Rw6G025730

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0007909
Physical Location & Seq
Reverse (-)
49176837 .. 49182799
5963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G025730.1

Sequence Viewer

Length: 2136 bp
ATGGCCCAGTCCGCCAAGCAGTCTTCAGATTCCGGAAACTGCCGCGACGGCGTCGTTTCGCCGATGAACAAGAACCCCCTCACGTTTCATCTCCAGAAGCTCGGCCTCGAGCTCACTTGCCCTCTCTGCCTAGGGTTTTTTAATCGGCCGACATTGCTTCCCTGCAATCACATCTTCTGCAACAACTGTGTGCCCAATCGGACCAATTTTGGAGCAGAGTGTCCTCTGTGTAATATCCAAGTTCCTGGTCAAGATCTTAGGCATGCGCCTTTCATGGAAAGCATAGTAGCAATCTACAAAAGCATGAAGGCCACTTACTGTACCAACTCCTCCCAGCCTATATCCTCAGATGTTAGAACAGCTTTGGGTCAAAACCCTGTTTCACCTGATGTCAGTTTTGCTGGGAAATCGACTAAAGAACCGTTTGACAATTGCCAAGAGGGTAAATCAGAAAGTGCTCAGACCATTGTTTCATCAAGGGGTAATAAGCGAGTATGGGTTCCATGTAGTCAGAAACATTCTGTTACAGATGGAATTGGCAAGCATGGCAAAGTAGATAACTGTAGCATAGCAATAGATGGTAACAGCGAAGAATTCGAGTTGGGTAGAGGACGTAAATTTAATGGTGGATTAAATCCCAATTCACCATTACCAAGTTCTCAAATAAGATCTGTGGGACTGGATGAGTGTATGACTTCAGAAAGAGGCATGAATCCAGTAGTGCAGGCGTTGCTGGATAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAATAGCTTTGACCAGTGCTCTGAGCAAATTTCAGACAGTTTGATCAGGGGGTCAATGAGGAAAATTGATGATAGAACAGGGCAGATGAGGCCTGATAGTTCTGCATCTGATACTGATGGCCATTTGAGGGAACTCAAGAGACAGAAGAAACTGGACTATGGGCTAGTCTCAGGGACTAATTCTGAGCTGGAACTTAAATTCAGAACACCTTCTAATGAGTCTTTCACAAATAACACCATTTGTGCATTTTGCCAGTCTTACACAATCTCAGAGGTCACTGGGCCAATGTTGCACTATTCCAAGGGAAAATTTGTGGAGGGAGATGAGGCAGCTGTTTCAGATGTCATACATGTTCACAAAATATGCATTGATTGGGCACCACAAGTGTTCTTTAAAGATGAAACCATTAAAAATTTGAAGGCGGAAGTGACAAGGGGTGCAAAATTAAAATGCACCAAATGTGGGATAAAGGGAGCAGCCTTGGGATGCTTTGTGAAATCCTGCCGAAAAAGCTATCATGTTACCTGTGCAATTGAAATTTCTAAGTGCCGTTGGGATTATGAAAGCTTTCTTCTGCTGTGTCCAGCACATTGTTCAGTTAAATTTCCCAATGAGAAGTTGAATCGTAACAAGCACAAAAGTTGTCAGCTCTCCGACAGTAGAGTCGCTTCAAATGGAGTGAACAACTGGGTTTTATGCCCTTCTGGTTTGTCTTCTGAAGAGAAGATTTTTCTTTTCAAATTTGCTGAGATGAATGGTGCAACTTTGTCCAAGAGCTGGACACCTGATGTTACACATGTGATTGCTGCCCTGGATGGGGATGGTGCATATGTCCGGACGTTTAAAATTTGTATGGCCATTTTGGCAGGAAAATGGATAGTGACAATTGACTGGGTAAAAGCATGTATGGAAACTAAGCATCATGTGGACGAAGAACCTTATGAAGTTAGTCTTGATAACTATGGTTGTCGCAGTGGTGCCAAAGCTGGCAGGCTTAGGGCATTAAGCAATGATCCGAAGCTCTTTAGTGGTTTGAATTTCTATTTTGCTGGTGATTTTATACTGGAACGGAAGGAAGACTACAAAGAATTGGTCATAGCTGCAGGAGGTACTATTTTCAACAGTAAGGAAGATGTGCTTGAAGCAAGTTGTCATGAAAAGGGAACTCCGAGGACACTAGTTGTGTACAACCTTGACCCCCCACCTGGGTGCAAGTTGGGAGAAGAAGTTTCAATACTTTGGCAAAGGTCTAACGAGGCACAAGATATAGCTGCGAAAATTGGAGCTGAATACGTCTTTCACACATGGTTGTTGGAGTCAATTGCGAGGTATGAGTTGCAGCCAATTGCATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

711

Amino Acids

78.39

Weight (kDa)

