Rh6DG294900

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0007909
Physical Location & Seq
Reverse (-)
49603785 .. 49610504
6720 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG294900.1

Sequence Viewer

Length: 1995 bp
ATGATTACATTAATCTCGTTAATTAAGCACCACCTCTCCGGCGGGAAATTCTCTCAAAACAAAAGAGGAAAAGGGCGCCACTCCACTCAAAAATTCCAGCACCCCGCTCTTTTCCCACTCGGGCAAAAACACTTCCGCCCTCCACGTGTCCCTCCCCACCTCCAAACCAATAGAAATCCGCCGCCTCATAAACACTCCACACTCTTCCACACCACCCCTTCACACGCTTCTCTCTCTCTCTCTGCACAGTTCCCAATGGCCCAGTCCTCCGCCAAGCACTCTTCAGATTCCGGAAACTGCCGCAACGGCGTCGTTTCGCCGATGAACAAGAACCCCCTCACGTTTCATCTCCAGAAGCTCGGCCTCGAGCTCACTTGCCCTCTCTGCCTAGGGTTTTTTAATCGGCCGACATTGCTTCCCTGCAATCACATCTTCTGCAACAACTGTGTGCCCAATGGGACCAATTTGGGAGCAGAGTGTCCTCTGTGTAATATCCAAGTTCCTGGTCAAGATCTGAGGCATGCGCCTTTCATGGAAAGCATAGTAGCAATCTACAAAAGCATGAAGGCCACTTACTGTACCAACTCCTCCCAGCCTATATATTCAGATGTTAGAACAGCTTCGGGTCAAAACCCGGTTTCACCTGATGTCAGTTTTGCTGGGAAATCGACTAAAGAACTGTTTGACAATTGCCAAGAGGGTAAATCAGAAAGTGCTCAGACCATTGTTTCATCAAGGGGTAATAAGCGAGTATGGGTTCCATGTAGTCAGAAACATTCTGTTACAGATGGAATTGGCAAGCATGGCAAAGTAGATAACTGTAGCATAGCAATAGATGGTAACAGCGAAGAATTCGAGTTGGGTAGAGGACGTAAATTTAATGGTGGATTAAATCCCAATTCACCATTACCAAGTTCTCAAATAAGATCTGTGGGACTGGACGAGTGTATGACTTCAGAAAGAGACATGAATCCAGTAGTGCAGGCGTTGCTGGATAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAATAGCTTTGACCAGTGCTCTGAGCAAATTTCAGACAGTTTGATCAGGGGGTCAATGAGGAAAATTGATGATAGAACAGGGCAGATGAGGCCTGATAGTTCTGCATCTGATACTGATGGCCATTTGAGGGAACTCAAGAGACAGAAGAAACTGGACTATGGGCCAGTCTCAGGGACTAATTCTGAGCTGGAACTTAAATTCAGAACACCTTCTAATGAGTCTTTCACAAATAACACCATTTGTGCATTTTGCCAGTCTTCCACAATCTCAGAGGTCACTGGGCCAATGTTGCACTATTCCAAGGGAAAATTGGTGGAGGGAGATGATGCAGCTGTTTCAGATGTCATACATGTTCACAAAATATGCATTGATTGGGCACCACAAGTGTTCTTTAAAGATGAAACCATTAAAAATTTGAAGGCGGAAGTGACAAGGGGTGCAAGATTAAAATGCACCAAATGTGGGATAAAGGGAGCAGCCTTGGGATGCTTTGTGAAATCCTGCCGAAGAAGCTATCATGTTACCTGTGCAATTGAAATTTCCAAGTGCCGTTGGGATTATGAAAGCTTTCTTCTGCTGTGTCCAGCACATTGTTCAGTTAAATTTCCCAATGAGAAGTTGAATCGTAACAAGCACAAAAATTGTCAGCTCTCCGACAGTAGAGTCGCTTCAAATGGAGTGAACAACTGGGTTTTATGCCCTTCTGGTTTGTCTTCTGAAGAGAAGATTTTTCTTATCAAATTTGCTGAGATGAATGGTGCAACTTTGTCCAAGAGCTGGACACCTGATGTTACACATGTGATTGCTGCCCTGGATGGGGATGGTGCATATGTCCGGACGTTTAAAATTTTCATGGCCATTTTGGCAGGAAAATGGATAGTGACAATTGACTGTAAGCGATACGTAGATATTCTACCTTGTTGCTTCAATACATTTTTCTGTGGATTATTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 PTCB-BRCT zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

