Rh6AG493600

Clathrin interactor EPSIN

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
67028155 .. 67032622
4468 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG493600.1

Sequence Viewer

Length: 1848 bp
ATGAACCAACACCTGACCTGCGTCTCTATCTCCTCTGTAACGCACGCCAAACCAAGATCTGAATCATTCTTACTCCAAGATTCCGTCATGGATTTCATGAAGGTGTTCGATCAAACTGTCCGGGAAATAAAGAGGGAGGTGAATCTGAAGGTGTTGAAGGTTCCGGAGATGGAACAGAAGGTATTGGATGCAACGGATAATGAACCTTGGGGTCCTCATGGCTCTGCATTAGCAGAGATCGCACAGGCCACTAAGAAATTTTCGGAATGTCAGATGGTTATGAATGTTTTATGGACAAGATTGAGTGAGACAGGCAAGGACTGGCGTCTTGTCTATAAGTCATTGGCTGTCATAGAGTATCTGGTGTCACATGGATCGGAACGTGCTGTTGATGATATTATAGAACATACTTTCCAAATCTCATCACTCTCAAGTTTTGAATATGTTGAGCCAAGTGGGAAGGATATGGGTATAAATGTGAGGAAGAAGGCTGAAACCATTGTGGCCCTTTTGAATAATAAAGATAAAATACAAGAAGTTAGAAACAAAGCTGCTGCAAACCAGGACAAGTACTTTGGACTTTCATCTACTGGGATAACATACAAGTCAGGTTCAGCGACTTCGTCCTCTTATAGTAGTGGCAGCTATCAAAGTAGCGATCGCTATGGAGGTTCAAGTGGTGTAGGATCTGGCGATAGGTTCAAGGATAACTATAAGGACAGAGACCAATATGATGAAGACAAGTTTGAGAAGAAAACATCTAGTAGGTCACGCCGTGGCAGCAGAAAGGATCAGGATAATGTTTCATCCAGTGGTAAAAAGTCATCATATAAGACAAATGACTCTGATAAGTACAGTTCAAATCCCAGTCAGACCGCAAGTGTACTTTCGGATGATTATGAGGATGATTTTGATCCACGAGGGACTTCTACTACTAAGGCTGCTGCTGGAAGCTTAAACCAAGTGGATCTGTTTGGACAAAGTTTGATTGGTGATCTCATGGATGCTCCAGCATCTGTTCCCGAAGAGGTTGGTGATCTCATGAATAGTGGTTCATCAGAGGTTGATCTGTTTGCAGATGCAGCTTTTGTATCAGCACCACCACAGGCAGAAACGGAAGCATTTGCAGATGCAACTTTTGTATCAGCACCTCCCCAGGCAGACACTGAAGCATTTGCAGATGCAACTTTTGTATCAGCACCACCCCAGAAAGCAACTGGAGCAAGTTCTCATACTCAGAATGCCGTTGATCTATTTGCTTCCCAACCAACCATTTCTCAGTCGGCTTCTTCACCGGTTGACCTCTTTGCGGCCCCTGTTCCAGTTATGCAGCCAGAAACCAAGTCCACAAGTCCTGCACCGACAAACACCAACATTGTTGATCCCTTTGCTGCCGTTCCACTTAACAGTTTTGATGGATCTGATTTCTTGGGGGGATTCACCTCTCACTCTGGTTCAACATTTTCAGAACCTTCCCAAAGTTCTGCCAATGATACCAGCCACAGTAATTTGGATAGAAAATCTTCAGCTGACTCAAAGACACCACCCAAGAAGGATAGTTTCCAGGTGAAATCTGGCATTTGGGCTGATTCACTTAGCCGTGGACTGATTGATCTTAATATAACTGGTCCCAAGAAGGTGAATCTGGCGGATGTGGGGATTGTGGGTGGATTGAGTGACGGAGCAGATGAAAAGGAGAAAGGACCACCAACTTCTTTTTACATGGGTAGAGCAATGGGATCAGGGACGGGCCTCGGAAGATCTGGATTACAGGGAGCTGGAGATGATGACTTCTTCTCGAGTCTCGGTAGCGGTCAACAGTATTCATATGGTGGTTTTCAAAAGTAG

