Rh6AG389400

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006671
Physical Location & Seq
Reverse (-)
58820274 .. 58829028
8755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG389400.1

Sequence Viewer

Length: 1842 bp
ATGCAATATTTCCAAACCCTGAAAAGAAGCAAGCTCATCATTAACACCAGAGAAGCAGAGCAGAGCTGCTTGGCTCTACTCCAACTGTGCGACGTCGTTCCGAAGCTGACCCAGATCCAAGCCCACATTGTCAAATTGGGCCTCCGAAACAACCCCTTAGTGCTCACCAAGTTCGCCTCCACCGCCTCCGACCTCAAGGCCATTGACCGCGCCTCTTCCTTCCTGTTCTCGCCGGATTCCGATACCCATTTATACGATGCGTTTCTCTTCAACACCGTCATCAGGGCTTACGCTCAGACCGGTCATGCAAAGCATAAAGCTTTGTGCTTTTACAGATTTATGGTTAAAGGTGTAGTCTTGCCTAATAAATTCACCTACCCTTTTGTTCTCAAGGCCTGTGCCGGCGTCGGGGACTTGAATTTGGGGAAGTCGGTTCATGGGTCGGTGGTGAAATTCGGATTTGGCGATGATGTCCATGTTCGGAACACCATGGTTCATATGTACTGTTGCTGCGGTGGAGGGATTGAAAGTGCACGGAAGGTGTTCGATGAAATGCCTAACTGGGACTCTGTTTCGTGGAGCGCGATGATCGGAGGGTATGTGAGGGTGGGGTGGTCTAGTGATGCGGTGGAGTTGTTTAGGGAGATGCAGATGGCGGGAGTGAGGCCGGACGAGATTACTATGGTTTCGGTTTTGTCTGCGTGTACCGATTTGGGTGCGCTTGAGCTTGGCAAGTGGGTGGAGTCCTATATTGAGAAAGAGGGGATTCAGAAAAGTGTGGAGCTTTGTAATGCGCTCATTGACATGTTTGCGAAATGTGGCAATGTTGATAAGGCTTTGAAGTTGTTTAGGAACATGAGCGGGAGAACAATTGTTTCTTGGACTTCTGTGATTGATGGTTTGGCAATGCATGGCCGCGGAGTAGAGGCCGTTTCTTTGTTTGAGGAAATGATTGGAGTCGGGGTGGGACCGGATGATGTTGCGTTTATAGGACTGCTTTCGGCTTGTAGTCATTCCGGGTTGGTCGATAAGGGAAAGAGGTACTTCAGTTCAATGATGGAAAAATTTGGACGTGTACCTAAGATCGAACACTATGGGTGCATGGTGGATATGTTATGCCGAGCTGGACATGTCAAGGAGGCATTGGAGTTTATTCGGAAAATGCCTATTCAGCCAAATCCAATAGTTTTGCGAACCCTGATCAGTGCTTGCCGTGCGCATGGCGAGCTCAAGCTTGGAGAGAGCATCACCAAGGAGTTAATCAGGGCTGAACCTATGCATGAGTCGAACTATGTCCTGCTTTCCAACATCTATGCAAAAATGAACCATTGGGAGAAGAAAACCAAGACTAGAGAGGCGATGGACAAGAAAGGGATGAAAAAGATCCCTGGGAGCACTATGATTGAGCTAGATAATCAAATTTACGAATTTGTGGCAGGGGATAAATCGCATAAACAGTCCAAAGAGATTTATGAAATGGTTGATGAAATGGGGAGGAAGATGAAGAGGGCTGGATATGTTCCCACTACATCAGAGCCTCTCATCACGAAAACCCCAAGCACAGAGCAATCGAGCCAAACACCATCACATCATGACCTGAACCCACATCCTCCCCCAATTTCAGATCGGGAAGCCAGCTTTTCTTCATCCTCTCTTTACTACAGAACGCATCCTGGTGCTCAAATGGTGATGAAGAAGAAGACAAGGAAGTTGGTTGGAAATACCTTCATGGTGATGTTTTCAGACAACCTTCAAACATACCACTGTTTTGTGCCGTCTTGTTCAAGATCCAAAGACACCGATCTGGAAAACCTTGGAAAGGATGTTATTCATCATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

613

Amino Acids

68.53

Weight (kDa)

8.74

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 134 2e-06 PPR repeat family
PPR_2 PF13041 189 - 235 2.6e-09 PPR repeat family
PPR PF01535 191 - 221 1.5e-07 PPR repeat
PPR_2 PF13041 290 - 337 6.6e-08 PPR repeat family
