Rmu_sc0002348.1_g000002

Clathrin interactor EPSIN

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002348.1
Physical Location & Seq
Reverse (-)
3030 .. 7237
4208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002348.1_g000002.1.cds

Sequence Viewer

Length: 1833 bp
ctgacctgcgtctctatctcctctgtaacgcacgccaaaccaagatctgaaccattcttactccaagattccatcatggatttcatgaaggtgttcgatcaaactgtccgggaaataaagagggaggtgaatctgaaggtgttgaaggttccggagatggaacagaaggtattggatgcaacggataatgaaccttggggtcctcatggctctgcattggcagagatcgcacaggccactaagaaattttcggaatgtcagatggttatgagtgttttatggacaagattgagtgagacaggcaaggactggcgtcttgtctataagtcattggctgtcatagagtatctggtgtcacatggatcggaacgtgctgttgatgatattatagaacatactttccaaatctcatcactctcaagttttgaatatgttgagccaagtgggaaggatatgggtataaatgtgaggaagaaggctgaaaccattgtggcccttttgaataataaagataaaatacaagaagttagaaataaagctgctgcaaaccaggacaagtactttggactttcatctactgggataacatacaagtcaggttcagcaacttcgtcctcttatagtagtggcagctatcaaagtagcgatcgctatggaggttcaagtggtgtaggatctggcgataggttcaaggataactataaggacagagaccaatatgatgaagacaagtttgagaagaaaacctctagtaggtcacgccgtggcagcagaaaggatcaggataatgtttcatccagtgttaaaaagtcatcatataagacaaatgactctgataagtacagttcaaatcccagtcagactgcaagtgtactttcggatgattatgaggatgattttgatccacgagggacttctactactaaggctgctgctggaagctcaaaccaagtggatctgtttggacaaagtttgattggtgatctcatggatgctccagcatctgttcccgaagagaagcctggcatgaatagtggttcatcagaggttgatctgtttgcagatgcagcttttgtatcagcaccaccacaggcagaaacggaagcatttgcagatgcaacttttgtatcagcacctccccaggcagacactgaagcatttgcagatgcaacttttgtatcagcaccaccccagaaagcaactggagcaagttctcaaactcagaatgctgttgatctatttgcttcccaaccaaccatttctcagtcggcttcttcaccggttgacctctttgcggcccctgttccagttatgcagccagaaaccaagtccacaagtcctgcaccgacaaacaccaacattgttgatccctttgctgccgttccacttaacagttttgatggatctgatttcttggggggattcacctctcactctggttcaacattttcagaaccttcccaaagttctgccaatgatgccagccacagtaatttggatagaaaatcttcagccgactcaaagacaccacccaagaaggatggtttccaggtgaaatctggcatttgggctgattcacttagccgtggactgattgatcttaatataactggtcccaagaaggtgaatctggcggatgtggggattgtgggtggattgagtgacggagcagatgaaaaggagaaaggaccaccaacttctttttacatgggtagagcaatgggatcagggactggcctcggaagatctggattacagggagctggagatgatgacttcttctcgagtctcagtagcggtcaacaatattcatatggtggttttcaaaagtag

Protein Analysis

610

Amino Acids

65.22

Weight (kDa)