Protein Analysis

615

Amino Acids

65.86

Weight (kDa)

4.92

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 56 - 176 4.9e-43 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 26
AccIII TCCGGA 1 cut(s) 163
AciI CCGC 4 cut(s) 876, 1310, 1649, 1812
AclWI GGATC 8 cut(s) 382, 694, 798, 908, 975, 1376, 1426, 1747
AcsI RAATTY 1 cut(s) 257
AcuI CTGAAG 3 cut(s) 167, 1188, 1509
AcyI GRCGYC 1 cut(s) 325
AdeI CACNNNGTG 1 cut(s) 776
AfaI GTAC 3 cut(s) 572, 854, 885
AfiI CCNNNNNNNGG 1 cut(s) 1309
AgeI ACCGGT 1 cut(s) 1294
AgsI TTSAA 8 cut(s) 157, 440, 514, 675, 703, 861, 1458, 1841
AjnI CCWGG 3 cut(s) 561, 1155, 1563
AloI GAACNNNNNNTCC 2 cut(s) 396, 428
AluBI AGCT 6 cut(s) 551, 645, 954, 1085, 1529, 1778
AluI AGCT 6 cut(s) 551, 645, 954, 1085, 1529, 1778
Alw26I GTCTC 4 cut(s) 28, 302, 717, 1808
AlwI GGATC 8 cut(s) 382, 694, 798, 908, 975, 1376, 1426, 1747
AlwNI CAGNNNCTG 2 cut(s) 1016, 1166
Ama87I CYCGRG 1 cut(s) 1798
Aor13HI TCCGGA 1 cut(s) 163
AoxI GGCC 4 cut(s) 246, 504, 1311, 1750
ApeKI GCWGC 9 cut(s) 551, 554, 642, 780, 941, 944, 1082, 1330, 1391
ApoI RAATTY 1 cut(s) 257
ArsI GACNNNNNNTTYG 2 cut(s) 557, 589
AsiGI ACCGGT 1 cut(s) 1294
AsiSI GCGATCGC 1 cut(s) 661
Asp700I GAANNNNTTC 2 cut(s) 104, 1522
AspS9I GGNCC 6 cut(s) 212, 505, 1312, 1628, 1703, 1750
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 7 cut(s) 151, 1004, 1046, 1284, 1432, 1579, 1651
AvaI CYCGRG 1 cut(s) 1798
AvaII GGWCC 3 cut(s) 212, 1628, 1703
BaeI ACNNNNGTAYC 4 cut(s) 1125, 1158, 1176, 1209
BauI CACGAG 1 cut(s) 918
BbsI GAAGAC 1 cut(s) 744
BbvI GCAGC 9 cut(s) 538, 541, 654, 792, 928, 931, 1094, 1342, 1378
BccI CCATC 3 cut(s) 163, 268, 1409
BceAI ACGGC 4 cut(s) 759, 1229, 1379, 1584
BciT130I CCWGG 3 cut(s) 563, 1157, 1565
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 4 cut(s) 28, 302, 717, 1808
BfaI CTAG 1 cut(s) 762
BfuAI ACCTGC 1 cut(s) 26
BglII AGATCT 2 cut(s) 56, 1760
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 4 cut(s) 122, 563, 1157, 1565
Bme18I GGWCC 3 cut(s) 212, 1628, 1703
BmeT110I CYCGRG 1 cut(s) 1798
BmgT120I GGNCC 6 cut(s) 212, 505, 1312, 1628, 1703, 1750
BmiI GGNNCC 4 cut(s) 162, 213, 1314, 1630
BmrFI CCNGG 4 cut(s) 122, 563, 1157, 1565