664

Amino Acids

73.2

Weight (kDa)

8.85

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_2 PF13923 126 - 163 1.2e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 126 - 163 1.4e-06 Zinc finger, C3HC4 type (RING finger)
zf-HC5HC2H_2 PF13832 458 - 525 1.9e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 465 - 543 1.9e-09 PHD-like zinc-binding domain
BRCT PF00533 579 - 643 1.3e-06 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1700
AccB1I GGYRCC 2 cut(s) 75, 1414
AccB7I CCANNNNNTGG 1 cut(s) 1815
AccBSI CCGCTC 1 cut(s) 107
AccIII TCCGGA 2 cut(s) 290, 1872
AciI CCGC 8 cut(s) 42, 105, 136, 179, 182, 270, 301, 1460
AcoI YGGCCR 3 cut(s) 404, 1156, 1893
AcuI CTGAAG 3 cut(s) 267, 939, 1776
AcvI CACGTG 1 cut(s) 146
AcyI GRCGYC 2 cut(s) 76, 309
AfaI GTAC 1 cut(s) 580
AfiI CCNNNNNNNGG 7 cut(s) 1010, 1165, 1208, 1500, 1815, 1854, 1855
AflIII ACRYGT 3 cut(s) 145, 1387, 1834
AgsI TTSAA 5 cut(s) 1456, 1574, 1660, 1710, 1966
AjnI CCWGG 2 cut(s) 502, 1848
Alw21I GWGCWC 3 cut(s) 372, 718, 1058
Alw26I GTCTC 3 cut(s) 957, 1171, 1210
Ama87I CYCGRG 2 cut(s) 119, 365
Aor13HI TCCGGA 2 cut(s) 290, 1872
AoxI GGCC 9 cut(s) 258, 361, 404, 567, 1127, 1156, 1199, 1319, 1893
ApeKI GCWGC 3 cut(s) 1367, 1514, 1844
AseI ATTAAT 1 cut(s) 11
Asp700I GAANNNNTTC 3 cut(s) 619, 1246, 1605
AspA2I CCTAGG 1 cut(s) 388
AspLEI GCGC 2 cut(s) 78, 526
AspS9I GGNCC 4 cut(s) 259, 459, 1199, 1319
AsuC2I CCSGG 1 cut(s) 635
AsuHPI GGTGA 3 cut(s) 633, 894, 1025
AvaI CYCGRG 2 cut(s) 119, 365
AvaII GGWCC 1 cut(s) 459
AvrII CCTAGG 1 cut(s) 388
BaeGI GKGCMC 2 cut(s) 453, 1417
BalI TGGCCA 2 cut(s) 1158, 1895
BanI GGYRCC 2 cut(s) 75, 1414
BanII GRGCYC 1 cut(s) 372
BarI GAAGNNNNNNTAC 4 cut(s) 557, 589, 1690, 1722
BbrPI CACGTG 1 cut(s) 146
BbsI GAAGAC 2 cut(s) 1287, 1743
Bbv12I GWGCWC 3 cut(s) 372, 718, 1058
BbvI GCAGC 3 cut(s) 1379, 1526, 1831
BccI CCATC 5 cut(s) 782, 830, 1148, 1847, 1853
BceAI ACGGC 2 cut(s) 322, 1572
BcgI CGANNNNNNTGC 2 cut(s) 292, 326
