BEST Arabidopsis thaliana protein match is hydroxyproline-rich glycoprotein family protein (TAIR AT1G21695.1)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21695 AT1G77400 |
| fragaria_vesca | FvH4_2g27560 |
| malus_domestica | MD15G1344600.v1.1 |
| prunus_persica | Prupe.1G492300_v2.0.a1 |
| pyrus_communis | pycom15g30780 |
| rosa_chinensis | RchiOBHm_Chr6g0296401 |
| rosa_laevigata | RLG00000011696 |
| rosa_roxburghii | Rroxscaffold_7G00171580 Rroxscaffold_7G00178530 |
| rosa_rugosa | Rorug06G0262000 |
| rosa_samantha | Rh6BG381700 Rh6DG374300 |
| rosa_wichuraiana | Rw6G032560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 406 |
| AccBSI | CCGCTC | 3 cut(s) | 228, 237, 390 |
| AccI | GTMKAC | 1 cut(s) | 518 |
| AccII | CGCG | 3 cut(s) | 460, 515, 553 |
| AcoI | YGGCCR | 1 cut(s) | 327 |
| AcuI | CTGAAG | 2 cut(s) | 146, 228 |
| AcyI | GRCGYC | 2 cut(s) | 78, 125 |
| AfaI | GTAC | 1 cut(s) | 414 |
| AfeI | AGCGCT | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 182, 219, 270 |
| AgsI | TTSAA | 1 cut(s) | 303 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AluBI | AGCT | 2 cut(s) | 166, 248 |
| AluI | AGCT | 2 cut(s) | 166, 248 |
| Alw26I | GTCTC | 3 cut(s) | 348, 443, 480 |
| Ama87I | CYCGRG | 1 cut(s) | 416 |
| Aor51HI | AGCGCT | 1 cut(s) | 269 |
| AoxI | GGCC | 2 cut(s) | 327, 576 |
| ApeKI | GCWGC | 2 cut(s) | 369, 487 |
| AspLEI | GCGC | 2 cut(s) | 270, 460 |
| AspS9I | GGNCC | 4 cut(s) | 222, 261, 442, 576 |
| AsuC2I | CCSGG | 4 cut(s) | 75, 184, 259, 580 |
| AsuHPI | GGTGA | 1 cut(s) | 501 |
| AvaI | CYCGRG | 1 cut(s) | 416 |
| AvaII | GGWCC | 3 cut(s) | 222, 261, 442 |
| BaeGI | GKGCMC | 1 cut(s) | 411 |
| BanI | GGYRCC | 1 cut(s) | 406 |
| BanII | GRGCYC | 1 cut(s) | 213 |
| BbsI | GAAGAC | 1 cut(s) | 537 |
| BbvI | GCAGC | 2 cut(s) | 381, 474 |
| BccI | CCATC | 1 cut(s) | 187 |
| BceAI | ACGGC | 2 cut(s) | 118, 481 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BcnI | CCSGG | 4 cut(s) | 75, 184, 259, 580 |
| BcoDI | GTCTC | 3 cut(s) | 348, 443, 480 |
| BfaI | CTAG | 1 cut(s) | 399 |
| BfoI | RGCGCY | 1 cut(s) | 271 |
| BisI | GCNGC | 4 cut(s) | 128, 131, 370, 488 |
| BlsI | GCNGC | 4 cut(s) | 129, 132, 371, 489 |
| Bme1390I | CCNGG | 5 cut(s) | 42, 75, 184, 259, 580 |
| Bme18I | GGWCC | 3 cut(s) | 222, 261, 442 |
| BmeT110I | CYCGRG | 1 cut(s) | 416 |
| BmgT120I | GGNCC | 4 cut(s) | 222, 261, 442, 576 |
| BmiI | GGNNCC | 3 cut(s) | 210, 224, 408 |
| BmrFI | CCNGG | 5 cut(s) | 42, 75, 184, 259, 580 |
| BmsI | GCATC | 1 cut(s) | 556 |
| BpiI | GAAGAC | 1 cut(s) | 537 |
| BpuEI | CTTGAG | 1 cut(s) | 467 |
| BpuMI | CCSGG | 4 cut(s) | 75, 184, 259, 580 |
| BsaHI | GRCGYC | 2 cut(s) | 78, 125 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 379, 409 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 182, 219, 270 |
