RchiOBHm_Chr6g0298171

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0006671
Physical Location & Seq
Reverse (-)
59698537 .. 59700374
1838 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26764

Sequence Viewer

Length: 1797 bp
ATGCAATATTTCCAAACCCTGAAAAGAAGCAAGCTCATCATCATTAACACCAGAGAAGCAGAGCAGAGCTGCTTGGCTCTACTCCAACTGTGCGACGTCGTTCCGAAGCTGACGCAAATCCAAGCCCACATTGCCAAATTGGGCCTCCGAAACAACCCCTTAGTGCTCACCAAGTTCGCCTCCACCGCCTCCGACCTCAAGGCCATTGACTACGCCTCTTCCTTCCTGTTCTCGCCGGATTCTGATACCCATTTATACGATGCGTTTCTCTTCAACACCATCATCAGGGCTTACGCTCAGACCGGTCATGCAAAGCATAAAGCTTTGTGCTTTTACAAAGTTATGGTTAAAGGTCAAGTCTTGCCTAATAAATTCACCTACCCTTTTGTTCTCAAGGCCTGTGCCGGCGTCGGGGACTTGAATTTGGGGAAGTCGGTTCATGGGTCGGTGGTGAAATTCGGGTTTGGTGATGATGTCCATGTTCGGAACACCATGGTTCATATGTACTGTAGCTGCGGTGGAGGGATTGAAAGTGCACGGAAGGTGTTCGATGAAATGCCTAACTGGGACTCTGTTTCGTGGAGCGCGATGATTGGAGGGTATGTGAGGGTGGGGTGGTCTAGCGATGCGGTGGAGCTGTTTAGGGAGATGCAGATGGCGGGAGTGAGGCCGGACGAGATTACTATGGTTTCGGTTTTGTCTGCGTGTACCGATTTGGGTGCGCTTGAGCTTGGCAAGTGGGTGGAGTCCTATATTGAGAAAGAGGGGATTCAGAAAAGTGTGGAGCTTTGTAATGCGCTCATTGACATGTTTGCGAAATGTGGCAATGTTGATAAGGCTTTGAAGTTGTTTAGGGGCATGAGCGGGAGGACAATTGTTTCTTGGACTTCTGTGATTGATGGTTTGGCAATGCATGGCCGAGGAGAAGAGGCTGTTTCTTTGTTTGAAGAAATGATTGGAGTCGGGGTGGAACCGGATGATGTTGCATTTATAGGACTGCTTTCGGCTTGCAGTCATTCCGGGTTGGTTGATAAGGGGAAGAGGTACTTCAGTATTATGGTGGAAAAATTTGGACGTGTACCTAAGATAGAACACTATGGATGCATGGTGGATATGTTATGCCGAGCTGGACATGTCAAGGAGGCATTGGAGTTTATTCGGAGAATGCCTATTCAGCTAAATCCGATAATTTTGCGGACCCTAATCAGTGCTTGTCGTGCGCATGGTGAGCTCAAGCTTGGTGAGAGCATCACCAAAGAGTTAATCAGGGCTGAACCTATGCATGAGTCGAACTATGTCCTGCTTTCCAACATCTATGCAAAAATGAACCATTGGGAGAAGAAAACCAAGACTAGAGAGGCGATGGACAAGAAAGGGATGAAAAAGATCCCTGGGAGCACTATGATTGAGCTAGATAATGAAATTTATGAATTTGTGGCAGGAGATAAATCGCATAAACAGTCCAAAGAGATTTATGAAATGGTTGATGAAATGGGGAGGAAGATGAAGAGGGCTGGATATGTTCCCACTACATCAGAGGTTTTGCTAGACATTGATGAAGAAGATAAAGAAGATGCTTTAAATAGGCATAGTGAAAAGTTGGCCATTGCTTTCGCTCTCCTGAACACACCACCAGGAACTCCTATTCGCATGGTAAAGAACTTGCGGGTTTGTGATGATTGCCACTCTGCTACTAAGTTCATCTCTAAGATTTATAATCGAGAAATACTGGTGAGGGACCGAAACAGGTTTCACCATTTCAAGGATGGTCTGTGTTCATGTAGAGATTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

598

Amino Acids

67.26

Weight (kDa)

8.18

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 87 - 135 7.5e-08 PPR repeat family
