MD10G1178800.v1.1

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0007909
Physical Location & Seq
Reverse (-)
27262705 .. 27268182
5478 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1178800.v1.1.491

Sequence Viewer

Length: 2121 bp
ATGCAACGCTCTCTGAGTTTCCGAACCTTCGTTTCAATGGCGGACCCTAACCCTAACCCTAAGTGCAGCGACAGTAGCAGTACCAGGTCGACGATGAACCCGTGGGTTCTTCATTTTCAGAAACTGGGCCTCGAGCTCAAGTGCCCGCTCTGCTTGAATTTGCTTAATCGGCCGACATTACTTCCATGCAATCACATTTTCTGCAATTCCTGCATACCCAGTTCGAGTTGCCCTGTTTGTAAAGCTGAGGTTGCGGATCGAGATCTCAGGCCTGTGCCATTCATGGAAAACATAGTAGCCATCTATAAAAGCTTGGATGCGTCTTTCTGCACCAATTTGTTGCAGCCCGTTTCTTCTGATGTTAGAACCATTTTGGAACAAAACCCCATTTCGCCTAATATCAGTTTTGCTGGCACAATTGCTAAAGAACCATTTGACAATGACCAAGGCGGTAATTCAAACAGTGGACATTCCATCTATTCGTCGAGTGCTCATGAACGAGTTTGGGCTCCTTGTAGTCTAAATTGTTCTGTTGCTGATGGAGCTGGCAAGAATGGCAAAGTAAAAAACTGTAGCATGCCAATAGATGCTAATGGCAAGGTATTGGATTTTGCTAGAAGTGGATTGGGAAATCCCAATTCACAACTACCGAGATCTCATATAAGAGCTGGTGGACTCGAAGAGTGCATGACTGTAGAAAGAGATATGAATCATGCAGCACAGTCATTGCCCAACAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAGCTGTGGTCGGCGCTGTGAGCAAATTTCAGAAAATTCTTTGGTCAGGAGATCGATCAGCAACATTGATGATAGTAGAGTAGGGCAGAAAAGGCATGATAGTTGTGCAACTGAAATTGATGGTCATTTAAGAAAGAAAATAAAGTATGAGCCAGTTTCAGAAACTTATTCTGAGCTCGAATATAAGTTCAGTACAGCTCCTAACGAATCATTCACAAAGAGAACAATTTGTGCATTTTGCCAGTCTTCCACAATCTCAGTGGTTACAGGGCCAATGTTGCATTATTCTAAAGAGAGAATGGTAGAGGGAGATGAGGCAAATGCTTCAAATGTTATACATGTTCACAAAATATGCATTGATTGGGCACCGCAAGTGTATTTTGAAGGTGAAAATGTAAAGAGATTGAAGGCAGAAGTGTTAAGGGGTGCGAAGCTAAAATGCACCAAATGTGGGCTAAAGGGAGCAGCTTTGGGATGCTTTGTGAAGTCCTGCCGGAGAAGCTATCATGTTACCTGTGCAATTGAAATTTCTAAATGTCGTTGGGACAAGGAAAACTTTCTGCTGCTCTGTCCAGCTCATTGTTCAACTAAATTTCCCAGTGAGAAGTCAAATTATGGGAAGCCCAAAATCTGTCCGCCACCCAACAGTGTGGAAGTTCCAGATAAAGTGAATCAATGGATCATGTGCCCATCCGGTTTGTCTTCTGAAGAGAAGCTTCTTTTAATCAAGTTTGCCGAGAAGATTGGTGCAACTGTGTCCAGGACCTGGAGACCAGATGTTACACATGTGATTGCAGCCCTGGATGGGGATGGTGCATATGTGAGGACATTCAAAACTTGCATGGCCATTTTGGCTGGAAGATGGATTCTGAAAATTGACTGGGTAAAAGCATGCATGGAAGCCACAGATCATCTGAATGAAGAACCATATGAAGTTAGTCTTGATAACTATGGATGCTGTGATGGCCCAAAAACTGGCAGGCTTCGGGCAACAAACAACGATCCAAAGCTCTTTAATGGTTTGAGTTTCTATTTTGCTGGTGATTTTGTACTGGATAGAAAGGAAGATCTTCAAGATTTGATCATTGCAGCAGGAGGCACAGTTTTCAACAGCTCAGAAGAAGTGCTGGAACGAAGTTGTCTTGAACAGACTGCTTCAAGGACGCTAGTTGTGTACAACCTCGACCCACCAGAAGGATGTAAGTTGGGGGAAGAAGTTTCGATCCTTTGGCAACGGTCAAATGAGGCCCAGGATATAGCTGCAAAAATTGGATCACAAATCATCGGTCACACATGGCTCTTGGAATCAATTGCGAGATGCAAGTTACAGCCTTTTGTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