6.95

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4 PF00097 40 - 77 2.3e-06 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2 PF13923 40 - 77 2.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-HC5HC2H_2 PF13832 372 - 439 2.2e-07 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 379 - 457 2.8e-09 PHD-like zinc-binding domain
BRCT PF00533 493 - 563 1.8e-09 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1442
AccB1I GGYRCC 2 cut(s) 1156, 1757
AccB7I CCANNNNNTGG 1 cut(s) 1557
AccII CGCG 1 cut(s) 45
AccIII TCCGGA 2 cut(s) 32, 1614
AciI CCGC 3 cut(s) 12, 43, 1202
AclWI GGATC 1 cut(s) 1787
AcoI YGGCCR 3 cut(s) 146, 898, 1635
AcuI CTGAAG 3 cut(s) 9, 681, 1518
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 3 cut(s) 322, 1891, 1967
AfiI CCNNNNNNNGG 8 cut(s) 752, 907, 1242, 1557, 1596, 1597, 1985, 1986
AflIII ACRYGT 2 cut(s) 1129, 1576
AgsI TTSAA 9 cut(s) 1198, 1316, 1402, 1452, 1519, 1816, 1900, 1922, 2013
AhlI ACTAGT 1 cut(s) 1957
AjnI CCWGG 3 cut(s) 244, 1590, 1984
AleI CACNNNNGTG 1 cut(s) 1987
Alw21I GWGCWC 3 cut(s) 114, 460, 800
Alw26I GTCTC 2 cut(s) 913, 952
AlwI GGATC 1 cut(s) 1787
Ama87I CYCGRG 1 cut(s) 107
Aor13HI TCCGGA 2 cut(s) 32, 1614
AoxI GGCC 8 cut(s) 3, 103, 146, 309, 869, 898, 1061, 1635
ApeKI GCWGC 6 cut(s) 1109, 1256, 1586, 1880, 2051, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 1857, 1889
Asp700I GAANNNNTTC 2 cut(s) 988, 1347
AspA2I CCTAGG 1 cut(s) 130
AspLEI GCGC 1 cut(s) 268
AspS9I GGNCC 3 cut(s) 4, 201, 1061
AsuHPI GGTGA 4 cut(s) 375, 636, 767, 1844
AvaI CYCGRG 1 cut(s) 107
AvaII GGWCC 1 cut(s) 201
AvrII CCTAGG 1 cut(s) 130
BaeGI GKGCMC 2 cut(s) 195, 1159
BalI TGGCCA 2 cut(s) 900, 1637
BanI GGYRCC 2 cut(s) 1156, 1757
BanII GRGCYC 1 cut(s) 114
BarI GAAGNNNNNNTAC 8 cut(s) 299, 331, 1432, 1464, 1844, 1876, 1998, 2030
BbsI GAAGAC 3 cut(s) 15, 1485, 1863
Bbv12I GWGCWC 3 cut(s) 114, 460, 800
BbvI GCAGC 6 cut(s) 1121, 1268, 1573, 1867, 2038, 2131
BccI CCATC 5 cut(s) 524, 572, 890, 1589, 1595
BceAI ACGGC 2 cut(s) 64, 1314
BciT130I CCWGG 3 cut(s) 246, 1592, 1986
BclI TGATCA 1 cut(s) 822
BcoDI GTCTC 2 cut(s) 913, 952
BcuI ACTAGT 1 cut(s) 1957
BfaI CTAG 3 cut(s) 131, 944, 1958
BfmI CTRYAG 2 cut(s) 562, 1881
BglI GCCNNNNNGGC 2 cut(s) 48, 1643
BglII AGATCT 2 cut(s) 253, 668
BisI GCNGC 7 cut(s) 43, 1110, 1257, 1587, 1881, 2052, 2120
BlnI CCTAGG 1 cut(s) 130
BlsI GCNGC 7 cut(s) 44, 1111, 1258, 1588, 1882, 2053, 2121
Bme1390I CCNGG 3 cut(s) 246, 1592, 1986
Bme18I GGWCC 1 cut(s) 201
