Prupe.1G416200_v2.0.a1

Clathrin interactor EPSIN

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
36139244 .. 36144041
4798 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G416200.2

Sequence Viewer

Length: 1749 bp
ATGGATTTCATGAAGGTCTTCGATCAAACGGTCCGAGAAATAAAGAGGGAGGTGAATCTGAAGGTCTTGAAGGTTCCGGAGATGGAACAGAAGGTATTGGATGCAACGGATAATGAACCTTGGGGTCCTCATGGATCTGCATTGGCAGAGATCGCACAGGCCACAAAAAAATTTTCGGAATGTCAGATGGTTATGAATGTTTTGTGGACAAGATTGACTGAGACAGGAAAAGATTGGCGTTATGTCTATAAGGCATTGGCTGTTATAGAATATTTGGTGTCACATGGATCTGAACGAGCTGTGGATGACATTATAGAACATACTTTCCAAATCTCAGCTCTCACAAGTTTTGAATATGTTGAGCCAAATGGGAAGGATTTGGGAATAAATGTGAGGAAGAAGGCGGAAACCATTGTGGCTCTTTTAAATAACAAAGATAAAATACAAGAAGTTAGAAATAAAGCTGCTGCGAATCGTGACAAGTACTTTGGACTTTCATCTACTGGGATAACATATAAGTCAGGTTCTGCAACTTCAGCCTCATTTAGTAGTAGCAGCTATCAGAGTAGCGAACGCTATGGAGGTCTAAGTGGTACTGGAGCTGGTGATAGGTTCAAAGATAGCTATAGAGACAGGGATCGACATGAAGAAGACAAGATTGAGAAGGACAGCTCTAGCAGGTCACGTCGAGAGAGCTCTTCAAAGAAGGCCTCAGCACGCTATGGCAGCAGGAAGGATCAGGATAATATATCATCCAGTGTGTCAAAGTCATCTAATAAATCAAATGACTCTGAGAAGTACAGTTCAGTTCATACTCAAAGCGCAAATGTTCCTGATGACGATGATGATGATTTTGATCCCCGAGGGACTTCTGCTGCTAAGGCTGCTGTTGCAAGCTCAAACCAAGTGGATCTGTTTGGACAAAGTTTGATGGATGACTTCATAGATGCTCCAACATCTGTTCCTGCAGAAAAGCCTGGGATTAACAGCAGTTCATCAGAGGTTGATCTATTTGCTGATGCAACTTTTGTGTCAGCACCACCCCAGGCAGAAACTGGAGCATTTGCAGACTCAACTTTTGTATCAGCACCACCCCAGACAGCAAATGGAGCAAGTTCTCAAACTCAGAATGGTGTTGATCTATTTGCTTCTCAACCAACCCTTTCTCCATTGGCTTCTTCAACAGTAGATCTTTTTTCCGCCCCTGATCCAGTTACGCAGCCAGAAACCAAGTCTACAAATGCTGCCCCAACAAACACCAACATTGTTGATCCCTTTGCCACTGTTCCACTTCACAATTTTGGTGAATCTGATATTTTTGGGGCCTTCACCTCTCAGTCTGATTCAACATCTTCAGAACCTTCCCAAAGTTCTGTCAATGATGGCAGCGACACTAATTTGGGTAAAAAATCTTCAGCAGACCTGAATGGTCCACCCAAGAAGGATTTCCAGGTGAAATCTGGCATTTGGGCCGACTCACTTAGCCGTGGACTGATTGATCTTAATATATCTGCTCCCAAGAAGGTAAATCTGGCGGATGTAGGGATTGTGGGTGGATTGACTGACGGATCAGATGAAAGGGAGAAAGGGCCCCCAACTTCGTATTACATGGGTAGAGCAATGGGTTCCGGGACTGGTCTTGGAAAATCTGGGTTCCCATCATCGCCGGGAATGGGAGGCGATGACATCTTCTCAAGTCTCAGTGGTGGCGGCGGCCAACAATACCAATACGGTGGTTTCCAAAAGTAA

Protein Analysis

583

Amino Acids

62.23

Weight (kDa)

