RLG00000011529

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006671
Physical Location & Seq
Forward (+)
10286590 .. 10288444
1855 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011529

Sequence Viewer

Length: 1794 bp
ATGCAATATTTCCAAACCCTGAAAAGAAGCAAGGTCATCATTAACACCAGAGAAGCAGAGCAGAGCTGCTTGGCTCTACTCCAACTGTGTGACGTCGTTCCGAAGCTGACGCAAATCCAAGCCCACATTGTCAAATTGGGCCTCCGAAACAACCCCTTAGTGCTCACCAAGTTCGCCTCCACCGCCTCCGACCTCAAGGCCGTTGACCACGCCTCTTCCTTCCTGTTCTCGCCGGATTCCGATACCCATTTATACGATGCGTTTCTCTTCAACACCATTATCAGGGCTTACGCTCAGACCAGTCATGCGAAGCATAAAGCTTTGTGCTTTTACAGAGTTATGGTTAAAGGTGAAGTCTTGCCTAATAAATTCACCTACCCTTTTGTTCTCAAGGCCTGTGCCGGCGTCGGGGACTTGAATTTGGGGAAGTCGGTTCACGGGTCGGTGGTAAAATTCGGGTTTGGTGATGATGTCCATGTTCGGAACACCATGGTTCATATGTACTGTTGTTGCAGTGGAGGGATTGAAAGTGCACGGAAGGTGTTTGATGAAACGCCTAACTGGGACTCTGTTTCGTGGAGCGTGATGATTGGAGGGTATGTGAGGGTGGGGTGGTCTAGTGATGCGGTGGAGTTGTTTAGGGAGATGCAGATGGCGGGAGTGAGGCCGGATGAGATTACTATGGTTTCGGTTTTGTCTGCGTGTACCGATTTGGGTGCGCTTGAGCTTGGCAAGTGGGTGGAGTCCTACATTGAGAAAGAGGATATTCAGAAAAGTGTGGAGCTTTGTAATGCGCTCATTGACATGTTTGCTAAGTGTGGCAATGTTGGTAAGGCTTTGAAATTGTTTAGGAACATGAGCGGGAGAACAATTGTTTCTTGGACTTCTGTGATTGATGGTTTGGCAATGCATGGCCGCGGAGAAGAGGCTGTTTCTTTGTTTGAGGAAATGATTGGTGTAGGGGTGGAACCGGATGATGTTGCGTTTATAGGACTGCTTTCGGCTTGTAGTCATTCCGGGTTGGTCGATAAGGGGAAGAGGTACTTCAGTTCAATGATGGAAAAATTTGGACGTGTACCTAAGATCGAACACTATGGATGCATGGTGGATATGTTATGCCGAGCTGGACATGTTAAGGAGGCATTGGAGTTTATTCGGAAAATGCCTATTCAGCCAAATCCAATAGTTTTGCGAACCCTGATCAGTGCTTGCCGTGCGCATGGTGAGCTCAAGCTTGGAGAGAGCATCACCAAGGAGTTAATCAGGGCTGAACCTATGCATGAGTCGAACTATGTCCTGCTTTCCAACATCTATGCAAAAATGAACCATTGGGAGAAGAAAACCAAGACTAGAGAGGCGATGGACCAGAAAGGGATGAAAAAGATCCCTGGGAGCACTATGATTGAGTTAGATAATGAAATTTACGAATTTGTGGCAGGGGATAAATCGCATAAACAGTCCAAAGAGATTTATGAAATGGTTGATGAAATGGGGAGGAAGATCAAGAGGGCTGGATATGTTCCCACTACATCAGAGGTTTTGCTAGACATTGGTGAAGAAGATAAAGAAGATGCTTTAAATAGGCATAGTGAAAAGTTGGCCATTGCTTTCGCCCTCCTGAACATGCCGCCGGGAACTCCTATTCGCATAGTAAAGAATCTGCGGGTTTGTGATGATTGCCACTCTGCTACTAAGTACATCTCTAAGATTTATAATCGAGAAATAGTGGTGAGGGACCGAAACAGGTTTCACCATTTCAAGGGTGGTCTGTGTTCTTGTAGAGATTTCTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

598

Amino Acids

67.11

Weight (kDa)

8.16

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 134 1.1e-06 PPR repeat family
PPR_2 PF13041 189 - 235 4e-09 PPR repeat family
PPR PF01535 191 - 221 2.2e-07 PPR repeat
PPR_2 PF13041 290 - 337 5.3e-10 PPR repeat family