707

Amino Acids

78.02

Weight (kDa)

7.37

Isoelectric Point (pI)

52.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_4 PF15227 48 - 77 8.5e-06 zinc finger of C3HC4-type, RING
zf-HC5HC2H_2 PF13832 368 - 435 2.7e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 374 - 452 1.3e-09 PHD-like zinc-binding domain
BRCT PF00533 488 - 558 8e-06 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1141
AccB7I CCANNNNNTGG 2 cut(s) 1542, 1751
AccBSI CCGCTC 1 cut(s) 148
AccI GTMKAC 1 cut(s) 89
AciI CCGC 6 cut(s) 41, 146, 254, 450, 1145, 1412
AclWI GGATC 5 cut(s) 264, 1463, 1772, 1993, 2056
AcoI YGGCCR 2 cut(s) 170, 1620
AcsI RAATTY 5 cut(s) 157, 801, 811, 1302, 1367
AcuI CTGAAG 1 cut(s) 1503
AfaI GTAC 4 cut(s) 82, 970, 1827, 1952
AfiI CCNNNNNNNGG 7 cut(s) 749, 1227, 1542, 1581, 1582, 1751, 1970
AflIII ACRYGT 2 cut(s) 1114, 1561
AjnI CCWGG 5 cut(s) 83, 1535, 1541, 1575, 2025
Alw21I GWGCWC 3 cut(s) 138, 493, 954
Alw26I GTCTC 1 cut(s) 1540
AlwI GGATC 5 cut(s) 264, 1463, 1772, 1993, 2056
AlwNI CAGNNNCTG 2 cut(s) 124, 1542
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 7 cut(s) 127, 170, 269, 1046, 1620, 1741, 2022
ApeKI GCWGC 8 cut(s) 66, 343, 716, 1241, 1339, 1571, 1865, 2036
ApoI RAATTY 5 cut(s) 157, 801, 811, 1302, 1367
ArsI GACNNNNNNTTYG 2 cut(s) 2047, 2079
Asp700I GAANNNNTTC 2 cut(s) 1332, 1845
AspLEI GCGC 1 cut(s) 792
AspS9I GGNCC 6 cut(s) 43, 127, 1046, 1539, 1742, 2023
AsuHPI GGTGA 3 cut(s) 764, 1175, 1829
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 2 cut(s) 43, 1539
BaeGI GKGCMC 3 cut(s) 146, 1144, 1466
BalI TGGCCA 1 cut(s) 1622
BanI GGYRCC 1 cut(s) 1141
BanII GRGCYC 3 cut(s) 138, 511, 954
BbsI GAAGAC 2 cut(s) 1014, 1470
Bbv12I GWGCWC 3 cut(s) 138, 493, 954
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 8 cut(s) 78, 355, 728, 1253, 1326, 1583, 1877, 2023