4.95

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 669
AccI GTMKAC 1 cut(s) 1235
AccIII TCCGGA 1 cut(s) 76
AciI CCGC 5 cut(s) 404, 1200, 1535, 1710, 1713
AclWI GGATC 9 cut(s) 142, 295, 645, 744, 851, 918, 1202, 1265, 1576
AcoI YGGCCR 1 cut(s) 1714
AcsI RAATTY 1 cut(s) 170
AcuI CTGAAG 4 cut(s) 80, 519, 1338, 1398
AfaI GTAC 3 cut(s) 485, 595, 800
AfiI CCNNNNNNNGG 1 cut(s) 1673
AgsI TTSAA 6 cut(s) 70, 353, 616, 702, 1182, 1347
AjiI CACGTC 1 cut(s) 686
AjnI CCWGG 3 cut(s) 976, 1044, 1449
AjuI GAANNNNNNNTTGG 2 cut(s) 1430, 1462
AloI GAACNNNNNNTCC 2 cut(s) 309, 341
AluBI AGCT 9 cut(s) 299, 338, 464, 558, 602, 624, 672, 696, 897
AluI AGCT 9 cut(s) 299, 338, 464, 558, 602, 624, 672, 696, 897
Alw21I GWGCWC 1 cut(s) 698
Alw26I GTCTC 3 cut(s) 215, 624, 1703
AlwI GGATC 9 cut(s) 142, 295, 645, 744, 851, 918, 1202, 1265, 1576
AlwNI CAGNNNCTG 2 cut(s) 527, 1055
Ama87I CYCGRG 1 cut(s) 861
Aor13HI TCCGGA 1 cut(s) 76
AoxI GGCC 6 cut(s) 159, 708, 1323, 1470, 1589, 1714
ApaI GGGCCC 1 cut(s) 1593
ApeKI GCWGC 9 cut(s) 464, 467, 555, 726, 875, 884, 1219, 1244, 1386
ApoI RAATTY 1 cut(s) 170
ArsI GACNNNNNNTTYG 4 cut(s) 470, 502, 1061, 1093
Asp700I GAANNNNTTC 2 cut(s) 17, 1445
AspLEI GCGC 1 cut(s) 824
AspS9I GGNCC 7 cut(s) 31, 125, 1323, 1430, 1470, 1589, 1590
AsuC2I CCSGG 2 cut(s) 1630, 1668
AsuHPI GGTGA 5 cut(s) 64, 617, 1316, 1321, 1465
AvaI CYCGRG 1 cut(s) 861
AvaII GGWCC 3 cut(s) 31, 125, 1430
BaeGI GKGCMC 1 cut(s) 1593
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanII GRGCYC 2 cut(s) 698, 1593
BarI GAAGNNNNNNTAC 2 cut(s) 1396, 1428
BbsI GAAGAC 2 cut(s) 10, 657
Bbv12I GWGCWC 1 cut(s) 698
BbvCI CCTCAGC 1 cut(s) 712
BbvI GCAGC 9 cut(s) 451, 454, 567, 738, 862, 871, 1231, 1231, 1398
BccI CCATC 5 cut(s) 76, 181, 925, 1376, 1666
BceAI ACGGC 1 cut(s) 1470
BciT130I CCWGG 3 cut(s) 978, 1046, 1451
BcnI CCSGG 2 cut(s) 1630, 1668
BcoDI GTCTC 3 cut(s) 215, 624, 1703
BfaI CTAG 1 cut(s) 675
BfmI CTRYAG 2 cut(s) 625, 966
BfuAI ACCTGC 1 cut(s) 669
BglII AGATCT 1 cut(s) 1189
BmcAI AGTACT 1 cut(s) 485
Bme1390I CCNGG 5 cut(s) 978, 1046, 1451, 1630, 1668
Bme18I GGWCC 3 cut(s) 31, 125, 1430
BmeT110I CYCGRG 1 cut(s) 861
BmgBI CACGTC 1 cut(s) 686