BmeT110I CYCGRG 1 cut(s) 107
BmgT120I GGNCC 3 cut(s) 4, 201, 1061
BmiI GGNNCC 3 cut(s) 501, 1158, 1759
BmrFI CCNGG 3 cut(s) 246, 1592, 1986
BmrI ACTGGG 3 cut(s) 1068, 1477, 1681
BmsI GCATC 4 cut(s) 748, 893, 1256, 1708
BmuI ACTGGG 3 cut(s) 1068, 1477, 1681
BpiI GAAGAC 3 cut(s) 15, 1485, 1863
BpmI CTGGAG 1 cut(s) 77
Bpu10I CCTNAGC 1 cut(s) 1775
BpuEI CTTGAG 1 cut(s) 899
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 6 cut(s) 130, 1080, 1260, 1590, 1949, 1985
BsaWI WCCGGW 2 cut(s) 32, 1614
BsaXI ACNNNNNCTCC 2 cut(s) 1992, 2022
Bsc4I CCNNNNNNNGG 8 cut(s) 752, 907, 1242, 1557, 1596, 1597, 1985, 1986
Bse3DI GCAATG 2 cut(s) 152, 1795
BseAI TCCGGA 2 cut(s) 32, 1614
BseBI CCWGG 3 cut(s) 246, 1592, 1986
BseDI CCNNGG 6 cut(s) 130, 1080, 1260, 1590, 1949, 1985
BseGI GGATG 4 cut(s) 688, 1271, 1600, 1606
BseLI CCNNNNNNNGG 8 cut(s) 752, 907, 1242, 1557, 1596, 1597, 1985, 1986
BseMI GCAATG 2 cut(s) 152, 1795
BseMII CTCAG 7 cut(s) 360, 473, 792, 954, 963, 1062, 1518
BseRI GAGGAG 1 cut(s) 319
BseSI GKGCMC 2 cut(s) 195, 1159
BseX3I CGGCCG 1 cut(s) 146
BseXI GCAGC 6 cut(s) 1121, 1268, 1573, 1867, 2038, 2131
BseYI CCCAGC 2 cut(s) 333, 401
BsgI GTGCAG 1 cut(s) 743
Bsh1236I CGCG 1 cut(s) 45
Bsh1285I CGRYCG 1 cut(s) 149
BshFI GGCC 8 cut(s) 5, 105, 148, 311, 871, 900, 1063, 1637
BshNI GGYRCC 2 cut(s) 1156, 1757
BsiEI CGRYCG 1 cut(s) 149
BsiHKAI GWGCWC 3 cut(s) 114, 460, 800
BsiHKCI CYCGRG 1 cut(s) 107
BsiSI CCGG 2 cut(s) 33, 1615
BslFI GGGAC 2 cut(s) 690, 967
BslI CCNNNNNNNGG 8 cut(s) 752, 907, 1242, 1557, 1596, 1597, 1985, 1986
BsmAI GTCTC 2 cut(s) 913, 952
BsmFI GGGAC 2 cut(s) 690, 967
BsnI GGCC 8 cut(s) 5, 105, 148, 311, 871, 900, 1063, 1637
BsoBI CYCGRG 1 cut(s) 107
Bsp1286I GDGCHC 5 cut(s) 114, 195, 460, 800, 1159
Bsp13I TCCGGA 2 cut(s) 32, 1614
Bsp1407I TGTACA 1 cut(s) 1965
Bsp143I GATC 4 cut(s) 253, 668, 822, 1792
BspACI CCGC 3 cut(s) 12, 43, 1202
BspANI GGCC 8 cut(s) 5, 105, 148, 311, 871, 900, 1063, 1637
BspCNI CTCAG 7 cut(s) 359, 472, 793, 955, 962, 1061, 1519
BspEI TCCGGA 2 cut(s) 32, 1614
BspFNI CGCG 1 cut(s) 45
BspHI TCATGA 1 cut(s) 1933
BspLI GGNNCC 3 cut(s) 501, 1158, 1759
BspMAI CTGCAG 1 cut(s) 1885
BspPI GGATC 1 cut(s) 1787
BspT107I GGYRCC 2 cut(s) 1156, 1757
BsrDI GCAATG 2 cut(s) 152, 1795
BsrGI TGTACA 1 cut(s) 1965
BssECI CCNNGG 6 cut(s) 130, 1080, 1260, 1590, 1949, 1985
BssMI GATC 4 cut(s) 253, 668, 822, 1792
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 3 cut(s) 130, 1080, 1260
Bst2UI CCWGG 3 cut(s) 246, 1592, 1986
