Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010099.1

Orthogroup ID

OG0006671

Physical Location & Seq

Genomic Coordinates Reverse (-)

40833 .. 51272

Gene Structure 10440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010099.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

atgcaatatttccaaaccctgaagaggagcaagctcatcattaacagcagagaagcagagcagagctgcttggctctactccaactgtgcgacgtcgttccgaagctgacgcaaatccaagcccacattgtcaaattgggcctccgaaacaaccccttagtgctgacaaagttcgcctccaccgcctccgacctcaaggccattgaccacgcctcttccttcctgttctcgccggattccgatacccatttatacgatgtgtttctcttcaacaccatcatcagggcttacgctcagaccagtcatgcaaagcataaagctttgtgcttttacagagttatggttaaaggtgaagtcttacctaataaattcacctacccttttgttctcaaggcctgtgccggagttggggacttgaatttggggaagtcggttcatgggtcggtggtgaaattcgggtttggtgatgatatccatgttcggaacaccatggttcatatgtattgttgctgcggtggagggattgaaagtgcacgcaaggtgtttgatgaaatgcctaactgggactctgtttcgtggagcgcgatgattggagggtatgtgagggtggggtggtctagtgatgcggtggagttgtttagggagatgcagatggcgggagtgaggccggacgagattactatggtttcggttttgtctgcgtgtaccgatttgggtgcgcttgagcttggcaagtgggtggagtcctatattgagaaagaggggattcagaaaagtgtggagctttgtaatgcgctcattgacatgtttgcgaaatgtggcaatgttgataaggctttgaagttgtttaggggcatgagtgggagaacaattgtttcttggacttctgtgattgatggtttggcaatgcatggccgcggagaagaggccgtttctttgtttgaggaaatgattggagtcggggtggaaccggatgatgttgcgtttataggactgctttcggcttgtagtcattccgggttggtcgataagggaaagaggtacttcagttcaatgatggaaaaatttggacgtgtacctaagatcgaacactatgggtgcatggtggatatgttatgccgagctggacatgtcaaggaggcattggagtttattcggaaaatgcctattcagccaaatccaatagttttgcgaaccctgatcagtgcttgccgtgtgcatggtgagctcaagcttggagagagcatcaccaaggagttaatcagggctgaacctatgcatgagtcgaactatgtcctgctttccaacatctatgcaaaaatgaaccattgggagaagaaaaccaagactagagaggcgatggacaagaaagggatgaaaaagatccctgggagcactatgattgagcaagataatgaaatttacgaatttgtggcaggggataaatcgcataaacagtccaaagagatttatgaaatggttgatgaaatggggaggaagatgaagacggctggatatgttcccactacatcagaggttttgctagacattgatgaagaagataaagaagatgctttaaataggcatagtgaaaagttggccattgctttcgccctcctgaacacgccaccaggaactcctattcgcatggtaaagaatctgcgggtttgtgatgattgccactctgctactaagtacatctctaagatttataatcgagaaatagtggtgagggaccgaaacaggtttcaccatttcaagggtggcactcggggtcagagagcgaggcaggggaacacggggtcagagactgaggtcggggactcggggtcagattggaggcggctccagtcggcttgggtcggagaaggaggtcgggacttgacgaacttcagcttggagaatgatgaggtcgacaaggtgagctgcgaagtcattagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

647

Amino Acids

72.44

Weight (kDa)

7.04

Isoelectric Point (pI)