BmgT120I GGNCC 7 cut(s) 31, 125, 1323, 1430, 1470, 1589, 1590
BmiI GGNNCC 7 cut(s) 75, 126, 1324, 1591, 1592, 1627, 1655
BmrFI CCNGG 5 cut(s) 978, 1046, 1451, 1630, 1668
BmrI ACTGGG 1 cut(s) 513
BmsI GCATC 3 cut(s) 91, 937, 1009
BmuI ACTGGG 1 cut(s) 513
BpiI GAAGAC 2 cut(s) 10, 657
BpmI CTGGAG 2 cut(s) 618, 1077
Bpu10I CCTNAGC 2 cut(s) 712, 879
BpuEI CTTGAG 1 cut(s) 1678
BpuMI CCSGG 2 cut(s) 1630, 1668
BsaBI GATNNNNATC 1 cut(s) 855
BsaJI CCNNGG 5 cut(s) 119, 862, 977, 1044, 1486
BsaWI WCCGGW 1 cut(s) 76
BsaXI ACNNNNNCTCC 2 cut(s) 1150, 1180
Bsc4I CCNNNNNNNGG 1 cut(s) 1673
Bse1I ACTGG 6 cut(s) 508, 601, 756, 1060, 1211, 1639
Bse3DI GCAATG 1 cut(s) 1626
Bse8I GATNNNNATC 1 cut(s) 855
BseAI TCCGGA 1 cut(s) 76
BseBI CCWGG 3 cut(s) 978, 1046, 1451
BseDI CCNNGG 5 cut(s) 119, 862, 977, 1044, 1486
BseGI GGATG 5 cut(s) 106, 310, 752, 940, 1543
BseJI GATNNNNATC 1 cut(s) 855
BseLI CCNNNNNNNGG 1 cut(s) 1673
BseMI GCAATG 1 cut(s) 1626
BseMII CTCAG 7 cut(s) 210, 348, 726, 783, 1139, 1349, 1714
BseNI ACTGG 6 cut(s) 508, 601, 756, 1060, 1211, 1639
BseSI GKGCMC 1 cut(s) 1593
BseXI GCAGC 9 cut(s) 451, 454, 567, 738, 862, 871, 1231, 1231, 1398
BshFI GGCC 6 cut(s) 161, 710, 1325, 1472, 1591, 1716
BsiHKAI GWGCWC 1 cut(s) 698
BsiHKCI CYCGRG 1 cut(s) 861
BsiSI CCGG 3 cut(s) 77, 1629, 1667
BslFI GGGAC 2 cut(s) 880, 1645
BslI CCNNNNNNNGG 1 cut(s) 1673
BsmAI GTCTC 3 cut(s) 215, 624, 1703
BsmFI GGGAC 2 cut(s) 880, 1645
BsnI GGCC 6 cut(s) 161, 710, 1325, 1472, 1591, 1716
BsoBI CYCGRG 1 cut(s) 861
Bsp120I GGGCCC 1 cut(s) 1589
Bsp1286I GDGCHC 2 cut(s) 698, 1593
Bsp13I TCCGGA 1 cut(s) 76
BspACI CCGC 5 cut(s) 404, 1200, 1535, 1710, 1713
BspANI GGCC 6 cut(s) 161, 710, 1325, 1472, 1591, 1716
BspCNI CTCAG 7 cut(s) 211, 347, 725, 784, 1138, 1348, 1713
BspEI TCCGGA 1 cut(s) 76
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 7 cut(s) 75, 126, 1324, 1591, 1592, 1627, 1655
BspMAI CTGCAG 1 cut(s) 970
BspMI ACCTGC 1 cut(s) 669
BspPI GGATC 9 cut(s) 142, 295, 645, 744, 851, 918, 1202, 1265, 1576
BspQI GCTCTTC 1 cut(s) 703
BsrDI GCAATG 1 cut(s) 1626
BsrI ACTGG 6 cut(s) 508, 601, 756, 1060, 1211, 1639
BssECI CCNNGG 5 cut(s) 119, 862, 977, 1044, 1486
