Zinc finger CCHC domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19190 |
| fragaria_vesca | FvH4_2g37380 FvH4_3g03932 |
| malus_domestica | MD08G1001400.v1.1 |
| prunus_persica | Prupe.1G353400_v2.0.a1 Prupe.1G353400_v2.0.a1 |
| pyrus_communis | pycom08g00080 |
| rosa_chinensis | RchiOBHm_Chr6g0304321 |
| rosa_laevigata | RLG00000010990 |
| rosa_multiflora | Rmu_co8215432.1_g000001 Rmu_ssc0000218.1_g000039 |
| rosa_roxburghii | Rroxscaffold_7G00163840 |
| rosa_rugosa | Rorug06G0330100 Rorug06G0330200 |
| rosa_samantha | Rh6AG443400 Rh6BG459000 Rh6CG456200 Rh6DG442900 |
| rosa_wichuraiana | Rw6G038480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 124 |
| AccBSI | CCGCTC | 1 cut(s) | 26 |
| AciI | CCGC | 1 cut(s) | 24 |
| AclWI | GGATC | 1 cut(s) | 123 |
| AcoI | YGGCCR | 1 cut(s) | 165 |
| AcyI | GRCGYC | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 174, 239, 242 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AjnI | CCWGG | 1 cut(s) | 220 |
| AlwI | GGATC | 1 cut(s) | 123 |
| Ama87I | CYCGRG | 1 cut(s) | 155 |
| AoxI | GGCC | 2 cut(s) | 165, 251 |
| AvaI | CYCGRG | 1 cut(s) | 155 |
| BauI | CACGAG | 1 cut(s) | 237 |
| BccI | CCATC | 1 cut(s) | 110 |
| BciT130I | CCWGG | 1 cut(s) | 222 |
| Bme1390I | CCNGG | 1 cut(s) | 222 |
| BmeT110I | CYCGRG | 1 cut(s) | 155 |
| BmrFI | CCNGG | 1 cut(s) | 222 |
| BpuEI | CTTGAG | 1 cut(s) | 194 |
| BsaHI | GRCGYC | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 2 cut(s) | 132, 282 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 174, 239, 242 |
| BseBI | CCWGG | 1 cut(s) | 222 |
| BseDI | CCNNGG | 2 cut(s) | 132, 282 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 174, 239, 242 |
| BseMII | CTCAG | 1 cut(s) | 382 |
| BseRI | GAGGAG | 2 cut(s) | 225, 299 |
| BshFI | GGCC | 2 cut(s) | 167, 253 |
| BsiHKCI | CYCGRG | 1 cut(s) | 155 |
| BsiSI | CCGG | 1 cut(s) | 164 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 174, 239, 242 |
| BsnI | GGCC | 2 cut(s) | 167, 253 |
| BsoBI | CYCGRG | 1 cut(s) | 155 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspACI | CCGC | 1 cut(s) | 24 |
| BspANI | GGCC | 2 cut(s) | 167, 253 |
| BspCNI | CTCAG | 1 cut(s) | 381 |
| BspHI | TCATGA | 1 cut(s) | 124 |
| BspPI | GGATC | 1 cut(s) | 123 |
| BsrBI | CCGCTC | 1 cut(s) | 26 |
| BssECI | CCNNGG | 2 cut(s) | 132, 282 |
| BssMI | GATC | 1 cut(s) | 115 |
| BssNI | GRCGYC | 1 cut(s) | 121 |
| BssSI | CACGAG | 1 cut(s) | 237 |
| Bst2BI | CACGAG | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 1 cut(s) | 70 |
| BstACI | GRCGYC | 1 cut(s) | 121 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 368 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 240 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstNI | CCWGG | 1 cut(s) | 222 |
| BstSCI | CCNGG | 1 cut(s) | 220 |
| BsuRI | GGCC | 2 cut(s) | 167, 253 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| CciI | TCATGA | 1 cut(s) | 124 |
| CviAII | CATG | 2 cut(s) | 125, 413 |
| CviJI | RGCY | 4 cut(s) | 131, 137, 167, 253 |
| CviKI_1 | RGCY | 4 cut(s) | 131, 137, 167, 253 |
