Rw6G034000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0006671
Physical Location & Seq
Reverse (-)
58556650 .. 58558443
1794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G034000.1

Sequence Viewer

Length: 1794 bp
ATGCAATATTTCCAAACCCTGAAAAGAAGCAAGCTCATCATTAACACCAGAGAAGCAGAGCAGAGCTGCTTGGCTCTACTCCAACTGTGCGACGTCGTTCCGAAGCTGACCCAGATCCAAGCCCACATTGTCAAATTGGGCCTCCGAAACAACCCCTTAGTGCTCACCAAGTTCGCCTCCACCGCCTCCGACCTCAAGGCCATTGACCGCGCCTCTTCCTTCCTGTTCTCGCCGGATTCCGATACCCATTTATACGATGCGTTTCTCTTCAACACCGTCATCAGGGCTTACGCTCAGACCGGTCATGCAAAGCATAAAGCTTTGTGCTTTTACAGAGTTATGGTTAAAGGTGAAGTCTTGCCTAATAAATTCACCTACCCTTTTGTTCTCAAGGCCTGTGCCGGCGTCGGGGACTTGAATTTTGGGAAGTCGGTTCATGGGTCGGTGGTGAAATTCGGGTTTGGTGATGATGTCCATGTTCGGAACACCATGGTTCATATGTATTGTTGCTGCGGTGGAGGGATTGAAAGTGCACGGAAGGTGTTTGATGAAATGCCTAACTGGGACTCTGTTTCGTGGAGCGCGATGATCGGAGGGTATGTGAGGGTGGGGTGGTCTAGTGATGCGGTGGAGTTGTTTAGGGAGATGCAGATGGCGGGAGTGAGGCCGGACGAGATTACTATGGTTTCGGTTTTGTCTGCGTGTACCGATTTGGGTGCGCTTGAGCTTGGCAAGTGGGTGGAGTCCTATATTGAGAAAAAGGGGATTCAGAAAAGTGTGGAGCTTTGTAATGCGCTCATTGACATGTTTGCGAAATGTGGCAATGTTGATAAGGCTTTGAAGTTGTTTAGGAACATGAGCGGGAGAACAATTGTTTCTTGGACTTCTGTGATTGATGGTTTGGCAATGCATGGCCGCGGAGAAGAGGCTGTTTCTTTGTTTGAGGAAATGATTGGAGTCGGGGTGGAACCGGATGATGTTGCGTTTATAGGACTGCTTTCGGCTTGTAGTCATTCCGGGTTGGTCGATAAGGGAAAGAGGTACTTCAGTTCAATGATGGAAAAATTTGGACGTGTACCTAAGATCGAACACTATGGGTGCATGGTGGATATGTTATGCCGAGCTGGACATGTCAAGGAGGCATTGGAGTTTATTCGGAAAATGCCTATTCAGCCAAATCCAATAGTTTTGCGAACCCTGATCAGTGCTTGCCGTGCGCATGGCGAGCTCAAGCTTGGAGAGAGCATCACCAAGGAGTTAATCAGGGCTGAACCTATGCATGAGTCGAACTATGTCCTGCTTTCCAACATCTATGCAAAAATGAACCATTGGGAGAAGAAAACCAAGACTAGAGAGGCGATGGACAAGAAAGGGATGAAAAAGATCCCTGGGAGCACTATGATTGAGCTAGATAATCAAATTTACGAATTTGTGGCAGGGGATAAATCGCATAAACAGTCCAAAGAGATTTATGAAATGGTTGATGAAATGGGGAGGAAGATGAAGAGGGCTGGATATGTTCCCACTACATCAGAGGTTTTGCTAGACATTGATGAAGAAGATAAAGAAGATGCTTTAAATAGGCATAGTGAAAAGTTGGCCATTGCTTTCGCCCTCCTGAACACGCCACCAGGAACTCCTATTCGCATAGTAAAGAATCTGCGGGTTTGTGATGATTGCCACTCTGCTACTAAGTACATCTCTAAGATTTATAATCGAGAAATAGTGGTGAGGGACCGAAACAGGTTTCACCATTTCAAGGGTGGTCTGTGTTCTTGTGGAGATTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

597

Amino Acids

67.06

Weight (kDa)

8.48

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 134 2.8e-07 PPR repeat family
PPR_2 PF13041 189 - 235 2.5e-09 PPR repeat family
PPR PF01535 191 - 221 1.5e-07 PPR repeat
PPR_2 PF13041 290 - 337 5.3e-10 PPR repeat family
