RchiOBHm_Chr6g0304321

Zinc finger CCHC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0012293
Physical Location & Seq
Forward (+)
63660015 .. 63663279
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27342

Sequence Viewer

Length: 1698 bp
ATGGAAGGCGAAGAAGGAGGAGGGATAAGGCTGAGCAAGAGGTTCTCAGACAAAGGAGGCGAAGTCGATAACAAAACCAAGTCAGGGACGGCGTGGAGCCACTCGTACCTGAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAGCAGATCCAGGCCCAGCACCAGCGTCGCTCCGAAGAATATGCGCAAGAGCAGGAGTTCTTTCGGCAGGCAGCTCTCATCTCCAAGAAAGATAAAGAAAAGATTGAGAATATGAAAGCTGTTAGCTTCATGTATGTTCGTCCGCCGGGTTACAATGCCGAGAGTGCCAAAGCTGCAGAGCTTGCCGATGAGAGTATGAGAGATGGTCAACAAACACAAACAGATGGCCCTTCTACTTCAATGCCTCCCAGTGGTGAAGAAGGCAAGAAGAAACCAAGGCCTAAAGATGTATTTGGCCGCAGTTTGCCTACTGAACAAGAGTTTGAAGTGTTGAAAAATGCTCCTAGGCTGGAGACTGGTGTTCCTACGAGGGCAAAACCATTTGGAGTTGAAGTGCGCAATGTAAAGTGTGTCAGGTGTGGAACATTTGGTCACCAAAGCGGTGATCGTGAATGTCCATTGAAGGATGTTATTATGCCTAATGAAGAGAGCCGACTGAAAAGGGACGATCCTTTGACTGCCATTCTTGCACACACAGATCCTAGTGAGCCTCTGAAGTGGGAACTCAAGCAAAAACCAGGAATTAGTCCTCCACGTGGAGGGTTTAGGCCAGATGACCCCAACCAGCAAATAGTTGCGGAGGAGGATATATTTGATGAGTATGGAGGATTTCTCAGTGGGGATGTCATCCCTGAGTTGCTGGCCAACTTCTCGAGCAAACCCAAGAAGAAGTCCAAAAAGAATACCAAGCGCAAAACAAAGCGGTCACCATCCATTAGTGGAGAAGACCAGTCATCTTCTGATGAGGATGACAAGAGGGGGTCAAAGAAGAAAGTATCCAAGCTAAAGAAAAAGAAGCGTAATCATTCTGAATCGAGCTCACCAGAGATTGATAGACATAAAGTAAAGAATAAATACGAGGAATCTTATTCATCCGAGGATTTGAATCATGAAAAACATCACAGAAGTTCAAAGAACAGACCGAAGCATTCTCAATCATTTGAAGATTCCGACATGGACAGGTGGCAGTACAGAAGAGACAAGAACAGAGACAGAGATGCTAATTCATCTGAAGATTCTGAGCCTGGTAAGAACCAAAGAGGTACCAGACTAAGATCTGAGGATTCGGATGGTGAAAAACATCATAGAAGTACAAAGAACAGACAGAGGCACTCTCATTCATATAAAGATTTTGAGATTAATAGGCATTTTAGAAGGGAGAAGAGCAGGGACAGTTGTGCCAATTCATTTGAAGATTCTGAGCCTGATAGGCACCTTCCAAGTGACCAGCGAAGACACCAGAGCAGACACCGACATTCTTATTTATCTGAAGATTCTGAGCCTGATAGGCACCATTCAAGTGACAAGAGAAGACAGTGGAGCAGACACCGGCATTCTTATTTGTCTGAAGATACTGACATAGGCAGGCAGAAAAGAAGTAAAAGAAGCAGGGATGAGCTTACCTATTCATTTAATGAGACCGATGATAAAAGGCATCGTACAAGTAGAAACAGTAGACACAAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04330 map04330
Pfam Domains
Protein Families
Cir_N zf-CCHC_6

Protein Analysis

565

Amino Acids

65.83

Weight (kDa)

9.51

Isoelectric Point (pI)

