206
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	3 cut(s)	36, 208, 1392
Eam1104I	CTCTTC	2 cut(s)	1055, 1275
Eam1105I	GACNNNNNGTC	1 cut(s)	1206
EarI	CTCTTC	2 cut(s)	1055, 1275
Ecl136II	GAGCTC	1 cut(s)	871
Eco105I	TACGTA	1 cut(s)	1023
Eco130I	CCWWGG	4 cut(s)	285, 1068, 1156, 1506
Eco147I	AGGCCT	1 cut(s)	811
Eco24I	GRGCYC	2 cut(s)	873, 1720
Eco47I	GGWCC	1 cut(s)	214
Eco53kI	GAGCTC	1 cut(s)	871
Eco57I	CTGAAG	1 cut(s)	630
EcoICRI	GAGCTC	1 cut(s)	871
EcoRII	CCWGG	4 cut(s)	210, 495, 588, 1531
EcoT14I	CCWWGG	4 cut(s)	285, 1068, 1156, 1506
EcoT22I	ATGCAT	3 cut(s)	1056, 1150, 1247
EcoT38I	GRGCYC	2 cut(s)	873, 1720
ErhI	CCWWGG	4 cut(s)	285, 1068, 1156, 1506
Esp3I	CGTCTC	1 cut(s)	254
FaqI	GGGAC	1 cut(s)	1444
FauI	CCCGC	2 cut(s)	2, 99
FauNDI	CATATG	1 cut(s)	1748
FbaI	TGATCA	1 cut(s)	1833
Fnu4HI	GCNGC	3 cut(s)	627, 1461, 1485
FokI	GGATG	4 cut(s)	550, 629, 1012, 1254
FriOI	GRGCYC	2 cut(s)	873, 1720
Fsp4HI	GCNGC	3 cut(s)	627, 1461, 1485
FspBI	CTAG	3 cut(s)	665, 1259, 1721
GluI	GCNGC	3 cut(s)	627, 1461, 1485
HaeIII	GGCC	4 cut(s)	38, 210, 811, 1394
HapII	CCGG	4 cut(s)	416, 694, 1087, 1667
HgaI	GACGC	1 cut(s)	306
HindIII	AAGCTT	2 cut(s)	447, 506
HinfI	GANTC	3 cut(s)	376, 1424, 1491
HpaII	CCGG	4 cut(s)	416, 694, 1087, 1667
HphI	GGTGA	3 cut(s)	581, 977, 1937
Hpy166II	GTNNAC	4 cut(s)	584, 1408, 1555, 1779
Hpy188I	TCNGA	7 cut(s)	132, 174, 296, 393, 875, 942, 1496
Hpy188III	TCNNGA	5 cut(s)	114, 416, 637, 1269, 1903
Hpy8I	GTNNAC	4 cut(s)	584, 1408, 1555, 1779
Hpy99I	CGWCG	2 cut(s)	233, 300
HpyAV	CCTTC	2 cut(s)	605, 1649
HpyCH4III	ACNGT	7 cut(s)	67, 389, 634, 715, 1292, 1412, 1776
HpyCH4IV	ACGT	2 cut(s)	315, 1022
HpyF10VI	GCNNNNNNNGC	4 cut(s)	15, 626, 1051, 1821
HpyF3I	CTNAG	6 cut(s)	82, 654, 698, 1346, 1848, 1857
HpySE526I	ACGT	2 cut(s)	315, 1022
Kpn2I	TCCGGA	1 cut(s)	415
KroI	GCCGGC	1 cut(s)	1666
KroNI	GCCGGC	1 cut(s)	1668
Ksp22I	TGATCA	1 cut(s)	1833
Kzo9I	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
LguI	GCTCTTC	1 cut(s)	1055
LmnI	GCTCC	6 cut(s)	260, 860, 868, 1528, 1630, 1910
Lsp1109I	GCAGC	2 cut(s)	1447, 1471
LweI	GCATC	5 cut(s)	607, 780, 1232, 1408, 1472
MaeI	CTAG	3 cut(s)	665, 1259, 1721
MaeII	ACGT	2 cut(s)	315, 1022
MaeIII	GTNAC	2 cut(s)	820, 1208
MalI	GATC	7 cut(s)	176, 529, 1254, 1323, 1565, 1835, 1881
MboI	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
MboII	GAAGA	6 cut(s)	226, 236, 811, 1072, 1247, 1292
MflI	RGATCY	2 cut(s)	174, 1563
MhlI	GDGCHC	5 cut(s)	586, 873, 940, 1067, 1720
MlsI	TGGCCA	1 cut(s)	210
MluCI	AATT	8 cut(s)	97, 118, 572, 919, 1027, 1376, 1545, 1801
MluNI	TGGCCA	1 cut(s)	210
MlyI	GAGTC	1 cut(s)	1500
MmeI	TCCRAC	2 cut(s)	282, 319
Mox20I	TGGCCA	1 cut(s)	210
Mph1103I	ATGCAT	3 cut(s)	1056, 1150, 1247
MreI	CGCCGGCG	1 cut(s)	1666
MroI	TCCGGA	1 cut(s)	415
MroNI	GCCGGC	1 cut(s)	1666
MscI	TGGCCA	1 cut(s)	210
MseI	TTAA	8 cut(s)	747, 945, 1110, 1134, 1142, 1544, 1646, 1787
MslI	CAYNNNNRTG	1 cut(s)	437
Msp20I	TGGCCA	1 cut(s)	210
MspI	CCGG	4 cut(s)	416, 694, 1087, 1667