PPR PF01535 292 - 322 3.6e-07 PPR repeat
PPR_1 PF12854 362 - 388 3.6e-06 PPR repeat
E_motif PF20431 407 - 469 9.3e-14 E motif
Eplus_motif PF20430 474 - 501 1.1e-07 E+ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
Acc16I TGCGCA 1 cut(s) 1218
AccBSI CCGCTC 1 cut(s) 861
AccII CGCG 3 cut(s) 210, 584, 918
AciI CCGC 8 cut(s) 183, 208, 513, 626, 656, 861, 916, 918
AclWI GGATC 3 cut(s) 109, 1378, 1782
AcoI YGGCCR 1 cut(s) 913
AcsI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
AcuI CTGAAG 1 cut(s) 1030
AcyI GRCGYC 2 cut(s) 93, 405
AfaI GTAC 4 cut(s) 503, 706, 1043, 1077
AfiI CCNNNNNNNGG 3 cut(s) 282, 408, 1819
AflIII ACRYGT 3 cut(s) 804, 1072, 1129
AgeI ACCGGT 1 cut(s) 299
AgsI TTSAA 7 cut(s) 271, 418, 527, 841, 1053, 1754, 1785
AjiI CACGTC 1 cut(s) 1073
AjnI CCWGG 2 cut(s) 1387, 1672
Alw21I GWGCWC 5 cut(s) 165, 535, 1230, 1397, 1681
Alw44I GTGCAC 1 cut(s) 531
AlwI GGATC 3 cut(s) 109, 1378, 1782
AoxI GGCC 6 cut(s) 139, 198, 393, 665, 913, 927
ApaLI GTGCAC 1 cut(s) 531
ApeKI GCWGC 2 cut(s) 66, 510
ApoI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
AsiGI ACCGGT 1 cut(s) 299
Asp700I GAANNNNTTC 1 cut(s) 542
AspLEI GCGC 5 cut(s) 212, 584, 721, 796, 1219
AspS9I GGNCC 2 cut(s) 139, 968
AsuC2I CCSGG 1 cut(s) 1018
AsuHPI GGTGA 6 cut(s) 157, 364, 460, 1240, 1699, 1744
AvaII GGWCC 1 cut(s) 968
BaeGI GKGCMC 1 cut(s) 535
BaeI ACNNNNGTAYC 2 cut(s) 1033, 1066
BanII GRGCYC 1 cut(s) 1230
BbsI GAAGAC 1 cut(s) 1706
Bbv12I GWGCWC 5 cut(s) 165, 535, 1230, 1397, 1681
BbvI GCAGC 2 cut(s) 53, 497
BccI CCATC 5 cut(s) 646, 890, 1051, 1354, 1591
BceAI ACGGC 3 cut(s) 914, 1197, 1759
BcgI CGANNNNNNTGC 2 cut(s) 698, 732
BciT130I CCWGG 2 cut(s) 1389, 1674
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 1 cut(s) 1018
BfaI CTAG 3 cut(s) 618, 1350, 1409
BfmI CTRYAG 1 cut(s) 1660
BisI GCNGC 3 cut(s) 67, 511, 916
BlsI GCNGC 3 cut(s) 68, 512, 917
Bme1390I CCNGG 3 cut(s) 1018, 1389, 1674
Bme18I GGWCC 1 cut(s) 968
BmgBI CACGTC 1 cut(s) 1073
BmgT120I GGNCC 2 cut(s) 139, 968
BmiI GGNNCC 1 cut(s) 969
BmrFI CCNGG 3 cut(s) 1018, 1389, 1674
BmrI ACTGGG 1 cut(s) 571
BmsI GCATC 5 cut(s) 247, 613, 636, 1254, 1678
BmuI ACTGGG 1 cut(s) 571
BpiI GAAGAC 1 cut(s) 1706
BpuEI CTTGAG 4 cut(s) 179, 374, 743, 1214
BpuMI CCSGG 1 cut(s) 1018
BsaHI GRCGYC 2 cut(s) 93, 405
BsaJI CCNNGG 6 cut(s) 489, 916, 1251, 1387, 1388, 1813
BsaWI WCCGGW 2 cut(s) 299, 970