71.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cir_N PF10197 42 - 74 7.4e-08 N-terminal domain of CBF1 interacting co-repressor CIR
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012293)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19190
fragaria_vesca FvH4_2g37380 FvH4_3g03932
malus_domestica MD08G1001400.v1.1
prunus_persica Prupe.1G353400_v2.0.a1 Prupe.1G353400_v2.0.a1
pyrus_communis pycom08g00080
rosa_chinensis RchiOBHm_Chr6g0304321
rosa_laevigata RLG00000010990
rosa_multiflora Rmu_co8215432.1_g000001 Rmu_ssc0000218.1_g000039
rosa_roxburghii Rroxscaffold_7G00163840
rosa_rugosa Rorug06G0330100 Rorug06G0330200
rosa_samantha Rh6AG443400 Rh6BG459000 Rh6CG456200 Rh6DG442900
rosa_wichuraiana Rw6G038480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 213, 566
Acc65I GGTACC 1 cut(s) 1271
AccB1I GGYRCC 4 cut(s) 126, 1271, 1440, 1518
AccI GTMKAC 1 cut(s) 1684
AciI CCGC 6 cut(s) 154, 311, 466, 609, 806, 931
AclWI GGATC 4 cut(s) 169, 170, 671, 701
AcoI YGGCCR 2 cut(s) 463, 870
AcuI CTGAAG 4 cut(s) 743, 1260, 1518, 1596
AcvI CACGTG 1 cut(s) 764
AfaI GTAC 5 cut(s) 107, 1199, 1273, 1321, 1669
AfiI CCNNNNNNNGG 4 cut(s) 84, 419, 764, 767
AjnI CCWGG 3 cut(s) 177, 745, 1252
AluBI AGCT 8 cut(s) 242, 287, 294, 341, 349, 1012, 1047, 1627
AluI AGCT 8 cut(s) 242, 287, 294, 341, 349, 1012, 1047, 1627
Alw21I GWGCWC 1 cut(s) 1049
Alw26I GTCTC 4 cut(s) 515, 1200, 1212, 1640
AlwI GGATC 4 cut(s) 169, 170, 671, 701
Ama87I CYCGRG 1 cut(s) 880
AoxI GGCC 6 cut(s) 180, 394, 446, 463, 776, 870
ApeKI GCWGC 2 cut(s) 239, 341
AseI ATTAAT 1 cut(s) 1368
Asp718I GGTACC 1 cut(s) 1271
AspA2I CCTAGG 1 cut(s) 512
AspLEI GCGC 3 cut(s) 214, 567, 921
AspS9I GGNCC 2 cut(s) 181, 395
AsuC2I CCSGG 1 cut(s) 315
AsuHPI GGTGA 6 cut(s) 434, 593, 623, 927, 1041, 1313
AvaI CYCGRG 1 cut(s) 880
AvrII CCTAGG 1 cut(s) 512
BalI TGGCCA 1 cut(s) 872
BanI GGYRCC 4 cut(s) 126, 1271, 1440, 1518
BanII GRGCYC 1 cut(s) 1049
BbrPI CACGTG 1 cut(s) 764
BbsI GAAGAC 3 cut(s) 960, 1468, 1546
Bbv12I GWGCWC 1 cut(s) 1049
BbvI GCAGC 2 cut(s) 251, 328
BccI CCATC 4 cut(s) 365, 386, 946, 1292
BceAI ACGGC 1 cut(s) 105
BcgI CGANNNNNNTGC 6 cut(s) 145, 176, 179, 191, 210, 225
BciT130I CCWGG 3 cut(s) 179, 747, 1254
BciVI GTATCC 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 315
BcoDI GTCTC 4 cut(s) 515, 1200, 1212, 1640
BfaI CTAG 3 cut(s) 513, 711, 1696
BfmI CTRYAG 1 cut(s) 342
BfuI GTATCC 1 cut(s) 1015
BglI GCCNNNNNGGC 2 cut(s) 1438, 1516
BglII AGATCT 1 cut(s) 1283
BisI GCNGC 4 cut(s) 154, 240, 342, 466
BlnI CCTAGG 1 cut(s) 512