37.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31920
fragaria_vesca	FvH4_2g29361 FvH4_5g23310
malus_domestica	MD08G1148200.v1.1
prunus_persica	Prupe.1G479200_v2.0.a1 Prupe.5G026200_v2.0.a1
pyrus_communis	pycom08g12480
rosa_chinensis	RchiOBHm_Chr6g0298171 RchiOBHm_Chr7g0212261
rosa_laevigata	RLG00000002902 RLG00000011529
rosa_multiflora	Rmu_co8497291.1_g000001 Rmu_sc0001911.1_g000044 Rmu_sc0002882.1_g000068 Rmu_sc0007429.1_g000004 Rmu_sc0010099.1_g000013 Rmu_sc0022064.1_g000003
rosa_roxburghii	Rroxscaffold_3G00246970
rosa_rugosa	Rorug06G0279100 Rorug07G0132900
rosa_samantha	Rh6AG389400 Rh6DG390300 Rh7BG259900
rosa_wichuraiana	Rw0G010650 Rw6G034000 Rw7G022750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AatII	GACGTC	1 cut(s)	96
AccI	GTMKAC	1 cut(s)	1914
AccII	CGCG	2 cut(s)	584, 918
AciI	CCGC	8 cut(s)	183, 513, 626, 656, 916, 918, 1663, 1843
AclWI	GGATC	1 cut(s)	1378
AcoI	YGGCCR	2 cut(s)	913, 1599
AcsI	RAATTY	6 cut(s)	368, 418, 452, 1064, 1419, 1427
AcuI	CTGAAG	3 cut(s)	41, 1030, 1876
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	4 cut(s)	706, 1043, 1077, 1697
AfiI	CCNNNNNNNGG	4 cut(s)	24, 282, 408, 1759
AflIII	ACRYGT	3 cut(s)	804, 1072, 1129
AgsI	TTSAA	6 cut(s)	271, 418, 527, 841, 1053, 1759
AhdI	GACNNNNNGTC	1 cut(s)	1828
AjiI	CACGTC	1 cut(s)	1073
AjnI	CCWGG	2 cut(s)	1387, 1630
AjuI	GAANNNNNNNTTGG	2 cut(s)	1880, 1912
Alw21I	GWGCWC	3 cut(s)	535, 1230, 1397
Alw26I	GTCTC	1 cut(s)	1802
Alw44I	GTGCAC	1 cut(s)	531
AlwI	GGATC	1 cut(s)	1378
AlwNI	CAGNNNCTG	1 cut(s)	1811
Ama87I	CYCGRG	2 cut(s)	1770, 1825
AoxI	GGCC	7 cut(s)	139, 198, 393, 665, 913, 927, 1599
ApaLI	GTGCAC	1 cut(s)	531
ApeKI	GCWGC	3 cut(s)	66, 510, 1926
ApoI	RAATTY	6 cut(s)	368, 418, 452, 1064, 1419, 1427
AspLEI	GCGC	3 cut(s)	584, 721, 796
AspS9I	GGNCC	2 cut(s)	139, 1735
AsuC2I	CCSGG	1 cut(s)	1018
AsuHPI	GGTGA	9 cut(s)	362, 364, 460, 476, 1235, 1240, 1741, 1742, 1933
AvaI	CYCGRG	2 cut(s)	1770, 1825
AvaII	GGWCC	1 cut(s)	1735
BaeGI	GKGCMC	1 cut(s)	535
BaeI	ACNNNNGTAYC	2 cut(s)	1033, 1066
BalI	TGGCCA	1 cut(s)	1601
BanII	GRGCYC	1 cut(s)	1230
BbsI	GAAGAC	1 cut(s)	1511
Bbv12I	GWGCWC	3 cut(s)	535, 1230, 1397
BbvI	GCAGC	3 cut(s)	53, 497, 1913
BccI	CCATC	5 cut(s)	284, 646, 890, 1051, 1354
BceAI	ACGGC	3 cut(s)	914, 1197, 1524
BcgI	CGANNNNNNTGC	2 cut(s)	698, 732
BciT130I	CCWGG	2 cut(s)	1389, 1632
BclI	TGATCA	1 cut(s)	1200
BcnI	CCSGG	1 cut(s)	1018
BcoDI	GTCTC	1 cut(s)	1802
BfaI	CTAG	4 cut(s)	618, 1350, 1544, 1942