BciT130I CCWGG 2 cut(s) 504, 1850
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 1 cut(s) 635
BcoDI GTCTC 3 cut(s) 957, 1171, 1210
BfaI CTAG 1 cut(s) 389
BfmI CTRYAG 1 cut(s) 820
BfoI RGCGCY 1 cut(s) 79
BglI GCCNNNNNGGC 2 cut(s) 306, 1901
BglII AGATCT 2 cut(s) 511, 926
BisI GCNGC 5 cut(s) 182, 301, 1368, 1515, 1845
BlnI CCTAGG 1 cut(s) 388
BlsI GCNGC 5 cut(s) 183, 302, 1369, 1516, 1846
Bme1390I CCNGG 3 cut(s) 504, 635, 1850
Bme18I GGWCC 1 cut(s) 459
BmeT110I CYCGRG 2 cut(s) 119, 365
BmgT120I GGNCC 4 cut(s) 259, 459, 1199, 1319
BmiI GGNNCC 4 cut(s) 77, 460, 759, 1416
BmrFI CCNGG 3 cut(s) 504, 635, 1850
BmrI ACTGGG 3 cut(s) 256, 1326, 1735
BmsI GCATC 4 cut(s) 1006, 1151, 1354, 1514
BmuI ACTGGG 3 cut(s) 256, 1326, 1735
BpiI GAAGAC 2 cut(s) 1287, 1743
BpmI CTGGAG 1 cut(s) 335
BpuEI CTTGAG 1 cut(s) 1157
BpuMI CCSGG 1 cut(s) 635
BsaAI YACGTR 2 cut(s) 146, 1942
BsaHI GRCGYC 2 cut(s) 76, 309
BsaJI CCNNGG 4 cut(s) 388, 1338, 1518, 1848
BsaWI WCCGGW 2 cut(s) 290, 1872
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 7 cut(s) 1010, 1165, 1208, 1500, 1815, 1854, 1855
Bse1I ACTGG 9 cut(s) 262, 942, 974, 1051, 1194, 1202, 1291, 1321, 1730
Bse3DI GCAATG 1 cut(s) 410
BseAI TCCGGA 2 cut(s) 290, 1872
BseBI CCWGG 2 cut(s) 504, 1850
BseDI CCNNGG 4 cut(s) 388, 1338, 1518, 1848
BseGI GGATG 3 cut(s) 1529, 1858, 1864
BseLI CCNNNNNNNGG 7 cut(s) 1010, 1165, 1208, 1500, 1815, 1854, 1855
BseMI GCAATG 1 cut(s) 410
BseMII CTCAG 7 cut(s) 506, 731, 1050, 1212, 1221, 1320, 1776
BseNI ACTGG 9 cut(s) 262, 942, 974, 1051, 1194, 1202, 1291, 1321, 1730
BseRI GAGGAG 1 cut(s) 577
BseSI GKGCMC 2 cut(s) 453, 1417
BseX3I CGGCCG 1 cut(s) 404
BseXI GCAGC 3 cut(s) 1379, 1526, 1831
BseYI CCCAGC 2 cut(s) 591, 659
BsgI GTGCAG 2 cut(s) 228, 1001
Bsh1285I CGRYCG 1 cut(s) 407
BshFI GGCC 9 cut(s) 260, 363, 406, 569, 1129, 1158, 1201, 1321, 1895
BshNI GGYRCC 2 cut(s) 75, 1414
BsiEI CGRYCG 1 cut(s) 407
BsiHKAI GWGCWC 3 cut(s) 372, 718, 1058
BsiHKCI CYCGRG 2 cut(s) 119, 365
BsiSI CCGG 4 cut(s) 39, 291, 635, 1873
BslFI GGGAC 4 cut(s) 134, 472, 948, 1225
BslI CCNNNNNNNGG 7 cut(s) 1010, 1165, 1208, 1500, 1815, 1854, 1855
BsmAI GTCTC 3 cut(s) 957, 1171, 1210
