FvH4_2g32320

Clathrin interactor EPSIN

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
24527649 .. 24532383
4735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g32320.t1

Sequence Viewer

Length: 1734 bp
ATGGATTTCATGAAGGTCTTCGATCAAACTGTCCGGGAAATTAAGAGGGAGGTGAATCTTAAGGTCTTGAAGGTTCCGGAGATGGAACAGAAGGTACTGGACGCAACGGATAATGAGCCTTGGGGCCCGCATGGCTCTGCATTGGTGGAGATCGCACAAGCCACTAAAAAATTTTCGGAATGTCAGATGGTTATGAATGTTTTATGGACAAGATTGGGTGAGACAGGCAAGGACTGGCGTTATGTCTATAAGTCGTTGGCTGTCATAGAGTATCTGGTGTCACATGGATCGGAGCGTGCTGTTGATGATATTATAGAACACACTTTCCAAATCTCATCACTCTCAACTTTTGAATATGTTGAGCCAAGTGGGAAGGATTTGGGGATAAATGTGAGGAAGAAGGCTGAAAACATTGTGGCCCTTTTGAATAACAAAGATAAAATACAGGAAATTAGAAACAAAGCTGCTGCAAACCGGGACAAGTACGTTGGACTTTCTTCTACTGGGATTTCATACAAGTCAGGTTCAGCCACTTCGTCCTCGTTTAGTGGTGGCAGTTATGGAGGTTCAAGTGCTGTTGGATCTGGCGATAGGTTCAGGGATAGCTATAAGGACAGAGATCAATATGATGAAGACAAGTTTGAGAAGAAAAGCTCAAGTAGGTCACGCCGTGGGGTTACAAGTGAGAATCGAGAGAGCTCCTCAAAGAAGGGATATGGCAGCAGGAAGGATCAGGATAATATTTCATCCAGTGTGAAAAAATCATCATATAAGACAAATGACCGTGAAAATTACAGTTCAAATCCGAGTCAGACGGCAAGTGTACTTTCTGATGATTATGAGGACGATTTTGATCCACGAGGAACTTCTACTACTAAGGCTGCTTCCGGAAGCTCAAACCAAGTGGATCTTTTTGGACATAGTTTGATTGGTGATCTCATGGATGCTCCAGCATCTGTTCCTGAAGAGGAGCCTGGCATGAATAGTGGTTCAGCAGAGGTTGATCTGTTTGCGGATGCAGCTTTCATATCAGCACCACCACAGGCAGAAACTGATTCATTTGCAGACGCAACTTTTGTATCAGCACCACCCCAGAAAGCAACTGGAGCAAGTTCTCAAACTCAGAATGGTTTTGATCTATTTGCTTCCCAACCAACCATTTCTCAGTCAGCTTCTTCACCAATTGACCTCTTTGCGTCCCCTGTCCCGGTTATGCAGCCAGAAACAAAGTCCACAAGTCCAGCACCAATGAACACCAACATTGTTGATCCCTTTGCTGCTGTTCCAATGAACAGTTTTGATGGATCTGATTTCTTGGGGGGATTCACCTCTAACTCTGGTTCAACATTTTCAGAACCTTCTCAAATTTCTGGCAATGCTGCCAGCCACAGTAGTTTGGATAGGAAATCTTCAGCCGACTCAAAGACACCACCCAAGAAGGATAGTTTACAGGTGAAATCTGGCATTTGGGCCGATTCACTTAGCCGTGGACTGATTGATCTTAATATAACTGGCCCCAAGAAGGTGAATCTGGCGGATGTGGGGATTGTGGGTGGATTGACTGACGGAGCAGATGAAAGGGAGAAAGGCCCCCCAACTTCATTTAACATGGGTAGAGCAATGGGATCAGGGATGGGCCTCGGAAAGTCTGGATATCAGGGAGCTGGAGATGATGACTTCTTCTCGAGTCTCAGTAGCGGTCAACAATACTCATATGGTGGTTTCCAAAAGTAG

Protein Analysis

578

Amino Acids

61.86

Weight (kDa)

