FvH4_2g37380

Zinc finger CCHC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0012293
Physical Location & Seq
Reverse (-)
27251600 .. 27254554
2955 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37380.t1

Sequence Viewer

Length: 1728 bp
ATGGAGGGCGAAGAAGGAGGAGGGATAAGGCTGAGCAAGAGATTCTCAGACAAAGGAGGCGAAGTCGACAACAAAACCAAGTCAGGCACAGCGTGGAGCCACTCGTTCCTGAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAGCAGATCCAGGCCCAGCACCAGCGTCGCTCCGAAGAAGTCTCCCGCGAGTTCGCGCAAGAGCAGGAGTTCTTTCGCCAGGCAGCCCTAATCTCCAAGAAAGATAAAGAAAAGATTGAGACGATGAAAGCTGTTAGCTTCATGTATGTTCGTCCGCCGGGTTACAATGCCGAAAGTGCCAAGGCTGCAGAGCTGGCGGATGAGAGTATGAAAGATGGTCAACAACAAGCACAAACGGATGGTCCTTCTACTTCAATGCCTCCTAGTGGCGAAGAAGCTAAGAAGAAACCAAGGCCTAAGGATGTGTTTGGACGCAGTTTGCCTACTGAACAAGAGTTTGAGGTGTTGAAAAATGCTCCCAGGCTGGAGACTGGTGTCCCTATGAGGGCGAAACCATTTGGAGTTGAAGTGCGCAATGTAAAGTGTGTTAGGTGTGGGACATTTGGTCACCAAAGTGGTGATCGAGAATGTCCATTAAAGGATGCTATAATGCCTAATGAAGAGAGCCGACTGAAAAGGGACGACCCCTTGACTGCCATTCTTGCACATACAGATCCTAGTGAGCCTCTGAAATGGGAACTCAAGCAAAAACCAGGAATTAGTCCTCCTCGTGGAGGGTTTAGGCCAGATGACCCCAACCAACAAATAGTTGCCGAGGAGGATATATTTGATGAGTATGGAGGATTTCTTGGTGAGGATGTCATCCCTGAGTTGCTGGCCAACTTCTCAAGCAAACCCAAGAAGAAATCCAAAAAGAAGACCAAGCGCAAACCAAAGCAGTCCCCTTCCATTAGTGGAGAAGACGGTCTATCTTCTGGCGAGGATGACAAGAGGAGGTCAAAGAAGAAAGTATCCAAGCAAAAGAAAAAGAAGCGTAATCATTCTGAATCGAGCTCACCAGAGATTGATAGACAGAAAGTAAAAAATAAACACAAGGAATCTTATTCATCCAAGGATGTGAATGATGAAAAACACCACAGAAGTACAAAGAACAGACTGAGGCATTCACATTCATATGATGATTCTGACATGGATAGATGGCAGTACAGAATGGACAAGAACAGAGACAGAGACGCTAATTCATCTGGAGATTCTGAGCCTGATAAGAACCAAAGAGGTACCAGACAGAAGCATTCTTACTCATCTGAAGATTCGGATGGTGATCAAAGACATCATAGAAGTACAAAGAATAGACAGAATCAATCTCATTCATATAAAGATTCTGAGATTAGTAGGCGTTATAGAAGGGAGATGAGCCGAGACAGTTCTGCTAATTCATCCGAAGATTCTGAGCCTGACAGGCACCTTCCAAGTGACAAGAGAAGACACCAGAGCAGACACCGGCATTCTTGTTCATCTGAAGATTCTGAGTCCGACAGGCGCCGTACAAGTGACAAGAGAAGACAGCGGAGCAGACACCGGCATTCTTATTCGTCTGAAGATTCTGAGACAGAGAGGCAAAATAGAAGTAGAAGAAGCAGGGATGAGCTTTCCTACTCGTATAATGAGACCAATGTGAAAAGGCATCATAGAAGTAGAAACAGTAGACACAAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04330 map04330
Pfam Domains
Protein Families
Cir_N zf-CCHC_6

Protein Analysis

576

Amino Acids

66.76

Weight (kDa)

9.67

Isoelectric Point (pI)

