RLG00000010990

Zinc finger CCHC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0012293
Physical Location & Seq
Reverse (-)
5852659 .. 5856122
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010990

Sequence Viewer

Length: 1863 bp
ATGGAGGGCGAAGAAGGAGGAGGGATAAGGCTGAGCAAGAGGTTCTCAGACAAAGGAGGCGAAGTCGATAACAAAACCAAGTCAGGCACAGCGTGGAGCCACTCGTACCTGAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAGCAGATCCAGGCCCAGCACCAGCGTCGCTCCGAAGAAGTCTCCCGCGAGTATGCGCAAGAGCAGGAGTTCTTTCGCCAGGCAGCTCTCATCTCCAAGAAAGATAAAGAAAAGATTGAGACGATGAAAGCTGTTAGCTTCATGTATGTTCGTCCGCCGGGTTACAATGCCGAGAGTGCCAAAGCTGCAGAGCTTGCCGATGAGAGTATGAGAGATGGTCAACAAACACAAACAGATGGCCCTTCTACTTCAATGCCTCCCAGTGCTGAAGAAGGCAAGAAGAAACCAAGGCCTAAAGATGTATTTGGCCGCAGTTTGCCTACTGAACAAGAGTTTGAAGTGTTGAAAAATGCTCCTAGGCTGGAGACTGGTGTTCCTACGAGGGCAAAACCATTTGGAGTTGAAGTGCGCAATGTAAAGTGTGTCAGGTGTGGAACATTTGGTCACCAAAGCGGTGATCGTGAATGTCCATTGAAGGATGTTATTATGCCTAATGAAGAGAGCCGACTGAAAAGGGACGATCCTTTGACTGCCATTCTTGCACACACAGATCCTAGTGAGCCTCTGAAGTGGGAACTCAAGCAAAAACCAGGAATTAGTCCTCCACGTGGAGGATTTAAGCCAGATGACCCCAACCAGCAAATAGTTGCCGAGGAGGATATATTTGATGAGTATGGAGGATTTCTCAGTGGGGATGTCATCCCTGAGTTGCTGGCCAACTTCTCGAGCAAACCCAAGAAGAAGTCCAAAAAGAAGACCAAGCGCAAAACAAAGCAGTCACCATCCATTAGTGGAGAAGACCGATCAACTTCTGATGAGGATGACAAGAGGGGGTCAAAGAAGAAAGTATCCAAGCAAAAGAAAAAGAAGCGTAATCATTCTGAATCGAGCTCACCAGAGATTGATAGACATGAAGTAAAGAATAAAGACAAGGAATCTTATTCATCCGAGGATTTGAATCATGAAAAGCATCACAGAAGTACAAGGAACAGACCGAAGCATTCTCATTCATTTGAAGATTCTGACATGGACAGGTGGCAGTACAGAAGAGACAAGAACAGAGACAGAGATGCTAATTCATCTGAAGATTCTGAGCCTGATAAGAACCAAAGAGGTACCAGACACAAGCATTCTTACTCATCTGAGGATTCAGATGGTGAAAAACATCATAGAAGTACAAAGAACAGAAGAGACAAGAACAGAGACAGAGATGCTAATTCATCTGAAGATTCTGAGCCTGATAAGAACCAAAGAGGTACCAGACACAAGCATTCTTACCCATCTGAGGATTCAGATGGTGAAAAACATCATCGAAGTACAAAGAACAGACAGAGGCACTCTCATTCATATAAAAATTTTGAGATTAATAGGCATTTTAGAAGGGAGAAGAGCAGGGACAGTTGTGCCAATTCATTTGAATATTCTGAGCCTGATAGGCACCTTCCAAGTGATAAGCGAAGACACCAGAGCAGACACCGACATTCCTATTCATCCGAAGATTCTGAGCCTGATAGGCACCATTCAATTGACAAGAGAAGACAGCAGAGCAGATACCGGCATTCTTATTCGTCTGAAGATTCTGACATAGGCAGGCAGAAAAGAAGTAAAAGAAGCAGGGATGAGCCTAGCTATTCATTTAATGAGACTGATGATAAGAGGCATCGTACAAGTAGAAACGGTAGCCACAAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04330 map04330
Pfam Domains
Protein Families
Cir_N zf-CCHC_6

Protein Analysis

621

Amino Acids

72.24

Weight (kDa)

9.5

Isoelectric Point (pI)

