BEST Arabidopsis thaliana protein match is hydroxyproline-rich glycoprotein family protein (TAIR AT1G21695.1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21695 AT1G77400 |
| fragaria_vesca | FvH4_2g27560 |
| malus_domestica | MD15G1344600.v1.1 |
| prunus_persica | Prupe.1G492300_v2.0.a1 |
| pyrus_communis | pycom15g30780 |
| rosa_chinensis | RchiOBHm_Chr6g0296401 |
| rosa_laevigata | RLG00000011696 |
| rosa_roxburghii | Rroxscaffold_7G00171580 Rroxscaffold_7G00178530 |
| rosa_rugosa | Rorug06G0262000 |
| rosa_samantha | Rh6BG381700 Rh6DG374300 |
| rosa_wichuraiana | Rw6G032560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 379 |
| AccB1I | GGYRCC | 1 cut(s) | 379 |
| AccBSI | CCGCTC | 2 cut(s) | 247, 345 |
| AccII | CGCG | 1 cut(s) | 238 |
| AciI | CCGC | 9 cut(s) | 61, 101, 104, 107, 122, 158, 247, 253, 345 |
| AcoI | YGGCCR | 2 cut(s) | 276, 533 |
| AfaI | GTAC | 4 cut(s) | 72, 183, 381, 509 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 167, 280, 445 |
| AgeI | ACCGGT | 1 cut(s) | 519 |
| AgsI | TTSAA | 2 cut(s) | 50, 428 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 490 |
| AjnI | CCWGG | 5 cut(s) | 31, 187, 203, 273, 278 |
| AleI | CACNNNNGTG | 1 cut(s) | 307 |
| Alw26I | GTCTC | 2 cut(s) | 324, 531 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 407 |
| Ama87I | CYCGRG | 2 cut(s) | 287, 305 |
| AoxI | GGCC | 2 cut(s) | 276, 533 |
| AsiGI | ACCGGT | 1 cut(s) | 519 |
| Asp718I | GGTACC | 1 cut(s) | 379 |
| AspLEI | GCGC | 1 cut(s) | 240 |
| AspS9I | GGNCC | 3 cut(s) | 171, 201, 284 |
| AsuC2I | CCSGG | 5 cut(s) | 66, 306, 307, 439, 457 |
| AsuHPI | GGTGA | 1 cut(s) | 294 |
| AvaI | CYCGRG | 2 cut(s) | 287, 305 |
| AvaII | GGWCC | 3 cut(s) | 171, 201, 284 |
| BalI | TGGCCA | 1 cut(s) | 278 |
| BanI | GGYRCC | 1 cut(s) | 379 |
| BceAI | ACGGC | 3 cut(s) | 94, 460, 548 |
| BciT130I | CCWGG | 5 cut(s) | 33, 189, 205, 275, 280 |
| BcnI | CCSGG | 5 cut(s) | 66, 306, 307, 439, 457 |
| BcoDI | GTCTC | 2 cut(s) | 324, 531 |
| BfaI | CTAG | 2 cut(s) | 372, 434 |
| BfmI | CTRYAG | 1 cut(s) | 412 |
| BisI | GCNGC | 2 cut(s) | 104, 107 |
| BlsI | GCNGC | 2 cut(s) | 105, 108 |
| Bme18I | GGWCC | 3 cut(s) | 171, 201, 284 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 490 |
| BmeT110I | CYCGRG | 2 cut(s) | 287, 305 |
| BmgT120I | GGNCC | 3 cut(s) | 171, 201, 284 |
| BmiI | GGNNCC | 4 cut(s) | 172, 285, 286, 381 |
| Bpu10I | CCTNAGC | 1 cut(s) | 384 |
| BpuMI | CCSGG | 5 cut(s) | 66, 306, 307, 439, 457 |
| BsaJI | CCNNGG | 5 cut(s) | 64, 197, 279, 305, 530 |