| DdeI | CTNAG | 1 cut(s) | 368 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| EaeI | YGGCCR | 1 cut(s) | 165 |
| Eam1104I | CTCTTC | 1 cut(s) | 70 |
| EarI | CTCTTC | 1 cut(s) | 70 |
| Eco88I | CYCGRG | 1 cut(s) | 155 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 240 |
| EcoRII | CCWGG | 1 cut(s) | 220 |
| FaeI | CATG | 2 cut(s) | 128, 416 |
| FaiI | YATR | 8 cut(s) | 96, 126, 151, 191, 293, 306, 333, 414 |
| FatI | CATG | 2 cut(s) | 124, 412 |
| HaeIII | GGCC | 2 cut(s) | 167, 253 |
| HapII | CCGG | 1 cut(s) | 164 |
| Hin1I | GRCGYC | 1 cut(s) | 121 |
| Hin1II | CATG | 2 cut(s) | 128, 416 |
| HinfI | GANTC | 3 cut(s) | 160, 172, 398 |
| HpaII | CCGG | 1 cut(s) | 164 |
| Hpy188I | TCNGA | 2 cut(s) | 18, 198 |
| Hpy188III | TCNNGA | 2 cut(s) | 125, 157 |
| Hpy99I | CGWCG | 2 cut(s) | 12, 123 |
| HpyAV | CCTTC | 2 cut(s) | 70, 92 |
| HpyCH4IV | ACGT | 2 cut(s) | 10, 121 |
| HpyF3I | CTNAG | 1 cut(s) | 368 |
| HpySE526I | ACGT | 2 cut(s) | 10, 121 |
| Hsp92I | GRCGYC | 1 cut(s) | 121 |
| Hsp92II | CATG | 2 cut(s) | 128, 416 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LmnI | GCTCC | 2 cut(s) | 4, 354 |
| LpnPI | CCDG | 7 cut(s) | 47, 130, 177, 207, 234, 267, 339 |
| MaeII | ACGT | 2 cut(s) | 10, 121 |
| MalI | GATC | 1 cut(s) | 117 |
| MbiI | CCGCTC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 2 cut(s) | 57, 332 |
| MluCI | AATT | 1 cut(s) | 225 |
| MlyI | GAGTC | 1 cut(s) | 407 |
| MmeI | TCCRAC | 1 cut(s) | 41 |
| MslI | CAYNNNNRTG | 1 cut(s) | 417 |
| MspI | CCGG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 222 |
| MvaI | CCWGG | 1 cut(s) | 222 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 2 cut(s) | 128, 416 |
| NmeAIII | GCCGAG | 2 cut(s) | 113, 307 |
| PaeR7I | CTCGAG | 1 cut(s) | 155 |
| PagI | TCATGA | 1 cut(s) | 124 |
| PfeI | GAWTC | 2 cut(s) | 160, 172 |
| PflFI | GACNNNGTC | 1 cut(s) | 12 |
| PleI | GAGTC | 1 cut(s) | 406 |
| PpsI | GAGTC | 1 cut(s) | 406 |
| Psp6I | CCWGG | 1 cut(s) | 220 |
| PspGI | CCWGG | 1 cut(s) | 220 |
| PsyI | GACNNNGTC | 1 cut(s) | 12 |
| RseI | CAYNNNNRTG | 1 cut(s) | 417 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SchI | GAGTC | 1 cut(s) | 407 |
| ScrFI | CCNGG | 1 cut(s) | 222 |
| SetI | ASST | 6 cut(s) | 13, 36, 84, 124, 156, 328 |
| Sfr274I | CTCGAG | 1 cut(s) | 155 |
| SlaI | CTCGAG | 1 cut(s) | 155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 417 |
| SmlI | CTYRAG | 2 cut(s) | 155, 209 |
| SmoI | CTYRAG | 2 cut(s) | 155, 209 |
| Sse9I | AATT | 1 cut(s) | 225 |
| SsiI | CCGC | 1 cut(s) | 24 |
| StyD4I | CCNGG | 1 cut(s) | 220 |
| TaiI | ACGT | 2 cut(s) | 13, 124 |
| TaqI | TCGA | 2 cut(s) | 118, 156 |
| TasI | AATT | 1 cut(s) | 225 |
| TfiI | GAWTC | 2 cut(s) | 160, 172 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TspDTI | ATGAA | 2 cut(s) | 141, 378 |
| TspRI | CASTG | 1 cut(s) | 190 |
| Tth111I | GACNNNGTC | 1 cut(s) | 12 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 240 |
| XhoI | CTCGAG | 1 cut(s) | 155 |
| ZraI | GACGTC | 1 cut(s) | 122 |