BlpI GCTNAGC 1 cut(s) 32
BlsI GCNGC 4 cut(s) 155, 241, 343, 467
Bme1390I CCNGG 4 cut(s) 179, 315, 747, 1254
BmeT110I CYCGRG 1 cut(s) 880
BmgT120I GGNCC 2 cut(s) 181, 395
BmiI GGNNCC 5 cut(s) 98, 128, 1273, 1442, 1520
BmrFI CCNGG 4 cut(s) 179, 315, 747, 1254
BmrI ACTGGG 1 cut(s) 411
BmsI GCATC 2 cut(s) 1216, 1672
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 3 cut(s) 960, 1468, 1546
BplI GAGNNNNNCTC 4 cut(s) 825, 857, 1327, 1359
BpmI CTGGAG 1 cut(s) 539
Bpu1102I GCTNAGC 1 cut(s) 32
BpuEI CTTGAG 1 cut(s) 719
BpuMI CCSGG 1 cut(s) 315
BsaAI YACGTR 1 cut(s) 764
BsaBI GATNNNNATC 1 cut(s) 1113
BsaI GGTCTC 1 cut(s) 1640
BsaJI CCNNGG 4 cut(s) 122, 443, 512, 1104
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 546, 576
Bsc4I CCNNNNNNNGG 4 cut(s) 84, 419, 764, 767
Bse118I RCCGGY 1 cut(s) 1557
Bse1I ACTGG 3 cut(s) 417, 529, 958
Bse3DI GCAATG 1 cut(s) 574
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 3 cut(s) 179, 747, 1254
BseDI CCNNGG 4 cut(s) 122, 443, 512, 1104
BseGI GGATG 8 cut(s) 640, 855, 856, 938, 982, 1100, 1303, 1627
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 4 cut(s) 84, 419, 764, 767
BseMI GCAATG 1 cut(s) 574
BseMII CTCAG 8 cut(s) 23, 60, 852, 856, 1239, 1278, 1419, 1497
BseNI ACTGG 3 cut(s) 417, 529, 958
BseRI GAGGAG 2 cut(s) 33, 824
BseXI GCAGC 2 cut(s) 251, 328
BseYI CCCAGC 1 cut(s) 183
BshFI GGCC 6 cut(s) 182, 396, 448, 465, 778, 872
BshNI GGYRCC 4 cut(s) 126, 1271, 1440, 1518
BsiHKAI GWGCWC 1 cut(s) 1049
BsiHKCI CYCGRG 1 cut(s) 880
BsiSI CCGG 2 cut(s) 314, 1558
BslFI GGGAC 3 cut(s) 100, 686, 1412
BslI CCNNNNNNNGG 4 cut(s) 84, 419, 764, 767
BsmAI GTCTC 4 cut(s) 515, 1200, 1212, 1640
BsmFI GGGAC 3 cut(s) 100, 686, 1412
BsmI GAATGC 2 cut(s) 1156, 1561
BsnI GGCC 6 cut(s) 182, 396, 448, 465, 778, 872
Bso31I GGTCTC 1 cut(s) 1640
BsoBI CYCGRG 1 cut(s) 880
Bsp1286I GDGCHC 1 cut(s) 1049
Bsp143I GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
Bsp1720I GCTNAGC 1 cut(s) 32
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 6 cut(s) 154, 311, 466, 609, 806, 931
BspANI GGCC 6 cut(s) 182, 396, 448, 465, 778, 872
BspCNI CTCAG 8 cut(s) 24, 59, 853, 855, 1240, 1279, 1420, 1498
BspHI TCATGA 1 cut(s) 1117
BspLI GGNNCC 5 cut(s) 98, 128, 1273, 1442, 1520
BspMAI CTGCAG 1 cut(s) 346
BspPI GGATC 4 cut(s) 169, 170, 671, 701
BspQI GCTCTTC 1 cut(s) 1385
BspT107I GGYRCC 4 cut(s) 126, 1271, 1440, 1518
BspTNI GGTCTC 1 cut(s) 1640
BsrDI GCAATG 1 cut(s) 574
BsrFI RCCGGY 1 cut(s) 1557
BsrI ACTGG 3 cut(s) 417, 529, 958
BssAI RCCGGY 1 cut(s) 1557
