MD05G1192200.v1.1

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0007909
Physical Location & Seq
Reverse (-)
32040825 .. 32045865
5041 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1192200.v1.1.491

Sequence Viewer

Length: 2085 bp
ATGGTGGACGCAAACCCTAACCGTAAATGCAGCGACAGTGGCAATACCAGGTCGATGATGAACCCGTGGGTTCTCCATTTCCAGAAACTGGGTCTCGAGCTCAAGTGCCCCCTCTGCTTGAATTTGCTTAATCGACCGACGTTGCTTCCATGCGATCACATTTTCTGCAATTGCTGCATACCCAGTTCGAGTTGCCCGGTTTGTAAAGCTCAGGTTGCGGACCGAGATCTCAGGCCTGTGCCGTTCATGGAAAACATAGTAGCGATCTACAAAAGCTTGGATGCGTCTTTCTGTGCCAATTTGTTCCAGCCTGTTTCTTCCGATGTTAGAACCATTCTGGAGCAAAACCCTGTTTTGCCTAATATCAGTTTTGCTGGGAAAATGACTAAAGAACCATTTGACAATGACCAAGGAGGTAATTCAAACAGTGGGCAATCCATCTATTCATCGAGTGCTCATGAACGAGTTTGGGCTCCTTGTAGTCTGAATCGTTCTGTAGCTGATGGAGTTGGCAACAATGACAATGTAGATAAGTGTAGCATGCCAATAGATGCTGATGGCAAGGTATTAGATTTTGCTAGAAGCGGAGTGGGAAATCCCAATTCACAACCACCAAGTTCTCAAATAAGAGCTGGTGGACTCGACGAGTGCATGACTGTAGTAGGAGACATGAATCATGCAGCACAGTCATTGCCCAACAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAGCTGTGGTCGGCGCTGTGAGCAAATTTCAGAAAATTCTTTGGTCAGGAGATCGATCAGCAAAATTGATGATGGTAGAGCAGGGCAGAAAAGACATGATAGTTGTGCAACTGAAATTGATGGTCATTTAAGAAAGAAAATAAAGTATGAGCCAGTTTTAGAGACTTATTCTGAGCTTGAACATAAGTTCAGTACACCACCTAATGAATCATTCACAAAGAGAACAATTTGTGTATTTTGCCAGTCTTCTATGATCTCGGAGGTTACAGGGCCAATGTTGCATTATTCTAAAGAGAGACTGGTAGAGGGAGATGAGGCAAATGCTTCAAATGTCATACATGTTCACAGAATATGCATTGATTGGGCACCACAAGTGTATTTCGAAGGTGAAAATGTTAAGGGATTGAAGGCAGAAGTCTCAAGGGGTGCAAAGCTAAAATGCACCAAATGTGGGCTAAAGGGAGCAGCTTTGGGATGCTTTGTAAAGTCCTGCCGGAGAAGCTATCATGTTACCTGTGCAACTGAAATTTCTAAATGTCGCTGGGACAAGGAAAACTTTCTGCTGCTATGTCCAGCTCATCGTTCAACTAAATTTCCCGGTGAGAAGTCAAATTATGGGAAGCCCAAAATCTGTCCCCAGTCCAACAGTTTGGAAGCTGCAAATGAAATGAATCAATGGATTATATGCCCATCCGGTTTGTCTTCTGAAGAAAAGCTTCTTTTAGTCAAGTTTGCCAAGAAGACTGGTGCAACTGTGTCCAAGACCTGGAGACCAAATGTTACACATTTGATTGCAGCCCTGGATGGGGACGGTGCATATGTCAGGACATTCAAAACTTGCATGGCCATTTTGGCTGGAAGATGGATTCTGAAAATTGACTGGGTAAAAGCATGCATGGAAGCCACAGATCATGTGAATGAAGAACCATATGAAGTTAGTCTTGATAACTATGGATGCTGTGATGGCCCAAAAACTGGCAGGCTTCGGGCAACAAACAATGATCCGAAACTCTTTAATGGTTTGAGTTTCTATTTTGCTGGTGATTTTTTACTGGATAGAAAGGAAGATCTTCAAGATTTGATCATTGTAGCAGGAGGCACTGTTTTCAACAGCTCAGAAGAAGTGATGGAACGAAGTTGTCTTGAACATACAGCTTCAAGGACGCTAGTTGTATACAACCTCGACCCACCAGAAGGTTGCAAGTTGGGGGAAGAAGTTTCAATCCTTTGGAAACGGTCAAATGAGGCCCAGGATATAGCTGCGAAAATTGGATCACAAATCATCGGTCACACATGGCTCTTGGAATCAATTGCAAGATGCGAGTTACAGCCTTTTGTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