BmrI ACTGGG 2 cut(s) 600, 861
BmsI GCATC 6 cut(s) 178, 994, 1022, 1069, 1120, 1171
BmuI ACTGGG 2 cut(s) 600, 861
BoxI GACNNNNGTC 2 cut(s) 20, 324
BpiI GAAGAC 1 cut(s) 744
BpmI CTGGAG 3 cut(s) 993, 1239, 1800
BpuEI CTTGAG 1 cut(s) 415
BpuMI CCSGG 1 cut(s) 122
BsaBI GATNNNNATC 2 cut(s) 61, 912
BsaHI GRCGYC 1 cut(s) 325
BsaI GGTCTC 1 cut(s) 717
BsaJI CCNNGG 5 cut(s) 206, 775, 1155, 1600, 1753
BsaWI WCCGGW 2 cut(s) 163, 1294
Bsc4I CCNNNNNNNGG 1 cut(s) 1309
Bse118I RCCGGY 1 cut(s) 1294
Bse1I ACTGG 7 cut(s) 326, 595, 810, 867, 1222, 1322, 1630
Bse3DI GCAATG 1 cut(s) 1740
Bse8I GATNNNNATC 2 cut(s) 61, 912
BseAI TCCGGA 1 cut(s) 163
BseBI CCWGG 3 cut(s) 563, 1157, 1565
BseDI CCNNGG 5 cut(s) 206, 775, 1155, 1600, 1753
BseGI GGATG 6 cut(s) 193, 806, 898, 910, 1009, 1657
BseJI GATNNNNATC 2 cut(s) 61, 912
BseLI CCNNNNNNNGG 1 cut(s) 1309
BseMI GCAATG 1 cut(s) 1740
BseMII CTCAG 2 cut(s) 1250, 1292
BseNI ACTGG 7 cut(s) 326, 595, 810, 867, 1222, 1322, 1630
BseRI GAGGAG 1 cut(s) 22
BseXI GCAGC 9 cut(s) 538, 541, 654, 792, 928, 931, 1094, 1342, 1378
BsgI GTGCAG 1 cut(s) 1341
Bsh1285I CGRYCG 1 cut(s) 661
BshFI GGCC 4 cut(s) 248, 506, 1313, 1752
BshTI ACCGGT 1 cut(s) 1294
BsiEI CGRYCG 1 cut(s) 661
BsiHKCI CYCGRG 1 cut(s) 1798
BsiSI CCGG 3 cut(s) 121, 164, 1295
BslFI GGGAC 3 cut(s) 937, 1614, 1759
BslI CCNNNNNNNGG 1 cut(s) 1309
BsmAI GTCTC 4 cut(s) 28, 302, 717, 1808
BsmBI CGTCTC 1 cut(s) 28
BsmFI GGGAC 3 cut(s) 937, 1614, 1759
BsmI GAATGC 1 cut(s) 1246
BsnI GGCC 4 cut(s) 248, 506, 1313, 1752
Bso31I GGTCTC 1 cut(s) 717
BsoBI CYCGRG 1 cut(s) 1798
Bsp13I TCCGGA 1 cut(s) 163
BspACI CCGC 4 cut(s) 876, 1310, 1649, 1812
BspANI GGCC 4 cut(s) 248, 506, 1313, 1752
BspCNI CTCAG 2 cut(s) 1249, 1291
BspEI TCCGGA 1 cut(s) 163
BspHI TCATGA 2 cut(s) 96, 1041
BspLI GGNNCC 4 cut(s) 162, 213, 1314, 1630
BspMI ACCTGC 1 cut(s) 26
BspPI GGATC 8 cut(s) 382, 694, 798, 908, 975, 1376, 1426, 1747
BspTNI GGTCTC 1 cut(s) 717
BsrDI GCAATG 1 cut(s) 1740
BsrFI RCCGGY 1 cut(s) 1294
BsrI ACTGG 7 cut(s) 326, 595, 810, 867, 1222, 1322, 1630
BssAI RCCGGY 1 cut(s) 1294
BssECI CCNNGG 5 cut(s) 206, 775, 1155, 1600, 1753
BssNI GRCGYC 1 cut(s) 325
BssSI CACGAG 1 cut(s) 918
BssT1I CCWWGG 1 cut(s) 206