68.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cir_N PF10197 42 - 77 6.6e-10 N-terminal domain of CBF1 interacting co-repressor CIR
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012293)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19190
fragaria_vesca FvH4_2g37380 FvH4_3g03932
malus_domestica MD08G1001400.v1.1
prunus_persica Prupe.1G353400_v2.0.a1 Prupe.1G353400_v2.0.a1
pyrus_communis pycom08g00080
rosa_chinensis RchiOBHm_Chr6g0304321
rosa_laevigata RLG00000010990
rosa_multiflora Rmu_co8215432.1_g000001 Rmu_ssc0000218.1_g000039
rosa_roxburghii Rroxscaffold_7G00163840
rosa_rugosa Rorug06G0330100 Rorug06G0330200
rosa_samantha Rh6AG443400 Rh6BG459000 Rh6CG456200 Rh6DG442900
rosa_wichuraiana Rw6G038480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 225, 578
Acc65I GGTACC 2 cut(s) 1283, 1424
AccB1I GGYRCC 5 cut(s) 126, 1283, 1424, 1605, 1683
AccII CGCG 1 cut(s) 216
AciI CCGC 5 cut(s) 154, 214, 323, 478, 621
AclWI GGATC 4 cut(s) 169, 170, 683, 713
AcoI YGGCCR 2 cut(s) 475, 882
AcsI RAATTY 1 cut(s) 1522
AcuI CTGAAG 5 cut(s) 456, 755, 1272, 1413, 1761
AcvI CACGTG 1 cut(s) 776
AdeI CACNNNGTG 1 cut(s) 93
AfaI GTAC 8 cut(s) 107, 1150, 1211, 1285, 1345, 1426, 1486, 1834
AfiI CCNNNNNNNGG 3 cut(s) 776, 779, 1453
AgsI TTSAA 9 cut(s) 420, 506, 514, 572, 643, 1126, 1184, 1586, 1692
AjnI CCWGG 3 cut(s) 177, 246, 757
AluBI AGCT 7 cut(s) 254, 299, 306, 353, 361, 1059, 1797
AluI AGCT 7 cut(s) 254, 299, 306, 353, 361, 1059, 1797
Alw21I GWGCWC 1 cut(s) 1061
Alw26I GTCTC 8 cut(s) 214, 281, 527, 1212, 1224, 1353, 1365, 1805
AlwI GGATC 4 cut(s) 169, 170, 683, 713
Ama87I CYCGRG 1 cut(s) 892
AoxI GGCC 5 cut(s) 180, 406, 458, 475, 882
ApeKI GCWGC 2 cut(s) 251, 353
ApoI RAATTY 1 cut(s) 1522
AseI ATTAAT 1 cut(s) 1533
Asp718I GGTACC 2 cut(s) 1283, 1424
AspA2I CCTAGG 1 cut(s) 524
AspLEI GCGC 3 cut(s) 226, 579, 933
AspS9I GGNCC 2 cut(s) 181, 407
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 6 cut(s) 605, 635, 939, 1053, 1337, 1478
AvaI CYCGRG 1 cut(s) 892
AvrII CCTAGG 1 cut(s) 524
BalI TGGCCA 1 cut(s) 884
BanI GGYRCC 5 cut(s) 126, 1283, 1424, 1605, 1683
BanII GRGCYC 1 cut(s) 1061
BbrPI CACGTG 1 cut(s) 776
BbsI GAAGAC 4 cut(s) 929, 972, 1633, 1711
Bbv12I GWGCWC 1 cut(s) 1061
BbvI GCAGC 2 cut(s) 263, 340
BccI CCATC 6 cut(s) 377, 398, 958, 1316, 1456, 1457
BcgI CGANNNNNNTGC 4 cut(s) 145, 176, 179, 210
BciT130I CCWGG 3 cut(s) 179, 248, 759
BciVI GTATCC 1 cut(s) 1027