BssT1I CCWWGG 1 cut(s) 119
Bst2UI CCWGG 3 cut(s) 978, 1046, 1451
Bst4CI ACNGT 5 cut(s) 31, 803, 1186, 1285, 1733
Bst6I CTCTTC 1 cut(s) 703
BstC8I GCNNGC 2 cut(s) 718, 895
BstDSI CCRYGG 1 cut(s) 1486
BstF5I GGATG 5 cut(s) 106, 310, 752, 940, 1543
BstHHI GCGC 1 cut(s) 824
BstMAI GTCTC 3 cut(s) 215, 624, 1703
BstMWI GCNNNNNNNGC 7 cut(s) 152, 536, 726, 881, 884, 890, 1109
BstNI CCWGG 3 cut(s) 978, 1046, 1451
BstSCI CCNGG 5 cut(s) 976, 1044, 1449, 1628, 1666
BstSFI CTRYAG 2 cut(s) 625, 966
BstSLI GKGCMC 1 cut(s) 1593
BstV1I GCAGC 9 cut(s) 451, 454, 567, 738, 862, 871, 1231, 1231, 1398
BstV2I GAAGAC 2 cut(s) 10, 657
BstX2I RGATCY 4 cut(s) 134, 287, 910, 1189
BstXI CCANNNNNNTGG 1 cut(s) 1733
BstYI RGATCY 4 cut(s) 134, 287, 910, 1189
BsuRI GGCC 6 cut(s) 161, 710, 1325, 1472, 1591, 1716
BtgI CCRYGG 1 cut(s) 1486
BtgZI GCGATG 2 cut(s) 1647, 1695
BtrI CACGTC 1 cut(s) 686
BtsCI GGATG 5 cut(s) 106, 310, 752, 940, 1543
BtsIMutI CAGTG 3 cut(s) 763, 1281, 1708
BveI ACCTGC 1 cut(s) 669
Cac8I GCNNGC 2 cut(s) 718, 895
CaiI CAGNNNCTG 2 cut(s) 527, 1055
CciI TCATGA 1 cut(s) 9
CfoI GCGC 1 cut(s) 824
Cfr13I GGNCC 7 cut(s) 31, 125, 1323, 1430, 1470, 1589, 1590
CpoI CGGWCCG 1 cut(s) 31
Csp6I GTAC 3 cut(s) 484, 594, 799
CspCI CAANNNNNGTGG 2 cut(s) 888, 923
CspI CGGWCCG 1 cut(s) 31
CviAII CATG 5 cut(s) 10, 131, 284, 644, 1609
CviQI GTAC 3 cut(s) 484, 594, 799
DraI TTTAAA 1 cut(s) 426
EaeI YGGCCR 1 cut(s) 1714
Eam1104I CTCTTC 1 cut(s) 703
EarI CTCTTC 1 cut(s) 703
EciI GGCGGA 3 cut(s) 419, 1189, 1550
Ecl136II GAGCTC 1 cut(s) 696
Eco130I CCWWGG 1 cut(s) 119
Eco147I AGGCCT 1 cut(s) 710
Eco24I GRGCYC 2 cut(s) 698, 1593
Eco47I GGWCC 3 cut(s) 31, 125, 1430
Eco53kI GAGCTC 1 cut(s) 696
Eco57I CTGAAG 4 cut(s) 80, 519, 1338, 1398
Eco88I CYCGRG 1 cut(s) 861
EcoICRI GAGCTC 1 cut(s) 696
EcoO109I RGGNCCY 4 cut(s) 125, 1323, 1589, 1590
EcoRII CCWGG 3 cut(s) 976, 1044, 1449
EcoT14I CCWWGG 1 cut(s) 119
EcoT38I GRGCYC 2 cut(s) 698, 1593
ErhI CCWWGG 1 cut(s) 119
FaeI CATG 5 cut(s) 13, 134, 287, 647, 1612
FaqI GGGAC 2 cut(s) 880, 1645
FatI CATG 5 cut(s) 9, 130, 283, 643, 1608
FblI GTMKAC 1 cut(s) 1235
FokI GGATG 5 cut(s) 113, 317, 739, 947, 1550
