FvH4_2g29361

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0006671
Physical Location & Seq
Reverse (-)
22788731 .. 22790497
1767 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29361.t1

Sequence Viewer

Length: 1767 bp
ATGAAGCTGATCATCAAAACCAGAGAAGCAGAGCAGAGCTGCTTAGCTCTACTCCAGATATGCGACGTCGTTTCGAAGCTGAAGCAAATCCAGGCTCACATTGTCAAACTGGGCCTCCGGAACAACCCCTTGGTGCTGACCAAGTTCGCCGCCACCGCCTCCGACCTCAAAGCCGTCGACTACGCCTCGTCCGTCCTGTTCTCGCCGGATTCCGATACGCATTTATACGATGCTTTTCTCTTCAATACCATTATCAGAGCTTACGCTCATACCAGTCACGCGAAGCGTAAAGCTTTGTGGTTTTACAGGGTCATGGTTAAAGGTGGAGTCTTGCCTAATAAATTCACCTACCCTTTTGTTCTTAAGGGCTGTGCTGGAGTTGGGGACTTGAATTTGGGGAAGTCGGTTCATGGTTCGGTGGTGAAATACGGGTTTGGTGATGATGTTCATGTCCGGAACACCATGGTTCATATGTATTGTTGCAGCGGTGGAGGGGTTGAGAGTGCACGGAAGGTGTTTGATGAAATGCCGAGCTCGGATTCTGTTGCGTGGAGCGCGATGATTGGTGGGTATGTGAGGGTGGGGTGGTCTAGCGACGCGGTGGAGATGTTTAGGGAGATGCAGATGAGGGGAGTGAGGCCGGATGAGGTTACTATGGTTTCGGTTTTGTCTGCGTGTACCGATTTGGGTGCGCTAGAGCTTGGGAAGTGGGTGGAGTCCTACATTGAGAAAGAGGGGATTCAGAAGAGTGTGGAGCTTTGTAACGCGCTGATTGATATGTTTGCGAAATGTGGGAATGTTGATAAGGCGTTGAAGCTGTTTAGGAGGATGAGTGGGAGAACAATTGTTTCTTGGACTTCTGTGATTGATGGTTTGGCAATGCATGGGCGCGGGGAGGAGGCTGTTGGATTGTTTGAGGAAATGATTGGAGATGGGGTGGAGCCGGATGATGTTGCGTTTATAGGACTGCTTTCGGCTTGTAGTCATTCCGGATTGGTTGATGAGGGGAAGAGGTACTTCAGTATGATGGTGGAAAGATTTAGTTGTGTACCTAAGATAGAACACTATGGATGCATGGTGGATATGTTATGCAGGGCTGGACGTGTCAAAGAGGCATTGGAGTTTATTCGTAAAATGCCTATTAAGCCAAATCCGATAGTTTTGCGAACGCTGATCAGTGCTTGCCGTGCGCATGGGGAGCTTAAGCTTGGAGAGAGCATCACCAAAGAGTTAATCAGGGCTGAACCCATGCACGAGTCAAATTATGTCCTGCTGTCCAACATCTATGCAAAAATGAACCATTGGGAGAAGAAAACCAAGACTAGAGAGGCGATGGACAAGAAAGGGATGAAAAAGATCCCTGGGAGCACTATGATTGAGCTAGATAATGAAATTTATGAATTTGTGGCGGGAGATAAATCGCATAAACAGTCCAAAGAGATTTATGAGATGGTGGATGAAATGGGGAGGAAGATGAAGAGGGCTGGCTATGTTGCCACTACATCAGAGGTTTTGCTAGATATTGATGAAGAAGATAAAGAAGATGCTTTAAATAGGCATAGTGAAAAGTTGGCCATTGCCTTCGCCCTTCTGAACACGCCACCGGGAACTCCTATTCGCATAGTAAAGAATCTGCGGGTTTGTGAGGACTGCCACTCTGCTACTAAGTTCATCTCTAAGATTTATAATCGAGAAATAGTGGTGAGGGACCGAAACAGGTTTCACCATTTCAAGAATGGTCTGTGCTCCTGTAAAGGTTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

589

Amino Acids

65.94

Weight (kDa)

8.5

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 77 - 125 2.6e-07 PPR repeat family
PPR_2 PF13041 180 - 226 4e-10 PPR repeat family
PPR PF01535 182 - 212 1.9e-07 PPR repeat
PPR PF01535 254 - 279 3.6e-06 PPR repeat
