FvH4_2g20860

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0007909
Physical Location & Seq
Reverse (-)
17410119 .. 17417080
6962 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g20860.t1

Sequence Viewer

Length: 2097 bp
ATGGCTTCAGATTCCGGTACCCGCCGCGACGGCGTCGTTTCGCCTGCGAACAAGAACCCCCTCACCTTTCACCTCCAGAAGCTCGGCCTCGAGCTCACTTGCCCTCTCTGCATGGGGTTTTTCAACCGGCCGACATTGCTGCCGTGCAATCACATCTTCTGCAACGGCTGTGTGCCTAATCGGAACAATTTCGGAGCAGAGTGTCCTCTGTGTAATATTCAAGTTCTTGGCGAAGATCTGAGGCATGCGCCTTTTATGGAAAGCATAGTAGCAATCTACAAAGGCATGAAGGCCACGTACTGTACCAGCTCCTCCCCGCCTATATCTTCAGATGTTAGAACAGATTTGGCTCGCCCAGTTTCACAGGATGTCAGTTTTACTGGGAAAACAACGACTAAAGAACCGTTTGACAATTTCCAAGAGGGTACCATTTTTTCATCAAGGGGTAATAACCGAGTTTGGGTTCCATGTAGTCGGAAAGATTCTGTGACAGTTGGAATTGGCAAGAATGAGAAAGTAGATACCTGTAGCATGCCGATAGATGGTAACAGTGAAGAATTTGACTTGGGTACAGGACATCAATTTAATGGTGAGGTAGATCACAAGTCACCATTACCAAGTTCTCAAATAAGATCTGTAACAATGGATGAGTGTATGACTGCAGAAAGAGACATGAATCCTGTAGTGCATTCGTTGCTGGATAGTCCTCCTTCATTTGGTGATCCCAGAGGTTCAGATAATGATAATAGCTTTTACCAGCGCTCTGAGCAAATTTCAGACAGTTCTTTGATCAGGGGGTCAATTAGGAAAATTGATGATAGAACAGGGCAGATGAGGCTGGATAGTTCGGCATCTGATACTGATGGTCATTTGAGGGAACTCAAAAGACAAAAGAAACTGGACTATGGACCAGTCTCAGGGTCTAATTCTGAGCTGAAACTTGGAACAACTTCTAACGAGTCTTCCACAATTAACACCATTTGTGCCTTTTGCCATTCTTCCACAATCTCAGAGGTCACTGGGCCAATGTTGCACTATTCCAAGGGGAAATTGGTGGAGGGAGATGCGGCAACTGTTTCAGATGTCATACATGTTCACAGGATATGCATTAATTGGGCACCTCAAGTGTACTATAAAGATGATACCATAAAAAATTTGAAGGCTGAAGTGACAAGGGGTGCAAAACTAAAATGCACTAAATGTGGGATAAAGGGAGCAGCATTGGGATGCTATGTAAAATCCTGCCGAAGAAGCTACCATGTTACCTGTGCAATTGAAATTTCTAAGTGTCGTTGGGATTATGAAAACTTTCTGCTGCTGTGTCCAGCACATACGACAGATAGATTTCCCAATGAGAAGTTGAATCGTAACAAGAACAAGAAATGTCAGCTCTCTGGTGGTACAGTAGCTTCAAATGGAGTGAACAACTGGGTTTTATGCCCTTCTGGTTTGTCTTCTGAAGAGAAGATTCTTCTGATCAACTTTGCTGAGATGAACTGTGCAACTTTGTCAAAGAGCTGGACACCTGATGTTACCCATGTGATTGCTGCCCTTGATGGGGATGGTGCATATGTCCGGACGTTTAAAATTTTCATGGCGATTTTGGCAGGAAAATGGATTGTGACAATCGACTGGGTAAAAGCATGCATGGAAACCAAGCATCATGTGGATGAAGAACCTTATGAAGTTAATCTTGATAACTATGGGTGTCGCAGTGGCGCGAAAGCTGGCAGGCTTAGGGCACTAAGCAATGATCTGAAGCTCTTCAATGGTTTGAATTTCTATTTTGCTGGTGATTTTATACTGGAGAGGATGGAAGACTACAAAGAATTGGTCCTAGCTGCAGGAGGTACTGTTTTCAACAGTAAGGAAGAACTGCTGGAAGCAAGTTGTCATGAAACGGGTGCTGCTAGGACACTGGTTGTGTACAACCTTGATCCCCCACCAGGATGCAAGTTGGGGGAAGAAGTTTCAATACTTTGGCAAAGGTCTAATGAGGCACAAGATATAGCTGCAAAAATCGGAGGCGAGTACGTCTTTCACACATGGTTGTTGGAGTCAATTGCGAGATATGAGTTGCAGCCAATTGTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 PTCB-BRCT zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

699

Amino Acids

77.14