695

Amino Acids

76.6

Weight (kDa)

6.61

Isoelectric Point (pI)

50.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-HC5HC2H_2 PF13832 356 - 422 3.1e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 362 - 441 3.8e-11 PHD-like zinc-binding domain
BRCT PF00533 475 - 546 3.8e-06 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1105
AccB7I CCANNNNNTGG 3 cut(s) 88, 1506, 1715
AccI GTMKAC 1 cut(s) 1914
AciI CCGC 2 cut(s) 218, 585
AclWI GGATC 2 cut(s) 1736, 2020
AcoI YGGCCR 1 cut(s) 1584
AcsI RAATTY 5 cut(s) 121, 765, 775, 1266, 1331
AcuI CTGAAG 1 cut(s) 1467
AfaI GTAC 1 cut(s) 934
AfiI CCNNNNNNNGG 8 cut(s) 88, 713, 1191, 1506, 1545, 1546, 1715, 1934
AflIII ACRYGT 1 cut(s) 1078
AjnI CCWGG 4 cut(s) 47, 1505, 1539, 1989
Alw21I GWGCWC 2 cut(s) 102, 457
Alw26I GTCTC 6 cut(s) 98, 660, 896, 1030, 1162, 1504
AlwI GGATC 2 cut(s) 1736, 2020
AlwNI CAGNNNCTG 1 cut(s) 88
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 5 cut(s) 233, 1010, 1584, 1705, 1986
ApeKI GCWGC 8 cut(s) 30, 174, 680, 1205, 1303, 1397, 1535, 2000
ApoI RAATTY 5 cut(s) 121, 765, 775, 1266, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 2011, 2043
Asp700I GAANNNNTTC 3 cut(s) 1296, 1455, 1809
AspLEI GCGC 1 cut(s) 756
AspS9I GGNCC 4 cut(s) 220, 1010, 1706, 1987
AsuC2I CCSGG 2 cut(s) 197, 1338
AsuHPI GGTGA 4 cut(s) 728, 1139, 1352, 1793
AsuII TTCGAA 1 cut(s) 1122
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 2 cut(s) 110, 1108
BalI TGGCCA 1 cut(s) 1586
BanI GGYRCC 1 cut(s) 1105
BanII GRGCYC 2 cut(s) 102, 475
BbsI GAAGAC 3 cut(s) 978, 1434, 1487
Bbv12I GWGCWC 2 cut(s) 102, 457
BbvI GCAGC 8 cut(s) 42, 161, 692, 1217, 1290, 1384, 1547, 1987
BceAI ACGGC 1 cut(s) 226
BciT130I CCWGG 4 cut(s) 49, 1507, 1541, 1991
BclI TGATCA 1 cut(s) 1821
BcnI CCSGG 2 cut(s) 197, 1338
BcoDI GTCTC 6 cut(s) 98, 660, 896, 1030, 1162, 1504
BfaI CTAG 2 cut(s) 579, 1907
BfmI CTRYAG 2 cut(s) 495, 657
BfoI RGCGCY 1 cut(s) 757
BglI GCCNNNNNGGC 1 cut(s) 1592
BglII AGATCT 2 cut(s) 226, 1807
BisI GCNGC 8 cut(s) 31, 175, 681, 1206, 1304, 1398, 1536, 2001
BlsI GCNGC 8 cut(s) 32, 176, 682, 1207, 1305, 1399, 1537, 2002
Bme1390I CCNGG 6 cut(s) 49, 197, 1338, 1507, 1541, 1991
Bme18I GGWCC 1 cut(s) 220
BmeT110I CYCGRG 1 cut(s) 95
BmgT120I GGNCC 4 cut(s) 220, 1010, 1706, 1987
BmiI GGNNCC 2 cut(s) 474, 1107