| BsaWI | WCCGGW | 1 cut(s) | 519 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 167, 280, 445 |
| Bse118I | RCCGGY | 2 cut(s) | 519, 535 |
| Bse3DI | GCAATG | 1 cut(s) | 229 |
| BseBI | CCWGG | 5 cut(s) | 33, 189, 205, 275, 280 |
| BseDI | CCNNGG | 5 cut(s) | 64, 197, 279, 305, 530 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 167, 280, 445 |
| BseMI | GCAATG | 1 cut(s) | 229 |
| BseMII | CTCAG | 2 cut(s) | 255, 375 |
| BseRI | GAGGAG | 1 cut(s) | 312 |
| BseX3I | CGGCCG | 1 cut(s) | 533 |
| Bsh1236I | CGCG | 1 cut(s) | 238 |
| Bsh1285I | CGRYCG | 2 cut(s) | 524, 536 |
| BshFI | GGCC | 2 cut(s) | 278, 535 |
| BshNI | GGYRCC | 1 cut(s) | 379 |
| BshTI | ACCGGT | 1 cut(s) | 519 |
| BsiEI | CGRYCG | 2 cut(s) | 524, 536 |
| BsiHKCI | CYCGRG | 2 cut(s) | 287, 305 |
| BsiSI | CCGG | 6 cut(s) | 66, 306, 439, 457, 520, 536 |
| BslFI | GGGAC | 1 cut(s) | 297 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 167, 280, 445 |
| BsmAI | GTCTC | 2 cut(s) | 324, 531 |
| BsmBI | CGTCTC | 1 cut(s) | 531 |
| BsmFI | GGGAC | 1 cut(s) | 297 |
| BsnI | GGCC | 2 cut(s) | 278, 535 |
| BsoBI | CYCGRG | 2 cut(s) | 287, 305 |
| BspACI | CCGC | 9 cut(s) | 61, 101, 104, 107, 122, 158, 247, 253, 345 |
| BspANI | GGCC | 2 cut(s) | 278, 535 |
| BspCNI | CTCAG | 2 cut(s) | 254, 376 |
| BspFNI | CGCG | 1 cut(s) | 238 |
| BspLI | GGNNCC | 4 cut(s) | 172, 285, 286, 381 |
| BspT107I | GGYRCC | 1 cut(s) | 379 |
| BsrBI | CCGCTC | 2 cut(s) | 247, 345 |
| BsrDI | GCAATG | 1 cut(s) | 229 |
| BsrFI | RCCGGY | 2 cut(s) | 519, 535 |
| BssAI | RCCGGY | 2 cut(s) | 519, 535 |
| BssECI | CCNNGG | 5 cut(s) | 64, 197, 279, 305, 530 |
| Bst2UI | CCWGG | 5 cut(s) | 33, 189, 205, 275, 280 |
| Bst4CI | ACNGT | 3 cut(s) | 379, 413, 492 |
| Bst6I | CTCTTC | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 1 cut(s) | 390 |
| BstDEI | CTNAG | 4 cut(s) | 143, 241, 329, 384 |
| BstDSI | CCRYGG | 2 cut(s) | 197, 530 |
| BstFNI | CGCG | 1 cut(s) | 238 |
| BstHHI | GCGC | 1 cut(s) | 240 |
| BstMAI | GTCTC | 2 cut(s) | 324, 531 |
| BstMCI | CGRYCG | 2 cut(s) | 524, 536 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 244, 554 |
| BstNI | CCWGG | 5 cut(s) | 33, 189, 205, 275, 280 |
| BstSFI | CTRYAG | 1 cut(s) | 412 |
| BstUI | CGCG | 1 cut(s) | 238 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 51 |
| BstZI | CGGCCG | 1 cut(s) | 533 |
| BsuRI | GGCC | 2 cut(s) | 278, 535 |
| BtgI | CCRYGG | 2 cut(s) | 197, 530 |
| Cac8I | GCNNGC | 1 cut(s) | 390 |
| CaiI | CAGNNNCTG | 1 cut(s) | 407 |