BccI CCATC 9 cut(s) 308, 482, 533, 890, 1474, 1574, 1580, 1632, 1733
BciT130I CCWGG 5 cut(s) 85, 1537, 1543, 1577, 2027
BclI TGATCA 1 cut(s) 1857
BcoDI GTCTC 1 cut(s) 1540
BfaI CTAG 2 cut(s) 615, 1943
BfmI CTRYAG 2 cut(s) 571, 693
BfoI RGCGCY 1 cut(s) 793
BglI GCCNNNNNGGC 1 cut(s) 1628
BglII AGATCT 3 cut(s) 262, 653, 1843
BisI GCNGC 8 cut(s) 67, 344, 717, 1242, 1340, 1572, 1866, 2037
BlsI GCNGC 8 cut(s) 68, 345, 718, 1243, 1341, 1573, 1867, 2038
Bme1390I CCNGG 5 cut(s) 85, 1537, 1543, 1577, 2027
Bme18I GGWCC 2 cut(s) 43, 1539
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 6 cut(s) 43, 127, 1046, 1539, 1742, 2023
BmiI GGNNCC 3 cut(s) 45, 510, 1143
BmrFI CCNGG 5 cut(s) 85, 1537, 1543, 1577, 2027
BmrI ACTGGG 4 cut(s) 134, 213, 1368, 1666
BmsI GCATC 6 cut(s) 307, 577, 745, 1241, 1721, 2084
BmuI ACTGGG 4 cut(s) 134, 213, 1368, 1666
BpiI GAAGAC 2 cut(s) 1014, 1470
BpmI CTGGAG 1 cut(s) 1564
Bpu10I CCTNAGC 1 cut(s) 246
BpuEI CTTGAG 1 cut(s) 122
Bsa29I ATCGAT 1 cut(s) 830
BsaBI GATNNNNATC 2 cut(s) 261, 708
BsaI GGTCTC 1 cut(s) 1540
BsaJI CCNNGG 4 cut(s) 101, 445, 1575, 2025
BsaWI WCCGGW 1 cut(s) 1469
BsaXI ACNNNNNCTCC 2 cut(s) 1863, 1893
Bsc4I CCNNNNNNNGG 7 cut(s) 749, 1227, 1542, 1581, 1582, 1751, 1970
Bse1I ACTGG 8 cut(s) 129, 219, 929, 1018, 1374, 1661, 1756, 1833
Bse3DI GCAATG 2 cut(s) 725, 1860
Bse8I GATNNNNATC 2 cut(s) 261, 708
BseBI CCWGG 5 cut(s) 85, 1537, 1543, 1577, 2027
BseCI ATCGAT 1 cut(s) 830
BseDI CCNNGG 4 cut(s) 101, 445, 1575, 2025
BseGI GGATG 7 cut(s) 322, 1256, 1466, 1585, 1591, 1736, 1979
BseJI GATNNNNATC 2 cut(s) 261, 708
BseLI CCNNNNNNNGG 7 cut(s) 749, 1227, 1542, 1581, 1582, 1751, 1970
BseMI GCAATG 2 cut(s) 725, 1860
BseMII CTCAG 6 cut(s) 5, 237, 280, 939, 1047, 1905
BseNI ACTGG 8 cut(s) 129, 219, 929, 1018, 1374, 1661, 1756, 1833
BseSI GKGCMC 3 cut(s) 146, 1144, 1466
BseX3I CGGCCG 1 cut(s) 170
BseXI GCAGC 8 cut(s) 78, 355, 728, 1253, 1326, 1583, 1877, 2023
BsgI GTGCAG 2 cut(s) 85, 313
Bsh1285I CGRYCG 1 cut(s) 173
BshFI GGCC 7 cut(s) 129, 172, 271, 1048, 1622, 1743, 2024
BshNI GGYRCC 1 cut(s) 1141
BshVI ATCGAT 1 cut(s) 830
BsiEI CGRYCG 1 cut(s) 173
BsiHKAI GWGCWC 3 cut(s) 138, 493, 954