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 948, 978
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 408, 1819
Bse118I RCCGGY 2 cut(s) 299, 401
Bse1I ACTGG 1 cut(s) 566
Bse3DI GCAATG 2 cut(s) 829, 912
BseBI CCWGG 2 cut(s) 1389, 1674
BseDI CCNNGG 6 cut(s) 489, 916, 1251, 1387, 1388, 1813
BseGI GGATG 6 cut(s) 979, 1380, 1606, 1646, 1669, 1828
BseLI CCNNNNNNNGG 3 cut(s) 282, 408, 1819
BseMI GCAATG 2 cut(s) 829, 912
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 1 cut(s) 566
BseSI GKGCMC 1 cut(s) 535
BseXI GCAGC 2 cut(s) 53, 497
Bsh1236I CGCG 3 cut(s) 210, 584, 918
BshFI GGCC 6 cut(s) 141, 200, 395, 667, 915, 929
BshTI ACCGGT 1 cut(s) 299
BsiHKAI GWGCWC 5 cut(s) 165, 535, 1230, 1397, 1681
BsiSI CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
BslFI GGGAC 3 cut(s) 425, 578, 981
BslI CCNNNNNNNGG 3 cut(s) 282, 408, 1819
BsmFI GGGAC 3 cut(s) 425, 578, 981
BsnI GGCC 6 cut(s) 141, 200, 395, 667, 915, 929
Bsp1286I GDGCHC 5 cut(s) 165, 535, 1230, 1397, 1681
Bsp143I GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
Bsp19I CCATGG 1 cut(s) 489
BspACI CCGC 8 cut(s) 183, 208, 513, 626, 656, 861, 916, 918
BspANI GGCC 6 cut(s) 141, 200, 395, 667, 915, 929
BspCNI CTCAG 1 cut(s) 307
BspFNI CGCG 3 cut(s) 210, 584, 918
BspHI TCATGA 1 cut(s) 1591
BspLI GGNNCC 1 cut(s) 969
BspPI GGATC 3 cut(s) 109, 1378, 1782
BsrBI CCGCTC 1 cut(s) 861
BsrDI GCAATG 2 cut(s) 829, 912
BsrFI RCCGGY 2 cut(s) 299, 401
BsrI ACTGG 1 cut(s) 566
BssAI RCCGGY 2 cut(s) 299, 401
BssECI CCNNGG 6 cut(s) 489, 916, 1251, 1387, 1388, 1813
BssMI GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
BssNI GRCGYC 2 cut(s) 93, 405
BssT1I CCWWGG 3 cut(s) 489, 1251, 1813
Bst2UI CCWGG 2 cut(s) 1389, 1674
Bst4CI ACNGT 5 cut(s) 87, 277, 506, 1458, 1766
Bst6I CTCTTC 3 cut(s) 220, 272, 1499
BstACI GRCGYC 2 cut(s) 93, 405
BstC8I GCNNGC 5 cut(s) 32, 403, 1210, 1226, 1636
BstDEI CTNAG 3 cut(s) 157, 294, 1080
BstDSI CCRYGG 2 cut(s) 489, 916
BstENI CCTNNNNNAGG 1 cut(s) 1817
BstF5I GGATG 6 cut(s) 979, 1380, 1606, 1646, 1669, 1828
BstFNI CGCG 3 cut(s) 210, 584, 918
BstHHI GCGC 5 cut(s) 212, 584, 721, 796, 1219
BstKTI GATC 8 cut(s) 117, 591, 1086, 1203, 1386, 1627, 1790, 1804
BstMBI GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
BstMWI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
BstNI CCWGG 2 cut(s) 1389, 1674
BstNSI RCATGY 2 cut(s) 808, 1133