BisI	GCNGC	5 cut(s)	67, 511, 916, 1844, 1927
BlsI	GCNGC	5 cut(s)	68, 512, 917, 1845, 1928
Bme1390I	CCNGG	3 cut(s)	1018, 1389, 1632
Bme18I	GGWCC	1 cut(s)	1735
BmeRI	GACNNNNNGTC	1 cut(s)	1828
BmeT110I	CYCGRG	2 cut(s)	1770, 1825
BmgBI	CACGTC	1 cut(s)	1073
BmgT120I	GGNCC	2 cut(s)	139, 1735
BmiI	GGNNCC	3 cut(s)	969, 1736, 1847
BmrFI	CCNGG	3 cut(s)	1018, 1389, 1632
BmrI	ACTGGG	1 cut(s)	571
BmsI	GCATC	4 cut(s)	613, 636, 1254, 1561
BmuI	ACTGGG	1 cut(s)	571
BoxI	GACNNNNGTC	1 cut(s)	1814
BpiI	GAAGAC	1 cut(s)	1511
BpmI	CTGGAG	1 cut(s)	1832
BpuEI	CTTGAG	4 cut(s)	179, 374, 743, 1214
BpuMI	CCSGG	1 cut(s)	1018
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	5 cut(s)	489, 916, 1251, 1387, 1388
BsaWI	WCCGGW	1 cut(s)	970
BsaXI	ACNNNNNCTCC	4 cut(s)	585, 615, 948, 978
Bsc4I	CCNNNNNNNGG	4 cut(s)	24, 282, 408, 1759
Bse1I	ACTGG	3 cut(s)	300, 566, 1849
Bse3DI	GCAATG	3 cut(s)	829, 912, 1602
BseBI	CCWGG	2 cut(s)	1389, 1632
BseDI	CCNNGG	5 cut(s)	489, 916, 1251, 1387, 1388
BseGI	GGATG	2 cut(s)	979, 1380
BseLI	CCNNNNNNNGG	4 cut(s)	24, 282, 408, 1759
BseMI	GCAATG	3 cut(s)	829, 912, 1602
BseMII	CTCAG	2 cut(s)	308, 1803
BseNI	ACTGG	3 cut(s)	300, 566, 1849
BseRI	GAGGAG	1 cut(s)	40
BseSI	GKGCMC	1 cut(s)	535
BseXI	GCAGC	3 cut(s)	53, 497, 1913
Bsh1236I	CGCG	2 cut(s)	584, 918
BshFI	GGCC	7 cut(s)	141, 200, 395, 667, 915, 929, 1601
BsiHKAI	GWGCWC	3 cut(s)	535, 1230, 1397
BsiHKCI	CYCGRG	2 cut(s)	1770, 1825
BsiSI	CCGG	5 cut(s)	233, 402, 668, 971, 1017
BslFI	GGGAC	5 cut(s)	425, 578, 1748, 1835, 1892
BslI	CCNNNNNNNGG	4 cut(s)	24, 282, 408, 1759
BsmAI	GTCTC	1 cut(s)	1802
BsmFI	GGGAC	5 cut(s)	425, 578, 1748, 1835, 1892
BsnI	GGCC	7 cut(s)	141, 200, 395, 667, 915, 929, 1601
BsoBI	CYCGRG	2 cut(s)	1770, 1825
Bsp1286I	GDGCHC	3 cut(s)	535, 1230, 1397
Bsp143I	GATC	3 cut(s)	1083, 1200, 1383
Bsp19I	CCATGG	1 cut(s)	489
BspACI	CCGC	8 cut(s)	183, 513, 626, 656, 916, 918, 1663, 1843
BspANI	GGCC	7 cut(s)	141, 200, 395, 667, 915, 929, 1601
BspCNI	CTCAG	2 cut(s)	307, 1804
BspFNI	CGCG	2 cut(s)	584, 918
BspLI	GGNNCC	3 cut(s)	969, 1736, 1847
BspPI	GGATC	1 cut(s)	1378
BsrDI	GCAATG	3 cut(s)	829, 912, 1602
BsrI	ACTGG	3 cut(s)	300, 566, 1849
BssECI	CCNNGG	5 cut(s)	489, 916, 1251, 1387, 1388
BssMI	GATC	3 cut(s)	1083, 1200, 1383
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	2 cut(s)	489, 1251
Bst2UI	CCWGG	2 cut(s)	1389, 1632
Bst4CI	ACNGT	2 cut(s)	87, 1458
Bst6I	CTCTTC	4 cut(s)	17, 220, 272, 918
BstACI	GRCGYC	1 cut(s)	93