Bst2BI CACGAG 1 cut(s) 918
Bst2UI CCWGG 3 cut(s) 563, 1157, 1565
Bst4CI ACNGT 5 cut(s) 118, 857, 1409, 1505, 1821
Bst6I CTCTTC 1 cut(s) 1020
BstACI GRCGYC 1 cut(s) 325
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 5 cut(s) 252, 936, 1236, 1278, 1595
BstDSI CCRYGG 2 cut(s) 775, 1600
BstF5I GGATG 6 cut(s) 193, 806, 898, 910, 1009, 1657
BstMAI GTCTC 4 cut(s) 28, 302, 717, 1808
BstMCI CGRYCG 1 cut(s) 661
BstMWI GCNNNNNNNGC 4 cut(s) 239, 780, 1082, 1220
BstNI CCWGG 3 cut(s) 563, 1157, 1565
BstPAI GACNNNNGTC 2 cut(s) 20, 324
BstSCI CCNGG 4 cut(s) 120, 561, 1155, 1563
BstV1I GCAGC 9 cut(s) 538, 541, 654, 792, 928, 931, 1094, 1342, 1378
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 5 cut(s) 56, 686, 967, 1418, 1760
BstYI RGATCY 5 cut(s) 56, 686, 967, 1418, 1760
BsuRI GGCC 4 cut(s) 248, 506, 1313, 1752
BtgI CCRYGG 2 cut(s) 775, 1600
BtsCI GGATG 6 cut(s) 193, 806, 898, 910, 1009, 1657
BtsIMutI CAGTG 2 cut(s) 817, 1164
BveI ACCTGC 1 cut(s) 26
Cac8I GCNNGC 1 cut(s) 45
CaiI CAGNNNCTG 2 cut(s) 1016, 1166
CciI TCATGA 2 cut(s) 96, 1041
Cfr10I RCCGGY 1 cut(s) 1294
Cfr13I GGNCC 6 cut(s) 212, 505, 1312, 1628, 1703, 1750
CseI GACGC 2 cut(s) 10, 314
Csp6I GTAC 3 cut(s) 571, 853, 884
CspAI ACCGGT 1 cut(s) 1294
CviAII CATG 7 cut(s) 88, 97, 218, 371, 1000, 1042, 1723
CviQI GTAC 3 cut(s) 571, 853, 884
DdeI CTNAG 5 cut(s) 252, 936, 1236, 1278, 1595
DraIII CACNNNGTG 1 cut(s) 776
Eam1104I CTCTTC 1 cut(s) 1020
EarI CTCTTC 1 cut(s) 1020
EciI GGCGGA 1 cut(s) 1664
Eco130I CCWWGG 1 cut(s) 206
Eco31I GGTCTC 1 cut(s) 717
Eco47I GGWCC 3 cut(s) 212, 1628, 1703
Eco57I CTGAAG 3 cut(s) 167, 1188, 1509
Eco88I CYCGRG 1 cut(s) 1798
EcoO109I RGGNCCY 1 cut(s) 212
EcoRII CCWGG 3 cut(s) 561, 1155, 1563
EcoT14I CCWWGG 1 cut(s) 206
ErhI CCWWGG 1 cut(s) 206
Esp3I CGTCTC 1 cut(s) 28
FaeI CATG 7 cut(s) 91, 100, 221, 374, 1003, 1045, 1726
FaqI GGGAC 3 cut(s) 937, 1614, 1759
FatI CATG 7 cut(s) 87, 96, 217, 370, 999, 1041, 1722
FauNDI CATATG 1 cut(s) 1828
FokI GGATG 6 cut(s) 200, 793, 905, 917, 1016, 1664
FspBI CTAG 1 cut(s) 762
GsuI CTGGAG 3 cut(s) 993, 1239, 1800
HaeIII GGCC 4 cut(s) 248, 506, 1313, 1752
HapII CCGG 3 cut(s) 121, 164, 1295
HgaI GACGC 2 cut(s) 10, 314