Bst4CI ACNGT 7 cut(s) 188, 320, 423, 563, 818, 1439, 1904
Bst6I CTCTTC 1 cut(s) 1494
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 1 cut(s) 730
BstAUI TGTACA 1 cut(s) 1965
BstC8I GCNNGC 5 cut(s) 264, 542, 726, 1768, 1772
BstF5I GGATG 4 cut(s) 688, 1271, 1600, 1606
BstFNI CGCG 1 cut(s) 45
BstHHI GCGC 1 cut(s) 268
BstKTI GATC 4 cut(s) 256, 671, 825, 1795
BstMAI GTCTC 2 cut(s) 913, 952
BstMBI GATC 4 cut(s) 253, 668, 822, 1792
BstMCI CGRYCG 1 cut(s) 149
BstNI CCWGG 3 cut(s) 246, 1592, 1986
BstNSI RCATGY 5 cut(s) 266, 1133, 1580, 1686, 2133
BstSCI CCNGG 3 cut(s) 244, 1590, 1984
BstSFI CTRYAG 2 cut(s) 562, 1881
BstSLI GKGCMC 2 cut(s) 195, 1159
BstUI CGCG 1 cut(s) 45
BstV1I GCAGC 6 cut(s) 1121, 1268, 1573, 1867, 2038, 2131
BstV2I GAAGAC 3 cut(s) 15, 1485, 1863
BstX2I RGATCY 2 cut(s) 253, 668
BstXI CCANNNNNNTGG 1 cut(s) 245
BstYI RGATCY 2 cut(s) 253, 668
BstZI CGGCCG 1 cut(s) 146
BsuRI GGCC 8 cut(s) 5, 105, 148, 311, 871, 900, 1063, 1637
BtsCI GGATG 4 cut(s) 688, 1271, 1600, 1606
BtsI GCAGTG 1 cut(s) 1759
BtsIMutI CAGTG 3 cut(s) 800, 1056, 1759
Cac8I GCNNGC 5 cut(s) 264, 542, 726, 1768, 1772
CciI TCATGA 1 cut(s) 1933
CfoI GCGC 1 cut(s) 268
Cfr13I GGNCC 3 cut(s) 4, 201, 1061
CseI GACGC 1 cut(s) 40
Csp6I GTAC 3 cut(s) 321, 1890, 1966
CviQI GTAC 3 cut(s) 321, 1890, 1966
DpnI GATC 4 cut(s) 255, 670, 824, 1794
DpnII GATC 4 cut(s) 253, 668, 822, 1792
DraI TTTAAA 2 cut(s) 1174, 1624
DrdI GACNNNNNNGTC 1 cut(s) 1442
DseDI GACNNNNNNGTC 1 cut(s) 1442
EaeI YGGCCR 3 cut(s) 146, 898, 1635
EagI CGGCCG 1 cut(s) 146
Eam1104I CTCTTC 1 cut(s) 1494
EarI CTCTTC 1 cut(s) 1494
EciI GGCGGA 1 cut(s) 1217
Ecl136II GAGCTC 1 cut(s) 112
EclXI CGGCCG 1 cut(s) 146
Eco130I CCWWGG 3 cut(s) 130, 1080, 1260
Eco147I AGGCCT 1 cut(s) 871
Eco24I GRGCYC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 201
Eco52I CGGCCG 1 cut(s) 146
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 3 cut(s) 9, 681, 1518
Eco88I CYCGRG 1 cut(s) 107
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 3 cut(s) 244, 1590, 1984
EcoT14I CCWWGG 3 cut(s) 130, 1080, 1260
EcoT22I ATGCAT 1 cut(s) 1148
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 3 cut(s) 130, 1080, 1260
FalI AAGNNNNNCTT 4 cut(s) 1716, 1748, 1902, 1934
FaqI GGGAC 2 cut(s) 690, 967
FauNDI CATATG 1 cut(s) 1609
FbaI TGATCA 1 cut(s) 822
Fnu4HI GCNGC 7 cut(s) 43, 1110, 1257, 1587, 1881, 2052, 2120
FokI GGATG 4 cut(s) 695, 1278, 1607, 1613
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 7 cut(s) 43, 1110, 1257, 1587, 1881, 2052, 2120