BstSCI CCNGG 3 cut(s) 1016, 1387, 1672
BstSFI CTRYAG 1 cut(s) 1660
BstSLI GKGCMC 1 cut(s) 535
BstUI CGCG 3 cut(s) 210, 584, 918
BstV1I GCAGC 2 cut(s) 53, 497
BstV2I GAAGAC 1 cut(s) 1706
BstX2I RGATCY 3 cut(s) 114, 1383, 1787
BstYI RGATCY 3 cut(s) 114, 1383, 1787
BsuRI GGCC 6 cut(s) 141, 200, 395, 667, 915, 929
BtgI CCRYGG 2 cut(s) 489, 916
BtgZI GCGATG 3 cut(s) 480, 599, 1373
BtrI CACGTC 1 cut(s) 1073
BtsCI GGATG 6 cut(s) 979, 1380, 1606, 1646, 1669, 1828
BtsIMutI CAGTG 2 cut(s) 1210, 1762
Cac8I GCNNGC 5 cut(s) 32, 403, 1210, 1226, 1636
CciI TCATGA 1 cut(s) 1591
CfoI GCGC 5 cut(s) 212, 584, 721, 796, 1219
Cfr10I RCCGGY 2 cut(s) 299, 401
Cfr13I GGNCC 2 cut(s) 139, 968
Cfr42I CCGCGG 1 cut(s) 919
CseI GACGC 1 cut(s) 394
Csp6I GTAC 4 cut(s) 502, 705, 1042, 1076
CspAI ACCGGT 1 cut(s) 299
CviQI GTAC 4 cut(s) 502, 705, 1042, 1076
DdeI CTNAG 3 cut(s) 157, 294, 1080
DpnI GATC 8 cut(s) 116, 590, 1085, 1202, 1385, 1626, 1789, 1803
DpnII GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
EaeI YGGCCR 1 cut(s) 913
Eam1104I CTCTTC 3 cut(s) 220, 272, 1499
EarI CTCTTC 3 cut(s) 220, 272, 1499
Ecl136II GAGCTC 1 cut(s) 1228
Eco130I CCWWGG 3 cut(s) 489, 1251, 1813
Eco147I AGGCCT 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 1230
Eco47I GGWCC 1 cut(s) 968
Eco53kI GAGCTC 1 cut(s) 1228
Eco57I CTGAAG 1 cut(s) 1030
EcoICRI GAGCTC 1 cut(s) 1228
EcoNI CCTNNNNNAGG 1 cut(s) 1817
EcoRII CCWGG 2 cut(s) 1387, 1672
EcoT14I CCWWGG 3 cut(s) 489, 1251, 1813
EcoT22I ATGCAT 2 cut(s) 912, 1281
EcoT38I GRGCYC 1 cut(s) 1230
ErhI CCWWGG 3 cut(s) 489, 1251, 1813
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FaqI GGGAC 3 cut(s) 425, 578, 981
FauI CCCGC 2 cut(s) 649, 854
FauNDI CATATG 1 cut(s) 498
FbaI TGATCA 1 cut(s) 1200
Fnu4HI GCNGC 3 cut(s) 67, 511, 916
FokI GGATG 6 cut(s) 986, 1387, 1593, 1633, 1656, 1835
FriOI GRGCYC 1 cut(s) 1230
Fsp4HI GCNGC 3 cut(s) 67, 511, 916
FspAI RTGCGCAY 1 cut(s) 1218
FspBI CTAG 3 cut(s) 618, 1350, 1409
FspI TGCGCA 1 cut(s) 1218
GlaI GCGC 5 cut(s) 211, 583, 720, 795, 1218
GluI GCNGC 3 cut(s) 67, 511, 916
HaeIII GGCC 6 cut(s) 141, 200, 395, 667, 915, 929
HapII CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
HgaI GACGC 1 cut(s) 394
HhaI GCGC 5 cut(s) 212, 584, 721, 796, 1219
Hin1I GRCGYC 2 cut(s) 93, 405
Hin6I GCGC 5 cut(s) 210, 582, 719, 794, 1217
HinP1I GCGC 5 cut(s) 210, 582, 719, 794, 1217
HindIII AAGCTT 2 cut(s) 318, 1232