Weight (kDa)

6.25

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 32 - 75 1e-05 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 34 - 71 4.4e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 34 - 71 6.1e-06 Zinc finger, C3HC4 type (RING finger)
zf-HC5HC2H_2 PF13832 358 - 426 1.2e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 366 - 444 1.8e-10 PHD-like zinc-binding domain
BRCT PF00533 480 - 550 1.2e-08 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 17, 425
AccB1I GGYRCC 3 cut(s) 17, 425, 1117
AccII CGCG 2 cut(s) 27, 1721
AccIII TCCGGA 1 cut(s) 1575
AciI CCGC 4 cut(s) 22, 25, 317, 1067
AclWI GGATC 2 cut(s) 716, 1931
AcoI YGGCCR 1 cut(s) 128
AcsI RAATTY 6 cut(s) 557, 771, 1153, 1278, 1587, 1777
AcuI CTGAAG 4 cut(s) 312, 1185, 1479, 1778
AcyI GRCGYC 1 cut(s) 33
AfeI AGCGCT 1 cut(s) 761
AfiI CCNNNNNNNGG 7 cut(s) 460, 542, 716, 917, 1557, 1558, 1946
AflIII ACRYGT 1 cut(s) 1090
AjnI CCWGG 1 cut(s) 1945
Alw21I GWGCWC 1 cut(s) 96
Alw26I GTCTC 2 cut(s) 663, 919
AlwI GGATC 2 cut(s) 716, 1931
Ama87I CYCGRG 1 cut(s) 89
Aor13HI TCCGGA 1 cut(s) 1575
Aor51HI AGCGCT 1 cut(s) 761
AoxI GGCC 4 cut(s) 85, 128, 291, 1022
ApeKI GCWGC 8 cut(s) 139, 1217, 1315, 1547, 1841, 1907, 2012, 2080
ApoI RAATTY 6 cut(s) 557, 771, 1153, 1278, 1587, 1777
ArsI GACNNNNNNTTYG 2 cut(s) 1818, 1850
AseI ATTAAT 1 cut(s) 1110
Asp700I GAANNNNTTC 4 cut(s) 188, 949, 1308, 1763
Asp718I GGTACC 2 cut(s) 17, 425
AspLEI GCGC 3 cut(s) 250, 762, 1721
AspS9I GGNCC 3 cut(s) 908, 1022, 1834
AsuHPI GGTGA 6 cut(s) 55, 62, 600, 602, 731, 1805
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 2 cut(s) 908, 1834
BaeGI GKGCMC 2 cut(s) 1120, 1744
BanI GGYRCC 3 cut(s) 17, 425, 1117
BanII GRGCYC 1 cut(s) 96
BarI GAAGNNNNNNTAC 6 cut(s) 281, 313, 1393, 1425, 1959, 1991
BbsI GAAGAC 3 cut(s) 954, 1446, 1824
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 8 cut(s) 126, 1229, 1302, 1534, 1828, 1894, 1999, 2092
BccI CCATC 5 cut(s) 536, 857, 1550, 1556, 1807
BceAI ACGGC 3 cut(s) 46, 127, 181
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 1 cut(s) 1947
BclI TGATCA 2 cut(s) 789, 1476
BcoDI GTCTC 2 cut(s) 663, 919
BfaI CTAG 2 cut(s) 1838, 1911
BfmI CTRYAG 4 cut(s) 526, 660, 681, 1842
BfoI RGCGCY 1 cut(s) 763
BglI GCCNNNNNGGC 1 cut(s) 30
BglII AGATCT 2 cut(s) 235, 632
Bme1390I CCNGG 1 cut(s) 1947
Bme18I GGWCC 2 cut(s) 908, 1834
BmeT110I CYCGRG 1 cut(s) 89
BmgT120I GGNCC 3 cut(s) 908, 1022, 1834
BmiI GGNNCC 4 cut(s) 19, 427, 465, 1119
BmrFI CCNGG 1 cut(s) 1947