PPR_2 PF13041 281 - 328 6.1e-10 PPR repeat family
PPR PF01535 283 - 313 1.9e-08 PPR repeat
PPR_1 PF12854 349 - 379 2.9e-07 PPR repeat
E_motif PF20431 398 - 460 8.8e-14 E motif
Eplus_motif PF20430 465 - 492 1.1e-07 E+ motif
DYW_deaminase PF14432 496 - 588 8.2e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1686
AatII GACGTC 1 cut(s) 69
Acc16I TGCGCA 1 cut(s) 1191
AccI GTMKAC 1 cut(s) 177
AccII CGCG 5 cut(s) 281, 557, 599, 767, 891
AccIII TCCGGA 3 cut(s) 117, 453, 989
AciI CCGC 7 cut(s) 150, 156, 486, 599, 891, 1409, 1636
AclWI GGATC 1 cut(s) 1351
AcoI YGGCCR 1 cut(s) 1572
AcsI RAATTY 4 cut(s) 341, 391, 1392, 1400
AcuI CTGAAG 2 cut(s) 101, 1003
AcyI GRCGYC 1 cut(s) 66
AfaI GTAC 3 cut(s) 679, 1016, 1050
AflII CTTAAG 2 cut(s) 362, 1202
AflIII ACRYGT 1 cut(s) 1102
AgsI TTSAA 4 cut(s) 244, 391, 814, 1732
AjiI CACGTC 1 cut(s) 1103
AjnI CCWGG 2 cut(s) 90, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
Alw21I GWGCWC 4 cut(s) 508, 536, 1370, 1748
Alw44I GTGCAC 1 cut(s) 504
AlwI GGATC 1 cut(s) 1351
Aor13HI TCCGGA 3 cut(s) 117, 453, 989
AoxI GGCC 3 cut(s) 112, 638, 1572
ApaLI GTGCAC 1 cut(s) 504
ApeKI GCWGC 2 cut(s) 39, 483
ApoI RAATTY 4 cut(s) 341, 391, 1392, 1400
AspLEI GCGC 5 cut(s) 557, 694, 769, 891, 1192
AspS9I GGNCC 2 cut(s) 112, 1708
AsuC2I CCSGG 1 cut(s) 1605
AsuHPI GGTGA 6 cut(s) 337, 433, 449, 1213, 1714, 1715
AsuII TTCGAA 1 cut(s) 74
AvaII GGWCC 1 cut(s) 1708
BaeGI GKGCMC 1 cut(s) 508
BaeI ACNNNNGTAYC 2 cut(s) 1006, 1039
BalI TGGCCA 1 cut(s) 1574
BanII GRGCYC 1 cut(s) 536
BauI CACGAG 1 cut(s) 1253
Bbv12I GWGCWC 4 cut(s) 508, 536, 1370, 1748
BbvI GCAGC 2 cut(s) 26, 495
BccI CCATC 5 cut(s) 863, 926, 1021, 1327, 1444
BceAI ACGGC 2 cut(s) 158, 1170
BcgI CGANNNNNNTGC 4 cut(s) 671, 705, 1144, 1178
BciT130I CCWGG 2 cut(s) 92, 1362
BclI TGATCA 2 cut(s) 9, 1173
BcnI CCSGG 1 cut(s) 1605
BfaI CTAG 5 cut(s) 591, 695, 1323, 1382, 1517
BfrI CTTAAG 2 cut(s) 362, 1202
BisI GCNGC 3 cut(s) 40, 150, 484
BlpI GCTNAGC 1 cut(s) 43
BlsI GCNGC 3 cut(s) 41, 151, 485
Bme1390I CCNGG 3 cut(s) 92, 1362, 1605
Bme18I GGWCC 1 cut(s) 1708
BmgBI CACGTC 1 cut(s) 1103
BmgT120I GGNCC 2 cut(s) 112, 1708
BmiI GGNNCC 2 cut(s) 942, 1709
BmrFI CCNGG 3 cut(s) 92, 1362, 1605
BmrI ACTGGG 1 cut(s) 119
BmsI GCATC 5 cut(s) 220, 609, 1061, 1227, 1534
BmuI ACTGGG 1 cut(s) 119
