Rh6BG303200

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0007909
Physical Location & Seq
Reverse (-)
53365077 .. 53371425
6349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG303200.1

Sequence Viewer

Length: 2127 bp
ATGGCCAAGCACTCTTCAGATTCCGGAAACTGCCGCGACGGCGTCGTTTCGCCGATGAGCAAGAACCCCCTCACGTTTCATCTCCAGAAGCTCGGCCTCGAGCTCACTTGCCCTCTCTGCCTAGGGTTTTTTAATCGGCCGACATTGCTTCCCTGCAATCACATCTTCTGCAACAACTGTGTGCCCAATCGGACCAATTTTGGAGCAGAGTGTCCTCTGTGTAATATCCAAGTTCCTGCTCAAGATCTGAGGCATGCGCCTTTCATGGAAAGCATAGTAGCAATCTACAAAAGCATGAAGGCCACTTACTGTACCAACTCCTCCCAGCCTATATCTTCAGATGTTAGAACAGCTTCGGGTCAAAACCTGGTTTCACCTGATGTCAGTTTTGCTGGGAAATCGACTAAAGAACCGTTTGACAATTGCCAAGAGGGTAAATCAGAAAGTGCTCAGACCATTGTTTCATCAAGGGGTAATAAGCGAGTATGGGTTCCATGTAGTCAGAAACATTCTGTTACAGATGGAATTGGCAAGCATGGCAAAGTAGATAACTGTAGCATAGCAATAGATGGTAACAGCGAAGAATTCGAGTTGGGTAGAGGACGTAAATTTAATGGTGGATTAAATCCCAATTCACCATTACCAAGTTCTCAAATAAGATCTGTGGGACTGGACGAGTGTATGACTTCAGAAAGAGACATGAATCGAGTAGTGCAGGCGTTGCTGGATAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAATAGCTTTGACCAGTGCTCTGAGCAAATTTCAGACAGTTTGATCAGGGGGTCAATGAGGAAAATTGATGATAGAACAGGGCAGATGAGGCCTGATAGTTCTGCATCTGATACTGATGGCCATTTGAGGGAACTCAAGAGACAGAAGAAACTGGACTATGGGCCAGTCTCAGGGACTAATTCTGAGCTGGAACTTAAATTCAGAACACCTTCTAATGAGTCTTTCACAAATAACACCATTTGTGCATTTTGCCAGTCTTCCACAATCTCAGAGGTCACTGGGCCAATGTTGCACTATTCCAAGGGAAAATTGGTGGAGGGAGATGAGGCAGCTGTTTCAGATGTCATACATGTTCACAAAATATGCATTGATTGGGCACCACAAGTGTTCTTTACAGATGAAACCATTAAAAATTTGAAGGCGGAAGTGACAAGGGGTGCAAGATTAAAATGCACCAAATGTGGGATAAAGGGAGCAGCCTTGGGATGCTTTGTGAAATCCTGCCGAAGAAGCTATCATGTTACCTGTGCAATTGAAATTTCTAAGTGCCGTTGGGATTATGAAAGCTTTCTTCTGCTGTGTCCAGCACATTGTTCAGTTAAATTTCCCAATGAGAAGTTGAATCGTAACAAGCACAAAAATTGTCAGCTCTCCGACAGTAGAGTCGCTTCAAATGGAGTGAACAACTGGGTTTTATGCCCTTCTGGTTTGTCTTCTGAAGAGAAGATTTTTCTTATCAAATTTGCTGAGATGAATGGTGCAACTTTGTCCAAGAGCTGGACACCTGATGTTACACATGTGATTGCTGCCCTGGATGGGGATGGTGCATATGTCCGGACGTTTAAAATTTTCATGGCCATTTTGGCAGGAAAATGGATAGTGACAATTGACTGGGTAAAAGCATGTATGGAAACTAAGCATCATGTGGATGAAGAACCTTATGAAGTTAGTCTTGATAACTATGGTTGTCGCAGTGGTGCCAAAGCTGGCAGGCTTAGGGCATTAAGCAATGATCCGAAGCTCTTTAATGGTTTGAATTTCTATTTTGCTGGTGATTTTATACTGGAACGGAAGGAAGACTACAAAGAATTGGTCATAGCTGCAGGAGGTACTGTTTTCAACAGTAAGGAAGATGTGCTTGAAGCAAGTTGTCATGAAAAGGGAACTTCCAGGACACTAGTTGTGTACAACCTTGACCCCCCACCAGGGTGCAAGTTGGGGGAAGAAGTTTCAATACTTTGGCAAAGCTCTAACGAGGCACAAGATATAGCTGCGAAAATTGGAGCTGAATACGTCTTTCACACATGGTTGTTGGAGTCAATTGCGAGATATGAGTTGCAGCCAATTGTATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