BmrI ACTGGG 5 cut(s) 350, 390, 1029, 1438, 1642
BmsI GCATC 5 cut(s) 860, 1054, 1217, 1669, 1940
BmuI ACTGGG 5 cut(s) 350, 390, 1029, 1438, 1642
BpiI GAAGAC 3 cut(s) 954, 1446, 1824
BpmI CTGGAG 2 cut(s) 59, 1826
Bpu10I CCTNAGC 1 cut(s) 1736
BpuEI CTTGAG 1 cut(s) 1107
BsaAI YACGTR 1 cut(s) 297
BsaHI GRCGYC 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 1041
BsaWI WCCGGW 2 cut(s) 14, 1575
BsaXI ACNNNNNCTCC 2 cut(s) 1839, 1869
Bsc4I CCNNNNNNNGG 7 cut(s) 460, 542, 716, 917, 1557, 1558, 1946
Bse118I RCCGGY 1 cut(s) 126
Bse1I ACTGG 9 cut(s) 356, 385, 903, 911, 1024, 1433, 1637, 1809, 1923
Bse3DI GCAATG 2 cut(s) 134, 1756
BseAI TCCGGA 1 cut(s) 1575
BseBI CCWGG 1 cut(s) 1947
BseDI CCNNGG 1 cut(s) 1041
BseGI GGATG 7 cut(s) 373, 652, 1232, 1567, 1675, 1818, 1955
BseLI CCNNNNNNNGG 7 cut(s) 460, 542, 716, 917, 1557, 1558, 1946
BseMI GCAATG 2 cut(s) 134, 1756
BseMII CTCAG 6 cut(s) 230, 756, 921, 930, 1023, 1479
BseNI ACTGG 9 cut(s) 356, 385, 903, 911, 1024, 1433, 1637, 1809, 1923
BseRI GAGGAG 1 cut(s) 301
BseSI GKGCMC 2 cut(s) 1120, 1744
BseX3I CGGCCG 1 cut(s) 128
BseXI GCAGC 8 cut(s) 126, 1229, 1302, 1534, 1828, 1894, 1999, 2092
Bsh1236I CGCG 2 cut(s) 27, 1721
Bsh1285I CGRYCG 1 cut(s) 131
BshFI GGCC 4 cut(s) 87, 130, 293, 1024
BshNI GGYRCC 3 cut(s) 17, 425, 1117
BsiEI CGRYCG 1 cut(s) 131
BsiHKAI GWGCWC 1 cut(s) 96
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 3 cut(s) 15, 127, 1576
BslI CCNNNNNNNGG 7 cut(s) 460, 542, 716, 917, 1557, 1558, 1946
BsmAI GTCTC 2 cut(s) 663, 919
BsmI GAATGC 1 cut(s) 688
BsnI GGCC 4 cut(s) 87, 130, 293, 1024
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 3 cut(s) 96, 1120, 1744
Bsp13I TCCGGA 1 cut(s) 1575
Bsp1407I TGTACA 1 cut(s) 1926
Bsp143I GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
BspACI CCGC 4 cut(s) 22, 25, 317, 1067
BspANI GGCC 4 cut(s) 87, 130, 293, 1024
BspCNI CTCAG 6 cut(s) 231, 757, 922, 929, 1022, 1480
BspEI TCCGGA 1 cut(s) 1575
BspFNI CGCG 2 cut(s) 27, 1721
BspHI TCATGA 1 cut(s) 1894
BspLI GGNNCC 4 cut(s) 19, 427, 465, 1119
BspMAI CTGCAG 2 cut(s) 664, 1846
BspPI GGATC 2 cut(s) 716, 1931
BspQI GCTCTTC 1 cut(s) 1769
BspT107I GGYRCC 3 cut(s) 17, 425, 1117
BsrDI GCAATG 2 cut(s) 134, 1756
BsrFI RCCGGY 1 cut(s) 126
BsrGI TGTACA 1 cut(s) 1926
BsrI ACTGG 9 cut(s) 356, 385, 903, 911, 1024, 1433, 1637, 1809, 1923
BssAI RCCGGY 1 cut(s) 126
BssECI CCNNGG 1 cut(s) 1041
BssMI GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
BssNI GRCGYC 1 cut(s) 33
BssT1I CCWWGG 1 cut(s) 1041