| Bse118I | RCCGGY | 1 cut(s) | 329 |
| Bse1I | ACTGG | 1 cut(s) | 459 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseGI | GGATG | 1 cut(s) | 179 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 182, 219, 270 |
| BseMII | CTCAG | 1 cut(s) | 344 |
| BseNI | ACTGG | 1 cut(s) | 459 |
| BseRI | GAGGAG | 1 cut(s) | 336 |
| BseSI | GKGCMC | 1 cut(s) | 411 |
| BseX3I | CGGCCG | 1 cut(s) | 327 |
| BseXI | GCAGC | 2 cut(s) | 381, 474 |
| Bsh1236I | CGCG | 3 cut(s) | 460, 515, 553 |
| Bsh1285I | CGRYCG | 1 cut(s) | 330 |
| BshFI | GGCC | 2 cut(s) | 329, 578 |
| BshNI | GGYRCC | 1 cut(s) | 406 |
| BsiEI | CGRYCG | 1 cut(s) | 330 |
| BsiHKCI | CYCGRG | 1 cut(s) | 416 |
| BsiSI | CCGG | 6 cut(s) | 75, 183, 206, 259, 330, 579 |
| BslFI | GGGAC | 1 cut(s) | 65 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 182, 219, 270 |
| BsmAI | GTCTC | 3 cut(s) | 348, 443, 480 |
| BsmBI | CGTCTC | 1 cut(s) | 480 |
| BsmFI | GGGAC | 1 cut(s) | 65 |
| BsmI | GAATGC | 1 cut(s) | 145 |
| BsnI | GGCC | 2 cut(s) | 329, 578 |
| BsoBI | CYCGRG | 1 cut(s) | 416 |
| Bsp1286I | GDGCHC | 2 cut(s) | 213, 411 |
| Bsp143I | GATC | 1 cut(s) | 308 |
| BspANI | GGCC | 2 cut(s) | 329, 578 |
| BspCNI | CTCAG | 1 cut(s) | 345 |
| BspFNI | CGCG | 3 cut(s) | 460, 515, 553 |
| BspLI | GGNNCC | 3 cut(s) | 210, 224, 408 |
| BspT107I | GGYRCC | 1 cut(s) | 406 |
| BsrBI | CCGCTC | 3 cut(s) | 228, 237, 390 |
| BsrFI | RCCGGY | 1 cut(s) | 329 |
| BsrI | ACTGG | 1 cut(s) | 459 |
| BssAI | RCCGGY | 1 cut(s) | 329 |
| BssMI | GATC | 1 cut(s) | 308 |
| BssNI | GRCGYC | 2 cut(s) | 78, 125 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| Bst4CI | ACNGT | 2 cut(s) | 141, 406 |
| Bst6I | CTCTTC | 1 cut(s) | 354 |
| BstACI | GRCGYC | 2 cut(s) | 78, 125 |
| BstC8I | GCNNGC | 1 cut(s) | 272 |
| BstDEI | CTNAG | 1 cut(s) | 353 |
| BstF5I | GGATG | 1 cut(s) | 179 |
| BstFNI | CGCG | 3 cut(s) | 460, 515, 553 |
| BstH2I | RGCGCY | 1 cut(s) | 271 |
| BstHHI | GCGC | 2 cut(s) | 270, 460 |
| BstKTI | GATC | 1 cut(s) | 311 |
| BstMAI | GTCTC | 3 cut(s) | 348, 443, 480 |
| BstMBI | GATC | 1 cut(s) | 308 |
| BstMCI | CGRYCG | 1 cut(s) | 330 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 124, 234, 280, 375, 493, 575 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstSCI | CCNGG | 5 cut(s) | 40, 73, 182, 257, 578 |
| BstSLI | GKGCMC | 1 cut(s) | 411 |
| BstUI | CGCG | 3 cut(s) | 460, 515, 553 |
| BstV1I | GCAGC | 2 cut(s) | 381, 474 |
| BstV2I | GAAGAC | 1 cut(s) | 537 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 60 |
| BstZI | CGGCCG | 1 cut(s) | 327 |
| BsuRI | GGCC | 2 cut(s) | 329, 578 |
| BtsCI | GGATG | 1 cut(s) | 179 |
| BtsIMutI | CAGTG | 2 cut(s) | 65, 452 |
| Cac8I | GCNNGC | 1 cut(s) | 272 |
| CfoI | GCGC | 2 cut(s) | 270, 460 |
| Cfr10I | RCCGGY | 1 cut(s) | 329 |