PPR_2 PF13041 190 - 236 2.5e-09 PPR repeat family
PPR PF01535 192 - 222 1.5e-07 PPR repeat
PPR_2 PF13041 291 - 338 5.3e-10 PPR repeat family
PPR PF01535 293 - 323 3.7e-08 PPR repeat
PPR_1 PF12854 363 - 389 6.7e-06 PPR repeat
E_motif PF20431 408 - 470 9e-14 E motif
Eplus_motif PF20430 475 - 502 1.1e-07 E+ motif
DYW_deaminase PF14432 506 - 598 2.8e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1716
AatII GACGTC 1 cut(s) 99
Acc16I TGCGCA 1 cut(s) 1221
AccBSI CCGCTC 1 cut(s) 864
AccII CGCG 1 cut(s) 587
AciI CCGC 7 cut(s) 186, 516, 629, 659, 864, 1195, 1666
AclWI GGATC 1 cut(s) 1381
AcoI YGGCCR 2 cut(s) 916, 1602
AcsI RAATTY 6 cut(s) 371, 421, 455, 1067, 1422, 1430
AcuI CTGAAG 1 cut(s) 1033
AcyI GRCGYC 2 cut(s) 96, 408
AfaI GTAC 4 cut(s) 506, 709, 1046, 1080
AfiI CCNNNNNNNGG 3 cut(s) 285, 411, 1762
AflIII ACRYGT 3 cut(s) 807, 1075, 1132
AgeI ACCGGT 1 cut(s) 302
AgsI TTSAA 6 cut(s) 274, 421, 530, 844, 947, 1762
AjiI CACGTC 1 cut(s) 1076
AjnI CCWGG 2 cut(s) 1390, 1633
AjuI GAANNNNNNNTTGG 2 cut(s) 939, 971
Alw21I GWGCWC 4 cut(s) 168, 538, 1233, 1400
Alw44I GTGCAC 1 cut(s) 534
AlwI GGATC 1 cut(s) 1381
AoxI GGCC 6 cut(s) 142, 201, 396, 668, 916, 1602
ApaLI GTGCAC 1 cut(s) 534
ApeKI GCWGC 2 cut(s) 69, 513
ApoI RAATTY 6 cut(s) 371, 421, 455, 1067, 1422, 1430
AsiGI ACCGGT 1 cut(s) 302
Asp700I GAANNNNTTC 1 cut(s) 545
AspLEI GCGC 4 cut(s) 587, 724, 799, 1222
AspS9I GGNCC 3 cut(s) 142, 1197, 1738
AsuC2I CCSGG 1 cut(s) 1021
AsuHPI GGTGA 9 cut(s) 160, 367, 463, 479, 1238, 1243, 1253, 1744, 1745
AvaII GGWCC 2 cut(s) 1197, 1738
BaeGI GKGCMC 1 cut(s) 538
BaeI ACNNNNGTAYC 2 cut(s) 1036, 1069
BalI TGGCCA 1 cut(s) 1604
BanII GRGCYC 1 cut(s) 1233
Bbv12I GWGCWC 4 cut(s) 168, 538, 1233, 1400
BbvI GCAGC 2 cut(s) 56, 500
BccI CCATC 5 cut(s) 287, 649, 893, 1357, 1760
BcgI CGANNNNNNTGC 4 cut(s) 701, 735, 1174, 1208
BciT130I CCWGG 2 cut(s) 1392, 1635
BcnI CCSGG 1 cut(s) 1021
BfaI CTAG 4 cut(s) 621, 1353, 1412, 1547
BfmI CTRYAG 1 cut(s) 508
BisI GCNGC 2 cut(s) 70, 514
BlsI GCNGC 2 cut(s) 71, 515
Bme1390I CCNGG 3 cut(s) 1021, 1392, 1635
Bme18I GGWCC 2 cut(s) 1197, 1738
BmgBI CACGTC 1 cut(s) 1076
BmgT120I GGNCC 3 cut(s) 142, 1197, 1738
BmiI GGNNCC 3 cut(s) 972, 1199, 1739
BmrFI CCNGG 3 cut(s) 1021, 1392, 1635