708

Amino Acids

78.11

Weight (kDa)

6.66

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_6 PF14835 34 - 86 9e-06 zf-RING of BARD1-type protein
zf-C3HC4 PF00097 37 - 74 2.3e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 37 - 74 2.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-HC5HC2H_2 PF13832 369 - 436 2.1e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 376 - 454 2.5e-09 PHD-like zinc-binding domain
BRCT PF00533 490 - 560 1.5e-10 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1433
AccB1I GGYRCC 2 cut(s) 1147, 1748
AccB7I CCANNNNNTGG 1 cut(s) 1548
AccII CGCG 1 cut(s) 36
AccIII TCCGGA 2 cut(s) 23, 1605
AciI CCGC 2 cut(s) 34, 1193
AclWI GGATC 1 cut(s) 1778
AcoI YGGCCR 4 cut(s) 3, 137, 889, 1626
AcuI CTGAAG 3 cut(s) 321, 672, 1509
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 3 cut(s) 313, 1882, 1958
AfiI CCNNNNNNNGG 9 cut(s) 743, 898, 941, 1233, 1548, 1587, 1588, 1976, 1977
AflIII ACRYGT 2 cut(s) 1120, 1567
AgsI TTSAA 8 cut(s) 1189, 1307, 1393, 1443, 1807, 1891, 1913, 2004
AhlI ACTAGT 1 cut(s) 1948
AjnI CCWGG 4 cut(s) 366, 1581, 1940, 1975
AleI CACNNNNGTG 1 cut(s) 1978
Alw21I GWGCWC 3 cut(s) 105, 451, 791
Alw26I GTCTC 3 cut(s) 690, 904, 943
AlwI GGATC 1 cut(s) 1778
Ama87I CYCGRG 1 cut(s) 98
Aor13HI TCCGGA 2 cut(s) 23, 1605
AoxI GGCC 9 cut(s) 3, 94, 137, 300, 860, 889, 932, 1052, 1626
ApeKI GCWGC 6 cut(s) 1100, 1247, 1577, 1871, 2042, 2110
ArsI GACNNNNNNTTYG 2 cut(s) 1848, 1880
Asp700I GAANNNNTTC 3 cut(s) 352, 979, 1338
AspA2I CCTAGG 1 cut(s) 121
AspLEI GCGC 1 cut(s) 259
AspS9I GGNCC 3 cut(s) 192, 932, 1052
AsuHPI GGTGA 4 cut(s) 366, 627, 758, 1835
AvaI CYCGRG 1 cut(s) 98
AvaII GGWCC 1 cut(s) 192
AvrII CCTAGG 1 cut(s) 121
BaeGI GKGCMC 2 cut(s) 186, 1150
BalI TGGCCA 3 cut(s) 5, 891, 1628
BanI GGYRCC 2 cut(s) 1147, 1748
BanII GRGCYC 1 cut(s) 105
BarI GAAGNNNNNNTAC 8 cut(s) 290, 322, 1423, 1455, 1835, 1867, 1989, 2021
BbsI GAAGAC 3 cut(s) 1020, 1476, 1854
Bbv12I GWGCWC 3 cut(s) 105, 451, 791
BbvI GCAGC 6 cut(s) 1112, 1259, 1564, 1858, 2029, 2122