4.92

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 14
AccIII TCCGGA 1 cut(s) 151
AciI CCGC 3 cut(s) 1295, 1634, 1797
AclWI GGATC 8 cut(s) 370, 682, 786, 896, 963, 1361, 1411, 1732
AcsI RAATTY 1 cut(s) 245
AcuI CTGAAG 3 cut(s) 155, 1173, 1494
AcyI GRCGYC 1 cut(s) 313
AdeI CACNNNGTG 1 cut(s) 764
AfaI GTAC 3 cut(s) 560, 842, 873
AfiI CCNNNNNNNGG 2 cut(s) 753, 1294
AgeI ACCGGT 1 cut(s) 1279
AgsI TTSAA 8 cut(s) 145, 428, 502, 663, 691, 849, 1443, 1826
AjnI CCWGG 4 cut(s) 549, 1021, 1140, 1548
AloI GAACNNNNNNTCC 2 cut(s) 384, 416
AluBI AGCT 5 cut(s) 539, 633, 942, 1070, 1763
AluI AGCT 5 cut(s) 539, 633, 942, 1070, 1763
Alw26I GTCTC 4 cut(s) 16, 290, 705, 1793
AlwI GGATC 8 cut(s) 370, 682, 786, 896, 963, 1361, 1411, 1732
AlwNI CAGNNNCTG 3 cut(s) 1004, 1151, 1733
Ama87I CYCGRG 1 cut(s) 1783
Aor13HI TCCGGA 1 cut(s) 151
AoxI GGCC 4 cut(s) 234, 492, 1296, 1735
ApeKI GCWGC 9 cut(s) 539, 542, 630, 768, 929, 932, 1067, 1315, 1376
ApoI RAATTY 1 cut(s) 245
ArsI GACNNNNNNTTYG 2 cut(s) 545, 577
AsiGI ACCGGT 1 cut(s) 1279
AsiSI GCGATCGC 1 cut(s) 649
Asp700I GAANNNNTTC 2 cut(s) 92, 1507
AspS9I GGNCC 5 cut(s) 200, 493, 1297, 1613, 1688
AsuC2I CCSGG 1 cut(s) 110
AsuHPI GGTGA 6 cut(s) 139, 992, 1269, 1417, 1564, 1636
AvaI CYCGRG 1 cut(s) 1783
AvaII GGWCC 3 cut(s) 200, 1613, 1688
BaeI ACNNNNGTAYC 4 cut(s) 1110, 1143, 1161, 1194
BauI CACGAG 1 cut(s) 906
BbsI GAAGAC 1 cut(s) 732
BbvI GCAGC 9 cut(s) 526, 529, 642, 780, 916, 919, 1079, 1327, 1363
BccI CCATC 5 cut(s) 80, 151, 256, 1394, 1535
BceAI ACGGC 3 cut(s) 747, 1364, 1569
BciT130I CCWGG 4 cut(s) 551, 1023, 1142, 1550
BcnI CCSGG 1 cut(s) 110
BcoDI GTCTC 4 cut(s) 16, 290, 705, 1793
BfaI CTAG 1 cut(s) 750
BfuAI ACCTGC 1 cut(s) 14
BglII AGATCT 2 cut(s) 44, 1745
BmcAI AGTACT 1 cut(s) 560
Bme1390I CCNGG 5 cut(s) 110, 551, 1023, 1142, 1550
Bme18I GGWCC 3 cut(s) 200, 1613, 1688
BmeT110I CYCGRG 1 cut(s) 1783
BmgT120I GGNCC 5 cut(s) 200, 493, 1297, 1613, 1688
BmiI GGNNCC 4 cut(s) 150, 201, 1299, 1615
BmrFI CCNGG 5 cut(s) 110, 551, 1023, 1142, 1550
BmrI ACTGGG 2 cut(s) 588, 849
BmsI GCATC 7 cut(s) 166, 982, 1010, 1054, 1105, 1156, 1468
BmuI ACTGGG 2 cut(s) 588, 849
BoxI GACNNNNGTC 2 cut(s) 8, 312