PPR PF01535 292 - 322 3.7e-08 PPR repeat
PPR_1 PF12854 362 - 388 3.5e-06 PPR repeat
E_motif PF20431 407 - 469 9e-14 E motif
Eplus_motif PF20430 474 - 501 1.1e-07 E+ motif
DYW_deaminase PF14432 505 - 597 2.3e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1713
AatII GACGTC 1 cut(s) 96
Acc16I TGCGCA 1 cut(s) 1218
AccBSI CCGCTC 1 cut(s) 861
AccII CGCG 3 cut(s) 210, 584, 918
AciI CCGC 9 cut(s) 183, 208, 513, 626, 656, 861, 916, 918, 1663
AclWI GGATC 2 cut(s) 109, 1378
AcoI YGGCCR 2 cut(s) 913, 1599
AcsI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
AcuI CTGAAG 1 cut(s) 1030
AcyI GRCGYC 2 cut(s) 93, 405
AfaI GTAC 4 cut(s) 706, 1043, 1077, 1697
AfiI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
AflIII ACRYGT 3 cut(s) 804, 1072, 1129
AgeI ACCGGT 1 cut(s) 299
AgsI TTSAA 6 cut(s) 271, 418, 527, 841, 1053, 1759
AjiI CACGTC 1 cut(s) 1073
AjnI CCWGG 2 cut(s) 1387, 1630
Alw21I GWGCWC 4 cut(s) 165, 535, 1230, 1397
Alw44I GTGCAC 1 cut(s) 531
AlwI GGATC 2 cut(s) 109, 1378
AoxI GGCC 6 cut(s) 139, 198, 393, 665, 913, 1599
ApaLI GTGCAC 1 cut(s) 531
ApeKI GCWGC 2 cut(s) 66, 510
ApoI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AsiGI ACCGGT 1 cut(s) 299
AspLEI GCGC 5 cut(s) 212, 584, 721, 796, 1219
AspS9I GGNCC 2 cut(s) 139, 1735
AsuC2I CCSGG 1 cut(s) 1018
AsuHPI GGTGA 8 cut(s) 157, 362, 364, 460, 476, 1240, 1741, 1742
AvaII GGWCC 1 cut(s) 1735
BaeGI GKGCMC 1 cut(s) 535
BaeI ACNNNNGTAYC 2 cut(s) 1033, 1066
BalI TGGCCA 1 cut(s) 1601
BanII GRGCYC 1 cut(s) 1230
Bbv12I GWGCWC 4 cut(s) 165, 535, 1230, 1397
BbvI GCAGC 2 cut(s) 53, 497
BccI CCATC 4 cut(s) 646, 890, 1051, 1354
BceAI ACGGC 1 cut(s) 1197
BcgI CGANNNNNNTGC 2 cut(s) 698, 732
BciT130I CCWGG 2 cut(s) 1389, 1632
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 1 cut(s) 1018
BfaI CTAG 4 cut(s) 618, 1350, 1409, 1544
BisI GCNGC 3 cut(s) 67, 511, 916
BlsI GCNGC 3 cut(s) 68, 512, 917
Bme1390I CCNGG 3 cut(s) 1018, 1389, 1632
Bme18I GGWCC 1 cut(s) 1735
BmgBI CACGTC 1 cut(s) 1073
BmgT120I GGNCC 2 cut(s) 139, 1735
BmiI GGNNCC 2 cut(s) 969, 1736
BmrFI CCNGG 3 cut(s) 1018, 1389, 1632
BmrI ACTGGG 1 cut(s) 571
BmsI GCATC 5 cut(s) 247, 613, 636, 1254, 1561
BmuI ACTGGG 1 cut(s) 571
BpuEI CTTGAG 4 cut(s) 179, 374, 743, 1214
BpuMI CCSGG 1 cut(s) 1018
BsaHI GRCGYC 2 cut(s) 93, 405
BsaJI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BsaWI WCCGGW 2 cut(s) 299, 970