Bst2UI CCWGG 1 cut(s) 1947
Bst6I CTCTTC 2 cut(s) 1455, 1769
BstACI GRCGYC 1 cut(s) 33
BstAPI GCANNNNNTGC 1 cut(s) 694
BstAUI TGTACA 1 cut(s) 1926
BstBAI YACGTR 1 cut(s) 297
BstC8I GCNNGC 7 cut(s) 45, 246, 352, 533, 1645, 1729, 1733
BstDEI CTNAG 9 cut(s) 239, 765, 916, 930, 1009, 1284, 1488, 1736, 1745
BstF5I GGATG 7 cut(s) 373, 652, 1232, 1567, 1675, 1818, 1955
BstFNI CGCG 2 cut(s) 27, 1721
BstH2I RGCGCY 1 cut(s) 763
BstHHI GCGC 3 cut(s) 250, 762, 1721
BstKTI GATC 8 cut(s) 238, 601, 635, 724, 792, 1479, 1756, 1939
BstMAI GTCTC 2 cut(s) 663, 919
BstMBI GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
BstMCI CGRYCG 1 cut(s) 131
BstMWI GCNNNNNNNGC 9 cut(s) 30, 108, 136, 694, 766, 835, 1030, 1251, 1604
BstNI CCWGG 1 cut(s) 1947
BstNSI RCATGY 4 cut(s) 248, 535, 1094, 1647
BstSCI CCNGG 1 cut(s) 1945
BstSFI CTRYAG 4 cut(s) 526, 660, 681, 1842
BstSLI GKGCMC 2 cut(s) 1120, 1744
BstUI CGCG 2 cut(s) 27, 1721
BstV1I GCAGC 8 cut(s) 126, 1229, 1302, 1534, 1828, 1894, 1999, 2092
BstV2I GAAGAC 3 cut(s) 954, 1446, 1824
BstX2I RGATCY 2 cut(s) 235, 632
BstYI RGATCY 2 cut(s) 235, 632
BstZI CGGCCG 1 cut(s) 128
BsuRI GGCC 4 cut(s) 87, 130, 293, 1024
BtsCI GGATG 7 cut(s) 373, 652, 1232, 1567, 1675, 1818, 1955
BtsI GCAGTG 1 cut(s) 1720
BtsIMutI CAGTG 4 cut(s) 556, 1017, 1720, 1916
Cac8I GCNNGC 7 cut(s) 45, 246, 352, 533, 1645, 1729, 1733
CciI TCATGA 1 cut(s) 1894
CfoI GCGC 3 cut(s) 250, 762, 1721
Cfr10I RCCGGY 1 cut(s) 126
Cfr13I GGNCC 3 cut(s) 908, 1022, 1834
CseI GACGC 1 cut(s) 22
DdeI CTNAG 9 cut(s) 239, 765, 916, 930, 1009, 1284, 1488, 1736, 1745
DpnI GATC 8 cut(s) 237, 600, 634, 723, 791, 1478, 1755, 1938
DpnII GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
DraI TTTAAA 1 cut(s) 1585
EaeI YGGCCR 1 cut(s) 128
EagI CGGCCG 1 cut(s) 128
Eam1104I CTCTTC 2 cut(s) 1455, 1769
EarI CTCTTC 2 cut(s) 1455, 1769
Ecl136II GAGCTC 1 cut(s) 94
EclXI CGGCCG 1 cut(s) 128
Eco130I CCWWGG 1 cut(s) 1041
Eco24I GRGCYC 1 cut(s) 96
Eco47I GGWCC 2 cut(s) 908, 1834
Eco47III AGCGCT 1 cut(s) 761
Eco52I CGGCCG 1 cut(s) 128
Eco53kI GAGCTC 1 cut(s) 94
Eco57I CTGAAG 4 cut(s) 312, 1185, 1479, 1778
Eco88I CYCGRG 1 cut(s) 89
EcoICRI GAGCTC 1 cut(s) 94
EcoRII CCWGG 1 cut(s) 1945
EcoT14I CCWWGG 1 cut(s) 1041
EcoT22I ATGCAT 2 cut(s) 1109, 1649
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 1041
FalI AAGNNNNNCTT 2 cut(s) 1677, 1709
FauI CCCGC 2 cut(s) 29, 324
FauNDI CATATG 1 cut(s) 1570
FbaI TGATCA 2 cut(s) 789, 1476
FokI GGATG 7 cut(s) 380, 659, 1239, 1574, 1682, 1825, 1962