PPR PF01535 292 - 322 3.7e-08 PPR repeat
PPR_1 PF12854 362 - 388 3.5e-06 PPR repeat
E_motif PF20431 407 - 469 1.3e-13 E motif
Eplus_motif PF20430 474 - 501 1.7e-07 E+ motif
DYW_deaminase PF14432 505 - 597 2.6e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1713
AatII GACGTC 1 cut(s) 96
Acc16I TGCGCA 1 cut(s) 1218
AccBSI CCGCTC 1 cut(s) 861
AccII CGCG 1 cut(s) 918
AciI CCGC 8 cut(s) 183, 626, 656, 861, 916, 918, 1628, 1663
AclWI GGATC 1 cut(s) 1378
AcoI YGGCCR 2 cut(s) 913, 1599
AcsI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
AcuI CTGAAG 1 cut(s) 1030
AcyI GRCGYC 2 cut(s) 93, 405
AfaI GTAC 5 cut(s) 503, 706, 1043, 1077, 1697
AfiI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
AflIII ACRYGT 3 cut(s) 804, 1072, 1129
AgsI TTSAA 6 cut(s) 271, 418, 527, 841, 1053, 1759
AjiI CACGTC 1 cut(s) 1073
AjnI CCWGG 1 cut(s) 1387
AluBI AGCT 8 cut(s) 66, 106, 320, 727, 784, 1124, 1228, 1234
AluI AGCT 8 cut(s) 66, 106, 320, 727, 784, 1124, 1228, 1234
Alw21I GWGCWC 4 cut(s) 165, 535, 1230, 1397
Alw44I GTGCAC 1 cut(s) 531
AlwI GGATC 1 cut(s) 1378
AoxI GGCC 6 cut(s) 139, 198, 393, 665, 913, 1599
ApaLI GTGCAC 1 cut(s) 531
ApeKI GCWGC 1 cut(s) 66
ApoI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
AspLEI GCGC 3 cut(s) 721, 796, 1219
AspS9I GGNCC 3 cut(s) 139, 1363, 1735
AsuC2I CCSGG 2 cut(s) 1018, 1632
AsuHPI GGTGA 9 cut(s) 157, 362, 364, 476, 1235, 1240, 1565, 1741, 1742
AvaII GGWCC 2 cut(s) 1363, 1735
BaeGI GKGCMC 1 cut(s) 535
BaeI ACNNNNGTAYC 2 cut(s) 1033, 1066
BalI TGGCCA 1 cut(s) 1601
BanII GRGCYC 1 cut(s) 1230
Bbv12I GWGCWC 4 cut(s) 165, 535, 1230, 1397
BbvI GCAGC 1 cut(s) 53
BccI CCATC 4 cut(s) 646, 890, 1051, 1354
BceAI ACGGC 2 cut(s) 185, 1197
BcgI CGANNNNNNTGC 2 cut(s) 698, 732
BciT130I CCWGG 1 cut(s) 1389
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 1018, 1632
BfaI CTAG 3 cut(s) 618, 1350, 1544
BisI GCNGC 3 cut(s) 67, 916, 1628
BlsI GCNGC 3 cut(s) 68, 917, 1629
Bme1390I CCNGG 3 cut(s) 1018, 1389, 1632
Bme18I GGWCC 2 cut(s) 1363, 1735
BmgBI CACGTC 1 cut(s) 1073
BmgT120I GGNCC 3 cut(s) 139, 1363, 1735
BmiI GGNNCC 2 cut(s) 969, 1736
BmrFI CCNGG 3 cut(s) 1018, 1389, 1632
BmrI ACTGGG 1 cut(s) 571
BmsI GCATC 6 cut(s) 247, 613, 636, 1088, 1254, 1561
BmuI ACTGGG 1 cut(s) 571
BpuEI CTTGAG 4 cut(s) 179, 374, 743, 1214
BpuMI CCSGG 2 cut(s) 1018, 1632