BmrI ACTGGG 1 cut(s) 574
BmsI GCATC 6 cut(s) 250, 616, 639, 1091, 1257, 1564
BmuI ACTGGG 1 cut(s) 574
BpuEI CTTGAG 4 cut(s) 182, 377, 746, 1217
BpuMI CCSGG 1 cut(s) 1021
BsaHI GRCGYC 2 cut(s) 96, 408
BsaJI CCNNGG 4 cut(s) 492, 919, 1390, 1391
BsaWI WCCGGW 2 cut(s) 302, 973
BsaXI ACNNNNNCTCC 4 cut(s) 588, 618, 951, 981
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 411, 1762
Bse118I RCCGGY 2 cut(s) 302, 404
Bse1I ACTGG 2 cut(s) 569, 1734
Bse3DI GCAATG 4 cut(s) 129, 832, 915, 1605
BseBI CCWGG 2 cut(s) 1392, 1635
BseDI CCNNGG 4 cut(s) 492, 919, 1390, 1391
BseGI GGATG 4 cut(s) 982, 1106, 1383, 1771
BseLI CCNNNNNNNGG 3 cut(s) 285, 411, 1762
BseMI GCAATG 4 cut(s) 129, 832, 915, 1605
BseMII CTCAG 1 cut(s) 311
BseNI ACTGG 2 cut(s) 569, 1734
BseRI GAGGAG 1 cut(s) 936
BseSI GKGCMC 1 cut(s) 538
BseXI GCAGC 2 cut(s) 56, 500
Bsh1236I CGCG 1 cut(s) 587
BshFI GGCC 6 cut(s) 144, 203, 398, 670, 918, 1604
BshTI ACCGGT 1 cut(s) 302
BsiHKAI GWGCWC 4 cut(s) 168, 538, 1233, 1400
BsiSI CCGG 6 cut(s) 236, 303, 405, 671, 974, 1020
BslFI GGGAC 3 cut(s) 428, 581, 1751
BslI CCNNNNNNNGG 3 cut(s) 285, 411, 1762
BsmFI GGGAC 3 cut(s) 428, 581, 1751
BsmI GAATGC 1 cut(s) 1170
BsnI GGCC 6 cut(s) 144, 203, 398, 670, 918, 1604
Bsp1286I GDGCHC 4 cut(s) 168, 538, 1233, 1400
Bsp143I GATC 1 cut(s) 1386
Bsp19I CCATGG 1 cut(s) 492
BspACI CCGC 7 cut(s) 186, 516, 629, 659, 864, 1195, 1666
BspANI GGCC 6 cut(s) 144, 203, 398, 670, 918, 1604
BspCNI CTCAG 1 cut(s) 310
BspFNI CGCG 1 cut(s) 587
BspLI GGNNCC 3 cut(s) 972, 1199, 1739
BspPI GGATC 1 cut(s) 1381
BsrBI CCGCTC 1 cut(s) 864
BsrDI GCAATG 4 cut(s) 129, 832, 915, 1605
BsrFI RCCGGY 2 cut(s) 302, 404
BsrI ACTGG 2 cut(s) 569, 1734
BssAI RCCGGY 2 cut(s) 302, 404
BssECI CCNNGG 4 cut(s) 492, 919, 1390, 1391
BssMI GATC 1 cut(s) 1386
BssNI GRCGYC 2 cut(s) 96, 408
BssT1I CCWWGG 1 cut(s) 492
Bst2UI CCWGG 2 cut(s) 1392, 1635
Bst4CI ACNGT 3 cut(s) 90, 509, 1461
Bst6I CTCTTC 5 cut(s) 223, 275, 921, 1034, 1502
BstACI GRCGYC 2 cut(s) 96, 408
BstC8I GCNNGC 3 cut(s) 32, 406, 1009
BstDEI CTNAG 5 cut(s) 160, 297, 1083, 1695, 1707
BstDSI CCRYGG 1 cut(s) 492
BstF5I GGATG 4 cut(s) 982, 1106, 1383, 1771
BstFNI CGCG 1 cut(s) 587
BstHHI GCGC 4 cut(s) 587, 724, 799, 1222
BstKTI GATC 1 cut(s) 1389