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 2 cut(s) 1270, 1470
BslFI GGGAC 1 cut(s) 1334
BslI CCNNNNNNNGG 7 cut(s) 749, 1227, 1542, 1581, 1582, 1751, 1970
BsmAI GTCTC 1 cut(s) 1540
BsmFI GGGAC 1 cut(s) 1334
BsnI GGCC 7 cut(s) 129, 172, 271, 1048, 1622, 1743, 2024
Bso31I GGTCTC 1 cut(s) 1540
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 7 cut(s) 138, 146, 493, 511, 954, 1144, 1466
Bsp1407I TGTACA 1 cut(s) 1950
BspACI CCGC 6 cut(s) 41, 146, 254, 450, 1145, 1412
BspANI GGCC 7 cut(s) 129, 172, 271, 1048, 1622, 1743, 2024
BspCNI CTCAG 6 cut(s) 6, 238, 279, 940, 1046, 1904
BspDI ATCGAT 1 cut(s) 830
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 3 cut(s) 45, 510, 1143
BspPI GGATC 5 cut(s) 264, 1463, 1772, 1993, 2056
BspT107I GGYRCC 1 cut(s) 1141
BspTNI GGTCTC 1 cut(s) 1540
BsrBI CCGCTC 1 cut(s) 148
BsrDI GCAATG 2 cut(s) 725, 1860
BsrGI TGTACA 1 cut(s) 1950
BsrI ACTGG 8 cut(s) 129, 219, 929, 1018, 1374, 1661, 1756, 1833
BssECI CCNNGG 4 cut(s) 101, 445, 1575, 2025
BssT1I CCWWGG 1 cut(s) 445
Bst2UI CCWGG 5 cut(s) 85, 1537, 1543, 1577, 2027
Bst6I CTCTTC 2 cut(s) 675, 1479
BstAPI GCANNNNNTGC 1 cut(s) 210
BstAUI TGTACA 1 cut(s) 1950
BstC8I GCNNGC 6 cut(s) 146, 412, 547, 578, 1669, 1757
BstDEI CTNAG 7 cut(s) 14, 60, 246, 266, 948, 1033, 1891
BstDSI CCRYGG 1 cut(s) 101
BstF5I GGATG 7 cut(s) 322, 1256, 1466, 1585, 1591, 1736, 1979
BstH2I RGCGCY 1 cut(s) 793
BstHHI GCGC 1 cut(s) 792
BstMAI GTCTC 1 cut(s) 1540
BstMCI CGRYCG 1 cut(s) 173
BstNI CCWGG 5 cut(s) 85, 1537, 1543, 1577, 2027
BstNSI RCATGY 4 cut(s) 580, 1118, 1565, 1671
BstSCI CCNGG 5 cut(s) 83, 1535, 1541, 1575, 2025
BstSFI CTRYAG 2 cut(s) 571, 693
BstSLI GKGCMC 3 cut(s) 146, 1144, 1466
BstV1I GCAGC 8 cut(s) 78, 355, 728, 1253, 1326, 1583, 1877, 2023
BstV2I GAAGAC 2 cut(s) 1014, 1470
BstX2I RGATCY 3 cut(s) 262, 653, 1843
BstXI CCANNNNNNTGG 1 cut(s) 1426
BstYI RGATCY 3 cut(s) 262, 653, 1843
BstZI CGGCCG 1 cut(s) 170
Bsu15I ATCGAT 1 cut(s) 830
BsuRI GGCC 7 cut(s) 129, 172, 271, 1048, 1622, 1743, 2024
BsuTUI ATCGAT 1 cut(s) 830
BtgI CCRYGG 1 cut(s) 101
BtsCI GGATG 7 cut(s) 322, 1256, 1466, 1585, 1591, 1736, 1979
BtsIMutI CAGTG 4 cut(s) 469, 1041, 1381, 1429