BccI CCATC 5 cut(s) 515, 563, 881, 1580, 1586
BceAI ACGGC 2 cut(s) 55, 1305
BciT130I CCWGG 4 cut(s) 368, 1583, 1942, 1977
BclI TGATCA 1 cut(s) 813
BcoDI GTCTC 3 cut(s) 690, 904, 943
BcuI ACTAGT 1 cut(s) 1948
BfaI CTAG 2 cut(s) 122, 1949
BfmI CTRYAG 2 cut(s) 553, 1872
BglI GCCNNNNNGGC 2 cut(s) 39, 1634
BglII AGATCT 2 cut(s) 244, 659
BisI GCNGC 7 cut(s) 34, 1101, 1248, 1578, 1872, 2043, 2111
BlnI CCTAGG 1 cut(s) 121
BlsI GCNGC 7 cut(s) 35, 1102, 1249, 1579, 1873, 2044, 2112
Bme1390I CCNGG 4 cut(s) 368, 1583, 1942, 1977
Bme18I GGWCC 1 cut(s) 192
BmeT110I CYCGRG 1 cut(s) 98
BmgT120I GGNCC 3 cut(s) 192, 932, 1052
BmiI GGNNCC 3 cut(s) 492, 1149, 1750
BmrFI CCNGG 4 cut(s) 368, 1583, 1942, 1977
BmrI ACTGGG 3 cut(s) 1059, 1468, 1672
BmsI GCATC 4 cut(s) 739, 884, 1247, 1699
BmuI ACTGGG 3 cut(s) 1059, 1468, 1672
BpiI GAAGAC 3 cut(s) 1020, 1476, 1854
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 1 cut(s) 1766
BpuEI CTTGAG 2 cut(s) 225, 890
BsaHI GRCGYC 1 cut(s) 42
BsaJI CCNNGG 5 cut(s) 121, 1071, 1251, 1581, 1976
BsaWI WCCGGW 2 cut(s) 23, 1605
BsaXI ACNNNNNCTCC 2 cut(s) 1869, 1899
Bsc4I CCNNNNNNNGG 9 cut(s) 743, 898, 941, 1233, 1548, 1587, 1588, 1976, 1977
Bse1I ACTGG 9 cut(s) 675, 784, 927, 935, 1024, 1054, 1463, 1667, 1839
Bse3DI GCAATG 2 cut(s) 143, 1786
BseAI TCCGGA 2 cut(s) 23, 1605
BseBI CCWGG 4 cut(s) 368, 1583, 1942, 1977
BseDI CCNNGG 5 cut(s) 121, 1071, 1251, 1581, 1976
BseGI GGATG 4 cut(s) 1262, 1591, 1597, 1705
BseLI CCNNNNNNNGG 9 cut(s) 743, 898, 941, 1233, 1548, 1587, 1588, 1976, 1977
BseMI GCAATG 2 cut(s) 143, 1786
BseMII CTCAG 7 cut(s) 239, 464, 783, 945, 954, 1053, 1509
BseNI ACTGG 9 cut(s) 675, 784, 927, 935, 1024, 1054, 1463, 1667, 1839
BseRI GAGGAG 1 cut(s) 310
BseSI GKGCMC 2 cut(s) 186, 1150
BseX3I CGGCCG 1 cut(s) 137
BseXI GCAGC 6 cut(s) 1112, 1259, 1564, 1858, 2029, 2122
BseYI CCCAGC 2 cut(s) 324, 392
BsgI GTGCAG 1 cut(s) 734
Bsh1236I CGCG 1 cut(s) 36
Bsh1285I CGRYCG 1 cut(s) 140
BshFI GGCC 9 cut(s) 5, 96, 139, 302, 862, 891, 934, 1054, 1628
BshNI GGYRCC 2 cut(s) 1147, 1748
BsiEI CGRYCG 1 cut(s) 140
BsiHKAI GWGCWC 3 cut(s) 105, 451, 791
BsiHKCI CYCGRG 1 cut(s) 98
BsiSI CCGG 2 cut(s) 24, 1606
BslFI GGGAC 2 cut(s) 681, 958