FriOI GRGCYC 1 cut(s) 96
FspBI CTAG 2 cut(s) 1838, 1911
GlaI GCGC 3 cut(s) 249, 761, 1720
GsuI CTGGAG 2 cut(s) 59, 1826
HaeII RGCGCY 1 cut(s) 763
HaeIII GGCC 4 cut(s) 87, 130, 293, 1024
HapII CCGG 3 cut(s) 15, 127, 1576
HgaI GACGC 1 cut(s) 22
HhaI GCGC 3 cut(s) 250, 762, 1721
Hin1I GRCGYC 1 cut(s) 33
Hin6I GCGC 3 cut(s) 248, 760, 1719
HinP1I GCGC 3 cut(s) 248, 760, 1719
HinfI GANTC 7 cut(s) 11, 482, 676, 959, 1363, 1468, 2057
HpaII CCGG 3 cut(s) 15, 127, 1576
HphI GGTGA 6 cut(s) 55, 62, 600, 602, 731, 1805
Hpy166II GTNNAC 4 cut(s) 1096, 1129, 1423, 1927
Hpy188III TCNNGA 4 cut(s) 76, 1576, 1694, 1895
Hpy8I GTNNAC 4 cut(s) 1096, 1129, 1423, 1927
Hpy99I CGWCG 2 cut(s) 32, 38
HpyAV CCTTC 4 cut(s) 283, 720, 1153, 1452
HpyCH4IV ACGT 3 cut(s) 296, 1580, 2034
HpyF10VI GCNNNNNNNGC 9 cut(s) 30, 108, 136, 694, 766, 835, 1030, 1251, 1604
HpyF3I CTNAG 9 cut(s) 239, 765, 916, 930, 1009, 1284, 1488, 1736, 1745
HpySE526I ACGT 3 cut(s) 296, 1580, 2034
Hsp92I GRCGYC 1 cut(s) 33
HspAI GCGC 3 cut(s) 248, 760, 1719
Kpn2I TCCGGA 1 cut(s) 1575
KpnI GGTACC 2 cut(s) 21, 429
Ksp22I TGATCA 2 cut(s) 789, 1476
Kzo9I GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
LguI GCTCTTC 1 cut(s) 1769
LmnI GCTCC 3 cut(s) 194, 314, 1214
Lsp1109I GCAGC 8 cut(s) 126, 1229, 1302, 1534, 1828, 1894, 1999, 2092
LweI GCATC 5 cut(s) 860, 1054, 1217, 1669, 1940
MaeI CTAG 2 cut(s) 1838, 1911
MaeII ACGT 3 cut(s) 296, 1580, 2034
MalI GATC 8 cut(s) 237, 600, 634, 723, 791, 1478, 1755, 1938
MboI GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
MfeI CAATTG 3 cut(s) 1272, 2061, 2085
MflI RGATCY 2 cut(s) 235, 632
MhlI GDGCHC 3 cut(s) 96, 1120, 1744
MlyI GAGTC 2 cut(s) 968, 2066
MmeI TCCRAC 3 cut(s) 455, 475, 2034
Mph1103I ATGCAT 2 cut(s) 1109, 1649
MroI TCCGGA 1 cut(s) 1575
MroXI GAANNNNTTC 4 cut(s) 188, 949, 1308, 1763
MseI TTAA 5 cut(s) 585, 972, 1110, 1584, 1689
MslI CAYNNNNRTG 3 cut(s) 1225, 1668, 1948
MspI CCGG 3 cut(s) 15, 127, 1576
MspR9I CCNGG 1 cut(s) 1947
MunI CAATTG 3 cut(s) 1272, 2061, 2085
Mva1269I GAATGC 1 cut(s) 688
MvaI CCWGG 1 cut(s) 1947
MvnI CGCG 2 cut(s) 27, 1721
MwoI GCNNNNNNNGC 9 cut(s) 30, 108, 136, 694, 766, 835, 1030, 1251, 1604
NdeI CATATG 1 cut(s) 1570
NdeII GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
NlaIV GGNNCC 4 cut(s) 19, 427, 465, 1119
NmeAIII GCCGAG 1 cut(s) 63
NmuCI GTSAC 5 cut(s) 487, 606, 1015, 1168, 1621
NsiI ATGCAT 2 cut(s) 1109, 1649
NspI RCATGY 4 cut(s) 248, 535, 1094, 1647
PaeI GCATGC 3 cut(s) 248, 535, 1647