Cac8I GCNNGC 6 cut(s) 146, 412, 547, 578, 1669, 1757
CaiI CAGNNNCTG 2 cut(s) 124, 1542
CciI TCATGA 1 cut(s) 493
CfoI GCGC 1 cut(s) 792
Cfr13I GGNCC 6 cut(s) 43, 127, 1046, 1539, 1742, 2023
ClaI ATCGAT 1 cut(s) 830
CseI GACGC 2 cut(s) 309, 1948
CsiI ACCWGGT 1 cut(s) 83
Csp6I GTAC 4 cut(s) 81, 969, 1826, 1951
CspCI CAANNNNNGTGG 2 cut(s) 1017, 1052
CviQI GTAC 4 cut(s) 81, 969, 1826, 1951
DdeI CTNAG 7 cut(s) 14, 60, 246, 266, 948, 1033, 1891
EaeI YGGCCR 2 cut(s) 170, 1620
EagI CGGCCG 1 cut(s) 170
Eam1104I CTCTTC 2 cut(s) 675, 1479
EarI CTCTTC 2 cut(s) 675, 1479
EciI GGCGGA 2 cut(s) 56, 1401
Ecl136II GAGCTC 2 cut(s) 136, 952
EclXI CGGCCG 1 cut(s) 170
Eco130I CCWWGG 1 cut(s) 445
Eco147I AGGCCT 1 cut(s) 271
Eco24I GRGCYC 3 cut(s) 138, 511, 954
Eco31I GGTCTC 1 cut(s) 1540
Eco47I GGWCC 2 cut(s) 43, 1539
Eco52I CGGCCG 1 cut(s) 170
Eco53kI GAGCTC 2 cut(s) 136, 952
Eco57I CTGAAG 1 cut(s) 1503
Eco88I CYCGRG 1 cut(s) 131
EcoICRI GAGCTC 2 cut(s) 136, 952
EcoO109I RGGNCCY 1 cut(s) 1539
EcoRII CCWGG 5 cut(s) 83, 1535, 1541, 1575, 2025
EcoT14I CCWWGG 1 cut(s) 445
EcoT22I ATGCAT 2 cut(s) 1133, 1673
EcoT38I GRGCYC 3 cut(s) 138, 511, 954
ErhI CCWWGG 1 cut(s) 445
FalI AAGNNNNNCTT 6 cut(s) 1316, 1348, 1476, 1508, 1701, 1733
FaqI GGGAC 1 cut(s) 1334
FauI CCCGC 1 cut(s) 153
FauNDI CATATG 2 cut(s) 1594, 1705
FbaI TGATCA 1 cut(s) 1857
FblI GTMKAC 1 cut(s) 89
Fnu4HI GCNGC 8 cut(s) 67, 344, 717, 1242, 1340, 1572, 1866, 2037
FokI GGATG 7 cut(s) 329, 1263, 1453, 1592, 1598, 1743, 1986
FriOI GRGCYC 3 cut(s) 138, 511, 954
Fsp4HI GCNGC 8 cut(s) 67, 344, 717, 1242, 1340, 1572, 1866, 2037
FspBI CTAG 2 cut(s) 615, 1943
GlaI GCGC 1 cut(s) 791
GluI GCNGC 8 cut(s) 67, 344, 717, 1242, 1340, 1572, 1866, 2037
GsuI CTGGAG 1 cut(s) 1564
HaeII RGCGCY 1 cut(s) 793
HaeIII GGCC 7 cut(s) 129, 172, 271, 1048, 1622, 1743, 2024
HapII CCGG 2 cut(s) 1270, 1470
HgaI GACGC 2 cut(s) 309, 1948
HhaI GCGC 1 cut(s) 792
Hin6I GCGC 1 cut(s) 790
HinP1I GCGC 1 cut(s) 790
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
HindIII AAGCTT 2 cut(s) 310, 1490
HinfI GANTC 6 cut(s) 675, 709, 983, 1447, 1642, 2081
HpaII CCGG 2 cut(s) 1270, 1470