BpmI CTGGAG 2 cut(s) 38, 396
Bpu1102I GCTNAGC 1 cut(s) 43
Bpu14I TTCGAA 1 cut(s) 74
BpuMI CCSGG 1 cut(s) 1605
BsaHI GRCGYC 1 cut(s) 66
BsaJI CCNNGG 4 cut(s) 129, 462, 1360, 1361
BsaWI WCCGGW 3 cut(s) 117, 453, 989
BsaXI ACNNNNNCTCC 6 cut(s) 99, 129, 817, 847, 921, 951
Bse1I ACTGG 2 cut(s) 114, 273
Bse3DI GCAATG 2 cut(s) 885, 1575
BseAI TCCGGA 3 cut(s) 117, 453, 989
BseBI CCWGG 2 cut(s) 92, 1362
BseDI CCNNGG 4 cut(s) 129, 462, 1360, 1361
BseGI GGATG 6 cut(s) 649, 834, 952, 1076, 1353, 1462
BseMI GCAATG 2 cut(s) 885, 1575
BseNI ACTGG 2 cut(s) 114, 273
BseRI GAGGAG 1 cut(s) 911
BseSI GKGCMC 1 cut(s) 508
BseXI GCAGC 2 cut(s) 26, 495
Bsh1236I CGCG 5 cut(s) 281, 557, 599, 767, 891
BshFI GGCC 3 cut(s) 114, 640, 1574
BsiHKAI GWGCWC 4 cut(s) 508, 536, 1370, 1748
BsiSI CCGG 7 cut(s) 118, 206, 454, 641, 944, 990, 1604
BslFI GGGAC 2 cut(s) 398, 1721
BsmFI GGGAC 2 cut(s) 398, 1721
BsnI GGCC 3 cut(s) 114, 640, 1574
Bsp119I TTCGAA 1 cut(s) 74
Bsp1286I GDGCHC 4 cut(s) 508, 536, 1370, 1748
Bsp13I TCCGGA 3 cut(s) 117, 453, 989
Bsp143I GATC 3 cut(s) 9, 1173, 1356
Bsp1720I GCTNAGC 1 cut(s) 43
Bsp19I CCATGG 1 cut(s) 462
BspACI CCGC 7 cut(s) 150, 156, 486, 599, 891, 1409, 1636
BspANI GGCC 3 cut(s) 114, 640, 1574
BspEI TCCGGA 3 cut(s) 117, 453, 989
BspFNI CGCG 5 cut(s) 281, 557, 599, 767, 891
BspLI GGNNCC 2 cut(s) 942, 1709
BspPI GGATC 1 cut(s) 1351
BspT104I TTCGAA 1 cut(s) 74
BspTI CTTAAG 2 cut(s) 362, 1202
BsrDI GCAATG 2 cut(s) 885, 1575
BsrI ACTGG 2 cut(s) 114, 273
BssECI CCNNGG 4 cut(s) 129, 462, 1360, 1361
BssMI GATC 3 cut(s) 9, 1173, 1356
BssNI GRCGYC 1 cut(s) 66
BssSI CACGAG 1 cut(s) 1253
BssT1I CCWWGG 2 cut(s) 129, 462
Bst2BI CACGAG 1 cut(s) 1253
Bst2UI CCWGG 2 cut(s) 92, 1362
Bst4CI ACNGT 1 cut(s) 1431
Bst6I CTCTTC 4 cut(s) 245, 740, 1004, 1472
BstACI GRCGYC 1 cut(s) 66
BstAFI CTTAAG 2 cut(s) 362, 1202
BstBI TTCGAA 1 cut(s) 74
BstC8I GCNNGC 2 cut(s) 1183, 1486
BstDEI CTNAG 4 cut(s) 43, 1053, 1665, 1677
BstDSI CCRYGG 1 cut(s) 462
BstF5I GGATG 6 cut(s) 649, 834, 952, 1076, 1353, 1462
BstFNI CGCG 5 cut(s) 281, 557, 599, 767, 891
BstHHI GCGC 5 cut(s) 557, 694, 769, 891, 1192
BstKTI GATC 3 cut(s) 12, 1176, 1359
BstMBI GATC 3 cut(s) 9, 1173, 1356
BstMWI GCNNNNNNNGC 5 cut(s) 155, 554, 1144, 1187, 1198
BstNI CCWGG 2 cut(s) 92, 1362
BstSCI CCNGG 3 cut(s) 90, 1360, 1603