BstC8I	GCNNGC	3 cut(s)	32, 535, 1210
BstDEI	CTNAG	6 cut(s)	157, 294, 1080, 1692, 1704, 1812
BstDSI	CCRYGG	2 cut(s)	489, 916
BstF5I	GGATG	2 cut(s)	979, 1380
BstFNI	CGCG	2 cut(s)	584, 918
BstHHI	GCGC	3 cut(s)	584, 721, 796
BstKTI	GATC	3 cut(s)	1086, 1203, 1386
BstMAI	GTCTC	1 cut(s)	1802
BstMBI	GATC	3 cut(s)	1083, 1200, 1383
BstMWI	GCNNNNNNNGC	3 cut(s)	182, 1171, 1225
BstNI	CCWGG	2 cut(s)	1389, 1632
BstNSI	RCATGY	2 cut(s)	808, 1133
BstPAI	GACNNNNGTC	1 cut(s)	1814
BstSCI	CCNGG	3 cut(s)	1016, 1387, 1630
BstSLI	GKGCMC	1 cut(s)	535
BstUI	CGCG	2 cut(s)	584, 918
BstV1I	GCAGC	3 cut(s)	53, 497, 1913
BstV2I	GAAGAC	1 cut(s)	1511
BstX2I	RGATCY	1 cut(s)	1383
BstYI	RGATCY	1 cut(s)	1383
BsuRI	GGCC	7 cut(s)	141, 200, 395, 667, 915, 929, 1601
BtgI	CCRYGG	2 cut(s)	489, 916
BtgZI	GCGATG	2 cut(s)	599, 1373
BtrI	CACGTC	1 cut(s)	1073
BtsCI	GGATG	2 cut(s)	979, 1380
BtsIMutI	CAGTG	1 cut(s)	1210
Cac8I	GCNNGC	3 cut(s)	32, 535, 1210
CaiI	CAGNNNCTG	1 cut(s)	1811
CfoI	GCGC	3 cut(s)	584, 721, 796
Cfr13I	GGNCC	2 cut(s)	139, 1735
Cfr42I	CCGCGG	1 cut(s)	919
CseI	GACGC	1 cut(s)	118
Csp6I	GTAC	4 cut(s)	705, 1042, 1076, 1696
CviQI	GTAC	4 cut(s)	705, 1042, 1076, 1696
DdeI	CTNAG	6 cut(s)	157, 294, 1080, 1692, 1704, 1812
DpnI	GATC	3 cut(s)	1085, 1202, 1385
DpnII	GATC	3 cut(s)	1083, 1200, 1383
DraI	TTTAAA	1 cut(s)	1578
DriI	GACNNNNNGTC	1 cut(s)	1828
EaeI	YGGCCR	2 cut(s)	913, 1599
Eam1104I	CTCTTC	4 cut(s)	17, 220, 272, 918
Eam1105I	GACNNNNNGTC	1 cut(s)	1828
EarI	CTCTTC	4 cut(s)	17, 220, 272, 918
Ecl136II	GAGCTC	1 cut(s)	1228
Eco130I	CCWWGG	2 cut(s)	489, 1251
Eco147I	AGGCCT	1 cut(s)	395
Eco24I	GRGCYC	1 cut(s)	1230
Eco32I	GATATC	1 cut(s)	472
Eco47I	GGWCC	1 cut(s)	1735
Eco53kI	GAGCTC	1 cut(s)	1228
Eco57I	CTGAAG	3 cut(s)	41, 1030, 1876
Eco88I	CYCGRG	2 cut(s)	1770, 1825
EcoICRI	GAGCTC	1 cut(s)	1228
EcoRII	CCWGG	2 cut(s)	1387, 1630
EcoRV	GATATC	1 cut(s)	472
EcoT14I	CCWWGG	2 cut(s)	489, 1251
EcoT22I	ATGCAT	2 cut(s)	912, 1281
EcoT38I	GRGCYC	1 cut(s)	1230
ErhI	CCWWGG	2 cut(s)	489, 1251
FalI	AAGNNNNNCTT	2 cut(s)	1028, 1060
FaqI	GGGAC	5 cut(s)	425, 578, 1748, 1835, 1892
FauI	CCCGC	2 cut(s)	649, 1656
FauNDI	CATATG	1 cut(s)	498
FbaI	TGATCA	1 cut(s)	1200
FblI	GTMKAC	1 cut(s)	1914
Fnu4HI	GCNGC	5 cut(s)	67, 511, 916, 1844, 1927
FokI	GGATG	2 cut(s)	986, 1387
FriOI	GRGCYC	1 cut(s)	1230
Fsp4HI	GCNGC	5 cut(s)	67, 511, 916, 1844, 1927
FspBI	CTAG	4 cut(s)	618, 1350, 1544, 1942
GlaI	GCGC	3 cut(s)	583, 720, 795
GluI	GCNGC	5 cut(s)	67, 511, 916, 1844, 1927