BmrFI CCNGG 6 cut(s) 49, 197, 1338, 1507, 1541, 1991
BmrI ACTGGG 4 cut(s) 98, 177, 1372, 1630
BmsI GCATC 6 cut(s) 271, 541, 709, 1205, 1685, 2048
BmuI ACTGGG 4 cut(s) 98, 177, 1372, 1630
BpiI GAAGAC 3 cut(s) 978, 1434, 1487
BpmI CTGGAG 2 cut(s) 359, 1528
Bpu10I CCTNAGC 1 cut(s) 210
Bpu14I TTCGAA 1 cut(s) 1122
BpuEI CTTGAG 2 cut(s) 86, 1144
BpuMI CCSGG 2 cut(s) 197, 1338
Bsa29I ATCGAT 1 cut(s) 794
BsaI GGTCTC 2 cut(s) 98, 1504
BsaJI CCNNGG 4 cut(s) 65, 409, 1539, 1989
BsaWI WCCGGW 1 cut(s) 1433
BsaXI ACNNNNNCTCC 2 cut(s) 1827, 1857
Bsc4I CCNNNNNNNGG 8 cut(s) 88, 713, 1191, 1506, 1545, 1546, 1715, 1934
Bse3DI GCAATG 1 cut(s) 689
BseBI CCWGG 4 cut(s) 49, 1507, 1541, 1991
BseCI ATCGAT 1 cut(s) 794
BseDI CCNNGG 4 cut(s) 65, 409, 1539, 1989
BseGI GGATG 5 cut(s) 286, 1220, 1430, 1549, 1700
BseLI CCNNNNNNNGG 8 cut(s) 88, 713, 1191, 1506, 1545, 1546, 1715, 1934
BseMI GCAATG 1 cut(s) 689
BseMII CTCAG 4 cut(s) 224, 244, 903, 1869
BseSI GKGCMC 2 cut(s) 110, 1108
BseXI GCAGC 8 cut(s) 42, 161, 692, 1217, 1290, 1384, 1547, 1987
BseYI CCCAGC 2 cut(s) 374, 1281
Bsh1285I CGRYCG 1 cut(s) 137
BshFI GGCC 5 cut(s) 235, 1012, 1586, 1707, 1988
BshNI GGYRCC 1 cut(s) 1105
BshVI ATCGAT 1 cut(s) 794
BsiEI CGRYCG 1 cut(s) 137
BsiHKAI GWGCWC 2 cut(s) 102, 457
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 4 cut(s) 197, 1234, 1338, 1434
BslFI GGGAC 3 cut(s) 1298, 1359, 1562
BslI CCNNNNNNNGG 8 cut(s) 88, 713, 1191, 1506, 1545, 1546, 1715, 1934
BsmAI GTCTC 6 cut(s) 98, 660, 896, 1030, 1162, 1504
BsmFI GGGAC 3 cut(s) 1298, 1359, 1562
BsnI GGCC 5 cut(s) 235, 1012, 1586, 1707, 1988
Bso31I GGTCTC 2 cut(s) 98, 1504
BsoBI CYCGRG 1 cut(s) 95
Bsp119I TTCGAA 1 cut(s) 1122
Bsp1286I GDGCHC 5 cut(s) 102, 110, 457, 475, 1108
BspACI CCGC 2 cut(s) 218, 585
BspANI GGCC 5 cut(s) 235, 1012, 1586, 1707, 1988
BspCNI CTCAG 4 cut(s) 223, 243, 904, 1868
BspDI ATCGAT 1 cut(s) 794
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 2 cut(s) 474, 1107
BspPI GGATC 2 cut(s) 1736, 2020
BspT104I TTCGAA 1 cut(s) 1122
BspT107I GGYRCC 1 cut(s) 1105
BspTNI GGTCTC 2 cut(s) 98, 1504
BsrDI GCAATG 1 cut(s) 689
BssECI CCNNGG 4 cut(s) 65, 409, 1539, 1989
BssNAI GTATAC 1 cut(s) 1915
BssT1I CCWWGG 1 cut(s) 409
Bst1107I GTATAC 1 cut(s) 1915
Bst2UI CCWGG 4 cut(s) 49, 1507, 1541, 1991
BstAPI GCANNNNNTGC 1 cut(s) 174
BstBI TTCGAA 1 cut(s) 1122
BstC8I GCNNGC 3 cut(s) 542, 1633, 1721