| Cfr13I | GGNCC | 4 cut(s) | 222, 261, 442, 576 |
| CpoI | CGGWCCG | 1 cut(s) | 261 |
| CseI | GACGC | 3 cut(s) | 67, 133, 504 |
| Csp6I | GTAC | 1 cut(s) | 413 |
| CspI | CGGWCCG | 1 cut(s) | 261 |
| CviJI | RGCY | 6 cut(s) | 166, 211, 248, 317, 329, 578 |
| CviKI_1 | RGCY | 6 cut(s) | 166, 211, 248, 317, 329, 578 |
| CviQI | GTAC | 1 cut(s) | 413 |
| DdeI | CTNAG | 1 cut(s) | 353 |
| DpnI | GATC | 1 cut(s) | 310 |
| DpnII | GATC | 1 cut(s) | 308 |
| EaeI | YGGCCR | 1 cut(s) | 327 |
| EagI | CGGCCG | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 1 cut(s) | 354 |
| EarI | CTCTTC | 1 cut(s) | 354 |
| EciI | GGCGGA | 1 cut(s) | 192 |
| EclXI | CGGCCG | 1 cut(s) | 327 |
| Eco24I | GRGCYC | 1 cut(s) | 213 |
| Eco47I | GGWCC | 3 cut(s) | 222, 261, 442 |
| Eco47III | AGCGCT | 1 cut(s) | 269 |
| Eco52I | CGGCCG | 1 cut(s) | 327 |
| Eco57I | CTGAAG | 2 cut(s) | 146, 228 |
| Eco88I | CYCGRG | 1 cut(s) | 416 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| EcoT38I | GRGCYC | 1 cut(s) | 213 |
| Esp3I | CGTCTC | 1 cut(s) | 480 |
| FaiI | YATR | 1 cut(s) | 341 |
| FaqI | GGGAC | 1 cut(s) | 65 |
| FauI | CCCGC | 4 cut(s) | 183, 233, 520, 558 |
| FblI | GTMKAC | 1 cut(s) | 518 |
| Fnu4HI | GCNGC | 4 cut(s) | 128, 131, 370, 488 |
| FokI | GGATG | 1 cut(s) | 166 |
| FriOI | GRGCYC | 1 cut(s) | 213 |
| Fsp4HI | GCNGC | 4 cut(s) | 128, 131, 370, 488 |
| FspBI | CTAG | 1 cut(s) | 399 |
| GlaI | GCGC | 2 cut(s) | 269, 459 |
| GluI | GCNGC | 4 cut(s) | 128, 131, 370, 488 |
| HaeII | RGCGCY | 1 cut(s) | 271 |
| HaeIII | GGCC | 2 cut(s) | 329, 578 |
| HapII | CCGG | 6 cut(s) | 75, 183, 206, 259, 330, 579 |
| HgaI | GACGC | 3 cut(s) | 67, 133, 504 |
| HhaI | GCGC | 2 cut(s) | 270, 460 |
| Hin1I | GRCGYC | 2 cut(s) | 78, 125 |
| Hin6I | GCGC | 2 cut(s) | 268, 458 |
| HinP1I | GCGC | 2 cut(s) | 268, 458 |
| HincII | GTYRAC | 1 cut(s) | 519 |
| HindII | GTYRAC | 1 cut(s) | 519 |
| HinfI | GANTC | 2 cut(s) | 419, 588 |
| HpaII | CCGG | 6 cut(s) | 75, 183, 206, 259, 330, 579 |
| HphI | GGTGA | 1 cut(s) | 501 |
| Hpy166II | GTNNAC | 1 cut(s) | 519 |
| Hpy188I | TCNGA | 6 cut(s) | 222, 265, 313, 354, 424, 480 |
| Hpy188III | TCNNGA | 2 cut(s) | 252, 303 |
| Hpy8I | GTNNAC | 1 cut(s) | 519 |
| Hpy99I | CGWCG | 2 cut(s) | 328, 520 |
| HpyAV | CCTTC | 3 cut(s) | 170, 241, 252 |
| HpyCH4III | ACNGT | 2 cut(s) | 141, 406 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 124, 234, 280, 375, 493, 575 |
| HpyF3I | CTNAG | 1 cut(s) | 353 |
| Hsp92I | GRCGYC | 2 cut(s) | 78, 125 |
| HspAI | GCGC | 2 cut(s) | 268, 458 |
| Kzo9I | GATC | 1 cut(s) | 308 |
| LmnI | GCTCC | 5 cut(s) | 44, 208, 233, 242, 387 |
| Lsp1109I | GCAGC | 2 cut(s) | 381, 474 |
| LweI | GCATC | 1 cut(s) | 556 |
| MaeI | CTAG | 1 cut(s) | 399 |
| MaeIII | GTNAC | 2 cut(s) | 135, 503 |
| MalI | GATC | 1 cut(s) | 310 |