GsuI	CTGGAG	1 cut(s)	1832
HaeIII	GGCC	7 cut(s)	141, 200, 395, 667, 915, 929, 1601
HapII	CCGG	5 cut(s)	233, 402, 668, 971, 1017
HgaI	GACGC	1 cut(s)	118
HhaI	GCGC	3 cut(s)	584, 721, 796
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	3 cut(s)	582, 719, 794
HinP1I	GCGC	3 cut(s)	582, 719, 794
HincII	GTYRAC	1 cut(s)	1915
HindII	GTYRAC	1 cut(s)	1915
HindIII	AAGCTT	2 cut(s)	318, 1232
HinfI	GANTC	8 cut(s)	236, 566, 743, 766, 957, 1283, 1657, 1823
HpaII	CCGG	5 cut(s)	233, 402, 668, 971, 1017
HphI	GGTGA	9 cut(s)	362, 364, 460, 476, 1235, 1240, 1741, 1742, 1933
Hpy166II	GTNNAC	4 cut(s)	533, 705, 1076, 1915
Hpy188III	TCNNGA	3 cut(s)	1618, 1718, 1877
Hpy8I	GTNNAC	4 cut(s)	533, 705, 1076, 1915
Hpy99I	CGWCG	2 cut(s)	95, 98
HpyAV	CCTTC	2 cut(s)	229, 1862
HpyCH4III	ACNGT	2 cut(s)	87, 1458
HpyCH4IV	ACGT	2 cut(s)	93, 1072
HpyCH4V	TGCA	9 cut(s)	4, 308, 533, 649, 910, 1101, 1219, 1279, 1316
HpyF10VI	GCNNNNNNNGC	3 cut(s)	182, 1171, 1225
HpyF3I	CTNAG	6 cut(s)	157, 294, 1080, 1692, 1704, 1812
HpySE526I	ACGT	2 cut(s)	93, 1072
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	3 cut(s)	582, 719, 794
Ksp22I	TGATCA	1 cut(s)	1200
KspI	CCGCGG	1 cut(s)	919
Kzo9I	GATC	3 cut(s)	1083, 1200, 1383
LmnI	GCTCC	5 cut(s)	27, 579, 781, 1392, 1851
Lsp1109I	GCAGC	3 cut(s)	53, 497, 1913
LweI	GCATC	4 cut(s)	613, 636, 1254, 1561
MaeI	CTAG	4 cut(s)	618, 1350, 1544, 1942
MaeII	ACGT	2 cut(s)	93, 1072
MalI	GATC	3 cut(s)	1085, 1202, 1385
MboI	GATC	3 cut(s)	1083, 1200, 1383
MfeI	CAATTG	1 cut(s)	870
MflI	RGATCY	1 cut(s)	1383
MhlI	GDGCHC	3 cut(s)	535, 1230, 1397
MlsI	TGGCCA	1 cut(s)	1601
MluCI	AATT	8 cut(s)	134, 368, 418, 452, 870, 1064, 1419, 1427
MluNI	TGGCCA	1 cut(s)	1601
MlyI	GAGTC	5 cut(s)	560, 752, 966, 1292, 1817
MmeI	TCCRAC	4 cut(s)	106, 213, 1329, 1843
Mox20I	TGGCCA	1 cut(s)	1601
Mph1103I	ATGCAT	2 cut(s)	912, 1281
MscI	TGGCCA	1 cut(s)	1601
MseI	TTAA	4 cut(s)	42, 345, 1259, 1577
MslI	CAYNNNNRTG	1 cut(s)	803
Msp20I	TGGCCA	1 cut(s)	1601
MspA1I	CMGCKG	1 cut(s)	918
MspI	CCGG	5 cut(s)	233, 402, 668, 971, 1017
MspR9I	CCNGG	3 cut(s)	1018, 1389, 1632
MunI	CAATTG	1 cut(s)	870
MvaI	CCWGG	2 cut(s)	1389, 1632
MvnI	CGCG	2 cut(s)	584, 918
MwoI	GCNNNNNNNGC	3 cut(s)	182, 1171, 1225
NciI	CCSGG	1 cut(s)	1018
NcoI	CCATGG	1 cut(s)	489
NdeI	CATATG	1 cut(s)	498
NdeII	GATC	3 cut(s)	1083, 1200, 1383
NlaIV	GGNNCC	3 cut(s)	969, 1736, 1847
NmeAIII	GCCGAG	1 cut(s)	1145
NsiI	ATGCAT	2 cut(s)	912, 1281
NspI	RCATGY	2 cut(s)	808, 1133
PasI	CCCWGGG	1 cut(s)	1388