FspBI CTAG 3 cut(s) 131, 944, 1958
GlaI GCGC 1 cut(s) 267
GluI GCNGC 7 cut(s) 43, 1110, 1257, 1587, 1881, 2052, 2120
GsaI CCCAGC 2 cut(s) 337, 405
GsuI CTGGAG 1 cut(s) 77
HaeIII GGCC 8 cut(s) 5, 105, 148, 311, 871, 900, 1063, 1637
HapII CCGG 2 cut(s) 33, 1615
HgaI GACGC 1 cut(s) 40
HhaI GCGC 1 cut(s) 268
Hin1I GRCGYC 1 cut(s) 51
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HindIII AAGCTT 1 cut(s) 1345
HinfI GANTC 6 cut(s) 29, 712, 998, 1402, 1443, 2096
HpaII CCGG 2 cut(s) 33, 1615
HphI GGTGA 4 cut(s) 375, 636, 767, 1844
Hpy166II GTNNAC 4 cut(s) 1135, 1462, 1708, 1966
Hpy188III TCNNGA 7 cut(s) 33, 94, 251, 916, 1615, 1733, 1934
Hpy8I GTNNAC 4 cut(s) 1135, 1462, 1708, 1966
Hpy99I CGWCG 2 cut(s) 50, 56
HpyAV CCTTC 6 cut(s) 301, 756, 999, 1192, 1491, 1846
HpyCH4III ACNGT 7 cut(s) 188, 320, 423, 563, 818, 1439, 1904
HpyCH4IV ACGT 4 cut(s) 83, 613, 1619, 2073
HpySE526I ACGT 4 cut(s) 83, 613, 1619, 2073
Hsp92I GRCGYC 1 cut(s) 51
HspAI GCGC 1 cut(s) 266
Kpn2I TCCGGA 2 cut(s) 32, 1614
Ksp22I TGATCA 1 cut(s) 822
Kzo9I GATC 4 cut(s) 253, 668, 822, 1792
LmnI GCTCC 3 cut(s) 212, 1253, 2063
Lsp1109I GCAGC 6 cut(s) 1121, 1268, 1573, 1867, 2038, 2131
LweI GCATC 4 cut(s) 748, 893, 1256, 1708
MaeI CTAG 3 cut(s) 131, 944, 1958
MaeII ACGT 4 cut(s) 83, 613, 1619, 2073
MaeIII GTNAC 8 cut(s) 523, 581, 1054, 1207, 1300, 1406, 1570, 1660
MalI GATC 4 cut(s) 255, 670, 824, 1794
MboI GATC 4 cut(s) 253, 668, 822, 1792
MfeI CAATTG 5 cut(s) 430, 1311, 1665, 2100, 2124
MflI RGATCY 2 cut(s) 253, 668
MhlI GDGCHC 5 cut(s) 114, 195, 460, 800, 1159
MlsI TGGCCA 2 cut(s) 900, 1637
MluNI TGGCCA 2 cut(s) 900, 1637
MlyI GAGTC 3 cut(s) 1007, 1452, 2105
MmeI TCCRAC 2 cut(s) 1458, 2073
Mox20I TGGCCA 2 cut(s) 900, 1637
Mph1103I ATGCAT 1 cut(s) 1148
MroI TCCGGA 2 cut(s) 32, 1614
MroXI GAANNNNTTC 2 cut(s) 988, 1347
MscI TGGCCA 2 cut(s) 900, 1637
MslI CAYNNNNRTG 1 cut(s) 1987
Msp20I TGGCCA 2 cut(s) 900, 1637
MspA1I CMGCKG 1 cut(s) 1112
MspI CCGG 2 cut(s) 33, 1615
MspR9I CCNGG 3 cut(s) 246, 1592, 1986
MunI CAATTG 5 cut(s) 430, 1311, 1665, 2100, 2124
MvaI CCWGG 3 cut(s) 246, 1592, 1986
MvnI CGCG 1 cut(s) 45
NdeI CATATG 1 cut(s) 1609
NdeII GATC 4 cut(s) 253, 668, 822, 1792
NlaIV GGNNCC 3 cut(s) 501, 1158, 1759
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 3 cut(s) 1054, 1207, 1660
NsiI ATGCAT 1 cut(s) 1148
NspI RCATGY 5 cut(s) 266, 1133, 1580, 1686, 2133
OliI CACNNNNGTG 1 cut(s) 1987
PaeI GCATGC 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 107