BstMBI GATC 1 cut(s) 1386
BstMWI GCNNNNNNNGC 5 cut(s) 131, 185, 1174, 1217, 1228
BstNI CCWGG 2 cut(s) 1392, 1635
BstNSI RCATGY 2 cut(s) 811, 1136
BstSCI CCNGG 3 cut(s) 1019, 1390, 1633
BstSFI CTRYAG 1 cut(s) 508
BstSLI GKGCMC 1 cut(s) 538
BstUI CGCG 1 cut(s) 587
BstV1I GCAGC 2 cut(s) 56, 500
BstX2I RGATCY 1 cut(s) 1386
BstYI RGATCY 1 cut(s) 1386
BsuRI GGCC 6 cut(s) 144, 203, 398, 670, 918, 1604
BtgI CCRYGG 1 cut(s) 492
BtgZI GCGATG 3 cut(s) 602, 639, 1376
BtrI CACGTC 1 cut(s) 1076
BtsCI GGATG 4 cut(s) 982, 1106, 1383, 1771
BtsIMutI CAGTG 1 cut(s) 1213
Cac8I GCNNGC 3 cut(s) 32, 406, 1009
CfoI GCGC 4 cut(s) 587, 724, 799, 1222
Cfr10I RCCGGY 2 cut(s) 302, 404
Cfr13I GGNCC 3 cut(s) 142, 1197, 1738
CseI GACGC 2 cut(s) 121, 397
Csp6I GTAC 4 cut(s) 505, 708, 1045, 1079
CspAI ACCGGT 1 cut(s) 302
CviQI GTAC 4 cut(s) 505, 708, 1045, 1079
DdeI CTNAG 5 cut(s) 160, 297, 1083, 1695, 1707
DpnI GATC 1 cut(s) 1388
DpnII GATC 1 cut(s) 1386
DraI TTTAAA 1 cut(s) 1581
EaeI YGGCCR 2 cut(s) 916, 1602
Eam1104I CTCTTC 5 cut(s) 223, 275, 921, 1034, 1502
EarI CTCTTC 5 cut(s) 223, 275, 921, 1034, 1502
Ecl136II GAGCTC 1 cut(s) 1231
Eco130I CCWWGG 1 cut(s) 492
Eco147I AGGCCT 1 cut(s) 398
Eco24I GRGCYC 1 cut(s) 1233
Eco47I GGWCC 2 cut(s) 1197, 1738
Eco53kI GAGCTC 1 cut(s) 1231
Eco57I CTGAAG 1 cut(s) 1033
EcoICRI GAGCTC 1 cut(s) 1231
EcoRII CCWGG 2 cut(s) 1390, 1633
EcoT14I CCWWGG 1 cut(s) 492
EcoT22I ATGCAT 3 cut(s) 915, 1106, 1284
EcoT38I GRGCYC 1 cut(s) 1233
ErhI CCWWGG 1 cut(s) 492
FalI AAGNNNNNCTT 2 cut(s) 1031, 1063
FaqI GGGAC 3 cut(s) 428, 581, 1751
FauI CCCGC 3 cut(s) 652, 857, 1659
FauNDI CATATG 1 cut(s) 501
Fnu4HI GCNGC 2 cut(s) 70, 514
FokI GGATG 4 cut(s) 989, 1113, 1390, 1778
FriOI GRGCYC 1 cut(s) 1233
Fsp4HI GCNGC 2 cut(s) 70, 514
FspAI RTGCGCAY 1 cut(s) 1221
FspBI CTAG 4 cut(s) 621, 1353, 1412, 1547
FspI TGCGCA 1 cut(s) 1221
GlaI GCGC 4 cut(s) 586, 723, 798, 1221
GluI GCNGC 2 cut(s) 70, 514
HaeIII GGCC 6 cut(s) 144, 203, 398, 670, 918, 1604
HapII CCGG 6 cut(s) 236, 303, 405, 671, 974, 1020
HgaI GACGC 2 cut(s) 121, 397
HhaI GCGC 4 cut(s) 587, 724, 799, 1222
Hin1I GRCGYC 2 cut(s) 96, 408
Hin6I GCGC 4 cut(s) 585, 722, 797, 1220
HinP1I GCGC 4 cut(s) 585, 722, 797, 1220
HindIII AAGCTT 2 cut(s) 321, 1235