BsmFI GGGAC 4 cut(s) 134, 472, 948, 1225
BsnI GGCC 9 cut(s) 260, 363, 406, 569, 1129, 1158, 1201, 1321, 1895
BsoBI CYCGRG 2 cut(s) 119, 365
Bsp1286I GDGCHC 5 cut(s) 372, 453, 718, 1058, 1417
Bsp13I TCCGGA 2 cut(s) 290, 1872
Bsp143I GATC 3 cut(s) 511, 926, 1080
BspACI CCGC 8 cut(s) 42, 105, 136, 179, 182, 270, 301, 1460
BspANI GGCC 9 cut(s) 260, 363, 406, 569, 1129, 1158, 1201, 1321, 1895
BspCNI CTCAG 7 cut(s) 507, 730, 1051, 1213, 1220, 1319, 1777
BspEI TCCGGA 2 cut(s) 290, 1872
BspLI GGNNCC 4 cut(s) 77, 460, 759, 1416
BspT107I GGYRCC 2 cut(s) 75, 1414
BsrBI CCGCTC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 410
BsrI ACTGG 9 cut(s) 262, 942, 974, 1051, 1194, 1202, 1291, 1321, 1730
BssECI CCNNGG 4 cut(s) 388, 1338, 1518, 1848
BssMI GATC 3 cut(s) 511, 926, 1080
BssNI GRCGYC 2 cut(s) 76, 309
BssT1I CCWWGG 3 cut(s) 388, 1338, 1518
Bst2UI CCWGG 2 cut(s) 504, 1850
Bst4CI ACNGT 8 cut(s) 249, 446, 578, 681, 821, 1076, 1697, 1931
Bst6I CTCTTC 3 cut(s) 209, 286, 1752
BstACI GRCGYC 2 cut(s) 76, 309
BstAPI GCANNNNNTGC 1 cut(s) 988
BstBAI YACGTR 2 cut(s) 146, 1942
BstC8I GCNNGC 3 cut(s) 522, 800, 984
BstDEI CTNAG 7 cut(s) 515, 717, 1059, 1207, 1221, 1306, 1785
BstF5I GGATG 3 cut(s) 1529, 1858, 1864
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 2 cut(s) 78, 526
BstKTI GATC 3 cut(s) 514, 929, 1083
BstMAI GTCTC 3 cut(s) 957, 1171, 1210
BstMBI GATC 3 cut(s) 511, 926, 1080
BstMCI CGRYCG 1 cut(s) 407
BstMWI GCNNNNNNNGC 9 cut(s) 306, 384, 412, 804, 988, 1126, 1327, 1548, 1901
BstNI CCWGG 2 cut(s) 504, 1850
BstNSI RCATGY 3 cut(s) 524, 1391, 1838
BstSCI CCNGG 3 cut(s) 502, 633, 1848
BstSFI CTRYAG 1 cut(s) 820
BstSLI GKGCMC 2 cut(s) 453, 1417
BstSNI TACGTA 1 cut(s) 1942
BstV1I GCAGC 3 cut(s) 1379, 1526, 1831
BstV2I GAAGAC 2 cut(s) 1287, 1743
BstX2I RGATCY 2 cut(s) 511, 926
BstXI CCANNNNNNTGG 1 cut(s) 503
BstYI RGATCY 2 cut(s) 511, 926
BstZI CGGCCG 1 cut(s) 404
BsuRI GGCC 9 cut(s) 260, 363, 406, 569, 1129, 1158, 1201, 1321, 1895
BtsCI GGATG 3 cut(s) 1529, 1858, 1864
BtsIMutI CAGTG 2 cut(s) 1058, 1314
Cac8I GCNNGC 3 cut(s) 522, 800, 984
CfoI GCGC 2 cut(s) 78, 526
Cfr13I GGNCC 4 cut(s) 259, 459, 1199, 1319
CseI GACGC 1 cut(s) 298