BstDEI CTNAG 4 cut(s) 210, 230, 912, 1855
BstDSI CCRYGG 1 cut(s) 65
BstF5I GGATG 5 cut(s) 286, 1220, 1430, 1549, 1700
BstH2I RGCGCY 1 cut(s) 757
BstHHI GCGC 1 cut(s) 756
BstMAI GTCTC 6 cut(s) 98, 660, 896, 1030, 1162, 1504
BstMCI CGRYCG 1 cut(s) 137
BstMWI GCNNNNNNNGC 9 cut(s) 39, 114, 174, 215, 760, 1018, 1239, 1592, 1704
BstNI CCWGG 4 cut(s) 49, 1507, 1541, 1991
BstNSI RCATGY 3 cut(s) 544, 1082, 1635
BstSCI CCNGG 6 cut(s) 47, 195, 1336, 1505, 1539, 1989
BstSFI CTRYAG 2 cut(s) 495, 657
BstSLI GKGCMC 2 cut(s) 110, 1108
BstV1I GCAGC 8 cut(s) 42, 161, 692, 1217, 1290, 1384, 1547, 1987
BstV2I GAAGAC 3 cut(s) 978, 1434, 1487
BstX2I RGATCY 2 cut(s) 226, 1807
BstXI CCANNNNNNTGG 1 cut(s) 1390
BstYI RGATCY 2 cut(s) 226, 1807
BstZ17I GTATAC 1 cut(s) 1915
Bsu15I ATCGAT 1 cut(s) 794
BsuRI GGCC 5 cut(s) 235, 1012, 1586, 1707, 1988
BsuTUI ATCGAT 1 cut(s) 794
BtgI CCRYGG 1 cut(s) 65
BtsCI GGATG 5 cut(s) 286, 1220, 1430, 1549, 1700
BtsIMutI CAGTG 3 cut(s) 43, 433, 1839
Cac8I GCNNGC 3 cut(s) 542, 1633, 1721
CaiI CAGNNNCTG 1 cut(s) 88
CciI TCATGA 1 cut(s) 457
CfoI GCGC 1 cut(s) 756
Cfr13I GGNCC 4 cut(s) 220, 1010, 1706, 1987
ClaI ATCGAT 1 cut(s) 794
CpoI CGGWCCG 1 cut(s) 220
CseI GACGC 3 cut(s) 17, 273, 1912
CsiI ACCWGGT 1 cut(s) 47
Csp6I GTAC 1 cut(s) 933
CspI CGGWCCG 1 cut(s) 220
CviQI GTAC 1 cut(s) 933
DdeI CTNAG 4 cut(s) 210, 230, 912, 1855
EaeI YGGCCR 1 cut(s) 1584
Ecl136II GAGCTC 1 cut(s) 100
Eco130I CCWWGG 1 cut(s) 409
Eco147I AGGCCT 1 cut(s) 235
Eco24I GRGCYC 2 cut(s) 102, 475
Eco31I GGTCTC 2 cut(s) 98, 1504
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 1467
Eco88I CYCGRG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 100
EcoRII CCWGG 4 cut(s) 47, 1505, 1539, 1989
EcoT14I CCWWGG 1 cut(s) 409
EcoT22I ATGCAT 2 cut(s) 1097, 1637
EcoT38I GRGCYC 2 cut(s) 102, 475
ErhI CCWWGG 1 cut(s) 409
FalI AAGNNNNNCTT 6 cut(s) 1280, 1312, 1440, 1472, 1665, 1697
FaqI GGGAC 3 cut(s) 1298, 1359, 1562
FauNDI CATATG 2 cut(s) 1558, 1669
FbaI TGATCA 1 cut(s) 1821
FblI GTMKAC 1 cut(s) 1914
Fnu4HI GCNGC 8 cut(s) 31, 175, 681, 1206, 1304, 1398, 1536, 2001
FokI GGATG 5 cut(s) 293, 1227, 1417, 1556, 1707
FriOI GRGCYC 2 cut(s) 102, 475
Fsp4HI GCNGC 8 cut(s) 31, 175, 681, 1206, 1304, 1398, 1536, 2001
FspBI CTAG 2 cut(s) 579, 1907
GlaI GCGC 1 cut(s) 755
GluI GCNGC 8 cut(s) 31, 175, 681, 1206, 1304, 1398, 1536, 2001
GsaI CCCAGC 2 cut(s) 378, 1285