BssECI CCNNGG 4 cut(s) 122, 443, 512, 1104
BssMI GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
BssT1I CCWWGG 3 cut(s) 122, 443, 512
Bst2UI CCWGG 3 cut(s) 179, 747, 1254
Bst4CI ACNGT 3 cut(s) 1403, 1545, 1682
Bst6I CTCTTC 3 cut(s) 648, 1198, 1385
BstAPI GCANNNNNTGC 1 cut(s) 350
BstBAI YACGTR 1 cut(s) 764
BstC8I GCNNGC 4 cut(s) 237, 351, 870, 1595
BstDEI CTNAG 9 cut(s) 32, 46, 842, 861, 1248, 1280, 1287, 1428, 1506
BstDSI CCRYGG 1 cut(s) 122
BstEII GGTNACC 2 cut(s) 599, 933
BstF5I GGATG 8 cut(s) 640, 855, 856, 938, 982, 1100, 1303, 1627
BstHHI GCGC 3 cut(s) 214, 567, 921
BstKTI GATC 6 cut(s) 165, 177, 616, 679, 709, 1286
BstMAI GTCTC 4 cut(s) 515, 1200, 1212, 1640
BstMBI GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
BstMWI GCNNNNNNNGC 6 cut(s) 332, 341, 350, 695, 1438, 1516
BstNI CCWGG 3 cut(s) 179, 747, 1254
BstPI GGTNACC 2 cut(s) 599, 933
BstSCI CCNGG 4 cut(s) 177, 313, 745, 1252
BstSFI CTRYAG 1 cut(s) 342
BstV1I GCAGC 2 cut(s) 251, 328
BstV2I GAAGAC 3 cut(s) 960, 1468, 1546
BstX2I RGATCY 3 cut(s) 174, 706, 1283
BstYI RGATCY 3 cut(s) 174, 706, 1283
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 6 cut(s) 182, 396, 448, 465, 778, 872
BtgI CCRYGG 1 cut(s) 122
BtsCI GGATG 8 cut(s) 640, 855, 856, 938, 982, 1100, 1303, 1627
BtsIMutI CAGTG 3 cut(s) 424, 850, 1550
Cac8I GCNNGC 4 cut(s) 237, 351, 870, 1595
CciI TCATGA 1 cut(s) 1117
CfoI GCGC 3 cut(s) 214, 567, 921
Cfr10I RCCGGY 1 cut(s) 1557
Cfr13I GGNCC 2 cut(s) 181, 395
CseI GACGC 1 cut(s) 182
Csp6I GTAC 5 cut(s) 106, 1198, 1272, 1320, 1668
CviAII CATG 4 cut(s) 123, 298, 1118, 1183
CviQI GTAC 5 cut(s) 106, 1198, 1272, 1320, 1668
DdeI CTNAG 9 cut(s) 32, 46, 842, 861, 1248, 1280, 1287, 1428, 1506
DpnI GATC 6 cut(s) 164, 176, 615, 678, 708, 1285
DpnII GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
EaeI YGGCCR 2 cut(s) 463, 870
Eam1104I CTCTTC 3 cut(s) 648, 1198, 1385
EarI CTCTTC 3 cut(s) 648, 1198, 1385
EciI GGCGGA 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 1047
Eco130I CCWWGG 3 cut(s) 122, 443, 512
Eco147I AGGCCT 1 cut(s) 448
Eco24I GRGCYC 1 cut(s) 1049
Eco31I GGTCTC 1 cut(s) 1640
Eco53kI GAGCTC 1 cut(s) 1047
Eco57I CTGAAG 4 cut(s) 743, 1260, 1518, 1596
Eco72I CACGTG 1 cut(s) 764
Eco88I CYCGRG 1 cut(s) 880
Eco91I GGTNACC 2 cut(s) 599, 933
EcoICRI GAGCTC 1 cut(s) 1047
EcoO65I GGTNACC 2 cut(s) 599, 933
EcoRII CCWGG 3 cut(s) 177, 745, 1252
EcoT14I CCWWGG 3 cut(s) 122, 443, 512
EcoT38I GRGCYC 1 cut(s) 1049
ErhI CCWWGG 3 cut(s) 122, 443, 512
FaeI CATG 4 cut(s) 126, 301, 1121, 1186
FaqI GGGAC 3 cut(s) 100, 686, 1412