BpiI GAAGAC 1 cut(s) 732
BpmI CTGGAG 3 cut(s) 981, 1224, 1785
BpuEI CTTGAG 1 cut(s) 403
BpuMI CCSGG 1 cut(s) 110
BsaBI GATNNNNATC 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 313
BsaI GGTCTC 1 cut(s) 705
BsaJI CCNNGG 5 cut(s) 194, 763, 1140, 1585, 1738
BsaWI WCCGGW 2 cut(s) 151, 1279
Bsc4I CCNNNNNNNGG 2 cut(s) 753, 1294
Bse118I RCCGGY 1 cut(s) 1279
Bse1I ACTGG 8 cut(s) 314, 583, 798, 855, 1207, 1307, 1615, 1738
Bse3DI GCAATG 1 cut(s) 1725
Bse8I GATNNNNATC 1 cut(s) 900
BseAI TCCGGA 1 cut(s) 151
BseBI CCWGG 4 cut(s) 551, 1023, 1142, 1550
BseDI CCNNGG 5 cut(s) 194, 763, 1140, 1585, 1738
BseGI GGATG 7 cut(s) 181, 794, 886, 898, 997, 1546, 1642
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 2 cut(s) 753, 1294
BseMI GCAATG 1 cut(s) 1725
BseMII CTCAG 3 cut(s) 1235, 1277, 1804
BseNI ACTGG 8 cut(s) 314, 583, 798, 855, 1207, 1307, 1615, 1738
BseRI GAGGAG 1 cut(s) 10
BseXI GCAGC 9 cut(s) 526, 529, 642, 780, 916, 919, 1079, 1327, 1363
BsgI GTGCAG 1 cut(s) 1326
Bsh1285I CGRYCG 1 cut(s) 649
BshFI GGCC 4 cut(s) 236, 494, 1298, 1737
BshTI ACCGGT 1 cut(s) 1279
BsiEI CGRYCG 1 cut(s) 649
BsiHKCI CYCGRG 1 cut(s) 1783
BsiSI CCGG 3 cut(s) 109, 152, 1280
BslFI GGGAC 3 cut(s) 925, 1599, 1744
BslI CCNNNNNNNGG 2 cut(s) 753, 1294
BsmAI GTCTC 4 cut(s) 16, 290, 705, 1793
BsmBI CGTCTC 1 cut(s) 16
BsmFI GGGAC 3 cut(s) 925, 1599, 1744
BsmI GAATGC 1 cut(s) 1231
BsnI GGCC 4 cut(s) 236, 494, 1298, 1737
Bso31I GGTCTC 1 cut(s) 705
BsoBI CYCGRG 1 cut(s) 1783
Bsp13I TCCGGA 1 cut(s) 151
BspACI CCGC 3 cut(s) 1295, 1634, 1797
BspANI GGCC 4 cut(s) 236, 494, 1298, 1737
BspCNI CTCAG 3 cut(s) 1234, 1276, 1803
BspEI TCCGGA 1 cut(s) 151
BspHI TCATGA 1 cut(s) 84
BspLI GGNNCC 4 cut(s) 150, 201, 1299, 1615
BspMI ACCTGC 1 cut(s) 14
BspPI GGATC 8 cut(s) 370, 682, 786, 896, 963, 1361, 1411, 1732
BspTNI GGTCTC 1 cut(s) 705
BsrDI GCAATG 1 cut(s) 1725
BsrFI RCCGGY 1 cut(s) 1279
BsrI ACTGG 8 cut(s) 314, 583, 798, 855, 1207, 1307, 1615, 1738
BssAI RCCGGY 1 cut(s) 1279
BssECI CCNNGG 5 cut(s) 194, 763, 1140, 1585, 1738
BssNI GRCGYC 1 cut(s) 313
BssSI CACGAG 1 cut(s) 906
BssT1I CCWWGG 1 cut(s) 194
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 4 cut(s) 551, 1023, 1142, 1550