GsuI CTGGAG 2 cut(s) 359, 1528
HaeII RGCGCY 1 cut(s) 757
HaeIII GGCC 5 cut(s) 235, 1012, 1586, 1707, 1988
HapII CCGG 4 cut(s) 197, 1234, 1338, 1434
HgaI GACGC 3 cut(s) 17, 273, 1912
HhaI GCGC 1 cut(s) 756
Hin6I GCGC 1 cut(s) 754
HinP1I GCGC 1 cut(s) 754
HindIII AAGCTT 2 cut(s) 274, 1454
HinfI GANTC 7 cut(s) 487, 639, 673, 947, 1411, 1606, 2045
HpaII CCGG 4 cut(s) 197, 1234, 1338, 1434
HphI GGTGA 4 cut(s) 728, 1139, 1352, 1793
Hpy166II GTNNAC 5 cut(s) 7, 638, 935, 1084, 1915
Hpy188III TCNNGA 9 cut(s) 82, 95, 338, 458, 787, 1564, 1682, 1814, 1883
Hpy8I GTNNAC 5 cut(s) 7, 638, 935, 1084, 1915
Hpy99I CGWCG 2 cut(s) 142, 647
HpyAV CCTTC 4 cut(s) 717, 1118, 1141, 1928
HpyCH4IV ACGT 1 cut(s) 140
HpyF10VI GCNNNNNNNGC 9 cut(s) 39, 114, 174, 215, 760, 1018, 1239, 1592, 1704
HpyF3I CTNAG 4 cut(s) 210, 230, 912, 1855
HpySE526I ACGT 1 cut(s) 140
HspAI GCGC 1 cut(s) 754
Ksp22I TGATCA 1 cut(s) 1821
LmnI GCTCC 3 cut(s) 340, 478, 1202
Lsp1109I GCAGC 8 cut(s) 42, 161, 692, 1217, 1290, 1384, 1547, 1987
LweI GCATC 6 cut(s) 271, 541, 709, 1205, 1685, 2048
MabI ACCWGGT 1 cut(s) 47
MaeI CTAG 2 cut(s) 579, 1907
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 5 cut(s) 1003, 1249, 1519, 2027, 2064
MfeI CAATTG 2 cut(s) 169, 2049
MflI RGATCY 2 cut(s) 226, 1807
MhlI GDGCHC 5 cut(s) 102, 110, 457, 475, 1108
MlsI TGGCCA 1 cut(s) 1586
MluNI TGGCCA 1 cut(s) 1586
MlyI GAGTC 1 cut(s) 633
MmeI TCCRAC 1 cut(s) 1407
MnlI CCTC 9 cut(s) 122, 407, 714, 994, 1039, 1048, 1829, 1931, 1978
Mox20I TGGCCA 1 cut(s) 1586
Mph1103I ATGCAT 2 cut(s) 1097, 1637
MroXI GAANNNNTTC 3 cut(s) 1296, 1455, 1809
MscI TGGCCA 1 cut(s) 1586
MseI TTAA 4 cut(s) 129, 869, 1137, 1755
MslI CAYNNNNRTG 1 cut(s) 1656
Msp20I TGGCCA 1 cut(s) 1586
MspI CCGG 4 cut(s) 197, 1234, 1338, 1434
MspR9I CCNGG 6 cut(s) 49, 197, 1338, 1507, 1541, 1991
MunI CAATTG 2 cut(s) 169, 2049
MvaI CCWGG 4 cut(s) 49, 1507, 1541, 1991
MwoI GCNNNNNNNGC 9 cut(s) 39, 114, 174, 215, 760, 1018, 1239, 1592, 1704
NciI CCSGG 2 cut(s) 197, 1338
NdeI CATATG 2 cut(s) 1558, 1669
NlaIV GGNNCC 2 cut(s) 474, 1107
NmuCI GTSAC 1 cut(s) 2027
NsiI ATGCAT 2 cut(s) 1097, 1637
NspI RCATGY 3 cut(s) 544, 1082, 1635
NspV TTCGAA 1 cut(s) 1122
PaeI GCATGC 2 cut(s) 544, 1635
PaeR7I CTCGAG 1 cut(s) 95
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 235
PciI ACATGT 1 cut(s) 1078
PdmI GAANNNNTTC 3 cut(s) 1296, 1455, 1809