Csp6I GTAC 1 cut(s) 579
CviQI GTAC 1 cut(s) 579
DdeI CTNAG 7 cut(s) 515, 717, 1059, 1207, 1221, 1306, 1785
DinI GGCGCC 1 cut(s) 77
DpnI GATC 3 cut(s) 513, 928, 1082
DpnII GATC 3 cut(s) 511, 926, 1080
DraI TTTAAA 2 cut(s) 1432, 1882
DrdI GACNNNNNNGTC 1 cut(s) 1700
DseDI GACNNNNNNGTC 1 cut(s) 1700
EaeI YGGCCR 3 cut(s) 404, 1156, 1893
EagI CGGCCG 1 cut(s) 404
Eam1104I CTCTTC 3 cut(s) 209, 286, 1752
EarI CTCTTC 3 cut(s) 209, 286, 1752
EciI GGCGGA 4 cut(s) 125, 168, 259, 1475
Ecl136II GAGCTC 1 cut(s) 370
EclXI CGGCCG 1 cut(s) 404
Eco105I TACGTA 1 cut(s) 1942
Eco130I CCWWGG 3 cut(s) 388, 1338, 1518
Eco147I AGGCCT 1 cut(s) 1129
Eco24I GRGCYC 1 cut(s) 372
Eco47I GGWCC 1 cut(s) 459
Eco52I CGGCCG 1 cut(s) 404
Eco53kI GAGCTC 1 cut(s) 370
Eco57I CTGAAG 3 cut(s) 267, 939, 1776
Eco72I CACGTG 1 cut(s) 146
Eco88I CYCGRG 2 cut(s) 119, 365
EcoICRI GAGCTC 1 cut(s) 370
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 2 cut(s) 502, 1848
EcoT14I CCWWGG 3 cut(s) 388, 1338, 1518
EcoT22I ATGCAT 1 cut(s) 1406
EcoT38I GRGCYC 1 cut(s) 372
EgeI GGCGCC 1 cut(s) 77
EheI GGCGCC 1 cut(s) 77
ErhI CCWWGG 3 cut(s) 388, 1338, 1518
FaqI GGGAC 4 cut(s) 134, 472, 948, 1225
FauI CCCGC 2 cut(s) 35, 112
FauNDI CATATG 1 cut(s) 1867
FbaI TGATCA 1 cut(s) 1080
Fnu4HI GCNGC 5 cut(s) 182, 301, 1368, 1515, 1845
FokI GGATG 3 cut(s) 1536, 1865, 1871
FriOI GRGCYC 1 cut(s) 372
Fsp4HI GCNGC 5 cut(s) 182, 301, 1368, 1515, 1845
FspBI CTAG 1 cut(s) 389
GlaI GCGC 2 cut(s) 77, 525
GluI GCNGC 5 cut(s) 182, 301, 1368, 1515, 1845
GsaI CCCAGC 2 cut(s) 595, 663
GsuI CTGGAG 1 cut(s) 335
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 9 cut(s) 260, 363, 406, 569, 1129, 1158, 1201, 1321, 1895
HapII CCGG 4 cut(s) 39, 291, 635, 1873
HgaI GACGC 1 cut(s) 298
HhaI GCGC 2 cut(s) 78, 526
Hin1I GRCGYC 2 cut(s) 76, 309
Hin6I GCGC 2 cut(s) 76, 524
HinP1I GCGC 2 cut(s) 76, 524
HindIII AAGCTT 1 cut(s) 1603
HinfI GANTC 5 cut(s) 287, 970, 1256, 1660, 1701
HpaII CCGG 4 cut(s) 39, 291, 635, 1873
HphI GGTGA 3 cut(s) 633, 894, 1025
Hpy166II GTNNAC 2 cut(s) 1393, 1720
Hpy188III TCNNGA 5 cut(s) 291, 352, 509, 1174, 1873
Hpy8I GTNNAC 2 cut(s) 1393, 1720