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 8 cut(s) 214, 281, 527, 1212, 1224, 1353, 1365, 1805
BfaI CTAG 4 cut(s) 525, 723, 1794, 1861
BfmI CTRYAG 1 cut(s) 354
BfuI GTATCC 1 cut(s) 1027
BglI GCCNNNNNGGC 2 cut(s) 1603, 1681
BisI GCNGC 4 cut(s) 154, 252, 354, 478
BlnI CCTAGG 1 cut(s) 524
BlpI GCTNAGC 1 cut(s) 32
BlsI GCNGC 4 cut(s) 155, 253, 355, 479
Bme1390I CCNGG 4 cut(s) 179, 248, 327, 759
BmeT110I CYCGRG 1 cut(s) 892
BmgT120I GGNCC 2 cut(s) 181, 407
BmiI GGNNCC 6 cut(s) 98, 128, 1285, 1426, 1607, 1685
BmrFI CCNGG 4 cut(s) 179, 248, 327, 759
BmrI ACTGGG 1 cut(s) 423
BmsI GCATC 4 cut(s) 1147, 1228, 1369, 1837
BmuI ACTGGG 1 cut(s) 423
BpiI GAAGAC 4 cut(s) 929, 972, 1633, 1711
BplI GAGNNNNNCTC 4 cut(s) 837, 869, 1492, 1524
BpmI CTGGAG 1 cut(s) 551
Bpu1102I GCTNAGC 1 cut(s) 32
BpuEI CTTGAG 1 cut(s) 731
BpuMI CCSGG 1 cut(s) 327
BsaAI YACGTR 1 cut(s) 776
BsaBI GATNNNNATC 1 cut(s) 1125
BsaJI CCNNGG 5 cut(s) 122, 455, 524, 819, 1116
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 558, 588
Bsc4I CCNNNNNNNGG 3 cut(s) 776, 779, 1453
Bse118I RCCGGY 1 cut(s) 1722
Bse1I ACTGG 2 cut(s) 429, 541
Bse3DI GCAATG 1 cut(s) 586
Bse8I GATNNNNATC 1 cut(s) 1125
BseBI CCWGG 3 cut(s) 179, 248, 759
BseDI CCNNGG 5 cut(s) 122, 455, 524, 819, 1116
BseGI GGATG 8 cut(s) 652, 867, 868, 950, 994, 1112, 1658, 1792
BseJI GATNNNNATC 1 cut(s) 1125
BseLI CCNNNNNNNGG 3 cut(s) 776, 779, 1453
BseMI GCAATG 1 cut(s) 586
BseNI ACTGG 2 cut(s) 429, 541
BseRI GAGGAG 2 cut(s) 33, 836
BseXI GCAGC 2 cut(s) 263, 340
BseYI CCCAGC 1 cut(s) 183
Bsh1236I CGCG 1 cut(s) 216
BshFI GGCC 5 cut(s) 182, 408, 460, 477, 884
BshNI GGYRCC 5 cut(s) 126, 1283, 1424, 1605, 1683
BsiHKAI GWGCWC 1 cut(s) 1061
BsiHKCI CYCGRG 1 cut(s) 892
BsiSI CCGG 2 cut(s) 326, 1723
BslFI GGGAC 2 cut(s) 698, 1577
BslI CCNNNNNNNGG 3 cut(s) 776, 779, 1453
BsmAI GTCTC 8 cut(s) 214, 281, 527, 1212, 1224, 1353, 1365, 1805
BsmBI CGTCTC 1 cut(s) 281
BsmFI GGGAC 2 cut(s) 698, 1577
BsmI GAATGC 4 cut(s) 1168, 1297, 1438, 1726
BsnI GGCC 5 cut(s) 182, 408, 460, 477, 884
BsoBI CYCGRG 1 cut(s) 892
Bsp1286I GDGCHC 1 cut(s) 1061
Bsp143I GATC 6 cut(s) 162, 174, 625, 688, 718, 971
Bsp1720I GCTNAGC 1 cut(s) 32
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 5 cut(s) 154, 214, 323, 478, 621
BspANI GGCC 5 cut(s) 182, 408, 460, 477, 884
BspFNI CGCG 1 cut(s) 216
BspHI TCATGA 1 cut(s) 1129
BspLI GGNNCC 6 cut(s) 98, 128, 1285, 1426, 1607, 1685
BspMAI CTGCAG 1 cut(s) 358
BspPI GGATC 4 cut(s) 169, 170, 683, 713
BspQI GCTCTTC 1 cut(s) 1550