HphI GGTGA 3 cut(s) 764, 1175, 1829
Hpy166II GTNNAC 5 cut(s) 90, 467, 674, 1120, 1951
Hpy188III TCNNGA 7 cut(s) 260, 494, 823, 1436, 1718, 1850, 1919
Hpy8I GTNNAC 5 cut(s) 90, 467, 674, 1120, 1951
Hpy99I CGWCG 2 cut(s) 94, 487
HpyAV CCTTC 5 cut(s) 37, 753, 1154, 1177, 1964
HpyF3I CTNAG 7 cut(s) 14, 60, 246, 266, 948, 1033, 1891
HspAI GCGC 1 cut(s) 790
Ksp22I TGATCA 1 cut(s) 1857
LmnI GCTCC 4 cut(s) 514, 542, 979, 1238
Lsp1109I GCAGC 8 cut(s) 78, 355, 728, 1253, 1326, 1583, 1877, 2023
LweI GCATC 6 cut(s) 307, 577, 745, 1241, 1721, 2084
MabI ACCWGGT 1 cut(s) 83
MaeI CTAG 2 cut(s) 615, 1943
MaeIII GTNAC 5 cut(s) 1039, 1285, 1555, 2063, 2100
MbiI CCGCTC 1 cut(s) 148
MfeI CAATTG 3 cut(s) 417, 1296, 2085
MflI RGATCY 3 cut(s) 262, 653, 1843
MhlI GDGCHC 7 cut(s) 138, 146, 493, 511, 954, 1144, 1466
MlsI TGGCCA 1 cut(s) 1622
MluNI TGGCCA 1 cut(s) 1622
MlyI GAGTC 1 cut(s) 669
MnlI CCTC 9 cut(s) 140, 241, 750, 1075, 1084, 1593, 1865, 1967, 2014
Mox20I TGGCCA 1 cut(s) 1622
Mph1103I ATGCAT 2 cut(s) 1133, 1673
MroXI GAANNNNTTC 2 cut(s) 1332, 1845
MscI TGGCCA 1 cut(s) 1622
MseI TTAA 5 cut(s) 165, 905, 1196, 1499, 1791
MslI CAYNNNNRTG 1 cut(s) 1692
Msp20I TGGCCA 1 cut(s) 1622
MspI CCGG 2 cut(s) 1270, 1470
MspR9I CCNGG 5 cut(s) 85, 1537, 1543, 1577, 2027
MunI CAATTG 3 cut(s) 417, 1296, 2085
MvaI CCWGG 5 cut(s) 85, 1537, 1543, 1577, 2027
NdeI CATATG 2 cut(s) 1594, 1705
NlaIV GGNNCC 3 cut(s) 45, 510, 1143
NmeAIII GCCGAG 1 cut(s) 1537
NmuCI GTSAC 1 cut(s) 2063
NsiI ATGCAT 2 cut(s) 1133, 1673
NspI RCATGY 4 cut(s) 580, 1118, 1565, 1671
PaeI GCATGC 2 cut(s) 580, 1671
PaeR7I CTCGAG 1 cut(s) 131
PagI TCATGA 1 cut(s) 493
PceI AGGCCT 1 cut(s) 271
PciI ACATGT 2 cut(s) 1114, 1561
PcsI WCGNNNNNNNCGW 1 cut(s) 98
PdmI GAANNNNTTC 2 cut(s) 1332, 1845
PfeI GAWTC 5 cut(s) 709, 983, 1447, 1642, 2081
PflMI CCANNNNNTGG 2 cut(s) 1542, 1751
PfoI TCCNGGA 1 cut(s) 1535
PkrI GCNGC 8 cut(s) 68, 345, 718, 1243, 1341, 1573, 1867, 2038
PleI GAGTC 1 cut(s) 669
PpsI GAGTC 1 cut(s) 669
PpuMI RGGWCCY 1 cut(s) 1539
PscI ACATGT 2 cut(s) 1114, 1561
Psp124BI GAGCTC 2 cut(s) 138, 954
Psp5II RGGWCCY 1 cut(s) 1539
Psp6I CCWGG 5 cut(s) 83, 1535, 1541, 1575, 2025