Hin1I GRCGYC 1 cut(s) 325
Hin1II CATG 7 cut(s) 91, 100, 221, 374, 1003, 1045, 1726
HincII GTYRAC 2 cut(s) 1300, 1817
HindII GTYRAC 2 cut(s) 1300, 1817
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 9 cut(s) 62, 80, 142, 842, 1437, 1532, 1589, 1642, 1801
HpaII CCGG 3 cut(s) 121, 164, 1295
HphI GGTGA 7 cut(s) 151, 1004, 1046, 1284, 1432, 1579, 1651
Hpy166II GTNNAC 5 cut(s) 884, 1300, 1347, 1604, 1817
Hpy188III TCNNGA 7 cut(s) 97, 164, 794, 1022, 1042, 1764, 1798
Hpy8I GTNNAC 5 cut(s) 884, 1300, 1347, 1604, 1817
HpyAV CCTTC 9 cut(s) 94, 142, 151, 172, 454, 481, 1482, 1546, 1630
HpyCH4III ACNGT 5 cut(s) 118, 857, 1409, 1505, 1821
HpyCH4IV ACGT 1 cut(s) 382
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 780, 1082, 1220
HpyF3I CTNAG 5 cut(s) 252, 936, 1236, 1278, 1595
HpySE526I ACGT 1 cut(s) 382
Hsp92I GRCGYC 1 cut(s) 325
Hsp92II CATG 7 cut(s) 91, 100, 221, 374, 1003, 1045, 1726
Kpn2I TCCGGA 1 cut(s) 163
LmnI GCTCC 4 cut(s) 1012, 1220, 1682, 1775
Lsp1109I GCAGC 9 cut(s) 538, 541, 654, 792, 928, 931, 1094, 1342, 1378
LweI GCATC 6 cut(s) 178, 994, 1022, 1069, 1120, 1171
MaeI CTAG 1 cut(s) 762
MaeII ACGT 1 cut(s) 382
MaeIII GTNAC 4 cut(s) 37, 366, 768, 1676
MboII GAAGA 8 cut(s) 496, 749, 763, 1037, 1281, 1515, 1770, 1786
MflI RGATCY 5 cut(s) 56, 686, 967, 1418, 1760
MluCI AATT 2 cut(s) 257, 1507
MlyI GAGTC 3 cut(s) 836, 1526, 1810
MroI TCCGGA 1 cut(s) 163
MroXI GAANNNNTTC 2 cut(s) 104, 1522
MseI TTAA 3 cut(s) 956, 1404, 1617
MslI CAYNNNNRTG 1 cut(s) 101
MspA1I CMGCKG 1 cut(s) 1529
MspI CCGG 3 cut(s) 121, 164, 1295
MspR9I CCNGG 4 cut(s) 122, 563, 1157, 1565
Mva1269I GAATGC 1 cut(s) 1246
MvaI CCWGG 3 cut(s) 563, 1157, 1565
MwoI GCNNNNNNNGC 4 cut(s) 239, 780, 1082, 1220
NciI CCSGG 1 cut(s) 122
NdeI CATATG 1 cut(s) 1828
NlaIII CATG 7 cut(s) 91, 100, 221, 374, 1003, 1045, 1726
NlaIV GGNNCC 4 cut(s) 162, 213, 1314, 1630
NmuCI GTSAC 3 cut(s) 366, 768, 1676
PaeR7I CTCGAG 1 cut(s) 1798
PagI TCATGA 2 cut(s) 96, 1041
PctI GAATGC 1 cut(s) 1246
PdmI GAANNNNTTC 2 cut(s) 104, 1522
PfeI GAWTC 6 cut(s) 62, 80, 142, 1437, 1589, 1642
PflFI GACNNNGTC 1 cut(s) 622
PfoI TCCNGGA 1 cut(s) 120
PinAI ACCGGT 1 cut(s) 1294
Ple19I CGATCG 1 cut(s) 661