BspT107I GGYRCC 5 cut(s) 126, 1283, 1424, 1605, 1683
BsrDI GCAATG 1 cut(s) 586
BsrFI RCCGGY 1 cut(s) 1722
BsrI ACTGG 2 cut(s) 429, 541
BssAI RCCGGY 1 cut(s) 1722
BssECI CCNNGG 5 cut(s) 122, 455, 524, 819, 1116
BssMI GATC 6 cut(s) 162, 174, 625, 688, 718, 971
BssT1I CCWWGG 3 cut(s) 122, 455, 524
Bst2UI CCWGG 3 cut(s) 179, 248, 759
Bst4CI ACNGT 2 cut(s) 1568, 1847
Bst6I CTCTTC 4 cut(s) 660, 1210, 1351, 1550
BstAPI GCANNNNNTGC 1 cut(s) 362
BstBAI YACGTR 1 cut(s) 776
BstC8I GCNNGC 3 cut(s) 363, 882, 1760
BstDSI CCRYGG 1 cut(s) 122
BstEII GGTNACC 1 cut(s) 611
BstF5I GGATG 8 cut(s) 652, 867, 868, 950, 994, 1112, 1658, 1792
BstFNI CGCG 1 cut(s) 216
BstHHI GCGC 3 cut(s) 226, 579, 933
BstKTI GATC 6 cut(s) 165, 177, 628, 691, 721, 974
BstMAI GTCTC 8 cut(s) 214, 281, 527, 1212, 1224, 1353, 1365, 1805
BstMBI GATC 6 cut(s) 162, 174, 625, 688, 718, 971
BstMWI GCNNNNNNNGC 6 cut(s) 344, 353, 362, 707, 1603, 1681
BstNI CCWGG 3 cut(s) 179, 248, 759
BstPI GGTNACC 1 cut(s) 611
BstSCI CCNGG 4 cut(s) 177, 246, 325, 757
BstSFI CTRYAG 1 cut(s) 354
BstUI CGCG 1 cut(s) 216
BstV1I GCAGC 2 cut(s) 263, 340
BstV2I GAAGAC 4 cut(s) 929, 972, 1633, 1711
BstX2I RGATCY 2 cut(s) 174, 718
BstYI RGATCY 2 cut(s) 174, 718
BsuI GTATCC 1 cut(s) 1027
BsuRI GGCC 5 cut(s) 182, 408, 460, 477, 884
BtgI CCRYGG 1 cut(s) 122
BtsCI GGATG 8 cut(s) 652, 867, 868, 950, 994, 1112, 1658, 1792
BtsIMutI CAGTG 2 cut(s) 436, 862
Cac8I GCNNGC 3 cut(s) 363, 882, 1760
CciI TCATGA 1 cut(s) 1129
CfoI GCGC 3 cut(s) 226, 579, 933
Cfr10I RCCGGY 1 cut(s) 1722
Cfr13I GGNCC 2 cut(s) 181, 407
CseI GACGC 1 cut(s) 182
Csp6I GTAC 8 cut(s) 106, 1149, 1210, 1284, 1344, 1425, 1485, 1833
CviAII CATG 5 cut(s) 123, 310, 1079, 1130, 1195
CviQI GTAC 8 cut(s) 106, 1149, 1210, 1284, 1344, 1425, 1485, 1833
DpnI GATC 6 cut(s) 164, 176, 627, 690, 720, 973
DpnII GATC 6 cut(s) 162, 174, 625, 688, 718, 971
DraIII CACNNNGTG 1 cut(s) 93
EaeI YGGCCR 2 cut(s) 475, 882
Eam1104I CTCTTC 4 cut(s) 660, 1210, 1351, 1550
EarI CTCTTC 4 cut(s) 660, 1210, 1351, 1550
EciI GGCGGA 1 cut(s) 312
Ecl136II GAGCTC 1 cut(s) 1059
Eco130I CCWWGG 3 cut(s) 122, 455, 524
Eco147I AGGCCT 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 1061
Eco53kI GAGCTC 1 cut(s) 1059
Eco57I CTGAAG 5 cut(s) 456, 755, 1272, 1413, 1761
Eco72I CACGTG 1 cut(s) 776
Eco88I CYCGRG 1 cut(s) 892
Eco91I GGTNACC 1 cut(s) 611
EcoICRI GAGCTC 1 cut(s) 1059
EcoO65I GGTNACC 1 cut(s) 611
EcoRII CCWGG 3 cut(s) 177, 246, 757
EcoT14I CCWWGG 3 cut(s) 122, 455, 524