5.04

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 27 - 147 6.3e-42 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 2 cut(s) 76, 887
AciI CCGC 4 cut(s) 128, 1013, 1535, 1698
AclWI GGATC 8 cut(s) 295, 589, 738, 848, 915, 1262, 1312, 1633
AcsI RAATTY 2 cut(s) 170, 1365
AcuI CTGAAG 2 cut(s) 984, 1395
AdeI CACNNNGTG 1 cut(s) 671
AfaI GTAC 3 cut(s) 96, 485, 825
AfiI CCNNNNNNNGG 2 cut(s) 1207, 1522
AflII CTTAAG 1 cut(s) 59
AgsI TTSAA 6 cut(s) 70, 353, 427, 570, 801, 1344
AjnI CCWGG 1 cut(s) 973
AloI GAACNNNNNNTCC 2 cut(s) 309, 341
AluBI AGCT 8 cut(s) 464, 606, 654, 699, 894, 1022, 1172, 1664
AluI AGCT 8 cut(s) 464, 606, 654, 699, 894, 1022, 1172, 1664
Alw21I GWGCWC 1 cut(s) 701
Alw26I GTCTC 2 cut(s) 215, 1694
AlwI GGATC 8 cut(s) 295, 589, 738, 848, 915, 1262, 1312, 1633
AlwNI CAGNNNCTG 2 cut(s) 956, 1052
Ama87I CYCGRG 1 cut(s) 1684
Aor13HI TCCGGA 2 cut(s) 76, 887
AoxI GGCC 6 cut(s) 124, 417, 1470, 1513, 1588, 1636
ApaI GGGCCC 1 cut(s) 128
ApeKI GCWGC 8 cut(s) 464, 467, 720, 881, 1019, 1216, 1277, 1379
ApoI RAATTY 2 cut(s) 170, 1365
ArsI GACNNNNNNTTYG 2 cut(s) 1058, 1090
Asp700I GAANNNNTTC 1 cut(s) 17
AspS9I GGNCC 7 cut(s) 124, 125, 418, 1470, 1514, 1589, 1636
AsuC2I CCSGG 3 cut(s) 35, 476, 1208
AsuHPI GGTGA 7 cut(s) 64, 230, 944, 1170, 1318, 1465, 1537
AvaI CYCGRG 1 cut(s) 1684
BaeGI GKGCMC 1 cut(s) 128
BaeI ACNNNNGTAYC 2 cut(s) 1062, 1095
BanII GRGCYC 2 cut(s) 128, 701
BauI CACGAG 1 cut(s) 858
BbsI GAAGAC 2 cut(s) 10, 639
Bbv12I GWGCWC 1 cut(s) 701
BbvI GCAGC 8 cut(s) 451, 454, 732, 868, 1031, 1228, 1264, 1366
BccI CCATC 4 cut(s) 76, 181, 1295, 1627
BceAI ACGGC 3 cut(s) 654, 831, 1470
BciT130I CCWGG 1 cut(s) 975
BcnI CCSGG 3 cut(s) 35, 476, 1208
BcoDI GTCTC 2 cut(s) 215, 1694
BfrI CTTAAG 1 cut(s) 59
BglI GCCNNNNNGGC 1 cut(s) 132
BisI GCNGC 8 cut(s) 465, 468, 721, 882, 1020, 1217, 1278, 1380
BlsI GCNGC 8 cut(s) 466, 469, 722, 883, 1021, 1218, 1279, 1381
Bme1390I CCNGG 4 cut(s) 35, 476, 975, 1208
BmeT110I CYCGRG 1 cut(s) 1684
BmgT120I GGNCC 7 cut(s) 124, 125, 418, 1470, 1514, 1589, 1636
BmiI GGNNCC 6 cut(s) 75, 125, 126, 972, 1516, 1591
BmrFI CCNGG 4 cut(s) 35, 476, 975, 1208
BmrI ACTGGG 1 cut(s) 513
BmsI GCATC 3 cut(s) 934, 962, 1006
BmuI ACTGGG 1 cut(s) 513
BpiI GAAGAC 2 cut(s) 10, 639
BplI GAGNNNNNCTC 2 cut(s) 686, 718
BpmI CTGGAG 3 cut(s) 933, 1125, 1686
BpuEI CTTGAG 1 cut(s) 640
BpuMI CCSGG 3 cut(s) 35, 476, 1208
BsaBI GATNNNNATC 1 cut(s) 852
BsaJI CCNNGG 4 cut(s) 119, 670, 1486, 1639
BsaWI WCCGGW 2 cut(s) 76, 887
Bsc4I CCNNNNNNNGG 2 cut(s) 1207, 1522
Bse1I ACTGG 6 cut(s) 102, 239, 508, 750, 1108, 1516
Bse3DI GCAATG 2 cut(s) 1381, 1626