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 948, 978
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 408, 1759
Bse118I RCCGGY 2 cut(s) 299, 401
Bse1I ACTGG 1 cut(s) 566
Bse3DI GCAATG 3 cut(s) 829, 912, 1602
BseBI CCWGG 2 cut(s) 1389, 1632
BseDI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BseGI GGATG 2 cut(s) 979, 1380
BseLI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
BseMI GCAATG 3 cut(s) 829, 912, 1602
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 1 cut(s) 566
BseSI GKGCMC 1 cut(s) 535
BseXI GCAGC 2 cut(s) 53, 497
Bsh1236I CGCG 3 cut(s) 210, 584, 918
BshFI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BshTI ACCGGT 1 cut(s) 299
BsiHKAI GWGCWC 4 cut(s) 165, 535, 1230, 1397
BsiSI CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
BslFI GGGAC 3 cut(s) 425, 578, 1748
BslI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
BsmFI GGGAC 3 cut(s) 425, 578, 1748
BsnI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
Bsp1286I GDGCHC 4 cut(s) 165, 535, 1230, 1397
Bsp143I GATC 5 cut(s) 114, 588, 1083, 1200, 1383
Bsp19I CCATGG 1 cut(s) 489
BspACI CCGC 9 cut(s) 183, 208, 513, 626, 656, 861, 916, 918, 1663
BspANI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BspCNI CTCAG 1 cut(s) 307
BspFNI CGCG 3 cut(s) 210, 584, 918
BspLI GGNNCC 2 cut(s) 969, 1736
BspPI GGATC 2 cut(s) 109, 1378
BsrBI CCGCTC 1 cut(s) 861
BsrDI GCAATG 3 cut(s) 829, 912, 1602
BsrFI RCCGGY 2 cut(s) 299, 401
BsrI ACTGG 1 cut(s) 566
BssAI RCCGGY 2 cut(s) 299, 401
BssECI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BssMI GATC 5 cut(s) 114, 588, 1083, 1200, 1383
BssNI GRCGYC 2 cut(s) 93, 405
BssT1I CCWWGG 2 cut(s) 489, 1251
Bst2UI CCWGG 2 cut(s) 1389, 1632
Bst4CI ACNGT 3 cut(s) 87, 277, 1458
Bst6I CTCTTC 4 cut(s) 220, 272, 918, 1499
BstACI GRCGYC 2 cut(s) 93, 405
BstC8I GCNNGC 4 cut(s) 32, 403, 1210, 1226
BstDEI CTNAG 5 cut(s) 157, 294, 1080, 1692, 1704
BstDSI CCRYGG 2 cut(s) 489, 916
BstF5I GGATG 2 cut(s) 979, 1380
BstFNI CGCG 3 cut(s) 210, 584, 918
BstHHI GCGC 5 cut(s) 212, 584, 721, 796, 1219
BstKTI GATC 5 cut(s) 117, 591, 1086, 1203, 1386
BstMBI GATC 5 cut(s) 114, 588, 1083, 1200, 1383
BstMWI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
BstNI CCWGG 2 cut(s) 1389, 1632
BstNSI RCATGY 2 cut(s) 808, 1133
BstSCI CCNGG 3 cut(s) 1016, 1387, 1630