| CfoI | GCGC | 1 cut(s) | 240 |
| Cfr10I | RCCGGY | 2 cut(s) | 519, 535 |
| Cfr13I | GGNCC | 3 cut(s) | 171, 201, 284 |
| Cfr9I | CCCGGG | 1 cut(s) | 305 |
| CseI | GACGC | 1 cut(s) | 554 |
| CsiI | ACCWGGT | 1 cut(s) | 203 |
| Csp6I | GTAC | 4 cut(s) | 71, 182, 380, 508 |
| CspAI | ACCGGT | 1 cut(s) | 519 |
| CviJI | RGCY | 6 cut(s) | 196, 265, 278, 388, 437, 535 |
| CviKI_1 | RGCY | 6 cut(s) | 196, 265, 278, 388, 437, 535 |
| CviQI | GTAC | 4 cut(s) | 71, 182, 380, 508 |
| DdeI | CTNAG | 4 cut(s) | 143, 241, 329, 384 |
| DriI | GACNNNNNGTC | 1 cut(s) | 490 |
| EaeI | YGGCCR | 2 cut(s) | 276, 533 |
| EagI | CGGCCG | 1 cut(s) | 533 |
| Eam1104I | CTCTTC | 1 cut(s) | 353 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 490 |
| EarI | CTCTTC | 1 cut(s) | 353 |
| EciI | GGCGGA | 1 cut(s) | 50 |
| EclXI | CGGCCG | 1 cut(s) | 533 |
| Eco47I | GGWCC | 3 cut(s) | 171, 201, 284 |
| Eco52I | CGGCCG | 1 cut(s) | 533 |
| Eco88I | CYCGRG | 2 cut(s) | 287, 305 |
| EcoO109I | RGGNCCY | 1 cut(s) | 284 |
| EcoRII | CCWGG | 5 cut(s) | 31, 187, 203, 273, 278 |
| Esp3I | CGTCTC | 1 cut(s) | 531 |
| FaiI | YATR | 1 cut(s) | 18 |
| FaqI | GGGAC | 1 cut(s) | 297 |
| FauI | CCCGC | 1 cut(s) | 338 |
| Fnu4HI | GCNGC | 2 cut(s) | 104, 107 |
| Fsp4HI | GCNGC | 2 cut(s) | 104, 107 |
| FspBI | CTAG | 2 cut(s) | 372, 434 |
| GlaI | GCGC | 1 cut(s) | 239 |
| GluI | GCNGC | 2 cut(s) | 104, 107 |
| HaeIII | GGCC | 2 cut(s) | 278, 535 |
| HapII | CCGG | 6 cut(s) | 66, 306, 439, 457, 520, 536 |
| HgaI | GACGC | 1 cut(s) | 554 |
| HhaI | GCGC | 1 cut(s) | 240 |
| Hin6I | GCGC | 1 cut(s) | 238 |
| HinP1I | GCGC | 1 cut(s) | 238 |
| HinfI | GANTC | 2 cut(s) | 485, 567 |
| HpaII | CCGG | 6 cut(s) | 66, 306, 439, 457, 520, 536 |
| HphI | GGTGA | 1 cut(s) | 294 |
| Hpy166II | GTNNAC | 1 cut(s) | 149 |
| Hpy188I | TCNGA | 4 cut(s) | 244, 403, 421, 566 |
| Hpy188III | TCNNGA | 1 cut(s) | 25 |
| Hpy8I | GTNNAC | 1 cut(s) | 149 |
| Hpy99I | CGWCG | 2 cut(s) | 499, 508 |
| HpyCH4III | ACNGT | 3 cut(s) | 379, 413, 492 |
| HpyCH4V | TGCA | 1 cut(s) | 227 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 244, 554 |
| HpyF3I | CTNAG | 4 cut(s) | 143, 241, 329, 384 |
| HspAI | GCGC | 1 cut(s) | 238 |
| KflI | GGGWCCC | 1 cut(s) | 284 |
| KpnI | GGTACC | 1 cut(s) | 383 |
| LmnI | GCTCC | 1 cut(s) | 35 |
| MabI | ACCWGGT | 1 cut(s) | 203 |
| MaeI | CTAG | 2 cut(s) | 372, 434 |
| MaeIII | GTNAC | 4 cut(s) | 111, 300, 482, 542 |
| MbiI | CCGCTC | 2 cut(s) | 247, 345 |
| MboII | GAAGA | 3 cut(s) | 345, 370, 444 |