Bst4CI ACNGT 4 cut(s) 106, 845, 1394, 1490
Bst6I CTCTTC 1 cut(s) 1008
BstACI GRCGYC 1 cut(s) 313
BstC8I GCNNGC 2 cut(s) 33, 1483
BstDEI CTNAG 6 cut(s) 240, 924, 1221, 1263, 1580, 1790
BstDSI CCRYGG 2 cut(s) 763, 1585
BstENI CCTNNNNNAGG 1 cut(s) 751
BstF5I GGATG 7 cut(s) 181, 794, 886, 898, 997, 1546, 1642
BstMAI GTCTC 4 cut(s) 16, 290, 705, 1793
BstMCI CGRYCG 1 cut(s) 649
BstMWI GCNNNNNNNGC 5 cut(s) 227, 768, 1067, 1205, 1478
BstNI CCWGG 4 cut(s) 551, 1023, 1142, 1550
BstPAI GACNNNNGTC 2 cut(s) 8, 312
BstSCI CCNGG 5 cut(s) 108, 549, 1021, 1140, 1548
BstV1I GCAGC 9 cut(s) 526, 529, 642, 780, 916, 919, 1079, 1327, 1363
BstV2I GAAGAC 1 cut(s) 732
BstX2I RGATCY 5 cut(s) 44, 674, 955, 1403, 1745
BstYI RGATCY 5 cut(s) 44, 674, 955, 1403, 1745
BsuRI GGCC 4 cut(s) 236, 494, 1298, 1737
BtgI CCRYGG 2 cut(s) 763, 1585
BtsCI GGATG 7 cut(s) 181, 794, 886, 898, 997, 1546, 1642
BtsIMutI CAGTG 2 cut(s) 805, 1149
BveI ACCTGC 1 cut(s) 14
Cac8I GCNNGC 2 cut(s) 33, 1483
CaiI CAGNNNCTG 3 cut(s) 1004, 1151, 1733
CciI TCATGA 1 cut(s) 84
Cfr10I RCCGGY 1 cut(s) 1279
Cfr13I GGNCC 5 cut(s) 200, 493, 1297, 1613, 1688
CseI GACGC 1 cut(s) 302
Csp6I GTAC 3 cut(s) 559, 841, 872
CspAI ACCGGT 1 cut(s) 1279
CspCI CAANNNNNGTGG 2 cut(s) 933, 968
CviAII CATG 7 cut(s) 76, 85, 206, 359, 988, 1027, 1708
CviQI GTAC 3 cut(s) 559, 841, 872
DdeI CTNAG 6 cut(s) 240, 924, 1221, 1263, 1580, 1790
DraIII CACNNNGTG 1 cut(s) 764
Eam1104I CTCTTC 1 cut(s) 1008
EarI CTCTTC 1 cut(s) 1008
EciI GGCGGA 1 cut(s) 1649
Eco130I CCWWGG 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 705
Eco47I GGWCC 3 cut(s) 200, 1613, 1688
Eco57I CTGAAG 3 cut(s) 155, 1173, 1494
Eco88I CYCGRG 1 cut(s) 1783
EcoNI CCTNNNNNAGG 1 cut(s) 751
EcoO109I RGGNCCY 1 cut(s) 200
EcoRII CCWGG 4 cut(s) 549, 1021, 1140, 1548
EcoT14I CCWWGG 1 cut(s) 194
ErhI CCWWGG 1 cut(s) 194
Esp3I CGTCTC 1 cut(s) 16
FaeI CATG 7 cut(s) 79, 88, 209, 362, 991, 1030, 1711
FaqI GGGAC 3 cut(s) 925, 1599, 1744
FatI CATG 7 cut(s) 75, 84, 205, 358, 987, 1026, 1707
FauNDI CATATG 1 cut(s) 1813
FokI GGATG 7 cut(s) 188, 781, 893, 905, 1004, 1553, 1649
FspBI CTAG 1 cut(s) 750
GsuI CTGGAG 3 cut(s) 981, 1224, 1785
