Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

27379410 .. 27381785

Gene Structure 2376 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g37680.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGAAACAGCAGACCAACCCCAAAACCCTTCCGATAACCTAAACGACGTCGTCTCCGGCGTTTCCTCGCCGGAAACTGACTCATCGAGCCCTCAGGAAACCAACCAAAACCATTCCTCGGCACCTCCTCAGGAAGCGCCGATCTCGGACTCCCAAGACGACTCCTCCGAGCCCATCGCTGAAGACACGCCTAATGAACCGCCTCAAAACCCTACCGGACCGGGTCCGGCGGAAACCACCGGCCTGCCGCCAAAACGACGCCGTCGGAGGAAGAAGTTCTTCACGGAGCTCATCGGCACTCCGTCGATGGCCAAGAGCCGCCGCACCGACCTGAACAAGGAGGTCGACACCGAAGCGCTGATAGCGCTCTCGGTAGGGTTTCCGGTGGACTCGCTCACGGAGGAGGAGATCGAGGCCAACGTGGTCCCCGTCATCGGCGGAGTTGAGCAGGCCAACTACATCGTCGTCCGGAACCACATTCTGTCCAGGTGGCGGTCCAACGTGTCGTTCTGGCTGACCAGGGAGATGGCGCTGGAGTCGATTCGGCTGGAGCATAAAGCATTGGTGGACAAAGCTTACAATTTTCTGGTGGAGCATGGCTACATAAACTTCGGGTTAGCTCCGGCGATTAGAGATGCGAAATTGAGGTCGTTTGATGGCTCCGAGAGGGGCAATGTGGTCATTGTGGGAGCCGGTTTGGCCGGCTTGGTGGCGGCGAGGCAGTTGGTGTTTTTGGGGTTTAAAGTTGTGGTGTTGGAAGGGAGGAGTAGGCCTGGAGGGAGAGTGAAGACGAAGAAAATGAGAGGGGAGGGATTGGAGGCTGCAGCTGATCTCGGTGGGAGTGTCCTCACCGGAATAAATGGGAATCCGCTAGGGGTTCTAGCTCGGCAACTGGAGCTGCCTCTGCATAAGGTGAGGGACCTTTGCCCGCTTTATTTACCAGATGGAAAATCGGTGAATTCTGAGATGGATGATAGAATAGAGGCTTCGTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGGCATGCAATGATTGAGGAAGTGAAGTCTGTGGACGTTCCGTTAGGGACTGCGCTGGAGGCTTTTCGAAGAGTGTGTAGTGTGGCTCAGAATCCACAGGAGAGAATGCTCTTGGATTGGCATCTAGCTAATTTGGAATATGCAAATGCCACCTTGATGTCTAATTTGTCAATGGCGTATTGGGATCAGGATGATCCCTATGAGATGGGTGGTGATCATTGTTTTATTCCTGGAGGCAATGAGACTTTTGTGCGAGCCCTTGCAGAGGGTCTTCCAATTTTCTATGATAGGACTGTGCAAAGTATTAGGTATGGAGCTGATGGGGTTTTGGTTTATGCAAATGGCCAGGAGTTTCGAGGGGACATGGTTCTTTGCACTGTGCCATTAGGTGTGCTTAAGAAGGGGTCGATTGAATTTGTCCCAGAGCTTCCACAAAGGAAGAAAGATGCAATTCAGAGTTTGGGATTCGGATTGTTGAATAAAGTGGCCATATTGTTTCCATATAACTTCTGGGGCGGAGATCTTGATACTTTTGGGCATTTGACCGAAGACCCGAGTATGAGAGGCGAGTTCTTTCTGTTTTACAGCTATTCTTCTGTATCAGGAGGTCCTCTTCTGGTTGCACTTGTTGCAGGAGATGCTGCCATTAAGTTTGAGCAGATGTCTCCTTTGGAGTCTGTGAATAGGGTGTTAGAGATACTGAGGGGCATTTTCCACCCTAAAGGTATTGCTGTTCCAGACCCTATTCAGGCAGTGTGTACTCGGTGGGGGAAGGATGACTTCGCATATGGGTCGTATTCATATGTTGCAGTAGGTTCTTCAGGAGACGATTACGATATTCTTGCAGAAAGCATTGGGGATGGGAGAGTATTCTTTGCTGGAGAGGCCACTAATAAGCAGTATCCTGCAACAATGCACGGAGCTTTGCTCAGTGGGATGAGAGAGGCTGCTAACATCCTGAGAGTAGCTAAAAAGAGGACAATAATCCCATCACAGAAATTTAATATTTCTTCCAAGGAAGATGAGGATTTGGATAATTTGTTTGACACCCCTGACTTAACATTTGGGAGCTTCTCCGTTTTGTTTGATCCCAGGTCGTCGGATCCTGAGTCTACATCCTTGTTTAGGGTGAAACTCGGAGGGGAGAAGTTGGACATGGGAAGTTTCAGTCTGTACGGCTTAATTTTGAAGAAGCATACCTTTAAGCTGAGAGATGTAGATGGTGATGGGAACAGGATGACAATGTTGAATTTCGAATTTGGAGTGAGGCTGGTTGGGAGAAAAGGTCTGAGTGGTGTTGCAGAATCTCTTATCGCCTGCATTAGATTAGCTAAATCAGGTATGAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