HinfI GANTC 6 cut(s) 236, 566, 743, 766, 957, 1283
HpaII CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
HphI GGTGA 6 cut(s) 157, 364, 460, 1240, 1699, 1744
Hpy166II GTNNAC 3 cut(s) 533, 705, 1076
Hpy188III TCNNGA 6 cut(s) 1546, 1592, 1628, 1785, 1805, 1839
Hpy8I GTNNAC 3 cut(s) 533, 705, 1076
Hpy99I CGWCG 3 cut(s) 95, 98, 410
HpyAV CCTTC 4 cut(s) 229, 532, 1735, 1760
HpyCH4III ACNGT 5 cut(s) 87, 277, 506, 1458, 1766
HpyCH4IV ACGT 2 cut(s) 93, 1072
HpyCH4V TGCA 8 cut(s) 4, 308, 533, 649, 910, 1101, 1279, 1316
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
HpyF3I CTNAG 3 cut(s) 157, 294, 1080
HpySE526I ACGT 2 cut(s) 93, 1072
Hsp92I GRCGYC 2 cut(s) 93, 405
HspAI GCGC 5 cut(s) 210, 582, 719, 794, 1217
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 1200
KspI CCGCGG 1 cut(s) 919
Kzo9I GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
LmnI GCTCC 3 cut(s) 579, 781, 1392
Lsp1109I GCAGC 2 cut(s) 53, 497
LweI GCATC 5 cut(s) 247, 613, 636, 1254, 1678
MaeI CTAG 3 cut(s) 618, 1350, 1409
MaeII ACGT 2 cut(s) 93, 1072
MalI GATC 8 cut(s) 116, 590, 1085, 1202, 1385, 1626, 1789, 1803
MbiI CCGCTC 1 cut(s) 861
MboI GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
MboII GAAGA 9 cut(s) 207, 259, 1348, 1510, 1516, 1635, 1705, 1708, 1711
MfeI CAATTG 1 cut(s) 870
MflI RGATCY 3 cut(s) 114, 1383, 1787
MhlI GDGCHC 5 cut(s) 165, 535, 1230, 1397, 1681
MluCI AATT 9 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427, 1617
MlyI GAGTC 4 cut(s) 560, 752, 966, 1292
MmeI TCCRAC 4 cut(s) 106, 213, 1329, 1696
Mph1103I ATGCAT 2 cut(s) 912, 1281
MroNI GCCGGC 1 cut(s) 401
MroXI GAANNNNTTC 1 cut(s) 542
MseI TTAA 3 cut(s) 42, 345, 1259
MslI CAYNNNNRTG 3 cut(s) 803, 1674, 1733
MspA1I CMGCKG 1 cut(s) 918
MspI CCGG 6 cut(s) 233, 300, 402, 668, 971, 1017
MspR9I CCNGG 3 cut(s) 1018, 1389, 1674
MunI CAATTG 1 cut(s) 870
MvaI CCWGG 2 cut(s) 1389, 1674
MvnI CGCG 3 cut(s) 210, 584, 918
MwoI GCNNNNNNNGC 4 cut(s) 182, 1171, 1214, 1225
NaeI GCCGGC 1 cut(s) 403
NciI CCSGG 1 cut(s) 1018
NcoI CCATGG 1 cut(s) 489
NdeI CATATG 1 cut(s) 498
NdeII GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
NgoMIV GCCGGC 1 cut(s) 401
NlaIV GGNNCC 1 cut(s) 969
NmeAIII GCCGAG 1 cut(s) 1145
NsbI TGCGCA 1 cut(s) 1218
NsiI ATGCAT 2 cut(s) 912, 1281
NspI RCATGY 2 cut(s) 808, 1133
PagI TCATGA 1 cut(s) 1591
PasI CCCWGGG 1 cut(s) 1388
PceI AGGCCT 1 cut(s) 395