PaeR7I CTCGAG 1 cut(s) 89
PagI TCATGA 1 cut(s) 1894
PciI ACATGT 1 cut(s) 1090
PciSI GCTCTTC 1 cut(s) 1769
PctI GAATGC 1 cut(s) 688
PdmI GAANNNNTTC 4 cut(s) 188, 949, 1308, 1763
PfeI GAWTC 5 cut(s) 11, 482, 676, 1363, 1468
PflFI GACNNNGTC 1 cut(s) 32
PleI GAGTC 2 cut(s) 967, 2065
PpsI GAGTC 2 cut(s) 967, 2065
Ppu21I YACGTR 1 cut(s) 297
PscI ACATGT 1 cut(s) 1090
PshBI ATTAAT 1 cut(s) 1110
Psp124BI GAGCTC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 1945
PspGI CCWGG 1 cut(s) 1945
PspN4I GGNNCC 4 cut(s) 19, 427, 465, 1119
PspPI GGNCC 3 cut(s) 908, 1022, 1834
PspXI VCTCGAGB 1 cut(s) 89
PstI CTGCAG 2 cut(s) 664, 1846
PsuI RGATCY 2 cut(s) 235, 632
PsyI GACNNNGTC 1 cut(s) 32
RseI CAYNNNNRTG 3 cut(s) 1225, 1668, 1948
SacI GAGCTC 1 cut(s) 96
SapI GCTCTTC 1 cut(s) 1769
SaqAI TTAA 5 cut(s) 585, 972, 1110, 1584, 1689
Sau3AI GATC 8 cut(s) 235, 598, 632, 721, 789, 1476, 1753, 1936
Sau96I GGNCC 3 cut(s) 908, 1022, 1834
SchI GAGTC 2 cut(s) 968, 2066
ScrFI CCNGG 1 cut(s) 1947
SduI GDGCHC 3 cut(s) 96, 1120, 1744
SfaNI GCATC 5 cut(s) 860, 1054, 1217, 1669, 1940
SfcI CTRYAG 4 cut(s) 526, 660, 681, 1842
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 2 cut(s) 908, 1834
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 3 cut(s) 1225, 1668, 1948
SmlI CTYRAG 2 cut(s) 89, 1122
SmoI CTYRAG 2 cut(s) 89, 1122
SphI GCATGC 3 cut(s) 248, 535, 1647
SsiI CCGC 4 cut(s) 22, 25, 317, 1067
SspI AATATT 1 cut(s) 217
SspMI CTAG 2 cut(s) 1838, 1911
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 1 cut(s) 1945
StyI CCWWGG 1 cut(s) 1041
TaiI ACGT 3 cut(s) 299, 1583, 2037
TaqI TCGA 2 cut(s) 90, 1629
TatI WGTACW 2 cut(s) 1128, 1926
TauI GCSGC 2 cut(s) 27, 1070
TfiI GAWTC 5 cut(s) 11, 482, 676, 1363, 1468
Tru1I TTAA 5 cut(s) 585, 972, 1110, 1584, 1689
Tru9I TTAA 5 cut(s) 585, 972, 1110, 1584, 1689
TscAI CASTG 4 cut(s) 556, 1024, 1720, 1923
TseFI GTSAC 5 cut(s) 487, 606, 1015, 1168, 1621
TseI GCWGC 8 cut(s) 139, 1217, 1315, 1547, 1841, 1907, 2012, 2080
Tsp45I GTSAC 5 cut(s) 487, 606, 1015, 1168, 1621
TspRI CASTG 4 cut(s) 556, 1024, 1720, 1923
Tth111I GACNNNGTC 1 cut(s) 32
VpaK11BI GGWCC 2 cut(s) 908, 1834
VspI ATTAAT 1 cut(s) 1110
XapI RAATTY 6 cut(s) 557, 771, 1153, 1278, 1587, 1777
XceI RCATGY 4 cut(s) 248, 535, 1094, 1647
XcmI CCANNNNNNNNNTGG 2 cut(s) 1048, 1663
XhoI CTCGAG 1 cut(s) 89
XmnI GAANNNNTTC 4 cut(s) 188, 949, 1308, 1763
XspI CTAG 2 cut(s) 1838, 1911
Zsp2I ATGCAT 2 cut(s) 1109, 1649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.