FatI CATG 4 cut(s) 122, 297, 1117, 1182
FblI GTMKAC 1 cut(s) 1684
Fnu4HI GCNGC 4 cut(s) 154, 240, 342, 466
FokI GGATG 8 cut(s) 647, 842, 863, 925, 989, 1087, 1310, 1634
FriOI GRGCYC 1 cut(s) 1049
Fsp4HI GCNGC 4 cut(s) 154, 240, 342, 466
FspBI CTAG 3 cut(s) 513, 711, 1696
FspI TGCGCA 2 cut(s) 213, 566
GlaI GCGC 3 cut(s) 213, 566, 920
GluI GCNGC 4 cut(s) 154, 240, 342, 466
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 1 cut(s) 539
HaeIII GGCC 6 cut(s) 182, 396, 448, 465, 778, 872
HapII CCGG 2 cut(s) 314, 1558
HgaI GACGC 1 cut(s) 182
HhaI GCGC 3 cut(s) 214, 567, 921
Hin1II CATG 4 cut(s) 126, 301, 1121, 1186
Hin6I GCGC 3 cut(s) 212, 565, 919
HinP1I GCGC 3 cut(s) 212, 565, 919
HincII GTYRAC 1 cut(s) 377
HindII GTYRAC 1 cut(s) 377
HinfI GANTC 8 cut(s) 1040, 1091, 1114, 1175, 1244, 1292, 1424, 1502
HpaII CCGG 2 cut(s) 314, 1558
HphI GGTGA 6 cut(s) 434, 593, 623, 927, 1041, 1313
Hpy166II GTNNAC 2 cut(s) 377, 1685
Hpy188III TCNNGA 3 cut(s) 617, 880, 1118
Hpy8I GTNNAC 2 cut(s) 377, 1685
Hpy99I CGWCG 1 cut(s) 198
HpyAV CCTTC 6 cut(s) 8, 408, 422, 625, 1377, 1454
HpyCH4III ACNGT 3 cut(s) 1403, 1545, 1682
HpyCH4IV ACGT 1 cut(s) 763
HpyCH4V TGCA 2 cut(s) 344, 698
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 341, 350, 695, 1438, 1516
HpyF3I CTNAG 9 cut(s) 32, 46, 842, 861, 1248, 1280, 1287, 1428, 1506
HpySE526I ACGT 1 cut(s) 763
Hsp92II CATG 4 cut(s) 126, 301, 1121, 1186
HspAI GCGC 3 cut(s) 212, 565, 919
KpnI GGTACC 1 cut(s) 1275
Kzo9I GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
LguI GCTCTTC 1 cut(s) 1385
LmnI GCTCC 4 cut(s) 96, 203, 514, 1548
Lsp1109I GCAGC 2 cut(s) 251, 328
LweI GCATC 2 cut(s) 1216, 1672
MaeI CTAG 3 cut(s) 513, 711, 1696
MaeII ACGT 1 cut(s) 763
MaeIII GTNAC 5 cut(s) 317, 599, 933, 1451, 1529
MalI GATC 6 cut(s) 164, 176, 615, 678, 708, 1285
MboI GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
MflI RGATCY 3 cut(s) 174, 706, 1283
MhlI GDGCHC 1 cut(s) 1049
MlsI TGGCCA 1 cut(s) 872
MluCI AATT 3 cut(s) 750, 1231, 1411
MluNI TGGCCA 1 cut(s) 872
MmeI TCCRAC 1 cut(s) 1203
Mox20I TGGCCA 1 cut(s) 872
MscI TGGCCA 1 cut(s) 872
MseI TTAA 2 cut(s) 1368, 1641
MslI CAYNNNNRTG 1 cut(s) 1527
Msp20I TGGCCA 1 cut(s) 872
MspI CCGG 2 cut(s) 314, 1558
MspR9I CCNGG 4 cut(s) 179, 315, 747, 1254
Mva1269I GAATGC 2 cut(s) 1156, 1561
MvaI CCWGG 3 cut(s) 179, 747, 1254
MwoI GCNNNNNNNGC 6 cut(s) 332, 341, 350, 695, 1438, 1516
NciI CCSGG 1 cut(s) 315
NcoI CCATGG 1 cut(s) 122
NdeII GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
NlaIII CATG 4 cut(s) 126, 301, 1121, 1186