PspGI CCWGG 5 cut(s) 83, 1535, 1541, 1575, 2025
PspN4I GGNNCC 3 cut(s) 45, 510, 1143
PspPI GGNCC 6 cut(s) 43, 127, 1046, 1539, 1742, 2023
PspPPI RGGWCCY 1 cut(s) 1539
PspXI VCTCGAGB 1 cut(s) 131
PstNI CAGNNNCTG 2 cut(s) 124, 1542
PsuI RGATCY 3 cut(s) 262, 653, 1843
RsaI GTAC 4 cut(s) 82, 970, 1827, 1952
RsaNI GTAC 4 cut(s) 81, 969, 1826, 1951
RseI CAYNNNNRTG 1 cut(s) 1692
SacI GAGCTC 2 cut(s) 138, 954
SalI GTCGAC 1 cut(s) 88
SaqAI TTAA 5 cut(s) 165, 905, 1196, 1499, 1791
SatI GCNGC 8 cut(s) 67, 344, 717, 1242, 1340, 1572, 1866, 2037
Sau96I GGNCC 6 cut(s) 43, 127, 1046, 1539, 1742, 2023
SchI GAGTC 1 cut(s) 669
ScrFI CCNGG 5 cut(s) 85, 1537, 1543, 1577, 2027
SduI GDGCHC 7 cut(s) 138, 146, 493, 511, 954, 1144, 1466
SexAI ACCWGGT 1 cut(s) 83
SfaNI GCATC 6 cut(s) 307, 577, 745, 1241, 1721, 2084
SfcI CTRYAG 2 cut(s) 571, 693
Sfr274I CTCGAG 1 cut(s) 131
SinI GGWCC 2 cut(s) 43, 1539
SlaI CTCGAG 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 1692
SmlI CTYRAG 2 cut(s) 131, 137
SmoI CTYRAG 2 cut(s) 131, 137
SphI GCATGC 2 cut(s) 580, 1671
SseBI AGGCCT 1 cut(s) 271
SsiI CCGC 6 cut(s) 41, 146, 254, 450, 1145, 1412
SspMI CTAG 2 cut(s) 615, 1943
SstI GAGCTC 2 cut(s) 138, 954
StuI AGGCCT 1 cut(s) 271
StyD4I CCNGG 5 cut(s) 83, 1535, 1541, 1575, 2025
StyI CCWWGG 1 cut(s) 445
TaqII GACCGA 1 cut(s) 2051
TatI WGTACW 3 cut(s) 968, 1825, 1950
TfiI GAWTC 5 cut(s) 709, 983, 1447, 1642, 2081
Tru1I TTAA 5 cut(s) 165, 905, 1196, 1499, 1791
Tru9I TTAA 5 cut(s) 165, 905, 1196, 1499, 1791
TscAI CASTG 4 cut(s) 469, 1041, 1381, 1429
TseFI GTSAC 1 cut(s) 2063
TseI GCWGC 8 cut(s) 66, 343, 716, 1241, 1339, 1571, 1865, 2036
Tsp45I GTSAC 1 cut(s) 2063
TspDTI ATGAA 8 cut(s) 101, 110, 271, 510, 722, 735, 1710, 1722
TspRI CASTG 4 cut(s) 469, 1041, 1381, 1429
Van91I CCANNNNNTGG 2 cut(s) 1542, 1751
VpaK11BI GGWCC 2 cut(s) 43, 1539
XapI RAATTY 5 cut(s) 157, 801, 811, 1302, 1367
XceI RCATGY 4 cut(s) 580, 1118, 1565, 1671
XcmI CCANNNNNNNNNTGG 1 cut(s) 1033
XhoI CTCGAG 1 cut(s) 131
XmiI GTMKAC 1 cut(s) 89
XmnI GAANNNNTTC 2 cut(s) 1332, 1845
XspI CTAG 2 cut(s) 615, 1943
Zsp2I ATGCAT 2 cut(s) 1133, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.