PagI TCATGA 1 cut(s) 1933
PceI AGGCCT 1 cut(s) 871
PciI ACATGT 2 cut(s) 1129, 1576
PdmI GAANNNNTTC 2 cut(s) 988, 1347
PfeI GAWTC 3 cut(s) 29, 712, 1402
PflFI GACNNNGTC 1 cut(s) 50
PflMI CCANNNNNTGG 1 cut(s) 1557
PkrI GCNGC 7 cut(s) 44, 1111, 1258, 1588, 1882, 2053, 2121
PleI GAGTC 3 cut(s) 1006, 1451, 2104
PpsI GAGTC 3 cut(s) 1006, 1451, 2104
PscI ACATGT 2 cut(s) 1129, 1576
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 3 cut(s) 244, 1590, 1984
PspFI CCCAGC 2 cut(s) 333, 401
PspGI CCWGG 3 cut(s) 244, 1590, 1984
PspN4I GGNNCC 3 cut(s) 501, 1158, 1759
PspPI GGNCC 3 cut(s) 4, 201, 1061
PspXI VCTCGAGB 1 cut(s) 107
PstI CTGCAG 1 cut(s) 1885
PsuI RGATCY 2 cut(s) 253, 668
PsyI GACNNNGTC 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 1112
RsaI GTAC 3 cut(s) 322, 1891, 1967
RsaNI GTAC 3 cut(s) 321, 1890, 1966
RseI CAYNNNNRTG 1 cut(s) 1987
SacI GAGCTC 1 cut(s) 114
SatI GCNGC 7 cut(s) 43, 1110, 1257, 1587, 1881, 2052, 2120
Sau3AI GATC 4 cut(s) 253, 668, 822, 1792
Sau96I GGNCC 3 cut(s) 4, 201, 1061
SchI GAGTC 3 cut(s) 1007, 1452, 2105
ScrFI CCNGG 3 cut(s) 246, 1592, 1986
SduI GDGCHC 5 cut(s) 114, 195, 460, 800, 1159
SfaNI GCATC 4 cut(s) 748, 893, 1256, 1708
SfcI CTRYAG 2 cut(s) 562, 1881
Sfr274I CTCGAG 1 cut(s) 107
SinI GGWCC 1 cut(s) 201
SlaI CTCGAG 1 cut(s) 107
SmiMI CAYNNNNRTG 1 cut(s) 1987
SmlI CTYRAG 2 cut(s) 107, 914
SmoI CTYRAG 2 cut(s) 107, 914
SpeI ACTAGT 1 cut(s) 1957
SphI GCATGC 1 cut(s) 266
SseBI AGGCCT 1 cut(s) 871
SsiI CCGC 3 cut(s) 12, 43, 1202
SspMI CTAG 3 cut(s) 131, 944, 1958
SstI GAGCTC 1 cut(s) 114
StuI AGGCCT 1 cut(s) 871
StyD4I CCNGG 3 cut(s) 244, 1590, 1984
StyI CCWWGG 3 cut(s) 130, 1080, 1260
TaaI ACNGT 7 cut(s) 188, 320, 423, 563, 818, 1439, 1904
TaiI ACGT 4 cut(s) 86, 616, 1622, 2076
TaqI TCGA 3 cut(s) 108, 410, 597
TatI WGTACW 1 cut(s) 1965
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 3 cut(s) 29, 712, 1402
TscAI CASTG 3 cut(s) 800, 1063, 1759
TseFI GTSAC 3 cut(s) 1054, 1207, 1660
TseI GCWGC 6 cut(s) 1109, 1256, 1586, 1880, 2051, 2119
Tsp45I GTSAC 3 cut(s) 1054, 1207, 1660
TspGWI ACGGA 1 cut(s) 1864
TspRI CASTG 3 cut(s) 800, 1063, 1759
Tth111I GACNNNGTC 1 cut(s) 50
Van91I CCANNNNNTGG 1 cut(s) 1557
VpaK11BI GGWCC 1 cut(s) 201
XceI RCATGY 5 cut(s) 266, 1133, 1580, 1686, 2133
XhoI CTCGAG 1 cut(s) 107
XmaJI CCTAGG 1 cut(s) 130
XmnI GAANNNNTTC 2 cut(s) 988, 1347
XspI CTAG 3 cut(s) 131, 944, 1958
Zsp2I ATGCAT 1 cut(s) 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.