BslI CCNNNNNNNGG 9 cut(s) 743, 898, 941, 1233, 1548, 1587, 1588, 1976, 1977
BsmAI GTCTC 3 cut(s) 690, 904, 943
BsmFI GGGAC 2 cut(s) 681, 958
BsnI GGCC 9 cut(s) 5, 96, 139, 302, 862, 891, 934, 1054, 1628
BsoBI CYCGRG 1 cut(s) 98
Bsp1286I GDGCHC 5 cut(s) 105, 186, 451, 791, 1150
Bsp13I TCCGGA 2 cut(s) 23, 1605
Bsp1407I TGTACA 1 cut(s) 1956
Bsp143I GATC 4 cut(s) 244, 659, 813, 1783
BspACI CCGC 2 cut(s) 34, 1193
BspANI GGCC 9 cut(s) 5, 96, 139, 302, 862, 891, 934, 1054, 1628
BspCNI CTCAG 7 cut(s) 240, 463, 784, 946, 953, 1052, 1510
BspEI TCCGGA 2 cut(s) 23, 1605
BspFNI CGCG 1 cut(s) 36
BspHI TCATGA 1 cut(s) 1924
BspLI GGNNCC 3 cut(s) 492, 1149, 1750
BspMAI CTGCAG 1 cut(s) 1876
BspPI GGATC 1 cut(s) 1778
BspT107I GGYRCC 2 cut(s) 1147, 1748
BsrDI GCAATG 2 cut(s) 143, 1786
BsrGI TGTACA 1 cut(s) 1956
BsrI ACTGG 9 cut(s) 675, 784, 927, 935, 1024, 1054, 1463, 1667, 1839
BssECI CCNNGG 5 cut(s) 121, 1071, 1251, 1581, 1976
BssMI GATC 4 cut(s) 244, 659, 813, 1783
BssNI GRCGYC 1 cut(s) 42
BssT1I CCWWGG 3 cut(s) 121, 1071, 1251
Bst2UI CCWGG 4 cut(s) 368, 1583, 1942, 1977
Bst4CI ACNGT 8 cut(s) 179, 311, 414, 554, 809, 1430, 1885, 1895
Bst6I CTCTTC 2 cut(s) 19, 1485
BstACI GRCGYC 1 cut(s) 42
BstAPI GCANNNNNTGC 1 cut(s) 721
BstAUI TGTACA 1 cut(s) 1956
BstC8I GCNNGC 5 cut(s) 255, 533, 717, 1759, 1763
BstF5I GGATG 4 cut(s) 1262, 1591, 1597, 1705
BstFNI CGCG 1 cut(s) 36
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 4 cut(s) 247, 662, 816, 1786
BstMAI GTCTC 3 cut(s) 690, 904, 943
BstMBI GATC 4 cut(s) 244, 659, 813, 1783
BstMCI CGRYCG 1 cut(s) 140
BstMWI GCNNNNNNNGC 9 cut(s) 39, 117, 145, 537, 721, 859, 1060, 1281, 1634
BstNI CCWGG 4 cut(s) 368, 1583, 1942, 1977
BstNSI RCATGY 4 cut(s) 257, 1124, 1571, 1677
BstSCI CCNGG 4 cut(s) 366, 1581, 1940, 1975
BstSFI CTRYAG 2 cut(s) 553, 1872
BstSLI GKGCMC 2 cut(s) 186, 1150
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 6 cut(s) 1112, 1259, 1564, 1858, 2029, 2122
BstV2I GAAGAC 3 cut(s) 1020, 1476, 1854
BstX2I RGATCY 2 cut(s) 244, 659
BstYI RGATCY 2 cut(s) 244, 659
BstZI CGGCCG 1 cut(s) 137
BsuRI GGCC 9 cut(s) 5, 96, 139, 302, 862, 891, 934, 1054, 1628
BtsCI GGATG 4 cut(s) 1262, 1591, 1597, 1705
BtsI GCAGTG 1 cut(s) 1750
BtsIMutI CAGTG 3 cut(s) 791, 1047, 1750