BsaHI GRCGYC 2 cut(s) 93, 405
BsaJI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BsaWI WCCGGW 1 cut(s) 970
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 408, 1759
Bse118I RCCGGY 1 cut(s) 401
Bse1I ACTGG 2 cut(s) 300, 566
Bse3DI GCAATG 3 cut(s) 829, 912, 1602
BseBI CCWGG 1 cut(s) 1389
BseDI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BseGI GGATG 4 cut(s) 676, 979, 1103, 1380
BseLI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
BseMI GCAATG 3 cut(s) 829, 912, 1602
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 2 cut(s) 300, 566
BseSI GKGCMC 1 cut(s) 535
BseXI GCAGC 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 918
BshFI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BsiHKAI GWGCWC 4 cut(s) 165, 535, 1230, 1397
BsiSI CCGG 6 cut(s) 233, 402, 668, 971, 1017, 1631
BslFI GGGAC 3 cut(s) 425, 578, 1748
BslI CCNNNNNNNGG 3 cut(s) 282, 408, 1759
BsmFI GGGAC 3 cut(s) 425, 578, 1748
BsnI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
Bsp1286I GDGCHC 4 cut(s) 165, 535, 1230, 1397
Bsp143I GATC 4 cut(s) 1083, 1200, 1383, 1500
Bsp19I CCATGG 1 cut(s) 489
BspACI CCGC 8 cut(s) 183, 626, 656, 861, 916, 918, 1628, 1663
BspANI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BspCNI CTCAG 1 cut(s) 307
BspFNI CGCG 1 cut(s) 918
BspLI GGNNCC 2 cut(s) 969, 1736
BspPI GGATC 1 cut(s) 1378
BsrBI CCGCTC 1 cut(s) 861
BsrDI GCAATG 3 cut(s) 829, 912, 1602
BsrFI RCCGGY 1 cut(s) 401
BsrI ACTGG 2 cut(s) 300, 566
BssAI RCCGGY 1 cut(s) 401
BssECI CCNNGG 5 cut(s) 489, 916, 1251, 1387, 1388
BssMI GATC 4 cut(s) 1083, 1200, 1383, 1500
BssNI GRCGYC 2 cut(s) 93, 405
BssT1I CCWWGG 2 cut(s) 489, 1251
Bst2UI CCWGG 1 cut(s) 1389
Bst4CI ACNGT 3 cut(s) 87, 506, 1458
Bst6I CTCTTC 4 cut(s) 220, 272, 918, 1031
BstACI GRCGYC 2 cut(s) 93, 405
BstC8I GCNNGC 2 cut(s) 403, 1210
BstDEI CTNAG 6 cut(s) 157, 294, 813, 1080, 1692, 1704
BstDSI CCRYGG 2 cut(s) 489, 916
BstF5I GGATG 4 cut(s) 676, 979, 1103, 1380
BstFNI CGCG 1 cut(s) 918
BstHHI GCGC 3 cut(s) 721, 796, 1219
BstKTI GATC 4 cut(s) 1086, 1203, 1386, 1503
BstMBI GATC 4 cut(s) 1083, 1200, 1383, 1500
BstMWI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
BstNI CCWGG 1 cut(s) 1389
BstNSI RCATGY 3 cut(s) 808, 1133, 1627
BstSCI CCNGG 3 cut(s) 1016, 1387, 1630
BstSLI GKGCMC 1 cut(s) 535
BstUI CGCG 1 cut(s) 918
BstV1I GCAGC 1 cut(s) 53