EcoT38I GRGCYC 1 cut(s) 1061
ErhI CCWWGG 3 cut(s) 122, 455, 524
Esp3I CGTCTC 1 cut(s) 281
FaeI CATG 5 cut(s) 126, 313, 1082, 1133, 1198
FaqI GGGAC 2 cut(s) 698, 1577
FatI CATG 5 cut(s) 122, 309, 1078, 1129, 1194
FauI CCCGC 1 cut(s) 221
Fnu4HI GCNGC 4 cut(s) 154, 252, 354, 478
FokI GGATG 8 cut(s) 659, 854, 875, 937, 1001, 1099, 1645, 1799
FriOI GRGCYC 1 cut(s) 1061
Fsp4HI GCNGC 4 cut(s) 154, 252, 354, 478
FspBI CTAG 4 cut(s) 525, 723, 1794, 1861
FspI TGCGCA 2 cut(s) 225, 578
GlaI GCGC 3 cut(s) 225, 578, 932
GluI GCNGC 4 cut(s) 154, 252, 354, 478
GsaI CCCAGC 1 cut(s) 187
GsuI CTGGAG 1 cut(s) 551
HaeIII GGCC 5 cut(s) 182, 408, 460, 477, 884
HapII CCGG 2 cut(s) 326, 1723
HgaI GACGC 1 cut(s) 182
HhaI GCGC 3 cut(s) 226, 579, 933
Hin1II CATG 5 cut(s) 126, 313, 1082, 1133, 1198
Hin6I GCGC 3 cut(s) 224, 577, 931
HinP1I GCGC 3 cut(s) 224, 577, 931
HincII GTYRAC 1 cut(s) 389
HindII GTYRAC 1 cut(s) 389
HpaII CCGG 2 cut(s) 326, 1723
HphI GGTGA 6 cut(s) 605, 635, 939, 1053, 1337, 1478
Hpy166II GTNNAC 1 cut(s) 389
Hpy188III TCNNGA 3 cut(s) 629, 892, 1130
Hpy8I GTNNAC 1 cut(s) 389
Hpy99I CGWCG 1 cut(s) 198
HpyAV CCTTC 6 cut(s) 8, 420, 434, 637, 1542, 1619
HpyCH4III ACNGT 2 cut(s) 1568, 1847
HpyCH4IV ACGT 1 cut(s) 775
HpyCH4V TGCA 2 cut(s) 356, 710
HpyF10VI GCNNNNNNNGC 6 cut(s) 344, 353, 362, 707, 1603, 1681
HpySE526I ACGT 1 cut(s) 775
Hsp92II CATG 5 cut(s) 126, 313, 1082, 1133, 1198
HspAI GCGC 3 cut(s) 224, 577, 931
KpnI GGTACC 2 cut(s) 1287, 1428
Kzo9I GATC 6 cut(s) 162, 174, 625, 688, 718, 971
LguI GCTCTTC 1 cut(s) 1550
LmnI GCTCC 3 cut(s) 96, 203, 526
Lsp1109I GCAGC 2 cut(s) 263, 340
LweI GCATC 4 cut(s) 1147, 1228, 1369, 1837
MaeI CTAG 4 cut(s) 525, 723, 1794, 1861
MaeII ACGT 1 cut(s) 775
MaeIII GTNAC 3 cut(s) 329, 611, 945
MalI GATC 6 cut(s) 164, 176, 627, 690, 720, 973
MboI GATC 6 cut(s) 162, 174, 625, 688, 718, 971
MfeI CAATTG 1 cut(s) 1692
MflI RGATCY 2 cut(s) 174, 718
MhlI GDGCHC 1 cut(s) 1061
MlsI TGGCCA 1 cut(s) 884
MluCI AATT 6 cut(s) 762, 1243, 1384, 1522, 1576, 1692
MluNI TGGCCA 1 cut(s) 884
Mox20I TGGCCA 1 cut(s) 884
MscI TGGCCA 1 cut(s) 884
MseI TTAA 3 cut(s) 786, 1533, 1806
Msp20I TGGCCA 1 cut(s) 884
MspI CCGG 2 cut(s) 326, 1723
MspR9I CCNGG 4 cut(s) 179, 248, 327, 759
MunI CAATTG 1 cut(s) 1692
Mva1269I GAATGC 4 cut(s) 1168, 1297, 1438, 1726
MvaI CCWGG 3 cut(s) 179, 248, 759
MvnI CGCG 1 cut(s) 216
MwoI GCNNNNNNNGC 6 cut(s) 344, 353, 362, 707, 1603, 1681
NciI CCSGG 1 cut(s) 327
NcoI CCATGG 1 cut(s) 122