BstSLI GKGCMC 1 cut(s) 535
BstUI CGCG 3 cut(s) 210, 584, 918
BstV1I GCAGC 2 cut(s) 53, 497
BstX2I RGATCY 2 cut(s) 114, 1383
BstYI RGATCY 2 cut(s) 114, 1383
BsuRI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BtgI CCRYGG 2 cut(s) 489, 916
BtgZI GCGATG 2 cut(s) 599, 1373
BtrI CACGTC 1 cut(s) 1073
BtsCI GGATG 2 cut(s) 979, 1380
BtsIMutI CAGTG 1 cut(s) 1210
Cac8I GCNNGC 4 cut(s) 32, 403, 1210, 1226
CfoI GCGC 5 cut(s) 212, 584, 721, 796, 1219
Cfr10I RCCGGY 2 cut(s) 299, 401
Cfr13I GGNCC 2 cut(s) 139, 1735
Cfr42I CCGCGG 1 cut(s) 919
CseI GACGC 1 cut(s) 394
Csp6I GTAC 4 cut(s) 705, 1042, 1076, 1696
CspAI ACCGGT 1 cut(s) 299
CviQI GTAC 4 cut(s) 705, 1042, 1076, 1696
DdeI CTNAG 5 cut(s) 157, 294, 1080, 1692, 1704
DpnI GATC 5 cut(s) 116, 590, 1085, 1202, 1385
DpnII GATC 5 cut(s) 114, 588, 1083, 1200, 1383
DraI TTTAAA 1 cut(s) 1578
EaeI YGGCCR 2 cut(s) 913, 1599
Eam1104I CTCTTC 4 cut(s) 220, 272, 918, 1499
EarI CTCTTC 4 cut(s) 220, 272, 918, 1499
Ecl136II GAGCTC 1 cut(s) 1228
Eco130I CCWWGG 2 cut(s) 489, 1251
Eco147I AGGCCT 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 1230
Eco47I GGWCC 1 cut(s) 1735
Eco53kI GAGCTC 1 cut(s) 1228
Eco57I CTGAAG 1 cut(s) 1030
EcoICRI GAGCTC 1 cut(s) 1228
EcoRII CCWGG 2 cut(s) 1387, 1630
EcoT14I CCWWGG 2 cut(s) 489, 1251
EcoT22I ATGCAT 2 cut(s) 912, 1281
EcoT38I GRGCYC 1 cut(s) 1230
ErhI CCWWGG 2 cut(s) 489, 1251
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FaqI GGGAC 3 cut(s) 425, 578, 1748
FauI CCCGC 3 cut(s) 649, 854, 1656
FauNDI CATATG 1 cut(s) 498
FbaI TGATCA 1 cut(s) 1200
Fnu4HI GCNGC 3 cut(s) 67, 511, 916
FokI GGATG 2 cut(s) 986, 1387
FriOI GRGCYC 1 cut(s) 1230
Fsp4HI GCNGC 3 cut(s) 67, 511, 916
FspAI RTGCGCAY 1 cut(s) 1218
FspBI CTAG 4 cut(s) 618, 1350, 1409, 1544
FspI TGCGCA 1 cut(s) 1218
GlaI GCGC 5 cut(s) 211, 583, 720, 795, 1218
GluI GCNGC 3 cut(s) 67, 511, 916
HaeIII GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
HapII CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
HgaI GACGC 1 cut(s) 394
HhaI GCGC 5 cut(s) 212, 584, 721, 796, 1219
Hin1I GRCGYC 2 cut(s) 93, 405
Hin6I GCGC 5 cut(s) 210, 582, 719, 794, 1217
HinP1I GCGC 5 cut(s) 210, 582, 719, 794, 1217
HindIII AAGCTT 2 cut(s) 318, 1232
HinfI GANTC 7 cut(s) 236, 566, 743, 766, 957, 1283, 1657
HpaII CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