BstX2I RGATCY 1 cut(s) 1383
BstYI RGATCY 1 cut(s) 1383
BsuRI GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
BtgI CCRYGG 2 cut(s) 489, 916
BtgZI GCGATG 1 cut(s) 1373
BtrI CACGTC 1 cut(s) 1073
BtsCI GGATG 4 cut(s) 676, 979, 1103, 1380
BtsI GCAGTG 1 cut(s) 520
BtsIMutI CAGTG 2 cut(s) 520, 1210
Cac8I GCNNGC 2 cut(s) 403, 1210
CfoI GCGC 3 cut(s) 721, 796, 1219
Cfr10I RCCGGY 1 cut(s) 401
Cfr13I GGNCC 3 cut(s) 139, 1363, 1735
Cfr42I CCGCGG 1 cut(s) 919
CseI GACGC 2 cut(s) 118, 394
Csp6I GTAC 5 cut(s) 502, 705, 1042, 1076, 1696
CviQI GTAC 5 cut(s) 502, 705, 1042, 1076, 1696
DdeI CTNAG 6 cut(s) 157, 294, 813, 1080, 1692, 1704
DpnI GATC 4 cut(s) 1085, 1202, 1385, 1502
DpnII GATC 4 cut(s) 1083, 1200, 1383, 1500
DraI TTTAAA 1 cut(s) 1578
EaeI YGGCCR 2 cut(s) 913, 1599
Eam1104I CTCTTC 4 cut(s) 220, 272, 918, 1031
EarI CTCTTC 4 cut(s) 220, 272, 918, 1031
Ecl136II GAGCTC 1 cut(s) 1228
Eco130I CCWWGG 2 cut(s) 489, 1251
Eco147I AGGCCT 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 1230
Eco47I GGWCC 2 cut(s) 1363, 1735
Eco53kI GAGCTC 1 cut(s) 1228
Eco57I CTGAAG 1 cut(s) 1030
EcoICRI GAGCTC 1 cut(s) 1228
EcoRII CCWGG 1 cut(s) 1387
EcoT14I CCWWGG 2 cut(s) 489, 1251
EcoT22I ATGCAT 3 cut(s) 912, 1103, 1281
EcoT38I GRGCYC 1 cut(s) 1230
ErhI CCWWGG 2 cut(s) 489, 1251
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FaqI GGGAC 3 cut(s) 425, 578, 1748
FauI CCCGC 3 cut(s) 649, 854, 1656
FauNDI CATATG 1 cut(s) 498
FbaI TGATCA 1 cut(s) 1200
Fnu4HI GCNGC 3 cut(s) 67, 916, 1628
FokI GGATG 4 cut(s) 683, 986, 1110, 1387
FriOI GRGCYC 1 cut(s) 1230
Fsp4HI GCNGC 3 cut(s) 67, 916, 1628
FspAI RTGCGCAY 1 cut(s) 1218
FspBI CTAG 3 cut(s) 618, 1350, 1544
FspI TGCGCA 1 cut(s) 1218
GlaI GCGC 3 cut(s) 720, 795, 1218
GluI GCNGC 3 cut(s) 67, 916, 1628
HaeIII GGCC 6 cut(s) 141, 200, 395, 667, 915, 1601
HapII CCGG 6 cut(s) 233, 402, 668, 971, 1017, 1631
HgaI GACGC 2 cut(s) 118, 394
HhaI GCGC 3 cut(s) 721, 796, 1219
Hin1I GRCGYC 2 cut(s) 93, 405
Hin6I GCGC 3 cut(s) 719, 794, 1217
HinP1I GCGC 3 cut(s) 719, 794, 1217
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HindIII AAGCTT 2 cut(s) 318, 1232
HinfI GANTC 5 cut(s) 236, 566, 743, 1283, 1657
HpaII CCGG 6 cut(s) 233, 402, 668, 971, 1017, 1631
HphI GGTGA 9 cut(s) 157, 362, 364, 476, 1235, 1240, 1565, 1741, 1742
Hpy166II GTNNAC 5 cut(s) 205, 436, 533, 705, 1076