Bse8I GATNNNNATC 1 cut(s) 852
BseAI TCCGGA 2 cut(s) 76, 887
BseBI CCWGG 1 cut(s) 975
BseDI CCNNGG 4 cut(s) 119, 670, 1486, 1639
BseGI GGATG 5 cut(s) 746, 949, 1021, 1543, 1638
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 2 cut(s) 1207, 1522
BseMI GCAATG 2 cut(s) 1381, 1626
BseMII CTCAG 3 cut(s) 1136, 1178, 1705
BseNI ACTGG 6 cut(s) 102, 239, 508, 750, 1108, 1516
BseRI GAGGAG 2 cut(s) 691, 983
BseSI GKGCMC 1 cut(s) 128
BseXI GCAGC 8 cut(s) 451, 454, 732, 868, 1031, 1228, 1264, 1366
BshFI GGCC 6 cut(s) 126, 419, 1472, 1515, 1590, 1638
BsiHKAI GWGCWC 1 cut(s) 701
BsiHKCI CYCGRG 1 cut(s) 1684
BsiSI CCGG 5 cut(s) 34, 77, 475, 888, 1208
BslFI GGGAC 3 cut(s) 491, 1183, 1190
BslI CCNNNNNNNGG 2 cut(s) 1207, 1522
BsmAI GTCTC 2 cut(s) 215, 1694
BsmFI GGGAC 3 cut(s) 491, 1183, 1190
BsnI GGCC 6 cut(s) 126, 419, 1472, 1515, 1590, 1638
BsoBI CYCGRG 1 cut(s) 1684
Bsp120I GGGCCC 1 cut(s) 124
Bsp1286I GDGCHC 2 cut(s) 128, 701
Bsp13I TCCGGA 2 cut(s) 76, 887
BspACI CCGC 4 cut(s) 128, 1013, 1535, 1698
BspANI GGCC 6 cut(s) 126, 419, 1472, 1515, 1590, 1638
BspCNI CTCAG 3 cut(s) 1135, 1177, 1704
BspEI TCCGGA 2 cut(s) 76, 887
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 6 cut(s) 75, 125, 126, 972, 1516, 1591
BspPI GGATC 8 cut(s) 295, 589, 738, 848, 915, 1262, 1312, 1633
BspTI CTTAAG 1 cut(s) 59
BsrDI GCAATG 2 cut(s) 1381, 1626
BsrI ACTGG 6 cut(s) 102, 239, 508, 750, 1108, 1516
BssECI CCNNGG 4 cut(s) 119, 670, 1486, 1639
BssSI CACGAG 1 cut(s) 858
BssT1I CCWWGG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 858
Bst2UI CCWGG 1 cut(s) 975
Bst4CI ACNGT 5 cut(s) 31, 785, 797, 1295, 1391
Bst6I CTCTTC 1 cut(s) 960
BstAFI CTTAAG 1 cut(s) 59
BstC8I GCNNGC 3 cut(s) 128, 297, 1384
BstDEI CTNAG 5 cut(s) 876, 1122, 1164, 1481, 1691
BstDSI CCRYGG 2 cut(s) 670, 1486
BstF5I GGATG 5 cut(s) 746, 949, 1021, 1543, 1638
BstMAI GTCTC 2 cut(s) 215, 1694
BstMWI GCNNNNNNNGC 3 cut(s) 132, 1019, 1106
BstNI CCWGG 1 cut(s) 975
BstSCI CCNGG 4 cut(s) 33, 474, 973, 1206
BstSLI GKGCMC 1 cut(s) 128
BstV1I GCAGC 8 cut(s) 451, 454, 732, 868, 1031, 1228, 1264, 1366
BstV2I GAAGAC 2 cut(s) 10, 639
BstX2I RGATCY 3 cut(s) 581, 907, 1304
BstYI RGATCY 3 cut(s) 581, 907, 1304
BsuRI GGCC 6 cut(s) 126, 419, 1472, 1515, 1590, 1638
BtgI CCRYGG 2 cut(s) 670, 1486
BtsCI GGATG 5 cut(s) 746, 949, 1021, 1543, 1638
BtsIMutI CAGTG 1 cut(s) 757
Cac8I GCNNGC 3 cut(s) 128, 297, 1384
CaiI CAGNNNCTG 2 cut(s) 956, 1052
CciI TCATGA 1 cut(s) 9
Cfr13I GGNCC 7 cut(s) 124, 125, 418, 1470, 1514, 1589, 1636
CseI GACGC 3 cut(s) 110, 1076, 1185
Csp6I GTAC 3 cut(s) 95, 484, 824
CspCI CAANNNNNGTGG 2 cut(s) 885, 920