NdeII GATC 6 cut(s) 162, 174, 625, 688, 718, 971
NlaIII CATG 5 cut(s) 126, 313, 1082, 1133, 1198
NlaIV GGNNCC 6 cut(s) 98, 128, 1285, 1426, 1607, 1685
NmeAIII GCCGAG 3 cut(s) 193, 364, 844
NmuCI GTSAC 2 cut(s) 611, 945
NsbI TGCGCA 2 cut(s) 225, 578
PaeR7I CTCGAG 1 cut(s) 892
PagI TCATGA 1 cut(s) 1129
PceI AGGCCT 1 cut(s) 460
PciSI GCTCTTC 1 cut(s) 1550
PctI GAATGC 4 cut(s) 1168, 1297, 1438, 1726
PkrI GCNGC 4 cut(s) 155, 253, 355, 479
PmaCI CACGTG 1 cut(s) 776
PmlI CACGTG 1 cut(s) 776
Ppu21I YACGTR 1 cut(s) 776
PshBI ATTAAT 1 cut(s) 1533
Psp124BI GAGCTC 1 cut(s) 1061
Psp6I CCWGG 3 cut(s) 177, 246, 757
PspCI CACGTG 1 cut(s) 776
PspEI GGTNACC 1 cut(s) 611
PspFI CCCAGC 1 cut(s) 183
PspGI CCWGG 3 cut(s) 177, 246, 757
PspN4I GGNNCC 6 cut(s) 98, 128, 1285, 1426, 1607, 1685
PspPI GGNCC 2 cut(s) 181, 407
PstI CTGCAG 1 cut(s) 358
PsuI RGATCY 2 cut(s) 174, 718
RsaI GTAC 8 cut(s) 107, 1150, 1211, 1285, 1345, 1426, 1486, 1834
RsaNI GTAC 8 cut(s) 106, 1149, 1210, 1284, 1344, 1425, 1485, 1833
SacI GAGCTC 1 cut(s) 1061
SapI GCTCTTC 1 cut(s) 1550
SaqAI TTAA 3 cut(s) 786, 1533, 1806
SatI GCNGC 4 cut(s) 154, 252, 354, 478
Sau3AI GATC 6 cut(s) 162, 174, 625, 688, 718, 971
Sau96I GGNCC 2 cut(s) 181, 407
ScrFI CCNGG 4 cut(s) 179, 248, 327, 759
SduI GDGCHC 1 cut(s) 1061
SfaNI GCATC 4 cut(s) 1147, 1228, 1369, 1837
SfcI CTRYAG 1 cut(s) 354
Sfr274I CTCGAG 1 cut(s) 892
SlaI CTCGAG 1 cut(s) 892
SmlI CTYRAG 2 cut(s) 746, 892
SmoI CTYRAG 2 cut(s) 746, 892
Sse9I AATT 6 cut(s) 762, 1243, 1384, 1522, 1576, 1692
SseBI AGGCCT 1 cut(s) 460
SsiI CCGC 5 cut(s) 154, 214, 323, 478, 621
SspI AATATT 1 cut(s) 1589
SspMI CTAG 4 cut(s) 525, 723, 1794, 1861
SstI GAGCTC 1 cut(s) 1061
StuI AGGCCT 1 cut(s) 460
StyD4I CCNGG 4 cut(s) 177, 246, 325, 757
StyI CCWWGG 3 cut(s) 122, 455, 524
TaaI ACNGT 2 cut(s) 1568, 1847
TaiI ACGT 1 cut(s) 778
TaqI TCGA 4 cut(s) 66, 893, 1055, 1480
TaqII GACCGA 2 cut(s) 984, 1177
TasI AATT 6 cut(s) 762, 1243, 1384, 1522, 1576, 1692
TatI WGTACW 4 cut(s) 1148, 1209, 1343, 1484
TauI GCSGC 2 cut(s) 156, 480
Tru1I TTAA 3 cut(s) 786, 1533, 1806
Tru9I TTAA 3 cut(s) 786, 1533, 1806
TscAI CASTG 2 cut(s) 436, 862
TseFI GTSAC 2 cut(s) 611, 945
TseI GCWGC 2 cut(s) 251, 353
Tsp45I GTSAC 2 cut(s) 611, 945
TspRI CASTG 2 cut(s) 436, 862
VspI ATTAAT 1 cut(s) 1533
XapI RAATTY 1 cut(s) 1522
XhoI CTCGAG 1 cut(s) 892
XmaJI CCTAGG 1 cut(s) 524
XspI CTAG 4 cut(s) 525, 723, 1794, 1861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.