HphI GGTGA 8 cut(s) 157, 362, 364, 460, 476, 1240, 1741, 1742
Hpy166II GTNNAC 3 cut(s) 533, 705, 1076
Hpy188III TCNNGA 2 cut(s) 1618, 1718
Hpy8I GTNNAC 3 cut(s) 533, 705, 1076
Hpy99I CGWCG 3 cut(s) 95, 98, 410
HpyAV CCTTC 2 cut(s) 229, 532
HpyCH4III ACNGT 3 cut(s) 87, 277, 1458
HpyCH4IV ACGT 2 cut(s) 93, 1072
HpyCH4V TGCA 8 cut(s) 4, 308, 533, 649, 910, 1101, 1279, 1316
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
HpyF3I CTNAG 5 cut(s) 157, 294, 1080, 1692, 1704
HpySE526I ACGT 2 cut(s) 93, 1072
Hsp92I GRCGYC 2 cut(s) 93, 405
HspAI GCGC 5 cut(s) 210, 582, 719, 794, 1217
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 1200
KspI CCGCGG 1 cut(s) 919
Kzo9I GATC 5 cut(s) 114, 588, 1083, 1200, 1383
LmnI GCTCC 3 cut(s) 579, 781, 1392
Lsp1109I GCAGC 2 cut(s) 53, 497
LweI GCATC 5 cut(s) 247, 613, 636, 1254, 1561
MaeI CTAG 4 cut(s) 618, 1350, 1409, 1544
MaeII ACGT 2 cut(s) 93, 1072
MalI GATC 5 cut(s) 116, 590, 1085, 1202, 1385
MbiI CCGCTC 1 cut(s) 861
MboI GATC 5 cut(s) 114, 588, 1083, 1200, 1383
MboII GAAGA 9 cut(s) 207, 259, 935, 1348, 1510, 1516, 1568, 1571, 1580
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 2 cut(s) 114, 1383
MhlI GDGCHC 4 cut(s) 165, 535, 1230, 1397
MlsI TGGCCA 1 cut(s) 1601
MluCI AATT 8 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427
MluNI TGGCCA 1 cut(s) 1601
MlyI GAGTC 4 cut(s) 560, 752, 966, 1292
MmeI TCCRAC 3 cut(s) 106, 213, 1329
Mox20I TGGCCA 1 cut(s) 1601
Mph1103I ATGCAT 2 cut(s) 912, 1281
MroNI GCCGGC 1 cut(s) 401
MscI TGGCCA 1 cut(s) 1601
MseI TTAA 4 cut(s) 42, 345, 1259, 1577
MslI CAYNNNNRTG 1 cut(s) 803
Msp20I TGGCCA 1 cut(s) 1601
MspA1I CMGCKG 1 cut(s) 918
MspI CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
MspR9I CCNGG 3 cut(s) 1018, 1389, 1632
MunI CAATTG 1 cut(s) 870
MvaI CCWGG 2 cut(s) 1389, 1632
MvnI CGCG 3 cut(s) 210, 584, 918
MwoI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
NaeI GCCGGC 1 cut(s) 403
NciI CCSGG 1 cut(s) 1018
NcoI CCATGG 1 cut(s) 489
NdeI CATATG 1 cut(s) 498
NdeII GATC 5 cut(s) 114, 588, 1083, 1200, 1383
NgoMIV GCCGGC 1 cut(s) 401
NlaIV GGNNCC 2 cut(s) 969, 1736
NmeAIII GCCGAG 1 cut(s) 1145
NsbI TGCGCA 1 cut(s) 1218
NsiI ATGCAT 2 cut(s) 912, 1281
NspI RCATGY 2 cut(s) 808, 1133
PasI CCCWGGG 1 cut(s) 1388
PceI AGGCCT 1 cut(s) 395
PciI ACATGT 2 cut(s) 804, 1129
PcsI WCGNNNNNNNCGW 1 cut(s) 581