76.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cir_N PF10197 42 - 77 2.2e-09 N-terminal domain of CBF1 interacting co-repressor CIR
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012293)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19190
fragaria_vesca FvH4_2g37380 FvH4_3g03932
malus_domestica MD08G1001400.v1.1
prunus_persica Prupe.1G353400_v2.0.a1 Prupe.1G353400_v2.0.a1
pyrus_communis pycom08g00080
rosa_chinensis RchiOBHm_Chr6g0304321
rosa_laevigata RLG00000010990
rosa_multiflora Rmu_co8215432.1_g000001 Rmu_ssc0000218.1_g000039
rosa_roxburghii Rroxscaffold_7G00163840
rosa_rugosa Rorug06G0330100 Rorug06G0330200
rosa_samantha Rh6AG443400 Rh6BG459000 Rh6CG456200 Rh6DG442900
rosa_wichuraiana Rw6G038480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 581
Acc65I GGTACC 1 cut(s) 1286
AccB1I GGYRCC 4 cut(s) 126, 1286, 1470, 1548
AccI GTMKAC 2 cut(s) 66, 1714
AccII CGCG 2 cut(s) 216, 224
AciI CCGC 5 cut(s) 154, 214, 323, 365, 1576
AclWI GGATC 3 cut(s) 169, 170, 716
AcoI YGGCCR 1 cut(s) 885
AcuI CTGAAG 3 cut(s) 1335, 1548, 1626
AcyI GRCGYC 1 cut(s) 1549
AdeI CACNNNGTG 1 cut(s) 93
AfaI GTAC 5 cut(s) 1153, 1214, 1288, 1351, 1555
AfiI CCNNNNNNNGG 4 cut(s) 434, 553, 779, 782
AgsI TTSAA 3 cut(s) 423, 517, 575
AhdI GACNNNNNGTC 1 cut(s) 612
AjnI CCWGG 4 cut(s) 177, 246, 527, 760
AleI CACNNNNGTG 1 cut(s) 621
AluBI AGCT 6 cut(s) 299, 306, 361, 446, 1062, 1657
AluI AGCT 6 cut(s) 299, 306, 361, 446, 1062, 1657
Alw21I GWGCWC 1 cut(s) 1064
Alw26I GTCTC 8 cut(s) 214, 281, 530, 1227, 1233, 1422, 1610, 1670
AlwI GGATC 3 cut(s) 169, 170, 716
AoxI GGCC 4 cut(s) 180, 461, 791, 885
ApeKI GCWGC 2 cut(s) 251, 353
ArsI GACNNNNNNTTYG 2 cut(s) 394, 426
Asp718I GGTACC 1 cut(s) 1286
AspLEI GCGC 4 cut(s) 226, 582, 936, 1551
AspS9I GGNCC 2 cut(s) 181, 410
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 5 cut(s) 608, 638, 872, 1056, 1340
AvaII GGWCC 1 cut(s) 410
AxyI CCTNAGG 1 cut(s) 465
BalI TGGCCA 1 cut(s) 887
BanI GGYRCC 4 cut(s) 126, 1286, 1470, 1548
BanII GRGCYC 1 cut(s) 1064
BarI GAAGNNNNNNTAC 2 cut(s) 1289, 1321
BauI CACGAG 1 cut(s) 777
BbsI GAAGAC 4 cut(s) 932, 975, 1498, 1576
Bbv12I GWGCWC 1 cut(s) 1064
BbvI GCAGC 2 cut(s) 263, 340
BccI CCATC 4 cut(s) 377, 401, 1200, 1319
BceAI ACGGC 1 cut(s) 1536
BcgI CGANNNNNNTGC 4 cut(s) 145, 176, 179, 210
BciT130I CCWGG 4 cut(s) 179, 248, 529, 762
BciVI GTATCC 1 cut(s) 1030
BclI TGATCA 1 cut(s) 1330
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 8 cut(s) 214, 281, 530, 1227, 1233, 1422, 1610, 1670