HinfI GANTC 6 cut(s) 239, 569, 746, 769, 960, 1286
HpaII CCGG 6 cut(s) 236, 303, 405, 671, 974, 1020
HphI GGTGA 9 cut(s) 160, 367, 463, 479, 1238, 1243, 1253, 1744, 1745
Hpy166II GTNNAC 3 cut(s) 536, 708, 1079
Hpy188III TCNNGA 2 cut(s) 1621, 1721
Hpy8I GTNNAC 3 cut(s) 536, 708, 1079
Hpy99I CGWCG 3 cut(s) 98, 101, 413
HpyAV CCTTC 2 cut(s) 232, 535
HpyCH4III ACNGT 3 cut(s) 90, 509, 1461
HpyCH4IV ACGT 2 cut(s) 96, 1075
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 185, 1174, 1217, 1228
HpyF3I CTNAG 5 cut(s) 160, 297, 1083, 1695, 1707
HpySE526I ACGT 2 cut(s) 96, 1075
Hsp92I GRCGYC 2 cut(s) 96, 408
HspAI GCGC 4 cut(s) 585, 722, 797, 1220
KroI GCCGGC 1 cut(s) 404
KroNI GCCGGC 1 cut(s) 406
Kzo9I GATC 1 cut(s) 1386
LmnI GCTCC 4 cut(s) 582, 634, 784, 1395
Lsp1109I GCAGC 2 cut(s) 56, 500
LweI GCATC 6 cut(s) 250, 616, 639, 1091, 1257, 1564
MaeI CTAG 4 cut(s) 621, 1353, 1412, 1547
MaeII ACGT 2 cut(s) 96, 1075
MalI GATC 1 cut(s) 1388
MbiI CCGCTC 1 cut(s) 864
MboI GATC 1 cut(s) 1386
MfeI CAATTG 1 cut(s) 873
MflI RGATCY 1 cut(s) 1386
MhlI GDGCHC 4 cut(s) 168, 538, 1233, 1400
MlsI TGGCCA 1 cut(s) 1604
MluCI AATT 9 cut(s) 137, 371, 421, 455, 873, 1067, 1188, 1422, 1430
MluNI TGGCCA 1 cut(s) 1604
MlyI GAGTC 4 cut(s) 563, 755, 969, 1295
MmeI TCCRAC 3 cut(s) 109, 216, 1332
Mox20I TGGCCA 1 cut(s) 1604
Mph1103I ATGCAT 3 cut(s) 915, 1106, 1284
MroNI GCCGGC 1 cut(s) 404
MroXI GAANNNNTTC 1 cut(s) 545
MscI TGGCCA 1 cut(s) 1604
MseI TTAA 4 cut(s) 45, 348, 1262, 1580
MslI CAYNNNNRTG 1 cut(s) 806
Msp20I TGGCCA 1 cut(s) 1604
MspI CCGG 6 cut(s) 236, 303, 405, 671, 974, 1020
MspR9I CCNGG 3 cut(s) 1021, 1392, 1635
MunI CAATTG 1 cut(s) 873
Mva1269I GAATGC 1 cut(s) 1170
MvaI CCWGG 2 cut(s) 1392, 1635
MvnI CGCG 1 cut(s) 587
MwoI GCNNNNNNNGC 5 cut(s) 131, 185, 1174, 1217, 1228
NaeI GCCGGC 1 cut(s) 406
NciI CCSGG 1 cut(s) 1021
NcoI CCATGG 1 cut(s) 492
NdeI CATATG 1 cut(s) 501
NdeII GATC 1 cut(s) 1386
NgoMIV GCCGGC 1 cut(s) 404
NlaIV GGNNCC 3 cut(s) 972, 1199, 1739
NmeAIII GCCGAG 2 cut(s) 944, 1148
NsbI TGCGCA 1 cut(s) 1221
NsiI ATGCAT 3 cut(s) 915, 1106, 1284
NspI RCATGY 2 cut(s) 811, 1136
PasI CCCWGGG 1 cut(s) 1391
PceI AGGCCT 1 cut(s) 398
PciI ACATGT 2 cut(s) 807, 1132
PcsI WCGNNNNNNNCGW 1 cut(s) 584
PctI GAATGC 1 cut(s) 1170