HaeIII GGCC 4 cut(s) 236, 494, 1298, 1737
HapII CCGG 3 cut(s) 109, 152, 1280
HgaI GACGC 1 cut(s) 302
Hin1I GRCGYC 1 cut(s) 313
Hin1II CATG 7 cut(s) 79, 88, 209, 362, 991, 1030, 1711
HincII GTYRAC 2 cut(s) 1285, 1802
HindII GTYRAC 2 cut(s) 1285, 1802
HinfI GANTC 8 cut(s) 68, 130, 830, 1422, 1517, 1574, 1627, 1786
HpaII CCGG 3 cut(s) 109, 152, 1280
HphI GGTGA 6 cut(s) 139, 992, 1269, 1417, 1564, 1636
Hpy166II GTNNAC 5 cut(s) 872, 1285, 1332, 1589, 1802
Hpy188III TCNNGA 6 cut(s) 85, 152, 782, 1010, 1749, 1783
Hpy8I GTNNAC 5 cut(s) 872, 1285, 1332, 1589, 1802
HpyAV CCTTC 9 cut(s) 82, 130, 139, 160, 442, 469, 1467, 1531, 1615
HpyCH4III ACNGT 4 cut(s) 106, 845, 1394, 1490
HpyCH4IV ACGT 1 cut(s) 370
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 768, 1067, 1205, 1478
HpyF3I CTNAG 6 cut(s) 240, 924, 1221, 1263, 1580, 1790
HpySE526I ACGT 1 cut(s) 370
Hsp92I GRCGYC 1 cut(s) 313
Hsp92II CATG 7 cut(s) 79, 88, 209, 362, 991, 1030, 1711
Kpn2I TCCGGA 1 cut(s) 151
LmnI GCTCC 4 cut(s) 1000, 1205, 1667, 1760
Lsp1109I GCAGC 9 cut(s) 526, 529, 642, 780, 916, 919, 1079, 1327, 1363
LweI GCATC 7 cut(s) 166, 982, 1010, 1054, 1105, 1156, 1468
MaeI CTAG 1 cut(s) 750
MaeII ACGT 1 cut(s) 370
MaeIII GTNAC 4 cut(s) 25, 354, 756, 1661
MboII GAAGA 8 cut(s) 484, 737, 751, 1025, 1266, 1500, 1755, 1771
MflI RGATCY 5 cut(s) 44, 674, 955, 1403, 1745
MluCI AATT 2 cut(s) 245, 1492
MlyI GAGTC 3 cut(s) 824, 1511, 1795
MroI TCCGGA 1 cut(s) 151
MroXI GAANNNNTTC 2 cut(s) 92, 1507
MseI TTAA 3 cut(s) 804, 1389, 1602
MslI CAYNNNNRTG 1 cut(s) 89
MspI CCGG 3 cut(s) 109, 152, 1280
MspR9I CCNGG 5 cut(s) 110, 551, 1023, 1142, 1550
Mva1269I GAATGC 1 cut(s) 1231
MvaI CCWGG 4 cut(s) 551, 1023, 1142, 1550
MwoI GCNNNNNNNGC 5 cut(s) 227, 768, 1067, 1205, 1478
NciI CCSGG 1 cut(s) 110
NdeI CATATG 1 cut(s) 1813
NlaIII CATG 7 cut(s) 79, 88, 209, 362, 991, 1030, 1711
NlaIV GGNNCC 4 cut(s) 150, 201, 1299, 1615
NmuCI GTSAC 3 cut(s) 354, 756, 1661
PaeR7I CTCGAG 1 cut(s) 1783
PagI TCATGA 1 cut(s) 84
PctI GAATGC 1 cut(s) 1231
PdmI GAANNNNTTC 2 cut(s) 92, 1507
PfeI GAWTC 5 cut(s) 68, 130, 1422, 1574, 1627
PfoI TCCNGGA 1 cut(s) 108
PinAI ACCGGT 1 cut(s) 1279
Ple19I CGATCG 1 cut(s) 649