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 6 cut(s) 228, 559, 1014, 1257, 1450, 1749
HpyCH4III ACNGT 8 cut(s) 249, 446, 578, 681, 821, 1076, 1697, 1931
HpyCH4IV ACGT 5 cut(s) 145, 341, 871, 1877, 1941
HpyF10VI GCNNNNNNNGC 9 cut(s) 306, 384, 412, 804, 988, 1126, 1327, 1548, 1901
HpyF3I CTNAG 7 cut(s) 515, 717, 1059, 1207, 1221, 1306, 1785
HpySE526I ACGT 5 cut(s) 145, 341, 871, 1877, 1941
Hsp92I GRCGYC 2 cut(s) 76, 309
HspAI GCGC 2 cut(s) 76, 524
KasI GGCGCC 1 cut(s) 75
Kpn2I TCCGGA 2 cut(s) 290, 1872
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 3 cut(s) 511, 926, 1080
LmnI GCTCC 2 cut(s) 470, 1511
Lsp1109I GCAGC 3 cut(s) 1379, 1526, 1831
LweI GCATC 4 cut(s) 1006, 1151, 1354, 1514
MaeI CTAG 1 cut(s) 389
MaeII ACGT 5 cut(s) 145, 341, 871, 1877, 1941
MaeIII GTNAC 8 cut(s) 781, 839, 1312, 1465, 1558, 1664, 1828, 1918
MalI GATC 3 cut(s) 513, 928, 1082
MbiI CCGCTC 1 cut(s) 107
MboI GATC 3 cut(s) 511, 926, 1080
MfeI CAATTG 3 cut(s) 688, 1569, 1923
MflI RGATCY 2 cut(s) 511, 926
MhlI GDGCHC 5 cut(s) 372, 453, 718, 1058, 1417
MlsI TGGCCA 2 cut(s) 1158, 1895
MluNI TGGCCA 2 cut(s) 1158, 1895
Mly113I GGCGCC 1 cut(s) 76
MlyI GAGTC 2 cut(s) 1265, 1710
MmeI TCCRAC 1 cut(s) 1716
Mox20I TGGCCA 2 cut(s) 1158, 1895
Mph1103I ATGCAT 1 cut(s) 1406
MroI TCCGGA 2 cut(s) 290, 1872
MroXI GAANNNNTTC 3 cut(s) 619, 1246, 1605
MscI TGGCCA 2 cut(s) 1158, 1895
Msp20I TGGCCA 2 cut(s) 1158, 1895
MspA1I CMGCKG 1 cut(s) 1370
MspI CCGG 4 cut(s) 39, 291, 635, 1873
MspR9I CCNGG 3 cut(s) 504, 635, 1850
MunI CAATTG 3 cut(s) 688, 1569, 1923
MvaI CCWGG 2 cut(s) 504, 1850
MwoI GCNNNNNNNGC 9 cut(s) 306, 384, 412, 804, 988, 1126, 1327, 1548, 1901
NarI GGCGCC 1 cut(s) 76
NciI CCSGG 1 cut(s) 635
NdeI CATATG 1 cut(s) 1867
NdeII GATC 3 cut(s) 511, 926, 1080
NlaIV GGNNCC 4 cut(s) 77, 460, 759, 1416
NmeAIII GCCGAG 1 cut(s) 339
NmuCI GTSAC 3 cut(s) 1312, 1465, 1918
NsiI ATGCAT 1 cut(s) 1406
NspI RCATGY 3 cut(s) 524, 1391, 1838
PacI TTAATTAA 1 cut(s) 24
PaeI GCATGC 1 cut(s) 524
PaeR7I CTCGAG 1 cut(s) 365
PceI AGGCCT 1 cut(s) 1129
PciI ACATGT 2 cut(s) 1387, 1834
PdmI GAANNNNTTC 3 cut(s) 619, 1246, 1605
PfeI GAWTC 3 cut(s) 287, 970, 1660
PflMI CCANNNNNTGG 1 cut(s) 1815
PkrI GCNGC 5 cut(s) 183, 302, 1369, 1516, 1846