BfaI CTAG 3 cut(s) 432, 726, 1726
BfmI CTRYAG 1 cut(s) 354
BfoI RGCGCY 1 cut(s) 1552
BfuI GTATCC 1 cut(s) 1030
BglI GCCNNNNNGGC 1 cut(s) 1468
BisI GCNGC 3 cut(s) 154, 252, 354
BlpI GCTNAGC 1 cut(s) 32
BlsI GCNGC 3 cut(s) 155, 253, 355
Bme1390I CCNGG 5 cut(s) 179, 248, 327, 529, 762
Bme18I GGWCC 1 cut(s) 410
BmeRI GACNNNNNGTC 1 cut(s) 612
BmgT120I GGNCC 2 cut(s) 181, 410
BmiI GGNNCC 5 cut(s) 98, 128, 1288, 1472, 1550
BmrFI CCNGG 5 cut(s) 179, 248, 327, 529, 762
BmsI GCATC 2 cut(s) 640, 1702
BoxI GACNNNNGTC 1 cut(s) 542
BpiI GAAGAC 4 cut(s) 932, 975, 1498, 1576
BpmI CTGGAG 2 cut(s) 554, 1275
Bpu1102I GCTNAGC 1 cut(s) 32
BpuEI CTTGAG 2 cut(s) 734, 880
BpuMI CCSGG 1 cut(s) 327
BsaBI GATNNNNATC 1 cut(s) 1329
BsaHI GRCGYC 1 cut(s) 1549
BsaI GGTCTC 1 cut(s) 1670
BsaJI CCNNGG 6 cut(s) 122, 348, 458, 527, 822, 1119
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 561, 591
Bsc4I CCNNNNNNNGG 4 cut(s) 434, 553, 779, 782
Bse118I RCCGGY 2 cut(s) 1509, 1587
Bse1I ACTGG 1 cut(s) 544
Bse21I CCTNAGG 1 cut(s) 465
Bse3DI GCAATG 1 cut(s) 589
Bse8I GATNNNNATC 1 cut(s) 1329
BseBI CCWGG 4 cut(s) 179, 248, 529, 762
BseDI CCNNGG 6 cut(s) 122, 348, 458, 527, 822, 1119
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 4 cut(s) 434, 553, 779, 782
BseMI GCAATG 1 cut(s) 589
BseMII CTCAG 9 cut(s) 23, 60, 867, 1157, 1254, 1383, 1449, 1527, 1605
BseNI ACTGG 1 cut(s) 544
BseRI GAGGAG 4 cut(s) 33, 765, 839, 1015
BseXI GCAGC 2 cut(s) 263, 340
BseYI CCCAGC 1 cut(s) 183
Bsh1236I CGCG 2 cut(s) 216, 224
BshFI GGCC 4 cut(s) 182, 463, 793, 887
BshNI GGYRCC 4 cut(s) 126, 1286, 1470, 1548
BsiHKAI GWGCWC 1 cut(s) 1064
BsiSI CCGG 3 cut(s) 326, 1510, 1588
BslFI GGGAC 4 cut(s) 530, 619, 701, 934
BslI CCNNNNNNNGG 4 cut(s) 434, 553, 779, 782
BsmAI GTCTC 8 cut(s) 214, 281, 530, 1227, 1233, 1422, 1610, 1670
BsmBI CGTCTC 2 cut(s) 281, 1233
BsmFI GGGAC 4 cut(s) 530, 619, 701, 934
BsmI GAATGC 4 cut(s) 1171, 1300, 1513, 1591
BsnI GGCC 4 cut(s) 182, 463, 793, 887
Bso31I GGTCTC 1 cut(s) 1670
Bsp1286I GDGCHC 1 cut(s) 1064
Bsp143I GATC 5 cut(s) 162, 174, 628, 721, 1330
Bsp1720I GCTNAGC 1 cut(s) 32
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 5 cut(s) 154, 214, 323, 365, 1576
BspANI GGCC 4 cut(s) 182, 463, 793, 887
BspCNI CTCAG 9 cut(s) 24, 59, 868, 1158, 1255, 1384, 1450, 1528, 1606
BspFNI CGCG 2 cut(s) 216, 224
BspLI GGNNCC 5 cut(s) 98, 128, 1288, 1472, 1550
BspMAI CTGCAG 1 cut(s) 358
BspPI GGATC 3 cut(s) 169, 170, 716
BspT107I GGYRCC 4 cut(s) 126, 1286, 1470, 1548