CviAII CATG 6 cut(s) 10, 131, 284, 940, 979, 1609
CviQI GTAC 3 cut(s) 95, 484, 824
DdeI CTNAG 5 cut(s) 876, 1122, 1164, 1481, 1691
DraIII CACNNNGTG 1 cut(s) 671
Eam1104I CTCTTC 1 cut(s) 960
EarI CTCTTC 1 cut(s) 960
EciI GGCGGA 1 cut(s) 1550
Ecl136II GAGCTC 1 cut(s) 699
Eco130I CCWWGG 1 cut(s) 119
Eco24I GRGCYC 2 cut(s) 128, 701
Eco32I GATATC 1 cut(s) 1655
Eco53kI GAGCTC 1 cut(s) 699
Eco57I CTGAAG 2 cut(s) 984, 1395
Eco88I CYCGRG 1 cut(s) 1684
EcoICRI GAGCTC 1 cut(s) 699
EcoO109I RGGNCCY 2 cut(s) 124, 1589
EcoRII CCWGG 1 cut(s) 973
EcoRV GATATC 1 cut(s) 1655
EcoT14I CCWWGG 1 cut(s) 119
EcoT38I GRGCYC 2 cut(s) 128, 701
ErhI CCWWGG 1 cut(s) 119
FaeI CATG 6 cut(s) 13, 134, 287, 943, 982, 1612
FalI AAGNNNNNCTT 2 cut(s) 894, 926
FaqI GGGAC 3 cut(s) 491, 1183, 1190
FatI CATG 6 cut(s) 9, 130, 283, 939, 978, 1608
FauI CCCGC 1 cut(s) 135
FauNDI CATATG 1 cut(s) 1714
Fnu4HI GCNGC 8 cut(s) 465, 468, 721, 882, 1020, 1217, 1278, 1380
FokI GGATG 5 cut(s) 733, 956, 1028, 1550, 1645
FriOI GRGCYC 2 cut(s) 128, 701
Fsp4HI GCNGC 8 cut(s) 465, 468, 721, 882, 1020, 1217, 1278, 1380
GluI GCNGC 8 cut(s) 465, 468, 721, 882, 1020, 1217, 1278, 1380
GsuI CTGGAG 3 cut(s) 933, 1125, 1686
HaeIII GGCC 6 cut(s) 126, 419, 1472, 1515, 1590, 1638
HapII CCGG 5 cut(s) 34, 77, 475, 888, 1208
HgaI GACGC 3 cut(s) 110, 1076, 1185
Hin1II CATG 6 cut(s) 13, 134, 287, 943, 982, 1612
HincII GTYRAC 1 cut(s) 1703
HindII GTYRAC 1 cut(s) 1703
HinfI GANTC 9 cut(s) 55, 688, 808, 1055, 1323, 1418, 1475, 1528, 1687
HpaII CCGG 5 cut(s) 34, 77, 475, 888, 1208
HphI GGTGA 7 cut(s) 64, 230, 944, 1170, 1318, 1465, 1537
Hpy166II GTNNAC 5 cut(s) 824, 1233, 1448, 1490, 1703
Hpy188III TCNNGA 9 cut(s) 10, 67, 77, 692, 734, 888, 962, 1650, 1684
Hpy8I GTNNAC 5 cut(s) 824, 1233, 1448, 1490, 1703
HpyCH4III ACNGT 5 cut(s) 31, 785, 797, 1295, 1391
HpyCH4IV ACGT 1 cut(s) 486
HpyCH4V TGCA 5 cut(s) 140, 470, 1019, 1064, 1216
HpyF10VI GCNNNNNNNGC 3 cut(s) 132, 1019, 1106
HpyF3I CTNAG 5 cut(s) 876, 1122, 1164, 1481, 1691
HpySE526I ACGT 1 cut(s) 486
Hsp92II CATG 6 cut(s) 13, 134, 287, 943, 982, 1612
Kpn2I TCCGGA 2 cut(s) 76, 887
LmnI GCTCC 7 cut(s) 292, 704, 952, 970, 1106, 1568, 1661
Lsp1109I GCAGC 8 cut(s) 451, 454, 732, 868, 1031, 1228, 1264, 1366
LweI GCATC 3 cut(s) 934, 962, 1006
MaeII ACGT 1 cut(s) 486
MaeIII GTNAC 3 cut(s) 279, 663, 676
MboII GAAGA 9 cut(s) 10, 409, 489, 644, 658, 977, 1167, 1401, 1672
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 3 cut(s) 581, 907, 1304
MhlI GDGCHC 2 cut(s) 128, 701
MluCI AATT 6 cut(s) 39, 170, 450, 790, 1182, 1365
MlyI GAGTC 3 cut(s) 817, 1412, 1696