| MbiI | CCGCTC | 3 cut(s) | 228, 237, 390 |
| MboI | GATC | 1 cut(s) | 308 |
| MboII | GAAGA | 2 cut(s) | 341, 537 |
| MhlI | GDGCHC | 2 cut(s) | 213, 411 |
| MluCI | AATT | 2 cut(s) | 66, 110 |
| MlyI | GAGTC | 2 cut(s) | 428, 582 |
| MnlI | CCTC | 4 cut(s) | 210, 348, 357, 532 |
| MseI | TTAA | 1 cut(s) | 69 |
| MslI | CAYNNNNRTG | 1 cut(s) | 58 |
| MspI | CCGG | 6 cut(s) | 75, 183, 206, 259, 330, 579 |
| MspR9I | CCNGG | 5 cut(s) | 42, 75, 184, 259, 580 |
| Mva1269I | GAATGC | 1 cut(s) | 145 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| MvnI | CGCG | 3 cut(s) | 460, 515, 553 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 124, 234, 280, 375, 493, 575 |
| NciI | CCSGG | 4 cut(s) | 75, 184, 259, 580 |
| NdeII | GATC | 1 cut(s) | 308 |
| NlaIV | GGNNCC | 3 cut(s) | 210, 224, 408 |
| NmuCI | GTSAC | 1 cut(s) | 135 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 131, 530 |
| PctI | GAATGC | 1 cut(s) | 145 |
| PflFI | GACNNNGTC | 1 cut(s) | 523 |
| PkrI | GCNGC | 4 cut(s) | 129, 132, 371, 489 |
| PleI | GAGTC | 2 cut(s) | 427, 582 |
| PpsI | GAGTC | 2 cut(s) | 427, 582 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| PspN4I | GGNNCC | 3 cut(s) | 210, 224, 408 |
| PspPI | GGNCC | 4 cut(s) | 222, 261, 442, 576 |
| PsyI | GACNNNGTC | 1 cut(s) | 523 |
| RsaI | GTAC | 1 cut(s) | 414 |
| RsaNI | GTAC | 1 cut(s) | 413 |
| RseI | CAYNNNNRTG | 1 cut(s) | 58 |
| Rsr2I | CGGWCCG | 1 cut(s) | 261 |
| RsrII | CGGWCCG | 1 cut(s) | 261 |
| SalI | GTCGAC | 1 cut(s) | 517 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| SatI | GCNGC | 4 cut(s) | 128, 131, 370, 488 |
| Sau3AI | GATC | 1 cut(s) | 308 |
| Sau96I | GGNCC | 4 cut(s) | 222, 261, 442, 576 |
| SchI | GAGTC | 2 cut(s) | 428, 582 |
| ScrFI | CCNGG | 5 cut(s) | 42, 75, 184, 259, 580 |
| SduI | GDGCHC | 2 cut(s) | 213, 411 |
| SetI | ASST | 6 cut(s) | 162, 168, 250, 447, 524, 545 |
| SfaNI | GCATC | 1 cut(s) | 556 |
| SinI | GGWCC | 3 cut(s) | 222, 261, 442 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 58 |
| SmlI | CTYRAG | 1 cut(s) | 446 |
| SmoI | CTYRAG | 1 cut(s) | 446 |
| Sse9I | AATT | 2 cut(s) | 66, 110 |
| SspMI | CTAG | 1 cut(s) | 399 |
| StyD4I | CCNGG | 5 cut(s) | 40, 73, 182, 257, 578 |
| TaaI | ACNGT | 2 cut(s) | 141, 406 |
| TaqI | TCGA | 2 cut(s) | 253, 518 |
| TasI | AATT | 2 cut(s) | 66, 110 |
| TauI | GCSGC | 2 cut(s) | 130, 133 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| TscAI | CASTG | 2 cut(s) | 65, 459 |
| TseFI | GTSAC | 1 cut(s) | 135 |
| TseI | GCWGC | 2 cut(s) | 369, 487 |
| Tsp45I | GTSAC | 1 cut(s) | 135 |
| TspGWI | ACGGA | 1 cut(s) | 491 |
| TspRI | CASTG | 2 cut(s) | 65, 459 |
| Tth111I | GACNNNGTC | 1 cut(s) | 523 |
| VpaK11BI | GGWCC | 3 cut(s) | 222, 261, 442 |
| XmiI | GTMKAC | 1 cut(s) | 518 |
| XspI | CTAG | 1 cut(s) | 399 |