BspTNI GGTCTC 1 cut(s) 1670
BsrDI GCAATG 1 cut(s) 589
BsrFI RCCGGY 2 cut(s) 1509, 1587
BsrI ACTGG 1 cut(s) 544
BssAI RCCGGY 2 cut(s) 1509, 1587
BssECI CCNNGG 6 cut(s) 122, 348, 458, 527, 822, 1119
BssMI GATC 5 cut(s) 162, 174, 628, 721, 1330
BssNI GRCGYC 1 cut(s) 1549
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 4 cut(s) 122, 348, 458, 1119
Bst2BI CACGAG 1 cut(s) 777
Bst2UI CCWGG 4 cut(s) 179, 248, 529, 762
Bst4CI ACNGT 3 cut(s) 974, 1433, 1712
Bst6I CTCTTC 1 cut(s) 663
BstACI GRCGYC 1 cut(s) 1549
BstC8I GCNNGC 2 cut(s) 363, 885
BstDSI CCRYGG 1 cut(s) 122
BstEII GGTNACC 1 cut(s) 614
BstENI CCTNNNNNAGG 1 cut(s) 780
BstFNI CGCG 2 cut(s) 216, 224
BstH2I RGCGCY 1 cut(s) 1552
BstHHI GCGC 4 cut(s) 226, 582, 936, 1551
BstKTI GATC 5 cut(s) 165, 177, 631, 724, 1333
BstMAI GTCTC 8 cut(s) 214, 281, 530, 1227, 1233, 1422, 1610, 1670
BstMBI GATC 5 cut(s) 162, 174, 628, 721, 1330
BstMWI GCNNNNNNNGC 5 cut(s) 344, 353, 362, 710, 1468
BstNI CCWGG 4 cut(s) 179, 248, 529, 762
BstPAI GACNNNNGTC 1 cut(s) 542
BstPI GGTNACC 1 cut(s) 614
BstSCI CCNGG 5 cut(s) 177, 246, 325, 527, 760
BstSFI CTRYAG 1 cut(s) 354
BstUI CGCG 2 cut(s) 216, 224
BstV1I GCAGC 2 cut(s) 263, 340
BstV2I GAAGAC 4 cut(s) 932, 975, 1498, 1576
BstX2I RGATCY 2 cut(s) 174, 721
BstYI RGATCY 2 cut(s) 174, 721
Bsu36I CCTNAGG 1 cut(s) 465
BsuI GTATCC 1 cut(s) 1030
BsuRI GGCC 4 cut(s) 182, 463, 793, 887
BtgI CCRYGG 1 cut(s) 122
Cac8I GCNNGC 2 cut(s) 363, 885
CfoI GCGC 4 cut(s) 226, 582, 936, 1551
Cfr10I RCCGGY 2 cut(s) 1509, 1587
Cfr13I GGNCC 2 cut(s) 181, 410
CseI GACGC 3 cut(s) 182, 489, 1250
Csp6I GTAC 5 cut(s) 1152, 1213, 1287, 1350, 1554
CviAII CATG 3 cut(s) 123, 310, 1198
CviQI GTAC 5 cut(s) 1152, 1213, 1287, 1350, 1554
DinI GGCGCC 1 cut(s) 1550
DpnI GATC 5 cut(s) 164, 176, 630, 723, 1332
DpnII GATC 5 cut(s) 162, 174, 628, 721, 1330
DraIII CACNNNGTG 1 cut(s) 93
DriI GACNNNNNGTC 1 cut(s) 612
EaeI YGGCCR 1 cut(s) 885
Eam1104I CTCTTC 1 cut(s) 663
Eam1105I GACNNNNNGTC 1 cut(s) 612
EarI CTCTTC 1 cut(s) 663
EciI GGCGGA 2 cut(s) 312, 380
Ecl136II GAGCTC 1 cut(s) 1062
Eco130I CCWWGG 4 cut(s) 122, 348, 458, 1119
Eco147I AGGCCT 1 cut(s) 463
Eco24I GRGCYC 1 cut(s) 1064
Eco31I GGTCTC 1 cut(s) 1670
Eco47I GGWCC 1 cut(s) 410
Eco53kI GAGCTC 1 cut(s) 1062
Eco57I CTGAAG 3 cut(s) 1335, 1548, 1626
Eco81I CCTNAGG 1 cut(s) 465
Eco91I GGTNACC 1 cut(s) 614
EcoICRI GAGCTC 1 cut(s) 1062
EcoNI CCTNNNNNAGG 1 cut(s) 780
EcoO65I GGTNACC 1 cut(s) 614
EcoRII CCWGG 4 cut(s) 177, 246, 527, 760