FriOI GRGCYC 2 cut(s) 698, 1593
FspBI CTAG 1 cut(s) 675
GlaI GCGC 1 cut(s) 823
GsuI CTGGAG 2 cut(s) 618, 1077
HaeIII GGCC 6 cut(s) 161, 710, 1325, 1472, 1591, 1716
HapII CCGG 3 cut(s) 77, 1629, 1667
HhaI GCGC 1 cut(s) 824
Hin1II CATG 5 cut(s) 13, 134, 287, 647, 1612
Hin6I GCGC 1 cut(s) 822
HinP1I GCGC 1 cut(s) 822
HinfI GANTC 7 cut(s) 55, 472, 788, 1070, 1307, 1343, 1475
HpaII CCGG 3 cut(s) 77, 1629, 1667
HphI GGTGA 5 cut(s) 64, 617, 1316, 1321, 1465
Hpy166II GTNNAC 4 cut(s) 207, 1236, 1433, 1490
Hpy188III TCNNGA 7 cut(s) 10, 67, 77, 476, 689, 740, 833
Hpy8I GTNNAC 4 cut(s) 207, 1236, 1433, 1490
Hpy99I CGWCG 1 cut(s) 690
HpyCH4III ACNGT 5 cut(s) 31, 803, 1186, 1285, 1733
HpyCH4IV ACGT 1 cut(s) 685
HpyCH4V TGCA 7 cut(s) 104, 140, 530, 893, 968, 1022, 1067
HpyF10VI GCNNNNNNNGC 7 cut(s) 152, 536, 726, 881, 884, 890, 1109
HpySE526I ACGT 1 cut(s) 685
Hsp92II CATG 5 cut(s) 13, 134, 287, 647, 1612
HspAI GCGC 1 cut(s) 822
Kpn2I TCCGGA 1 cut(s) 76
LguI GCTCTTC 1 cut(s) 703
LmnI GCTCC 5 cut(s) 599, 955, 1058, 1109, 1519
Lsp1109I GCAGC 9 cut(s) 451, 454, 567, 738, 862, 871, 1231, 1231, 1398
LweI GCATC 3 cut(s) 91, 937, 1009
MaeI CTAG 1 cut(s) 675
MaeII ACGT 1 cut(s) 685
MaeIII GTNAC 4 cut(s) 279, 476, 681, 1213
MboII GAAGA 9 cut(s) 10, 409, 659, 662, 690, 1170, 1344, 1404, 1681
MflI RGATCY 4 cut(s) 134, 287, 910, 1189
MhlI GDGCHC 2 cut(s) 698, 1593
MluCI AATT 3 cut(s) 170, 1297, 1396
MlyI GAGTC 3 cut(s) 782, 1064, 1469
MmeI TCCRAC 1 cut(s) 977
MroI TCCGGA 1 cut(s) 76
MroXI GAANNNNTTC 2 cut(s) 17, 1445
MseI TTAA 3 cut(s) 425, 984, 1503
MspI CCGG 3 cut(s) 77, 1629, 1667
MspR9I CCNGG 5 cut(s) 978, 1046, 1451, 1630, 1668
MvaI CCWGG 3 cut(s) 978, 1046, 1451
MwoI GCNNNNNNNGC 7 cut(s) 152, 536, 726, 881, 884, 890, 1109
NciI CCSGG 2 cut(s) 1630, 1668
NlaIII CATG 5 cut(s) 13, 134, 287, 647, 1612
NlaIV GGNNCC 7 cut(s) 75, 126, 1324, 1591, 1592, 1627, 1655
NmuCI GTSAC 3 cut(s) 279, 476, 681
PagI TCATGA 1 cut(s) 9
PceI AGGCCT 1 cut(s) 710
PciSI GCTCTTC 1 cut(s) 703
PdmI GAANNNNTTC 2 cut(s) 17, 1445
PfeI GAWTC 4 cut(s) 55, 472, 1307, 1343
PfoI TCCNGGA 1 cut(s) 1628
PleI GAGTC 3 cut(s) 782, 1064, 1469
PpsI GAGTC 3 cut(s) 782, 1064, 1469