BstSLI GKGCMC 1 cut(s) 508
BstUI CGCG 5 cut(s) 281, 557, 599, 767, 891
BstV1I GCAGC 2 cut(s) 26, 495
BstX2I RGATCY 1 cut(s) 1356
BstYI RGATCY 1 cut(s) 1356
BsuRI GGCC 3 cut(s) 114, 640, 1574
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 2 cut(s) 572, 1346
BtrI CACGTC 1 cut(s) 1103
BtsCI GGATG 6 cut(s) 649, 834, 952, 1076, 1353, 1462
BtsIMutI CAGTG 1 cut(s) 1183
Cac8I GCNNGC 2 cut(s) 1183, 1486
CfoI GCGC 5 cut(s) 557, 694, 769, 891, 1192
Cfr13I GGNCC 2 cut(s) 112, 1708
CseI GACGC 1 cut(s) 605
Csp6I GTAC 3 cut(s) 678, 1015, 1049
CviAII CATG 8 cut(s) 313, 410, 449, 463, 884, 1075, 1193, 1249
CviQI GTAC 3 cut(s) 678, 1015, 1049
DdeI CTNAG 4 cut(s) 43, 1053, 1665, 1677
DpnI GATC 3 cut(s) 11, 1175, 1358
DpnII GATC 3 cut(s) 9, 1173, 1356
DraI TTTAAA 1 cut(s) 1551
EaeI YGGCCR 1 cut(s) 1572
Eam1104I CTCTTC 4 cut(s) 245, 740, 1004, 1472
EarI CTCTTC 4 cut(s) 245, 740, 1004, 1472
Ecl136II GAGCTC 1 cut(s) 534
Eco130I CCWWGG 2 cut(s) 129, 462
Eco24I GRGCYC 1 cut(s) 536
Eco47I GGWCC 1 cut(s) 1708
Eco53kI GAGCTC 1 cut(s) 534
Eco57I CTGAAG 2 cut(s) 101, 1003
EcoICRI GAGCTC 1 cut(s) 534
EcoRII CCWGG 2 cut(s) 90, 1360
EcoT14I CCWWGG 2 cut(s) 129, 462
EcoT22I ATGCAT 2 cut(s) 885, 1076
EcoT38I GRGCYC 1 cut(s) 536
ErhI CCWWGG 2 cut(s) 129, 462
FaeI CATG 8 cut(s) 316, 413, 452, 466, 887, 1078, 1196, 1252
FalI AAGNNNNNCTT 2 cut(s) 1001, 1033
FaqI GGGAC 2 cut(s) 398, 1721
FatI CATG 8 cut(s) 312, 409, 448, 462, 883, 1074, 1192, 1248
FauI CCCGC 3 cut(s) 884, 1402, 1629
FauNDI CATATG 1 cut(s) 471
FbaI TGATCA 2 cut(s) 9, 1173
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 3 cut(s) 40, 150, 484
FokI GGATG 6 cut(s) 656, 841, 959, 1083, 1360, 1469
FriOI GRGCYC 1 cut(s) 536
Fsp4HI GCNGC 3 cut(s) 40, 150, 484
FspAI RTGCGCAY 1 cut(s) 1191
FspBI CTAG 5 cut(s) 591, 695, 1323, 1382, 1517
FspI TGCGCA 1 cut(s) 1191
GlaI GCGC 5 cut(s) 556, 693, 768, 890, 1191
GluI GCNGC 3 cut(s) 40, 150, 484
GsuI CTGGAG 2 cut(s) 38, 396
HaeIII GGCC 3 cut(s) 114, 640, 1574
HapII CCGG 7 cut(s) 118, 206, 454, 641, 944, 990, 1604
HgaI GACGC 1 cut(s) 605
HhaI GCGC 5 cut(s) 557, 694, 769, 891, 1192
Hin1I GRCGYC 1 cut(s) 66
Hin1II CATG 8 cut(s) 316, 413, 452, 466, 887, 1078, 1196, 1252
Hin6I GCGC 5 cut(s) 555, 692, 767, 889, 1190
HinP1I GCGC 5 cut(s) 555, 692, 767, 889, 1190