PdiI GCCGGC 1 cut(s) 406
PdmI GAANNNNTTC 1 cut(s) 545
PfeI GAWTC 2 cut(s) 239, 769
PinAI ACCGGT 1 cut(s) 302
PkrI GCNGC 2 cut(s) 71, 515
PleI GAGTC 4 cut(s) 563, 754, 968, 1294
PpsI GAGTC 4 cut(s) 563, 754, 968, 1294
PscI ACATGT 2 cut(s) 807, 1132
PsiI TTATAA 1 cut(s) 1716
Psp124BI GAGCTC 1 cut(s) 1233
Psp6I CCWGG 2 cut(s) 1390, 1633
PspGI CCWGG 2 cut(s) 1390, 1633
PspN4I GGNNCC 3 cut(s) 972, 1199, 1739
PspPI GGNCC 3 cut(s) 142, 1197, 1738
PsuI RGATCY 1 cut(s) 1386
RsaI GTAC 4 cut(s) 506, 709, 1046, 1080
RsaNI GTAC 4 cut(s) 505, 708, 1045, 1079
RseI CAYNNNNRTG 1 cut(s) 806
SacI GAGCTC 1 cut(s) 1233
SaqAI TTAA 4 cut(s) 45, 348, 1262, 1580
SatI GCNGC 2 cut(s) 70, 514
Sau3AI GATC 1 cut(s) 1386
Sau96I GGNCC 3 cut(s) 142, 1197, 1738
SchI GAGTC 4 cut(s) 563, 755, 969, 1295
ScrFI CCNGG 3 cut(s) 1021, 1392, 1635
SduI GDGCHC 4 cut(s) 168, 538, 1233, 1400
SfaNI GCATC 6 cut(s) 250, 616, 639, 1091, 1257, 1564
SfcI CTRYAG 1 cut(s) 508
SinI GGWCC 2 cut(s) 1197, 1738
SmiMI CAYNNNNRTG 1 cut(s) 806
SmlI CTYRAG 4 cut(s) 197, 392, 725, 1232
SmoI CTYRAG 4 cut(s) 197, 392, 725, 1232
Sse9I AATT 9 cut(s) 137, 371, 421, 455, 873, 1067, 1188, 1422, 1430
SseBI AGGCCT 1 cut(s) 398
SsiI CCGC 7 cut(s) 186, 516, 629, 659, 864, 1195, 1666
SspI AATATT 1 cut(s) 8
SspMI CTAG 4 cut(s) 621, 1353, 1412, 1547
SstI GAGCTC 1 cut(s) 1233
StuI AGGCCT 1 cut(s) 398
StyD4I CCNGG 3 cut(s) 1019, 1390, 1633
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 3 cut(s) 90, 509, 1461
TaiI ACGT 2 cut(s) 99, 1078
TaqI TCGA 3 cut(s) 549, 1289, 1720
TaqII GACCGA 1 cut(s) 1755
TasI AATT 9 cut(s) 137, 371, 421, 455, 873, 1067, 1188, 1422, 1430
TatI WGTACW 1 cut(s) 504
TfiI GAWTC 2 cut(s) 239, 769
Tru1I TTAA 4 cut(s) 45, 348, 1262, 1580
Tru9I TTAA 4 cut(s) 45, 348, 1262, 1580
TscAI CASTG 1 cut(s) 1213
TseI GCWGC 2 cut(s) 69, 513
TspGWI ACGGA 1 cut(s) 553
TspRI CASTG 1 cut(s) 1213
VneI GTGCAC 1 cut(s) 534
VpaK11BI GGWCC 2 cut(s) 1197, 1738
XapI RAATTY 6 cut(s) 371, 421, 455, 1067, 1422, 1430
XceI RCATGY 2 cut(s) 811, 1136
XcmI CCANNNNNNNNNTGG 1 cut(s) 1763
XmnI GAANNNNTTC 1 cut(s) 545
XspI CTAG 4 cut(s) 621, 1353, 1412, 1547
ZraI GACGTC 1 cut(s) 97
Zsp2I ATGCAT 3 cut(s) 915, 1106, 1284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.