EcoT14I CCWWGG 4 cut(s) 122, 348, 458, 1119
EcoT38I GRGCYC 1 cut(s) 1064
EgeI GGCGCC 1 cut(s) 1550
EheI GGCGCC 1 cut(s) 1550
ErhI CCWWGG 4 cut(s) 122, 348, 458, 1119
Esp3I CGTCTC 2 cut(s) 281, 1233
FaeI CATG 3 cut(s) 126, 313, 1201
FaqI GGGAC 4 cut(s) 530, 619, 701, 934
FatI CATG 3 cut(s) 122, 309, 1197
FauI CCCGC 1 cut(s) 221
FauNDI CATATG 1 cut(s) 1183
FbaI TGATCA 1 cut(s) 1330
FblI GTMKAC 2 cut(s) 66, 1714
Fnu4HI GCNGC 3 cut(s) 154, 252, 354
FriOI GRGCYC 1 cut(s) 1064
Fsp4HI GCNGC 3 cut(s) 154, 252, 354
FspBI CTAG 3 cut(s) 432, 726, 1726
FspI TGCGCA 1 cut(s) 581
GlaI GCGC 4 cut(s) 225, 581, 935, 1550
GluI GCNGC 3 cut(s) 154, 252, 354
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 2 cut(s) 554, 1275
HaeII RGCGCY 1 cut(s) 1552
HaeIII GGCC 4 cut(s) 182, 463, 793, 887
HapII CCGG 3 cut(s) 326, 1510, 1588
HgaI GACGC 3 cut(s) 182, 489, 1250
HhaI GCGC 4 cut(s) 226, 582, 936, 1551
Hin1I GRCGYC 1 cut(s) 1549
Hin1II CATG 3 cut(s) 126, 313, 1201
Hin6I GCGC 4 cut(s) 224, 580, 934, 1549
HinP1I GCGC 4 cut(s) 224, 580, 934, 1549
HincII GTYRAC 2 cut(s) 67, 389
HindII GTYRAC 2 cut(s) 67, 389
HpaII CCGG 3 cut(s) 326, 1510, 1588
HphI GGTGA 5 cut(s) 608, 638, 872, 1056, 1340
Hpy166II GTNNAC 3 cut(s) 67, 389, 1715
Hpy188III TCNNGA 3 cut(s) 109, 632, 1254
Hpy8I GTNNAC 3 cut(s) 67, 389, 1715
Hpy99I CGWCG 1 cut(s) 198
HpyAV CCTTC 5 cut(s) 8, 423, 963, 1407, 1484
HpyCH4III ACNGT 3 cut(s) 974, 1433, 1712
HpyCH4V TGCA 2 cut(s) 356, 713
HpyF10VI GCNNNNNNNGC 5 cut(s) 344, 353, 362, 710, 1468
Hsp92I GRCGYC 1 cut(s) 1549
Hsp92II CATG 3 cut(s) 126, 313, 1201
HspAI GCGC 4 cut(s) 224, 580, 934, 1549
KasI GGCGCC 1 cut(s) 1548
KpnI GGTACC 1 cut(s) 1290
Ksp22I TGATCA 1 cut(s) 1330
Kzo9I GATC 5 cut(s) 162, 174, 628, 721, 1330
LmnI GCTCC 4 cut(s) 96, 203, 529, 1578
Lsp1109I GCAGC 2 cut(s) 263, 340
LweI GCATC 2 cut(s) 640, 1702
MaeI CTAG 3 cut(s) 432, 726, 1726
MaeIII GTNAC 4 cut(s) 329, 614, 1481, 1559
MalI GATC 5 cut(s) 164, 176, 630, 723, 1332
MboI GATC 5 cut(s) 162, 174, 628, 721, 1330
MflI RGATCY 2 cut(s) 174, 721
MhlI GDGCHC 1 cut(s) 1064
MlsI TGGCCA 1 cut(s) 887
MluCI AATT 3 cut(s) 765, 1246, 1441
MluNI TGGCCA 1 cut(s) 887
Mly113I GGCGCC 1 cut(s) 1549
MlyI GAGTC 1 cut(s) 1547
MmeI TCCRAC 1 cut(s) 1566
Mox20I TGGCCA 1 cut(s) 887
MscI TGGCCA 1 cut(s) 887
MseI TTAA 1 cut(s) 644
MslI CAYNNNNRTG 2 cut(s) 621, 1182
Msp20I TGGCCA 1 cut(s) 887
MspA1I CMGCKG 1 cut(s) 1576
MspI CCGG 3 cut(s) 326, 1510, 1588
MspR9I CCNGG 5 cut(s) 179, 248, 327, 529, 762