PleI GAGTC 3 cut(s) 836, 1526, 1809
PpsI GAGTC 3 cut(s) 836, 1526, 1809
PpuMI RGGWCCY 1 cut(s) 212
PshAI GACNNNNGTC 2 cut(s) 20, 324
Psp5II RGGWCCY 1 cut(s) 212
Psp6I CCWGG 3 cut(s) 561, 1155, 1563
PspGI CCWGG 3 cut(s) 561, 1155, 1563
PspN4I GGNNCC 4 cut(s) 162, 213, 1314, 1630
PspPI GGNCC 6 cut(s) 212, 505, 1312, 1628, 1703, 1750
PspPPI RGGWCCY 1 cut(s) 212
PstNI CAGNNNCTG 2 cut(s) 1016, 1166
PsuI RGATCY 5 cut(s) 56, 686, 967, 1418, 1760
PsyI GACNNNGTC 1 cut(s) 622
PvuI CGATCG 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 1529
RgaI GCGATCGC 1 cut(s) 661
RsaI GTAC 3 cut(s) 572, 854, 885
RsaNI GTAC 3 cut(s) 571, 853, 884
RseI CAYNNNNRTG 1 cut(s) 101
SaqAI TTAA 3 cut(s) 956, 1404, 1617
Sau96I GGNCC 6 cut(s) 212, 505, 1312, 1628, 1703, 1750
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 3 cut(s) 836, 1526, 1810
ScrFI CCNGG 4 cut(s) 122, 563, 1157, 1565
SfaAI GCGATCGC 1 cut(s) 661
SfaNI GCATC 6 cut(s) 178, 994, 1022, 1069, 1120, 1171
Sfr274I CTCGAG 1 cut(s) 1798
SgfI GCGATCGC 1 cut(s) 661
SinI GGWCC 3 cut(s) 212, 1628, 1703
SlaI CTCGAG 1 cut(s) 1798
SmiMI CAYNNNNRTG 1 cut(s) 101
SmlI CTYRAG 2 cut(s) 430, 1798
SmoI CTYRAG 2 cut(s) 430, 1798
Sse9I AATT 2 cut(s) 257, 1507
SsiI CCGC 4 cut(s) 876, 1310, 1649, 1812
SspMI CTAG 1 cut(s) 762
StyD4I CCNGG 4 cut(s) 120, 561, 1155, 1563
StyI CCWWGG 1 cut(s) 206
TaaI ACNGT 5 cut(s) 118, 857, 1409, 1505, 1821
TaiI ACGT 1 cut(s) 385
TaqI TCGA 2 cut(s) 108, 1799
TasI AATT 2 cut(s) 257, 1507
TatI WGTACW 3 cut(s) 570, 852, 883
TauI GCSGC 1 cut(s) 1313
TfiI GAWTC 6 cut(s) 62, 80, 142, 1437, 1589, 1642
Tru1I TTAA 3 cut(s) 956, 1404, 1617
Tru9I TTAA 3 cut(s) 956, 1404, 1617
TscAI CASTG 2 cut(s) 817, 1171
TseFI GTSAC 3 cut(s) 366, 768, 1676
TseI GCWGC 9 cut(s) 551, 554, 642, 780, 941, 944, 1082, 1330, 1391
Tsp45I GTSAC 3 cut(s) 366, 768, 1676
TspGWI ACGGA 4 cut(s) 73, 209, 1130, 1695
TspRI CASTG 2 cut(s) 817, 1171
Tth111I GACNNNGTC 1 cut(s) 622
VpaK11BI GGWCC 3 cut(s) 212, 1628, 1703
XapI RAATTY 1 cut(s) 257
XcmI CCANNNNNNNNNTGG 2 cut(s) 1214, 1571
XhoI CTCGAG 1 cut(s) 1798
XmnI GAANNNNTTC 2 cut(s) 104, 1522
XspI CTAG 1 cut(s) 762
ZrmI AGTACT 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.