PleI GAGTC 2 cut(s) 1264, 1709
PluTI GGCGCC 1 cut(s) 79
PmaCI CACGTG 1 cut(s) 146
PmlI CACGTG 1 cut(s) 146
PpsI GAGTC 2 cut(s) 1264, 1709
Ppu21I YACGTR 2 cut(s) 146, 1942
PscI ACATGT 2 cut(s) 1387, 1834
PshBI ATTAAT 1 cut(s) 11
Psp124BI GAGCTC 1 cut(s) 372
Psp6I CCWGG 2 cut(s) 502, 1848
PspCI CACGTG 1 cut(s) 146
PspFI CCCAGC 2 cut(s) 591, 659
PspGI CCWGG 2 cut(s) 502, 1848
PspN4I GGNNCC 4 cut(s) 77, 460, 759, 1416
PspPI GGNCC 4 cut(s) 259, 459, 1199, 1319
PspXI VCTCGAGB 1 cut(s) 365
PsuI RGATCY 2 cut(s) 511, 926
PvuII CAGCTG 1 cut(s) 1370
RsaI GTAC 1 cut(s) 580
RsaNI GTAC 1 cut(s) 579
SacI GAGCTC 1 cut(s) 372
SatI GCNGC 5 cut(s) 182, 301, 1368, 1515, 1845
Sau3AI GATC 3 cut(s) 511, 926, 1080
Sau96I GGNCC 4 cut(s) 259, 459, 1199, 1319
SchI GAGTC 2 cut(s) 1265, 1710
ScrFI CCNGG 3 cut(s) 504, 635, 1850
SduI GDGCHC 5 cut(s) 372, 453, 718, 1058, 1417
SfaNI GCATC 4 cut(s) 1006, 1151, 1354, 1514
SfcI CTRYAG 1 cut(s) 820
SfoI GGCGCC 1 cut(s) 77
Sfr274I CTCGAG 1 cut(s) 365
SinI GGWCC 1 cut(s) 459
SlaI CTCGAG 1 cut(s) 365
SmlI CTYRAG 2 cut(s) 365, 1172
SmoI CTYRAG 2 cut(s) 365, 1172
SnaBI TACGTA 1 cut(s) 1942
SphI GCATGC 1 cut(s) 524
SseBI AGGCCT 1 cut(s) 1129
SsiI CCGC 8 cut(s) 42, 105, 136, 179, 182, 270, 301, 1460
SspDI GGCGCC 1 cut(s) 75
SspMI CTAG 1 cut(s) 389
SstI GAGCTC 1 cut(s) 372
StuI AGGCCT 1 cut(s) 1129
StyD4I CCNGG 3 cut(s) 502, 633, 1848
StyI CCWWGG 3 cut(s) 388, 1338, 1518
TaaI ACNGT 8 cut(s) 249, 446, 578, 681, 821, 1076, 1697, 1931
TaiI ACGT 5 cut(s) 148, 344, 874, 1880, 1944
TaqI TCGA 3 cut(s) 366, 668, 855
TauI GCSGC 2 cut(s) 184, 303
TfiI GAWTC 3 cut(s) 287, 970, 1660
TscAI CASTG 2 cut(s) 1058, 1321
TseFI GTSAC 3 cut(s) 1312, 1465, 1918
TseI GCWGC 3 cut(s) 1367, 1514, 1844
Tsp45I GTSAC 3 cut(s) 1312, 1465, 1918
TspRI CASTG 2 cut(s) 1058, 1321
Van91I CCANNNNNTGG 1 cut(s) 1815
VpaK11BI GGWCC 1 cut(s) 459
VspI ATTAAT 1 cut(s) 11
XceI RCATGY 3 cut(s) 524, 1391, 1838
XcmI CCANNNNNNNNNTGG 1 cut(s) 1345
XhoI CTCGAG 1 cut(s) 365
XmaJI CCTAGG 1 cut(s) 388
XmnI GAANNNNTTC 3 cut(s) 619, 1246, 1605
XspI CTAG 1 cut(s) 389
Zsp2I ATGCAT 1 cut(s) 1406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.