PdiI GCCGGC 1 cut(s) 403
PfeI GAWTC 3 cut(s) 236, 766, 1657
PinAI ACCGGT 1 cut(s) 299
PkrI GCNGC 3 cut(s) 68, 512, 917
PleI GAGTC 4 cut(s) 560, 751, 965, 1291
PpsI GAGTC 4 cut(s) 560, 751, 965, 1291
PscI ACATGT 2 cut(s) 804, 1129
PsiI TTATAA 1 cut(s) 1713
Psp124BI GAGCTC 1 cut(s) 1230
Psp6I CCWGG 2 cut(s) 1387, 1630
PspGI CCWGG 2 cut(s) 1387, 1630
PspN4I GGNNCC 2 cut(s) 969, 1736
PspPI GGNCC 2 cut(s) 139, 1735
PsuI RGATCY 2 cut(s) 114, 1383
RsaI GTAC 4 cut(s) 706, 1043, 1077, 1697
RsaNI GTAC 4 cut(s) 705, 1042, 1076, 1696
RseI CAYNNNNRTG 1 cut(s) 803
SacI GAGCTC 1 cut(s) 1230
SacII CCGCGG 1 cut(s) 919
SaqAI TTAA 4 cut(s) 42, 345, 1259, 1577
SatI GCNGC 3 cut(s) 67, 511, 916
Sau3AI GATC 5 cut(s) 114, 588, 1083, 1200, 1383
Sau96I GGNCC 2 cut(s) 139, 1735
SchI GAGTC 4 cut(s) 560, 752, 966, 1292
ScrFI CCNGG 3 cut(s) 1018, 1389, 1632
SduI GDGCHC 4 cut(s) 165, 535, 1230, 1397
SfaNI GCATC 5 cut(s) 247, 613, 636, 1254, 1561
Sfr303I CCGCGG 1 cut(s) 919
SgrBI CCGCGG 1 cut(s) 919
SinI GGWCC 1 cut(s) 1735
SmiMI CAYNNNNRTG 1 cut(s) 803
SmlI CTYRAG 4 cut(s) 194, 389, 722, 1229
SmoI CTYRAG 4 cut(s) 194, 389, 722, 1229
Sse9I AATT 8 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427
SseBI AGGCCT 1 cut(s) 395
SsiI CCGC 9 cut(s) 183, 208, 513, 626, 656, 861, 916, 918, 1663
SspI AATATT 1 cut(s) 8
SspMI CTAG 4 cut(s) 618, 1350, 1409, 1544
SstI GAGCTC 1 cut(s) 1230
StuI AGGCCT 1 cut(s) 395
StyD4I CCNGG 3 cut(s) 1016, 1387, 1630
StyI CCWWGG 2 cut(s) 489, 1251
TaaI ACNGT 3 cut(s) 87, 277, 1458
TaiI ACGT 2 cut(s) 96, 1075
TaqI TCGA 4 cut(s) 1026, 1086, 1286, 1717
TaqII GACCGA 1 cut(s) 1752
TasI AATT 8 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427
TatI WGTACW 1 cut(s) 1695
TauI GCSGC 1 cut(s) 918
TfiI GAWTC 3 cut(s) 236, 766, 1657
Tru1I TTAA 4 cut(s) 42, 345, 1259, 1577
Tru9I TTAA 4 cut(s) 42, 345, 1259, 1577
TscAI CASTG 1 cut(s) 1210
TseI GCWGC 2 cut(s) 66, 510
TspDTI ATGAA 9 cut(s) 425, 485, 564, 1337, 1391, 1488, 1500, 1517, 1569
TspGWI ACGGA 1 cut(s) 550
TspRI CASTG 1 cut(s) 1210
VneI GTGCAC 1 cut(s) 531
VpaK11BI GGWCC 1 cut(s) 1735
XapI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
XceI RCATGY 2 cut(s) 808, 1133
XcmI CCANNNNNNNNNTGG 1 cut(s) 1760
XspI CTAG 4 cut(s) 618, 1350, 1409, 1544
ZraI GACGTC 1 cut(s) 94
Zsp2I ATGCAT 2 cut(s) 912, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.