MmeI TCCRAC 2 cut(s) 469, 559
MroI TCCGGA 2 cut(s) 76, 887
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 4 cut(s) 42, 60, 1503, 1605
MspCI CTTAAG 1 cut(s) 59
MspI CCGG 5 cut(s) 34, 77, 475, 888, 1208
MspR9I CCNGG 4 cut(s) 35, 476, 975, 1208
MunI CAATTG 1 cut(s) 1182
MvaI CCWGG 1 cut(s) 975
MwoI GCNNNNNNNGC 3 cut(s) 132, 1019, 1106
NciI CCSGG 3 cut(s) 35, 476, 1208
NdeI CATATG 1 cut(s) 1714
NlaIII CATG 6 cut(s) 13, 134, 287, 943, 982, 1612
NlaIV GGNNCC 6 cut(s) 75, 125, 126, 972, 1516, 1591
NmuCI GTSAC 2 cut(s) 279, 663
PaeR7I CTCGAG 1 cut(s) 1684
PagI TCATGA 1 cut(s) 9
PdmI GAANNNNTTC 1 cut(s) 17
PfeI GAWTC 6 cut(s) 55, 688, 1055, 1323, 1475, 1528
PfoI TCCNGGA 1 cut(s) 33
PkrI GCNGC 8 cut(s) 466, 469, 722, 883, 1021, 1218, 1279, 1381
PleI GAGTC 3 cut(s) 816, 1412, 1695
PpsI GAGTC 3 cut(s) 816, 1412, 1695
Psp124BI GAGCTC 1 cut(s) 701
Psp6I CCWGG 1 cut(s) 973
PspGI CCWGG 1 cut(s) 973
PspN4I GGNNCC 6 cut(s) 75, 125, 126, 972, 1516, 1591
PspOMI GGGCCC 1 cut(s) 124
PspPI GGNCC 7 cut(s) 124, 125, 418, 1470, 1514, 1589, 1636
PsrI GAACNNNNNNTAC 4 cut(s) 78, 110, 856, 888
PstNI CAGNNNCTG 2 cut(s) 956, 1052
PsuI RGATCY 3 cut(s) 581, 907, 1304
RsaI GTAC 3 cut(s) 96, 485, 825
RsaNI GTAC 3 cut(s) 95, 484, 824
SacI GAGCTC 1 cut(s) 701
SaqAI TTAA 4 cut(s) 42, 60, 1503, 1605
SatI GCNGC 8 cut(s) 465, 468, 721, 882, 1020, 1217, 1278, 1380
Sau96I GGNCC 7 cut(s) 124, 125, 418, 1470, 1514, 1589, 1636
SchI GAGTC 3 cut(s) 817, 1412, 1696
ScrFI CCNGG 4 cut(s) 35, 476, 975, 1208
SduI GDGCHC 2 cut(s) 128, 701
SfaNI GCATC 3 cut(s) 934, 962, 1006
Sfr274I CTCGAG 1 cut(s) 1684
SlaI CTCGAG 1 cut(s) 1684
SmlI CTYRAG 3 cut(s) 59, 655, 1684
SmoI CTYRAG 3 cut(s) 59, 655, 1684
Sse9I AATT 6 cut(s) 39, 170, 450, 790, 1182, 1365
SsiI CCGC 4 cut(s) 128, 1013, 1535, 1698
SspI AATATT 1 cut(s) 742
SstI GAGCTC 1 cut(s) 701
StyD4I CCNGG 4 cut(s) 33, 474, 973, 1206
StyI CCWWGG 1 cut(s) 119
TaaI ACNGT 5 cut(s) 31, 785, 797, 1295, 1391
TaiI ACGT 1 cut(s) 489
TaqI TCGA 3 cut(s) 21, 691, 1685
TasI AATT 6 cut(s) 39, 170, 450, 790, 1182, 1365
TatI WGTACW 1 cut(s) 823
TfiI GAWTC 6 cut(s) 55, 688, 1055, 1323, 1475, 1528
Tru1I TTAA 4 cut(s) 42, 60, 1503, 1605
Tru9I TTAA 4 cut(s) 42, 60, 1503, 1605
TscAI CASTG 1 cut(s) 757
TseFI GTSAC 2 cut(s) 279, 663
TseI GCWGC 8 cut(s) 464, 467, 720, 881, 1019, 1216, 1277, 1379
Tsp45I GTSAC 2 cut(s) 279, 663
TspGWI ACGGA 2 cut(s) 122, 1581
TspRI CASTG 1 cut(s) 757
Vha464I CTTAAG 1 cut(s) 59
XapI RAATTY 2 cut(s) 170, 1365
XcmI CCANNNNNNNNNTGG 1 cut(s) 1100
XhoI CTCGAG 1 cut(s) 1684
XmnI GAANNNNTTC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.