PfeI GAWTC 6 cut(s) 487, 673, 947, 1411, 1606, 2045
PflMI CCANNNNNTGG 3 cut(s) 88, 1506, 1715
PkrI GCNGC 8 cut(s) 32, 176, 682, 1207, 1305, 1399, 1537, 2002
PleI GAGTC 1 cut(s) 633
PpsI GAGTC 1 cut(s) 633
PscI ACATGT 1 cut(s) 1078
Psp124BI GAGCTC 1 cut(s) 102
Psp6I CCWGG 4 cut(s) 47, 1505, 1539, 1989
PspFI CCCAGC 2 cut(s) 374, 1281
PspGI CCWGG 4 cut(s) 47, 1505, 1539, 1989
PspN4I GGNNCC 2 cut(s) 474, 1107
PspPI GGNCC 4 cut(s) 220, 1010, 1706, 1987
PstNI CAGNNNCTG 1 cut(s) 88
PsuI RGATCY 2 cut(s) 226, 1807
RsaI GTAC 1 cut(s) 934
RsaNI GTAC 1 cut(s) 933
RseI CAYNNNNRTG 1 cut(s) 1656
Rsr2I CGGWCCG 1 cut(s) 220
RsrII CGGWCCG 1 cut(s) 220
SacI GAGCTC 1 cut(s) 102
SaqAI TTAA 4 cut(s) 129, 869, 1137, 1755
SatI GCNGC 8 cut(s) 31, 175, 681, 1206, 1304, 1398, 1536, 2001
Sau96I GGNCC 4 cut(s) 220, 1010, 1706, 1987
SchI GAGTC 1 cut(s) 633
ScrFI CCNGG 6 cut(s) 49, 197, 1338, 1507, 1541, 1991
SduI GDGCHC 5 cut(s) 102, 110, 457, 475, 1108
SexAI ACCWGGT 1 cut(s) 47
SfaNI GCATC 6 cut(s) 271, 541, 709, 1205, 1685, 2048
SfcI CTRYAG 2 cut(s) 495, 657
Sfr274I CTCGAG 1 cut(s) 95
SfuI TTCGAA 1 cut(s) 1122
SinI GGWCC 1 cut(s) 220
SlaI CTCGAG 1 cut(s) 95
SmiMI CAYNNNNRTG 1 cut(s) 1656
SmlI CTYRAG 3 cut(s) 95, 101, 1159
SmoI CTYRAG 3 cut(s) 95, 101, 1159
SphI GCATGC 2 cut(s) 544, 1635
SseBI AGGCCT 1 cut(s) 235
SsiI CCGC 2 cut(s) 218, 585
SspMI CTAG 2 cut(s) 579, 1907
SstI GAGCTC 1 cut(s) 102
StuI AGGCCT 1 cut(s) 235
StyD4I CCNGG 6 cut(s) 47, 195, 1336, 1505, 1539, 1989
StyI CCWWGG 1 cut(s) 409
TaiI ACGT 1 cut(s) 143
TaqI TCGA 9 cut(s) 53, 96, 133, 188, 449, 642, 794, 1122, 1923
TaqII GACCGA 3 cut(s) 151, 237, 2015
TatI WGTACW 1 cut(s) 932
TfiI GAWTC 6 cut(s) 487, 673, 947, 1411, 1606, 2045
Tru1I TTAA 4 cut(s) 129, 869, 1137, 1755
Tru9I TTAA 4 cut(s) 129, 869, 1137, 1755
TscAI CASTG 3 cut(s) 43, 433, 1846
TseFI GTSAC 1 cut(s) 2027
TseI GCWGC 8 cut(s) 30, 174, 680, 1205, 1303, 1397, 1535, 2000
Tsp45I GTSAC 1 cut(s) 2027
TspRI CASTG 3 cut(s) 43, 433, 1846
Van91I CCANNNNNTGG 3 cut(s) 88, 1506, 1715
VpaK11BI GGWCC 1 cut(s) 220
XapI RAATTY 5 cut(s) 121, 765, 775, 1266, 1331
XceI RCATGY 3 cut(s) 544, 1082, 1635
XhoI CTCGAG 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 1914
XmnI GAANNNNTTC 3 cut(s) 1296, 1455, 1809
XspI CTAG 2 cut(s) 579, 1907
Zsp2I ATGCAT 2 cut(s) 1097, 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.