| MlsI | TGGCCA | 1 cut(s) | 278 |
| MluNI | TGGCCA | 1 cut(s) | 278 |
| MlyI | GAGTC | 2 cut(s) | 479, 561 |
| MmeI | TCCRAC | 1 cut(s) | 106 |
| MnlI | CCTC | 1 cut(s) | 333 |
| Mox20I | TGGCCA | 1 cut(s) | 278 |
| MscI | TGGCCA | 1 cut(s) | 278 |
| MslI | CAYNNNNRTG | 2 cut(s) | 49, 307 |
| Msp20I | TGGCCA | 1 cut(s) | 278 |
| MspI | CCGG | 6 cut(s) | 66, 306, 439, 457, 520, 536 |
| MvaI | CCWGG | 5 cut(s) | 33, 189, 205, 275, 280 |
| MvnI | CGCG | 1 cut(s) | 238 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 244, 554 |
| NciI | CCSGG | 5 cut(s) | 66, 306, 307, 439, 457 |
| NlaIV | GGNNCC | 4 cut(s) | 172, 285, 286, 381 |
| NmuCI | GTSAC | 3 cut(s) | 300, 482, 542 |
| OliI | CACNNNNGTG | 1 cut(s) | 307 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 500, 503, 509 |
| PflFI | GACNNNGTC | 1 cut(s) | 205 |
| PfoI | TCCNGGA | 1 cut(s) | 455 |
| PinAI | ACCGGT | 1 cut(s) | 519 |
| PkrI | GCNGC | 2 cut(s) | 105, 108 |
| PleI | GAGTC | 2 cut(s) | 479, 561 |
| PpsI | GAGTC | 2 cut(s) | 479, 561 |
| PpuMI | RGGWCCY | 1 cut(s) | 284 |
| Psp5II | RGGWCCY | 1 cut(s) | 284 |
| Psp6I | CCWGG | 5 cut(s) | 31, 187, 203, 273, 278 |
| PspGI | CCWGG | 5 cut(s) | 31, 187, 203, 273, 278 |
| PspN4I | GGNNCC | 4 cut(s) | 172, 285, 286, 381 |
| PspPI | GGNCC | 3 cut(s) | 171, 201, 284 |
| PspPPI | RGGWCCY | 1 cut(s) | 284 |
| PstNI | CAGNNNCTG | 1 cut(s) | 407 |
| PsyI | GACNNNGTC | 1 cut(s) | 205 |
| RsaI | GTAC | 4 cut(s) | 72, 183, 381, 509 |
| RsaNI | GTAC | 4 cut(s) | 71, 182, 380, 508 |
| RseI | CAYNNNNRTG | 2 cut(s) | 49, 307 |
| SatI | GCNGC | 2 cut(s) | 104, 107 |
| Sau96I | GGNCC | 3 cut(s) | 171, 201, 284 |
| SchI | GAGTC | 2 cut(s) | 479, 561 |
| SetI | ASST | 4 cut(s) | 209, 385, 409, 426 |
| SexAI | ACCWGGT | 1 cut(s) | 203 |
| SfcI | CTRYAG | 1 cut(s) | 412 |
| SinI | GGWCC | 3 cut(s) | 171, 201, 284 |
| SmaI | CCCGGG | 1 cut(s) | 307 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 49, 307 |
| SsiI | CCGC | 9 cut(s) | 61, 101, 104, 107, 122, 158, 247, 253, 345 |
| SspMI | CTAG | 2 cut(s) | 372, 434 |
| TaaI | ACNGT | 3 cut(s) | 379, 413, 492 |
| TaqI | TCGA | 1 cut(s) | 497 |
| TauI | GCSGC | 2 cut(s) | 106, 109 |
| TseFI | GTSAC | 3 cut(s) | 300, 482, 542 |
| Tsp45I | GTSAC | 3 cut(s) | 300, 482, 542 |
| TspGWI | ACGGA | 3 cut(s) | 163, 214, 470 |
| TspMI | CCCGGG | 1 cut(s) | 305 |
| Tth111I | GACNNNGTC | 1 cut(s) | 205 |
| VpaK11BI | GGWCC | 3 cut(s) | 171, 201, 284 |
| XmaI | CCCGGG | 1 cut(s) | 305 |
| XspI | CTAG | 2 cut(s) | 372, 434 |