PciI ACATGT 2 cut(s) 804, 1129
PcsI WCGNNNNNNNCGW 2 cut(s) 462, 581
PdiI GCCGGC 1 cut(s) 403
PdmI GAANNNNTTC 1 cut(s) 542
PfeI GAWTC 2 cut(s) 236, 766
PinAI ACCGGT 1 cut(s) 299
PkrI GCNGC 3 cut(s) 68, 512, 917
PleI GAGTC 4 cut(s) 560, 751, 965, 1291
PpsI GAGTC 4 cut(s) 560, 751, 965, 1291
PscI ACATGT 2 cut(s) 804, 1129
Psp124BI GAGCTC 1 cut(s) 1230
Psp6I CCWGG 2 cut(s) 1387, 1672
PspGI CCWGG 2 cut(s) 1387, 1672
PspN4I GGNNCC 1 cut(s) 969
PspPI GGNCC 2 cut(s) 139, 968
PsuI RGATCY 3 cut(s) 114, 1383, 1787
RsaI GTAC 4 cut(s) 503, 706, 1043, 1077
RsaNI GTAC 4 cut(s) 502, 705, 1042, 1076
RseI CAYNNNNRTG 3 cut(s) 803, 1674, 1733
SacI GAGCTC 1 cut(s) 1230
SacII CCGCGG 1 cut(s) 919
SaqAI TTAA 3 cut(s) 42, 345, 1259
SatI GCNGC 3 cut(s) 67, 511, 916
Sau3AI GATC 8 cut(s) 114, 588, 1083, 1200, 1383, 1624, 1787, 1801
Sau96I GGNCC 2 cut(s) 139, 968
SchI GAGTC 4 cut(s) 560, 752, 966, 1292
ScrFI CCNGG 3 cut(s) 1018, 1389, 1674
SduI GDGCHC 5 cut(s) 165, 535, 1230, 1397, 1681
SfaNI GCATC 5 cut(s) 247, 613, 636, 1254, 1678
SfcI CTRYAG 1 cut(s) 1660
Sfr303I CCGCGG 1 cut(s) 919
SgrBI CCGCGG 1 cut(s) 919
SinI GGWCC 1 cut(s) 968
SmiMI CAYNNNNRTG 3 cut(s) 803, 1674, 1733
SmlI CTYRAG 4 cut(s) 194, 389, 722, 1229
SmoI CTYRAG 4 cut(s) 194, 389, 722, 1229
Sse9I AATT 9 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427, 1617
SseBI AGGCCT 1 cut(s) 395
SsiI CCGC 8 cut(s) 183, 208, 513, 626, 656, 861, 916, 918
SspI AATATT 1 cut(s) 8
SspMI CTAG 3 cut(s) 618, 1350, 1409
SstI GAGCTC 1 cut(s) 1230
StuI AGGCCT 1 cut(s) 395
StyD4I CCNGG 3 cut(s) 1016, 1387, 1672
StyI CCWWGG 3 cut(s) 489, 1251, 1813
TaaI ACNGT 5 cut(s) 87, 277, 506, 1458, 1766
TaiI ACGT 2 cut(s) 96, 1075
TaqI TCGA 5 cut(s) 546, 1026, 1086, 1286, 1571
TasI AATT 9 cut(s) 134, 368, 418, 452, 870, 1064, 1419, 1427, 1617
TatI WGTACW 1 cut(s) 501
TauI GCSGC 1 cut(s) 918
TfiI GAWTC 2 cut(s) 236, 766
Tru1I TTAA 3 cut(s) 42, 345, 1259
Tru9I TTAA 3 cut(s) 42, 345, 1259
TscAI CASTG 2 cut(s) 1210, 1769
TseI GCWGC 2 cut(s) 66, 510
TspGWI ACGGA 1 cut(s) 550
TspRI CASTG 2 cut(s) 1210, 1769
VneI GTGCAC 1 cut(s) 531
VpaK11BI GGWCC 1 cut(s) 968
XagI CCTNNNNNAGG 1 cut(s) 1817
XapI RAATTY 6 cut(s) 368, 418, 452, 1064, 1419, 1427
XceI RCATGY 2 cut(s) 808, 1133
XmnI GAANNNNTTC 1 cut(s) 542
XspI CTAG 3 cut(s) 618, 1350, 1409
ZraI GACGTC 1 cut(s) 94
Zsp2I ATGCAT 2 cut(s) 912, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.