MspR9I	CCNGG	5 cut(s)	212, 497, 590, 1088, 1533
Mva1269I	GAATGC	2 cut(s)	920, 1215
MvaI	CCWGG	4 cut(s)	212, 497, 590, 1533
MwoI	GCNNNNNNNGC	4 cut(s)	15, 626, 1051, 1821
NaeI	GCCGGC	1 cut(s)	1668
NciI	CCSGG	1 cut(s)	1088
NcoI	CCATGG	2 cut(s)	1068, 1156
NdeI	CATATG	1 cut(s)	1748
NdeII	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
NgoMIV	GCCGGC	1 cut(s)	1666
NlaIV	GGNNCC	3 cut(s)	1317, 1530, 1892
NmuCI	GTSAC	1 cut(s)	1208
NsiI	ATGCAT	3 cut(s)	1056, 1150, 1247
NspI	RCATGY	2 cut(s)	191, 1152
OliI	CACNNNNGTG	1 cut(s)	437
PagI	TCATGA	1 cut(s)	636
PceI	AGGCCT	1 cut(s)	811
PciSI	GCTCTTC	1 cut(s)	1055
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	2 cut(s)	920, 1215
PdiI	GCCGGC	1 cut(s)	1668
PfeI	GAWTC	2 cut(s)	376, 1424
PfoI	TCCNGGA	1 cut(s)	1086
PkrI	GCNGC	3 cut(s)	628, 1462, 1486
PleI	GAGTC	1 cut(s)	1499
PpsI	GAGTC	1 cut(s)	1499
Ppu21I	YACGTR	1 cut(s)	1023
PshBI	ATTAAT	1 cut(s)	945
Psp124BI	GAGCTC	1 cut(s)	873
Psp6I	CCWGG	4 cut(s)	210, 495, 588, 1531
PspGI	CCWGG	4 cut(s)	210, 495, 588, 1531
PspN4I	GGNNCC	3 cut(s)	1317, 1530, 1892
PspPI	GGNCC	1 cut(s)	214
PsuI	RGATCY	2 cut(s)	174, 1563
RsaI	GTAC	3 cut(s)	1021, 1289, 1780
RsaNI	GTAC	3 cut(s)	1020, 1288, 1779
RseI	CAYNNNNRTG	1 cut(s)	437
SacI	GAGCTC	1 cut(s)	873
SapI	GCTCTTC	1 cut(s)	1055
SaqAI	TTAA	8 cut(s)	747, 945, 1110, 1134, 1142, 1544, 1646, 1787
SatI	GCNGC	3 cut(s)	627, 1461, 1485
Sau3AI	GATC	7 cut(s)	174, 527, 1252, 1321, 1563, 1833, 1879
Sau96I	GGNCC	1 cut(s)	214
SchI	GAGTC	1 cut(s)	1500
ScrFI	CCNGG	5 cut(s)	212, 497, 590, 1088, 1533
SduI	GDGCHC	5 cut(s)	586, 873, 940, 1067, 1720
SfaNI	GCATC	5 cut(s)	607, 780, 1232, 1408, 1472
SfcI	CTRYAG	2 cut(s)	72, 1615
SgrAI	CRCCGGYG	1 cut(s)	1666
SinI	GGWCC	1 cut(s)	214
SmiMI	CAYNNNNRTG	1 cut(s)	437
SnaBI	TACGTA	1 cut(s)	1023
SpeI	ACTAGT	1 cut(s)	664
Sse9I	AATT	8 cut(s)	97, 118, 572, 919, 1027, 1376, 1545, 1801
SseBI	AGGCCT	1 cut(s)	811
SsiI	CCGC	4 cut(s)	9, 92, 626, 1223
SspMI	CTAG	3 cut(s)	665, 1259, 1721
SstI	GAGCTC	1 cut(s)	873
StuI	AGGCCT	1 cut(s)	811
StyD4I	CCNGG	5 cut(s)	210, 495, 588, 1086, 1531
StyI	CCWWGG	4 cut(s)	285, 1068, 1156, 1506
TaaI	ACNGT	7 cut(s)	67, 389, 634, 715, 1292, 1412, 1776
TaiI	ACGT	2 cut(s)	318, 1025
TaqI	TCGA	4 cut(s)	237, 521, 1374, 1902
TasI	AATT	8 cut(s)	97, 118, 572, 919, 1027, 1376, 1545, 1801
TauI	GCSGC	1 cut(s)	629
TfiI	GAWTC	2 cut(s)	376, 1424
Tru1I	TTAA	8 cut(s)	747, 945, 1110, 1134, 1142, 1544, 1646, 1787
Tru9I	TTAA	8 cut(s)	747, 945, 1110, 1134, 1142, 1544, 1646, 1787
TscAI	CASTG	1 cut(s)	334
TseFI	GTSAC	1 cut(s)	1208
TseI	GCWGC	2 cut(s)	1460, 1484
Tsp45I	GTSAC	1 cut(s)	1208
TspDTI	ATGAA	9 cut(s)	554, 615, 776, 831, 1016, 1112, 1181, 1285, 1322
TspGWI	ACGGA	2 cut(s)	1288, 1770
TspRI	CASTG	1 cut(s)	334
VneI	GTGCAC	1 cut(s)	582
VpaK11BI	GGWCC	1 cut(s)	214
VspI	ATTAAT	1 cut(s)	945
XapI	RAATTY	4 cut(s)	97, 118, 572, 1801
XceI	RCATGY	2 cut(s)	191, 1152
XspI	CTAG	3 cut(s)	665, 1259, 1721
Zsp2I	ATGCAT	3 cut(s)	1056, 1150, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.