PceI	AGGCCT	1 cut(s)	395
PciI	ACATGT	2 cut(s)	804, 1129
PcsI	WCGNNNNNNNCGW	1 cut(s)	581
PfeI	GAWTC	3 cut(s)	236, 766, 1657
PkrI	GCNGC	5 cut(s)	68, 512, 917, 1845, 1928
PleI	GAGTC	5 cut(s)	560, 751, 965, 1291, 1817
PpsI	GAGTC	5 cut(s)	560, 751, 965, 1291, 1817
PscI	ACATGT	2 cut(s)	804, 1129
PshAI	GACNNNNGTC	1 cut(s)	1814
PsiI	TTATAA	1 cut(s)	1713
Psp124BI	GAGCTC	1 cut(s)	1230
Psp6I	CCWGG	2 cut(s)	1387, 1630
PspGI	CCWGG	2 cut(s)	1387, 1630
PspN4I	GGNNCC	3 cut(s)	969, 1736, 1847
PspPI	GGNCC	2 cut(s)	139, 1735
PstNI	CAGNNNCTG	1 cut(s)	1811
PsuI	RGATCY	1 cut(s)	1383
RsaI	GTAC	4 cut(s)	706, 1043, 1077, 1697
RsaNI	GTAC	4 cut(s)	705, 1042, 1076, 1696
RseI	CAYNNNNRTG	1 cut(s)	803
SacI	GAGCTC	1 cut(s)	1230
SacII	CCGCGG	1 cut(s)	919
SalI	GTCGAC	1 cut(s)	1913
SaqAI	TTAA	4 cut(s)	42, 345, 1259, 1577
SatI	GCNGC	5 cut(s)	67, 511, 916, 1844, 1927
Sau3AI	GATC	3 cut(s)	1083, 1200, 1383
Sau96I	GGNCC	2 cut(s)	139, 1735
SchI	GAGTC	5 cut(s)	560, 752, 966, 1292, 1817
ScrFI	CCNGG	3 cut(s)	1018, 1389, 1632
SduI	GDGCHC	3 cut(s)	535, 1230, 1397
SfaNI	GCATC	4 cut(s)	613, 636, 1254, 1561
Sfr303I	CCGCGG	1 cut(s)	919
SgrBI	CCGCGG	1 cut(s)	919
SinI	GGWCC	1 cut(s)	1735
SmiMI	CAYNNNNRTG	1 cut(s)	803
SmlI	CTYRAG	4 cut(s)	194, 389, 722, 1229
SmoI	CTYRAG	4 cut(s)	194, 389, 722, 1229
Sse9I	AATT	8 cut(s)	134, 368, 418, 452, 870, 1064, 1419, 1427
SseBI	AGGCCT	1 cut(s)	395
SsiI	CCGC	8 cut(s)	183, 513, 626, 656, 916, 918, 1663, 1843
SspI	AATATT	1 cut(s)	8
SspMI	CTAG	4 cut(s)	618, 1350, 1544, 1942
SstI	GAGCTC	1 cut(s)	1230
StuI	AGGCCT	1 cut(s)	395
StyD4I	CCNGG	3 cut(s)	1016, 1387, 1630
StyI	CCWWGG	2 cut(s)	489, 1251
TaaI	ACNGT	2 cut(s)	87, 1458
TaiI	ACGT	2 cut(s)	96, 1075
TaqI	TCGA	5 cut(s)	1026, 1086, 1286, 1717, 1914
TaqII	GACCGA	1 cut(s)	1752
TasI	AATT	8 cut(s)	134, 368, 418, 452, 870, 1064, 1419, 1427
TatI	WGTACW	1 cut(s)	1695
TauI	GCSGC	2 cut(s)	918, 1846
TfiI	GAWTC	3 cut(s)	236, 766, 1657
Tru1I	TTAA	4 cut(s)	42, 345, 1259, 1577
Tru9I	TTAA	4 cut(s)	42, 345, 1259, 1577
TscAI	CASTG	1 cut(s)	1210
TseI	GCWGC	3 cut(s)	66, 510, 1926
TspRI	CASTG	1 cut(s)	1210
VneI	GTGCAC	1 cut(s)	531
VpaK11BI	GGWCC	1 cut(s)	1735
XapI	RAATTY	6 cut(s)	368, 418, 452, 1064, 1419, 1427
XceI	RCATGY	2 cut(s)	808, 1133
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1760
XmiI	GTMKAC	1 cut(s)	1914
XspI	CTAG	4 cut(s)	618, 1350, 1544, 1942
ZraI	GACGTC	1 cut(s)	94
Zsp2I	ATGCAT	2 cut(s)	912, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.