PleI GAGTC 3 cut(s) 824, 1511, 1794
PpsI GAGTC 3 cut(s) 824, 1511, 1794
PpuMI RGGWCCY 1 cut(s) 200
PshAI GACNNNNGTC 2 cut(s) 8, 312
Psp5II RGGWCCY 1 cut(s) 200
Psp6I CCWGG 4 cut(s) 549, 1021, 1140, 1548
PspGI CCWGG 4 cut(s) 549, 1021, 1140, 1548
PspN4I GGNNCC 4 cut(s) 150, 201, 1299, 1615
PspPI GGNCC 5 cut(s) 200, 493, 1297, 1613, 1688
PspPPI RGGWCCY 1 cut(s) 200
PsrI GAACNNNNNNTAC 2 cut(s) 42, 74
PstNI CAGNNNCTG 3 cut(s) 1004, 1151, 1733
PsuI RGATCY 5 cut(s) 44, 674, 955, 1403, 1745
PvuI CGATCG 1 cut(s) 649
RgaI GCGATCGC 1 cut(s) 649
RsaI GTAC 3 cut(s) 560, 842, 873
RsaNI GTAC 3 cut(s) 559, 841, 872
RseI CAYNNNNRTG 1 cut(s) 89
SaqAI TTAA 3 cut(s) 804, 1389, 1602
Sau96I GGNCC 5 cut(s) 200, 493, 1297, 1613, 1688
ScaI AGTACT 1 cut(s) 560
SchI GAGTC 3 cut(s) 824, 1511, 1795
ScrFI CCNGG 5 cut(s) 110, 551, 1023, 1142, 1550
SfaAI GCGATCGC 1 cut(s) 649
SfaNI GCATC 7 cut(s) 166, 982, 1010, 1054, 1105, 1156, 1468
Sfr274I CTCGAG 1 cut(s) 1783
SgfI GCGATCGC 1 cut(s) 649
SinI GGWCC 3 cut(s) 200, 1613, 1688
SlaI CTCGAG 1 cut(s) 1783
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 2 cut(s) 418, 1783
SmoI CTYRAG 2 cut(s) 418, 1783
Sse9I AATT 2 cut(s) 245, 1492
SsiI CCGC 3 cut(s) 1295, 1634, 1797
SspI AATATT 1 cut(s) 1808
SspMI CTAG 1 cut(s) 750
StyD4I CCNGG 5 cut(s) 108, 549, 1021, 1140, 1548
StyI CCWWGG 1 cut(s) 194
TaaI ACNGT 4 cut(s) 106, 845, 1394, 1490
TaiI ACGT 1 cut(s) 373
TaqI TCGA 2 cut(s) 96, 1784
TasI AATT 2 cut(s) 245, 1492
TatI WGTACW 3 cut(s) 558, 840, 871
TauI GCSGC 1 cut(s) 1298
TfiI GAWTC 5 cut(s) 68, 130, 1422, 1574, 1627
Tru1I TTAA 3 cut(s) 804, 1389, 1602
Tru9I TTAA 3 cut(s) 804, 1389, 1602
TscAI CASTG 2 cut(s) 805, 1156
TseFI GTSAC 3 cut(s) 354, 756, 1661
TseI GCWGC 9 cut(s) 539, 542, 630, 768, 929, 932, 1067, 1315, 1376
Tsp45I GTSAC 3 cut(s) 354, 756, 1661
TspGWI ACGGA 3 cut(s) 197, 1115, 1680
TspRI CASTG 2 cut(s) 805, 1156
VpaK11BI GGWCC 3 cut(s) 200, 1613, 1688
XagI CCTNNNNNAGG 1 cut(s) 751
XapI RAATTY 1 cut(s) 245
XcmI CCANNNNNNNNNTGG 2 cut(s) 1199, 1556
XhoI CTCGAG 1 cut(s) 1783
XmnI GAANNNNTTC 2 cut(s) 92, 1507
XspI CTAG 1 cut(s) 750
ZrmI AGTACT 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.