Mva1269I GAATGC 4 cut(s) 1171, 1300, 1513, 1591
MvaI CCWGG 4 cut(s) 179, 248, 529, 762
MvnI CGCG 2 cut(s) 216, 224
MwoI GCNNNNNNNGC 5 cut(s) 344, 353, 362, 710, 1468
NarI GGCGCC 1 cut(s) 1549
NciI CCSGG 1 cut(s) 327
NcoI CCATGG 1 cut(s) 122
NdeI CATATG 1 cut(s) 1183
NdeII GATC 5 cut(s) 162, 174, 628, 721, 1330
NlaIII CATG 3 cut(s) 126, 313, 1201
NlaIV GGNNCC 5 cut(s) 98, 128, 1288, 1472, 1550
NmeAIII GCCGAG 3 cut(s) 193, 847, 1451
NmuCI GTSAC 3 cut(s) 614, 1481, 1559
NsbI TGCGCA 1 cut(s) 581
OliI CACNNNNGTG 1 cut(s) 621
PceI AGGCCT 1 cut(s) 463
PctI GAATGC 4 cut(s) 1171, 1300, 1513, 1591
PkrI GCNGC 3 cut(s) 155, 253, 355
PleI GAGTC 1 cut(s) 1546
PluTI GGCGCC 1 cut(s) 1552
PpsI GAGTC 1 cut(s) 1546
PshAI GACNNNNGTC 1 cut(s) 542
Psp124BI GAGCTC 1 cut(s) 1064
Psp6I CCWGG 4 cut(s) 177, 246, 527, 760
PspEI GGTNACC 1 cut(s) 614
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 4 cut(s) 177, 246, 527, 760
PspN4I GGNNCC 5 cut(s) 98, 128, 1288, 1472, 1550
PspPI GGNCC 2 cut(s) 181, 410
PstI CTGCAG 1 cut(s) 358
PsuI RGATCY 2 cut(s) 174, 721
RsaI GTAC 5 cut(s) 1153, 1214, 1288, 1351, 1555
RsaNI GTAC 5 cut(s) 1152, 1213, 1287, 1350, 1554
RseI CAYNNNNRTG 2 cut(s) 621, 1182
SacI GAGCTC 1 cut(s) 1064
SalI GTCGAC 1 cut(s) 65
SaqAI TTAA 1 cut(s) 644
SatI GCNGC 3 cut(s) 154, 252, 354
Sau3AI GATC 5 cut(s) 162, 174, 628, 721, 1330
Sau96I GGNCC 2 cut(s) 181, 410
SchI GAGTC 1 cut(s) 1547
ScrFI CCNGG 5 cut(s) 179, 248, 327, 529, 762
SduI GDGCHC 1 cut(s) 1064
SfaNI GCATC 2 cut(s) 640, 1702
SfcI CTRYAG 1 cut(s) 354
SfoI GGCGCC 1 cut(s) 1550
SinI GGWCC 1 cut(s) 410
SmiMI CAYNNNNRTG 2 cut(s) 621, 1182
SmlI CTYRAG 2 cut(s) 749, 895
SmoI CTYRAG 2 cut(s) 749, 895
Sse9I AATT 3 cut(s) 765, 1246, 1441
SseBI AGGCCT 1 cut(s) 463
SsiI CCGC 5 cut(s) 154, 214, 323, 365, 1576
SspDI GGCGCC 1 cut(s) 1548
SspMI CTAG 3 cut(s) 432, 726, 1726
SstI GAGCTC 1 cut(s) 1064
StuI AGGCCT 1 cut(s) 463
StyD4I CCNGG 5 cut(s) 177, 246, 325, 527, 760
StyI CCWWGG 4 cut(s) 122, 348, 458, 1119
TaaI ACNGT 3 cut(s) 974, 1433, 1712
TaqI TCGA 3 cut(s) 66, 631, 1058
TasI AATT 3 cut(s) 765, 1246, 1441
TatI WGTACW 3 cut(s) 1151, 1212, 1349
TauI GCSGC 1 cut(s) 156
Tru1I TTAA 1 cut(s) 644
Tru9I TTAA 1 cut(s) 644
TseFI GTSAC 3 cut(s) 614, 1481, 1559
TseI GCWGC 2 cut(s) 251, 353
Tsp45I GTSAC 3 cut(s) 614, 1481, 1559
TspGWI ACGGA 1 cut(s) 419
VpaK11BI GGWCC 1 cut(s) 410
XagI CCTNNNNNAGG 1 cut(s) 780
XmiI GTMKAC 2 cut(s) 66, 1714
XspI CTAG 3 cut(s) 432, 726, 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.