PpuMI RGGWCCY 1 cut(s) 125
Psp124BI GAGCTC 1 cut(s) 698
Psp5II RGGWCCY 1 cut(s) 125
Psp6I CCWGG 3 cut(s) 976, 1044, 1449
PspGI CCWGG 3 cut(s) 976, 1044, 1449
PspN4I GGNNCC 7 cut(s) 75, 126, 1324, 1591, 1592, 1627, 1655
PspOMI GGGCCC 1 cut(s) 1589
PspPI GGNCC 7 cut(s) 31, 125, 1323, 1430, 1470, 1589, 1590
PspPPI RGGWCCY 1 cut(s) 125
PstI CTGCAG 1 cut(s) 970
PstNI CAGNNNCTG 2 cut(s) 527, 1055
PsuI RGATCY 4 cut(s) 134, 287, 910, 1189
RsaI GTAC 3 cut(s) 485, 595, 800
RsaNI GTAC 3 cut(s) 484, 594, 799
Rsr2I CGGWCCG 1 cut(s) 31
RsrII CGGWCCG 1 cut(s) 31
SacI GAGCTC 1 cut(s) 698
SapI GCTCTTC 1 cut(s) 703
SaqAI TTAA 3 cut(s) 425, 984, 1503
Sau96I GGNCC 7 cut(s) 31, 125, 1323, 1430, 1470, 1589, 1590
ScaI AGTACT 1 cut(s) 485
SchI GAGTC 3 cut(s) 782, 1064, 1469
ScrFI CCNGG 5 cut(s) 978, 1046, 1451, 1630, 1668
SduI GDGCHC 2 cut(s) 698, 1593
SfaNI GCATC 3 cut(s) 91, 937, 1009
SfcI CTRYAG 2 cut(s) 625, 966
SinI GGWCC 3 cut(s) 31, 125, 1430
SmlI CTYRAG 1 cut(s) 1693
SmoI CTYRAG 1 cut(s) 1693
Sse9I AATT 3 cut(s) 170, 1297, 1396
SseBI AGGCCT 1 cut(s) 710
SsiI CCGC 5 cut(s) 404, 1200, 1535, 1710, 1713
SspI AATATT 1 cut(s) 272
SspMI CTAG 1 cut(s) 675
SstI GAGCTC 1 cut(s) 698
StuI AGGCCT 1 cut(s) 710
StyD4I CCNGG 5 cut(s) 976, 1044, 1449, 1628, 1666
StyI CCWWGG 1 cut(s) 119
TaaI ACNGT 5 cut(s) 31, 803, 1186, 1285, 1733
TaiI ACGT 1 cut(s) 688
TaqI TCGA 3 cut(s) 21, 640, 688
TasI AATT 3 cut(s) 170, 1297, 1396
TatI WGTACW 2 cut(s) 483, 798
TauI GCSGC 2 cut(s) 1713, 1716
TfiI GAWTC 4 cut(s) 55, 472, 1307, 1343
Tru1I TTAA 3 cut(s) 425, 984, 1503
Tru9I TTAA 3 cut(s) 425, 984, 1503
TscAI CASTG 3 cut(s) 763, 1288, 1708
TseFI GTSAC 3 cut(s) 279, 476, 681
TseI GCWGC 9 cut(s) 464, 467, 555, 726, 875, 884, 1219, 1244, 1386
Tsp45I GTSAC 3 cut(s) 279, 476, 681
TspDTI ATGAA 9 cut(s) 26, 129, 209, 486, 660, 800, 931, 984, 1590
TspGWI ACGGA 2 cut(s) 122, 1581
TspRI CASTG 3 cut(s) 763, 1288, 1708
VpaK11BI GGWCC 3 cut(s) 31, 125, 1430
XapI RAATTY 1 cut(s) 170
XcmI CCANNNNNNNNNTGG 3 cut(s) 1052, 1103, 1457
XmiI GTMKAC 1 cut(s) 1235
XmnI GAANNNNTTC 2 cut(s) 17, 1445
XspI CTAG 1 cut(s) 675
ZrmI AGTACT 1 cut(s) 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.