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HindIII AAGCTT 2 cut(s) 291, 1205
HinfI GANTC 7 cut(s) 209, 327, 539, 716, 739, 1256, 1630
HpaII CCGG 7 cut(s) 118, 206, 454, 641, 944, 990, 1604
HphI GGTGA 6 cut(s) 337, 433, 449, 1213, 1714, 1715
Hpy166II GTNNAC 4 cut(s) 178, 506, 678, 1049
Hpy188I TCNGA 8 cut(s) 163, 214, 257, 538, 744, 1155, 1507, 1593
Hpy188III TCNNGA 6 cut(s) 55, 118, 454, 990, 1691, 1732
Hpy8I GTNNAC 4 cut(s) 178, 506, 678, 1049
Hpy99I CGWCG 4 cut(s) 68, 71, 179, 599
HpyAV CCTTC 3 cut(s) 505, 1591, 1598
HpyCH4III ACNGT 1 cut(s) 1431
HpyCH4IV ACGT 2 cut(s) 66, 1102
HpyCH4V TGCA 8 cut(s) 483, 506, 622, 883, 1074, 1092, 1252, 1289
HpyF10VI GCNNNNNNNGC 5 cut(s) 155, 554, 1144, 1187, 1198
HpyF3I CTNAG 4 cut(s) 43, 1053, 1665, 1677
HpySE526I ACGT 2 cut(s) 66, 1102
Hsp92I GRCGYC 1 cut(s) 66
Hsp92II CATG 8 cut(s) 316, 413, 452, 466, 887, 1078, 1196, 1252
HspAI GCGC 5 cut(s) 555, 692, 767, 889, 1190
Kpn2I TCCGGA 3 cut(s) 117, 453, 989
Ksp22I TGATCA 2 cut(s) 9, 1173
Kzo9I GATC 3 cut(s) 9, 1173, 1356
LmnI GCTCC 6 cut(s) 552, 754, 940, 1198, 1365, 1751
Lsp1109I GCAGC 2 cut(s) 26, 495
LweI GCATC 5 cut(s) 220, 609, 1061, 1227, 1534
MaeI CTAG 5 cut(s) 591, 695, 1323, 1382, 1517
MaeII ACGT 2 cut(s) 66, 1102
MaeIII GTNAC 3 cut(s) 275, 649, 761
MalI GATC 3 cut(s) 11, 1175, 1358
MboI GATC 3 cut(s) 9, 1173, 1356
MboII GAAGA 9 cut(s) 232, 757, 1021, 1321, 1483, 1489, 1541, 1544, 1553
MfeI CAATTG 1 cut(s) 843
MflI RGATCY 1 cut(s) 1356
MhlI GDGCHC 4 cut(s) 508, 536, 1370, 1748
MlsI TGGCCA 1 cut(s) 1574
MluCI AATT 6 cut(s) 341, 391, 843, 1261, 1392, 1400
MluNI TGGCCA 1 cut(s) 1574
MlyI GAGTC 3 cut(s) 336, 725, 1265
MmeI TCCRAC 3 cut(s) 186, 886, 1302
Mox20I TGGCCA 1 cut(s) 1574
Mph1103I ATGCAT 2 cut(s) 885, 1076
MroI TCCGGA 3 cut(s) 117, 453, 989
MscI TGGCCA 1 cut(s) 1574
MseI TTAA 6 cut(s) 318, 363, 1143, 1203, 1232, 1550
Msp20I TGGCCA 1 cut(s) 1574
MspA1I CMGCKG 1 cut(s) 486
MspCI CTTAAG 2 cut(s) 362, 1202
MspI CCGG 7 cut(s) 118, 206, 454, 641, 944, 990, 1604
MspR9I CCNGG 3 cut(s) 92, 1362, 1605
MunI CAATTG 1 cut(s) 843
MvaI CCWGG 2 cut(s) 92, 1362
MvnI CGCG 5 cut(s) 281, 557, 599, 767, 891
MwoI GCNNNNNNNGC 5 cut(s) 155, 554, 1144, 1187, 1198
NciI CCSGG 1 cut(s) 1605
NcoI CCATGG 1 cut(s) 462
NdeI CATATG 1 cut(s) 471
NdeII GATC 3 cut(s) 9, 1173, 1356