Hpy188I TCNGA 9 cut(s) 102, 146, 190, 241, 297, 483, 771, 1158, 1534
Hpy188III TCNNGA 3 cut(s) 1504, 1618, 1718
Hpy8I GTNNAC 5 cut(s) 205, 436, 533, 705, 1076
Hpy99I CGWCG 2 cut(s) 98, 410
HpyAV CCTTC 2 cut(s) 229, 532
HpyCH4III ACNGT 3 cut(s) 87, 506, 1458
HpyCH4IV ACGT 2 cut(s) 93, 1072
HpyCH4V TGCA 8 cut(s) 4, 513, 533, 649, 910, 1101, 1279, 1316
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
HpyF3I CTNAG 6 cut(s) 157, 294, 813, 1080, 1692, 1704
HpySE526I ACGT 2 cut(s) 93, 1072
Hsp92I GRCGYC 2 cut(s) 93, 405
HspAI GCGC 3 cut(s) 719, 794, 1217
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 1200
KspI CCGCGG 1 cut(s) 919
Kzo9I GATC 4 cut(s) 1083, 1200, 1383, 1500
LmnI GCTCC 3 cut(s) 579, 781, 1392
Lsp1109I GCAGC 1 cut(s) 53
LweI GCATC 6 cut(s) 247, 613, 636, 1088, 1254, 1561
MaeI CTAG 3 cut(s) 618, 1350, 1544
MaeII ACGT 2 cut(s) 93, 1072
MaeIII GTNAC 1 cut(s) 89
MalI GATC 4 cut(s) 1085, 1202, 1385, 1502
MbiI CCGCTC 1 cut(s) 861
MboI GATC 4 cut(s) 1083, 1200, 1383, 1500
MboII GAAGA 9 cut(s) 207, 259, 935, 1048, 1348, 1510, 1568, 1571, 1580
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 1 cut(s) 1383
MhlI GDGCHC 4 cut(s) 165, 535, 1230, 1397
MlsI TGGCCA 1 cut(s) 1601
MluCI AATT 9 cut(s) 134, 368, 418, 452, 842, 870, 1064, 1419, 1427
MluNI TGGCCA 1 cut(s) 1601
MlyI GAGTC 3 cut(s) 560, 752, 1292
MmeI TCCRAC 3 cut(s) 106, 213, 1329
Mox20I TGGCCA 1 cut(s) 1601
Mph1103I ATGCAT 3 cut(s) 912, 1103, 1281
MroNI GCCGGC 1 cut(s) 401
MscI TGGCCA 1 cut(s) 1601
MseI TTAA 5 cut(s) 42, 345, 1134, 1259, 1577
MslI CAYNNNNRTG 1 cut(s) 803
Msp20I TGGCCA 1 cut(s) 1601
MspA1I CMGCKG 1 cut(s) 918
MspI CCGG 6 cut(s) 233, 402, 668, 971, 1017, 1631
MspR9I CCNGG 3 cut(s) 1018, 1389, 1632
MunI CAATTG 1 cut(s) 870
MvaI CCWGG 1 cut(s) 1389
MvnI CGCG 1 cut(s) 918
MwoI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
NaeI GCCGGC 1 cut(s) 403
NciI CCSGG 2 cut(s) 1018, 1632
NcoI CCATGG 1 cut(s) 489
NdeI CATATG 1 cut(s) 498
NdeII GATC 4 cut(s) 1083, 1200, 1383, 1500
NgoMIV GCCGGC 1 cut(s) 401
NlaIV GGNNCC 2 cut(s) 969, 1736
NmeAIII GCCGAG 1 cut(s) 1145
NmuCI GTSAC 1 cut(s) 89
NsbI TGCGCA 1 cut(s) 1218
NsiI ATGCAT 3 cut(s) 912, 1103, 1281
NspI RCATGY 3 cut(s) 808, 1133, 1627
PasI CCCWGGG 1 cut(s) 1388
PceI AGGCCT 1 cut(s) 395
PciI ACATGT 2 cut(s) 804, 1129
PdiI GCCGGC 1 cut(s) 403
PfeI GAWTC 2 cut(s) 236, 1657