Cac8I GCNNGC 5 cut(s) 255, 533, 717, 1759, 1763
CciI TCATGA 1 cut(s) 1924
CfoI GCGC 1 cut(s) 259
Cfr13I GGNCC 3 cut(s) 192, 932, 1052
CseI GACGC 1 cut(s) 31
CsiI ACCWGGT 1 cut(s) 366
Csp6I GTAC 3 cut(s) 312, 1881, 1957
CviQI GTAC 3 cut(s) 312, 1881, 1957
DpnI GATC 4 cut(s) 246, 661, 815, 1785
DpnII GATC 4 cut(s) 244, 659, 813, 1783
DraI TTTAAA 1 cut(s) 1615
DrdI GACNNNNNNGTC 1 cut(s) 1433
DseDI GACNNNNNNGTC 1 cut(s) 1433
EaeI YGGCCR 4 cut(s) 3, 137, 889, 1626
EagI CGGCCG 1 cut(s) 137
Eam1104I CTCTTC 2 cut(s) 19, 1485
EarI CTCTTC 2 cut(s) 19, 1485
EciI GGCGGA 1 cut(s) 1208
Ecl136II GAGCTC 1 cut(s) 103
EclXI CGGCCG 1 cut(s) 137
Eco130I CCWWGG 3 cut(s) 121, 1071, 1251
Eco147I AGGCCT 1 cut(s) 862
Eco24I GRGCYC 1 cut(s) 105
Eco47I GGWCC 1 cut(s) 192
Eco52I CGGCCG 1 cut(s) 137
Eco53kI GAGCTC 1 cut(s) 103
Eco57I CTGAAG 3 cut(s) 321, 672, 1509
Eco88I CYCGRG 1 cut(s) 98
EcoICRI GAGCTC 1 cut(s) 103
EcoRI GAATTC 1 cut(s) 584
EcoRII CCWGG 4 cut(s) 366, 1581, 1940, 1975
EcoT14I CCWWGG 3 cut(s) 121, 1071, 1251
EcoT22I ATGCAT 1 cut(s) 1139
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 3 cut(s) 121, 1071, 1251
FalI AAGNNNNNCTT 4 cut(s) 1707, 1739, 1893, 1925
FaqI GGGAC 2 cut(s) 681, 958
FauNDI CATATG 1 cut(s) 1600
FbaI TGATCA 1 cut(s) 813
Fnu4HI GCNGC 7 cut(s) 34, 1101, 1248, 1578, 1872, 2043, 2111
FokI GGATG 4 cut(s) 1269, 1598, 1604, 1712
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 7 cut(s) 34, 1101, 1248, 1578, 1872, 2043, 2111
FspBI CTAG 2 cut(s) 122, 1949
GlaI GCGC 1 cut(s) 258
GluI GCNGC 7 cut(s) 34, 1101, 1248, 1578, 1872, 2043, 2111
GsaI CCCAGC 2 cut(s) 328, 396
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 9 cut(s) 5, 96, 139, 302, 862, 891, 934, 1054, 1628
HapII CCGG 2 cut(s) 24, 1606
HgaI GACGC 1 cut(s) 31
HhaI GCGC 1 cut(s) 259
Hin1I GRCGYC 1 cut(s) 42
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HindIII AAGCTT 1 cut(s) 1336
HinfI GANTC 6 cut(s) 20, 703, 989, 1393, 1434, 2087
HpaII CCGG 2 cut(s) 24, 1606
HphI GGTGA 4 cut(s) 366, 627, 758, 1835
Hpy166II GTNNAC 3 cut(s) 1126, 1453, 1957
Hpy188III TCNNGA 7 cut(s) 24, 85, 242, 907, 1606, 1724, 1925
Hpy8I GTNNAC 3 cut(s) 1126, 1453, 1957
Hpy99I CGWCG 2 cut(s) 41, 47
HpyAV CCTTC 6 cut(s) 292, 747, 990, 1183, 1482, 1837