NlaIV GGNNCC 5 cut(s) 98, 128, 1273, 1442, 1520
NmeAIII GCCGAG 2 cut(s) 193, 352
NmuCI GTSAC 4 cut(s) 599, 933, 1451, 1529
NsbI TGCGCA 2 cut(s) 213, 566
PaeR7I CTCGAG 1 cut(s) 880
PagI TCATGA 1 cut(s) 1117
PceI AGGCCT 1 cut(s) 448
PciSI GCTCTTC 1 cut(s) 1385
PctI GAATGC 2 cut(s) 1156, 1561
PfeI GAWTC 8 cut(s) 1040, 1091, 1114, 1175, 1244, 1292, 1424, 1502
PkrI GCNGC 4 cut(s) 155, 241, 343, 467
PmaCI CACGTG 1 cut(s) 764
PmlI CACGTG 1 cut(s) 764
Ppu21I YACGTR 1 cut(s) 764
PshBI ATTAAT 1 cut(s) 1368
Psp124BI GAGCTC 1 cut(s) 1049
Psp6I CCWGG 3 cut(s) 177, 745, 1252
PspCI CACGTG 1 cut(s) 764
PspEI GGTNACC 2 cut(s) 599, 933
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 3 cut(s) 177, 745, 1252
PspN4I GGNNCC 5 cut(s) 98, 128, 1273, 1442, 1520
PspPI GGNCC 2 cut(s) 181, 395
PstI CTGCAG 1 cut(s) 346
PsuI RGATCY 3 cut(s) 174, 706, 1283
RsaI GTAC 5 cut(s) 107, 1199, 1273, 1321, 1669
RsaNI GTAC 5 cut(s) 106, 1198, 1272, 1320, 1668
RseI CAYNNNNRTG 1 cut(s) 1527
SacI GAGCTC 1 cut(s) 1049
SapI GCTCTTC 1 cut(s) 1385
SaqAI TTAA 2 cut(s) 1368, 1641
SatI GCNGC 4 cut(s) 154, 240, 342, 466
Sau3AI GATC 6 cut(s) 162, 174, 613, 676, 706, 1283
Sau96I GGNCC 2 cut(s) 181, 395
ScrFI CCNGG 4 cut(s) 179, 315, 747, 1254
SduI GDGCHC 1 cut(s) 1049
SfaNI GCATC 2 cut(s) 1216, 1672
SfcI CTRYAG 1 cut(s) 342
Sfr274I CTCGAG 1 cut(s) 880
SlaI CTCGAG 1 cut(s) 880
SmiMI CAYNNNNRTG 1 cut(s) 1527
SmlI CTYRAG 2 cut(s) 734, 880
SmoI CTYRAG 2 cut(s) 734, 880
Sse9I AATT 3 cut(s) 750, 1231, 1411
SseBI AGGCCT 1 cut(s) 448
SsiI CCGC 6 cut(s) 154, 311, 466, 609, 806, 931
SspMI CTAG 3 cut(s) 513, 711, 1696
SstI GAGCTC 1 cut(s) 1049
StuI AGGCCT 1 cut(s) 448
StyD4I CCNGG 4 cut(s) 177, 313, 745, 1252
StyI CCWWGG 3 cut(s) 122, 443, 512
TaaI ACNGT 3 cut(s) 1403, 1545, 1682
TaiI ACGT 1 cut(s) 766
TaqI TCGA 3 cut(s) 66, 881, 1043
TaqII GACCGA 2 cut(s) 1165, 1664
TasI AATT 3 cut(s) 750, 1231, 1411
TatI WGTACW 2 cut(s) 1197, 1319
TauI GCSGC 2 cut(s) 156, 468
TfiI GAWTC 8 cut(s) 1040, 1091, 1114, 1175, 1244, 1292, 1424, 1502
Tru1I TTAA 2 cut(s) 1368, 1641
Tru9I TTAA 2 cut(s) 1368, 1641
TscAI CASTG 3 cut(s) 424, 850, 1550
TseFI GTSAC 4 cut(s) 599, 933, 1451, 1529
TseI GCWGC 2 cut(s) 239, 341
Tsp45I GTSAC 4 cut(s) 599, 933, 1451, 1529
TspDTI ATGAA 9 cut(s) 286, 296, 666, 1089, 1134, 1224, 1338, 1404, 1626
TspRI CASTG 3 cut(s) 424, 850, 1550
VspI ATTAAT 1 cut(s) 1368
XhoI CTCGAG 1 cut(s) 880
XmaJI CCTAGG 1 cut(s) 512
XmiI GTMKAC 1 cut(s) 1684
XspI CTAG 3 cut(s) 513, 711, 1696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.