PkrI GCNGC 3 cut(s) 68, 917, 1629
PleI GAGTC 3 cut(s) 560, 751, 1291
PpsI GAGTC 3 cut(s) 560, 751, 1291
PscI ACATGT 2 cut(s) 804, 1129
PsiI TTATAA 1 cut(s) 1713
Psp124BI GAGCTC 1 cut(s) 1230
Psp6I CCWGG 1 cut(s) 1387
PspGI CCWGG 1 cut(s) 1387
PspN4I GGNNCC 2 cut(s) 969, 1736
PspPI GGNCC 3 cut(s) 139, 1363, 1735
PsuI RGATCY 1 cut(s) 1383
RsaI GTAC 5 cut(s) 503, 706, 1043, 1077, 1697
RsaNI GTAC 5 cut(s) 502, 705, 1042, 1076, 1696
RseI CAYNNNNRTG 1 cut(s) 803
SacI GAGCTC 1 cut(s) 1230
SacII CCGCGG 1 cut(s) 919
SaqAI TTAA 5 cut(s) 42, 345, 1134, 1259, 1577
SatI GCNGC 3 cut(s) 67, 916, 1628
Sau3AI GATC 4 cut(s) 1083, 1200, 1383, 1500
Sau96I GGNCC 3 cut(s) 139, 1363, 1735
SchI GAGTC 3 cut(s) 560, 752, 1292
ScrFI CCNGG 3 cut(s) 1018, 1389, 1632
SduI GDGCHC 4 cut(s) 165, 535, 1230, 1397
SfaNI GCATC 6 cut(s) 247, 613, 636, 1088, 1254, 1561
Sfr303I CCGCGG 1 cut(s) 919
SgrBI CCGCGG 1 cut(s) 919
SinI GGWCC 2 cut(s) 1363, 1735
SmiMI CAYNNNNRTG 1 cut(s) 803
SmlI CTYRAG 4 cut(s) 194, 389, 722, 1229
SmoI CTYRAG 4 cut(s) 194, 389, 722, 1229
Sse9I AATT 9 cut(s) 134, 368, 418, 452, 842, 870, 1064, 1419, 1427
SseBI AGGCCT 1 cut(s) 395
SsiI CCGC 8 cut(s) 183, 626, 656, 861, 916, 918, 1628, 1663
SspI AATATT 1 cut(s) 8
SspMI CTAG 3 cut(s) 618, 1350, 1544
SstI GAGCTC 1 cut(s) 1230
StuI AGGCCT 1 cut(s) 395
StyD4I CCNGG 3 cut(s) 1016, 1387, 1630
StyI CCWWGG 2 cut(s) 489, 1251
TaaI ACNGT 3 cut(s) 87, 506, 1458
TaiI ACGT 2 cut(s) 96, 1075
TaqI TCGA 4 cut(s) 1026, 1086, 1286, 1717
TaqII GACCGA 1 cut(s) 1752
TasI AATT 9 cut(s) 134, 368, 418, 452, 842, 870, 1064, 1419, 1427
TatI WGTACW 2 cut(s) 501, 1695
TauI GCSGC 2 cut(s) 918, 1630
TfiI GAWTC 2 cut(s) 236, 1657
Tru1I TTAA 5 cut(s) 42, 345, 1134, 1259, 1577
Tru9I TTAA 5 cut(s) 42, 345, 1134, 1259, 1577
TscAI CASTG 2 cut(s) 520, 1210
TseFI GTSAC 1 cut(s) 89
TseI GCWGC 1 cut(s) 66
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 7 cut(s) 485, 564, 1337, 1391, 1431, 1488, 1500
TspGWI ACGGA 1 cut(s) 550
TspRI CASTG 2 cut(s) 520, 1210
VneI GTGCAC 1 cut(s) 531
VpaK11BI GGWCC 2 cut(s) 1363, 1735
XapI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
XceI RCATGY 3 cut(s) 808, 1133, 1627
XcmI CCANNNNNNNNNTGG 1 cut(s) 1760
XspI CTAG 3 cut(s) 618, 1350, 1544
ZraI GACGTC 1 cut(s) 94
Zsp2I ATGCAT 3 cut(s) 912, 1103, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.