HpyCH4III ACNGT 8 cut(s) 179, 311, 414, 554, 809, 1430, 1885, 1895
HpyCH4IV ACGT 4 cut(s) 74, 604, 1610, 2064
HpyF10VI GCNNNNNNNGC 9 cut(s) 39, 117, 145, 537, 721, 859, 1060, 1281, 1634
HpySE526I ACGT 4 cut(s) 74, 604, 1610, 2064
Hsp92I GRCGYC 1 cut(s) 42
HspAI GCGC 1 cut(s) 257
Kpn2I TCCGGA 2 cut(s) 23, 1605
Ksp22I TGATCA 1 cut(s) 813
Kzo9I GATC 4 cut(s) 244, 659, 813, 1783
LmnI GCTCC 3 cut(s) 203, 1244, 2054
Lsp1109I GCAGC 6 cut(s) 1112, 1259, 1564, 1858, 2029, 2122
LweI GCATC 4 cut(s) 739, 884, 1247, 1699
MabI ACCWGGT 1 cut(s) 366
MaeI CTAG 2 cut(s) 122, 1949
MaeII ACGT 4 cut(s) 74, 604, 1610, 2064
MaeIII GTNAC 8 cut(s) 514, 572, 1045, 1198, 1291, 1397, 1561, 1651
MalI GATC 4 cut(s) 246, 661, 815, 1785
MboI GATC 4 cut(s) 244, 659, 813, 1783
MfeI CAATTG 5 cut(s) 421, 1302, 1656, 2091, 2115
MflI RGATCY 2 cut(s) 244, 659
MhlI GDGCHC 5 cut(s) 105, 186, 451, 791, 1150
MlsI TGGCCA 3 cut(s) 5, 891, 1628
MluNI TGGCCA 3 cut(s) 5, 891, 1628
MlyI GAGTC 3 cut(s) 998, 1443, 2096
MmeI TCCRAC 2 cut(s) 1449, 2064
Mox20I TGGCCA 3 cut(s) 5, 891, 1628
Mph1103I ATGCAT 1 cut(s) 1139
MroI TCCGGA 2 cut(s) 23, 1605
MroXI GAANNNNTTC 3 cut(s) 352, 979, 1338
MscI TGGCCA 3 cut(s) 5, 891, 1628
MslI CAYNNNNRTG 2 cut(s) 1698, 1978
Msp20I TGGCCA 3 cut(s) 5, 891, 1628
MspA1I CMGCKG 1 cut(s) 1103
MspI CCGG 2 cut(s) 24, 1606
MspR9I CCNGG 4 cut(s) 368, 1583, 1942, 1977
MunI CAATTG 5 cut(s) 421, 1302, 1656, 2091, 2115
MvaI CCWGG 4 cut(s) 368, 1583, 1942, 1977
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 9 cut(s) 39, 117, 145, 537, 721, 859, 1060, 1281, 1634
NdeI CATATG 1 cut(s) 1600
NdeII GATC 4 cut(s) 244, 659, 813, 1783
NlaIV GGNNCC 3 cut(s) 492, 1149, 1750
NmeAIII GCCGAG 1 cut(s) 72
NmuCI GTSAC 3 cut(s) 1045, 1198, 1651
NsiI ATGCAT 1 cut(s) 1139
NspI RCATGY 4 cut(s) 257, 1124, 1571, 1677
OliI CACNNNNGTG 1 cut(s) 1978
PaeI GCATGC 1 cut(s) 257
PaeR7I CTCGAG 1 cut(s) 98
PagI TCATGA 1 cut(s) 1924
PceI AGGCCT 1 cut(s) 862
PciI ACATGT 2 cut(s) 1120, 1567
PdmI GAANNNNTTC 3 cut(s) 352, 979, 1338
PfeI GAWTC 3 cut(s) 20, 703, 1393
PflFI GACNNNGTC 1 cut(s) 41
PflMI CCANNNNNTGG 1 cut(s) 1548
PfoI TCCNGGA 1 cut(s) 1940
PkrI GCNGC 7 cut(s) 35, 1102, 1249, 1579, 1873, 2044, 2112
PleI GAGTC 3 cut(s) 997, 1442, 2095