NlaIII CATG 8 cut(s) 316, 413, 452, 466, 887, 1078, 1196, 1252
NlaIV GGNNCC 2 cut(s) 942, 1709
NmeAIII GCCGAG 1 cut(s) 555
NmuCI GTSAC 1 cut(s) 275
NsbI TGCGCA 1 cut(s) 1191
NsiI ATGCAT 2 cut(s) 885, 1076
NspV TTCGAA 1 cut(s) 74
PasI CCCWGGG 1 cut(s) 1361
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PfeI GAWTC 4 cut(s) 209, 539, 739, 1630
PkrI GCNGC 3 cut(s) 41, 151, 485
PleI GAGTC 3 cut(s) 335, 724, 1264
PpsI GAGTC 3 cut(s) 335, 724, 1264
PsiI TTATAA 1 cut(s) 1686
Psp124BI GAGCTC 1 cut(s) 536
Psp6I CCWGG 2 cut(s) 90, 1360
PspGI CCWGG 2 cut(s) 90, 1360
PspN4I GGNNCC 2 cut(s) 942, 1709
PspPI GGNCC 2 cut(s) 112, 1708
PsuI RGATCY 1 cut(s) 1356
RsaI GTAC 3 cut(s) 679, 1016, 1050
RsaNI GTAC 3 cut(s) 678, 1015, 1049
SacI GAGCTC 1 cut(s) 536
SalI GTCGAC 1 cut(s) 176
SaqAI TTAA 6 cut(s) 318, 363, 1143, 1203, 1232, 1550
SatI GCNGC 3 cut(s) 40, 150, 484
Sau3AI GATC 3 cut(s) 9, 1173, 1356
Sau96I GGNCC 2 cut(s) 112, 1708
SchI GAGTC 3 cut(s) 336, 725, 1265
ScrFI CCNGG 3 cut(s) 92, 1362, 1605
SduI GDGCHC 4 cut(s) 508, 536, 1370, 1748
SfaNI GCATC 5 cut(s) 220, 609, 1061, 1227, 1534
SfuI TTCGAA 1 cut(s) 74
SinI GGWCC 1 cut(s) 1708
SmlI CTYRAG 2 cut(s) 362, 1202
SmoI CTYRAG 2 cut(s) 362, 1202
Sse9I AATT 6 cut(s) 341, 391, 843, 1261, 1392, 1400
SsiI CCGC 7 cut(s) 150, 156, 486, 599, 891, 1409, 1636
SspMI CTAG 5 cut(s) 591, 695, 1323, 1382, 1517
SstI GAGCTC 1 cut(s) 536
StyD4I CCNGG 3 cut(s) 90, 1360, 1603
StyI CCWWGG 2 cut(s) 129, 462
TaaI ACNGT 1 cut(s) 1431
TaiI ACGT 2 cut(s) 69, 1105
TaqI TCGA 3 cut(s) 74, 177, 1690
TaqII GACCGA 1 cut(s) 1725
TasI AATT 6 cut(s) 341, 391, 843, 1261, 1392, 1400
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 4 cut(s) 209, 539, 739, 1630
Tru1I TTAA 6 cut(s) 318, 363, 1143, 1203, 1232, 1550
Tru9I TTAA 6 cut(s) 318, 363, 1143, 1203, 1232, 1550
TscAI CASTG 1 cut(s) 1183
TseFI GTSAC 1 cut(s) 275
TseI GCWGC 2 cut(s) 39, 483
Tsp45I GTSAC 1 cut(s) 275
TspGWI ACGGA 2 cut(s) 181, 523
TspRI CASTG 1 cut(s) 1183
Vha464I CTTAAG 2 cut(s) 362, 1202
VneI GTGCAC 1 cut(s) 504
VpaK11BI GGWCC 1 cut(s) 1708
XapI RAATTY 4 cut(s) 341, 391, 1392, 1400
XcmI CCANNNNNNNNNTGG 1 cut(s) 1733
XmiI GTMKAC 1 cut(s) 177
XspI CTAG 5 cut(s) 591, 695, 1323, 1382, 1517
ZraI GACGTC 1 cut(s) 67
Zsp2I ATGCAT 2 cut(s) 885, 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.