PpsI GAGTC 3 cut(s) 997, 1442, 2095
PscI ACATGT 2 cut(s) 1120, 1567
Psp124BI GAGCTC 1 cut(s) 105
Psp6I CCWGG 4 cut(s) 366, 1581, 1940, 1975
PspFI CCCAGC 2 cut(s) 324, 392
PspGI CCWGG 4 cut(s) 366, 1581, 1940, 1975
PspN4I GGNNCC 3 cut(s) 492, 1149, 1750
PspPI GGNCC 3 cut(s) 192, 932, 1052
PspXI VCTCGAGB 1 cut(s) 98
PstI CTGCAG 1 cut(s) 1876
PsuI RGATCY 2 cut(s) 244, 659
PsyI GACNNNGTC 1 cut(s) 41
PvuII CAGCTG 1 cut(s) 1103
RsaI GTAC 3 cut(s) 313, 1882, 1958
RsaNI GTAC 3 cut(s) 312, 1881, 1957
RseI CAYNNNNRTG 2 cut(s) 1698, 1978
SacI GAGCTC 1 cut(s) 105
SatI GCNGC 7 cut(s) 34, 1101, 1248, 1578, 1872, 2043, 2111
Sau3AI GATC 4 cut(s) 244, 659, 813, 1783
Sau96I GGNCC 3 cut(s) 192, 932, 1052
SchI GAGTC 3 cut(s) 998, 1443, 2096
ScrFI CCNGG 4 cut(s) 368, 1583, 1942, 1977
SduI GDGCHC 5 cut(s) 105, 186, 451, 791, 1150
SexAI ACCWGGT 1 cut(s) 366
SfaNI GCATC 4 cut(s) 739, 884, 1247, 1699
SfcI CTRYAG 2 cut(s) 553, 1872
Sfr274I CTCGAG 1 cut(s) 98
SinI GGWCC 1 cut(s) 192
SlaI CTCGAG 1 cut(s) 98
SmiMI CAYNNNNRTG 2 cut(s) 1698, 1978
SmlI CTYRAG 3 cut(s) 98, 240, 905
SmoI CTYRAG 3 cut(s) 98, 240, 905
SpeI ACTAGT 1 cut(s) 1948
SphI GCATGC 1 cut(s) 257
SseBI AGGCCT 1 cut(s) 862
SsiI CCGC 2 cut(s) 34, 1193
SspMI CTAG 2 cut(s) 122, 1949
SstI GAGCTC 1 cut(s) 105
StuI AGGCCT 1 cut(s) 862
StyD4I CCNGG 4 cut(s) 366, 1581, 1940, 1975
StyI CCWWGG 3 cut(s) 121, 1071, 1251
TaaI ACNGT 8 cut(s) 179, 311, 414, 554, 809, 1430, 1885, 1895
TaiI ACGT 4 cut(s) 77, 607, 1613, 2067
TaqI TCGA 4 cut(s) 99, 401, 588, 706
TatI WGTACW 1 cut(s) 1956
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 3 cut(s) 20, 703, 1393
TscAI CASTG 3 cut(s) 791, 1054, 1750
TseFI GTSAC 3 cut(s) 1045, 1198, 1651
TseI GCWGC 6 cut(s) 1100, 1247, 1577, 1871, 2042, 2110
Tsp45I GTSAC 3 cut(s) 1045, 1198, 1651
TspGWI ACGGA 1 cut(s) 1855
TspRI CASTG 3 cut(s) 791, 1054, 1750
Tth111I GACNNNGTC 1 cut(s) 41
Van91I CCANNNNNTGG 1 cut(s) 1548
VpaK11BI GGWCC 1 cut(s) 192
XceI RCATGY 4 cut(s) 257, 1124, 1571, 1677
XcmI CCANNNNNNNNNTGG 1 cut(s) 1078
XhoI CTCGAG 1 cut(s) 98
XmaJI CCTAGG 1 cut(s) 121
XmnI GAANNNNTTC 3 cut(s) 352, 979, 1338
XspI CTAG 2 cut(s) 122, 1949
Zsp2I ATGCAT 1 cut(s) 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.