792

Amino Acids

86.72

Weight (kDa)

5.35

Isoelectric Point (pI)

50.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	130 - 204	6.9e-15	SWIRM domain
NAD_binding_8	PF13450	228 - 287	2.2e-11	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	233 - 661	6.7e-89	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	51
AccB1I	GGYRCC	1 cut(s)	121
AccI	GTMKAC	2 cut(s)	345, 2135
AccIII	TCCGGA	1 cut(s)	468
AclWI	GGATC	5 cut(s)	1211, 1215, 2105, 2120, 2133
AcoI	YGGCCR	4 cut(s)	309, 699, 1366, 1509
AcsI	RAATTY	5 cut(s)	958, 1436, 2021, 2272, 2279
AcuI	CTGAAG	2 cut(s)	201, 1827
AcyI	GRCGYC	2 cut(s)	48, 259
AfaI	GTAC	2 cut(s)	1783, 2198
AfeI	AGCGCT	2 cut(s)	357, 366
AfiI	CCNNNNNNNGG	7 cut(s)	118, 337, 434, 492, 1288, 1771, 2148
AflII	CTTAAG	1 cut(s)	1418
AflIII	ACRYGT	1 cut(s)	501
AgsI	TTSAA	4 cut(s)	1436, 1501, 2212, 2272
AjnI	CCWGG	6 cut(s)	485, 518, 772, 1252, 1368, 2114
AjuI	GAANNNNNNNTTGG	2 cut(s)	491, 523
Alw21I	GWGCWC	1 cut(s)	291
Alw26I	GTCTC	4 cut(s)	58, 1259, 1692, 1842
AlwI	GGATC	5 cut(s)	1211, 1215, 2105, 2120, 2133
Ama87I	CYCGRG	1 cut(s)	1576
Aor13HI	TCCGGA	1 cut(s)	468
Aor51HI	AGCGCT	2 cut(s)	357, 366
AoxI	GGCC	9 cut(s)	241, 309, 414, 450, 699, 770, 1366, 1509, 1908
ApeKI	GCWGC	5 cut(s)	821, 824, 898, 1664, 1970
ApoI	RAATTY	5 cut(s)	958, 1436, 2021, 2272, 2279
ArsI	GACNNNNNNTTYG	4 cut(s)	632, 664, 2069, 2101
Asp700I	GAANNNNTTC	2 cut(s)	275, 278
AspLEI	GCGC	5 cut(s)	139, 358, 367, 532, 1078
AspS9I	GGNCC	6 cut(s)	218, 224, 424, 495, 919, 1631
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	6 cut(s)	841, 925, 967, 1247, 2164, 2258
AsuII	TTCGAA	2 cut(s)	1090, 2277
AvaI	CYCGRG	1 cut(s)	1576
AvaII	GGWCC	6 cut(s)	218, 224, 424, 495, 919, 1631
AxyI	CCTNAGG	2 cut(s)	93, 129
BalI	TGGCCA	3 cut(s)	311, 1368, 1511
BamHI	GGATCC	1 cut(s)	2125
BanI	GGYRCC	1 cut(s)	121
BanII	GRGCYC	4 cut(s)	92, 174, 291, 1282
BbsI	GAAGAC	4 cut(s)	189, 794, 1286, 1578
Bbv12I	GWGCWC	1 cut(s)	291
BbvI	GCAGC	5 cut(s)	808, 836, 885, 1651, 1957
BceAI	ACGGC	2 cut(s)	246, 2215
BcgI	CGANNNNNNTGC	4 cut(s)	1797, 1831, 1847, 1881
BciT130I	CCWGG	6 cut(s)	487, 520, 774, 1254, 1370, 2116
BciVI	GTATCC	1 cut(s)	1935
BclI	TGATCA	1 cut(s)	1237
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	4 cut(s)	58, 1259, 1692, 1842
BfaI	CTAG	3 cut(s)	872, 881, 1148
BfmI	CTRYAG	1 cut(s)	822
BfoI	RGCGCY	4 cut(s)	140, 359, 368, 533
BfrI	CTTAAG	1 cut(s)	1418
BfuI	GTATCC	1 cut(s)	1935
BglI	GCCNNNNNGGC	1 cut(s)	698
BglII	AGATCT	1 cut(s)	1543
BisI	GCNGC	9 cut(s)	248, 319, 322, 714, 822, 825, 899, 1665, 1971
BlsI	GCNGC	9 cut(s)	249, 320, 323, 715, 823, 826, 900, 1666, 1972
Bme1390I	CCNGG	7 cut(s)	222, 487, 520, 774, 1254, 1370, 2116
Bme18I	GGWCC	6 cut(s)	218, 224, 424, 495, 919, 1631
BmeT110I	CYCGRG	1 cut(s)	1576
BmgT120I	GGNCC	6 cut(s)	218, 224, 424, 495, 919, 1631
BmiI	GGNNCC	8 cut(s)	123, 225, 426, 473, 661, 691, 920, 2127
BmrFI	CCNGG	7 cut(s)	222, 487, 520, 774, 1254, 1370, 2116
BmsI	GCATC	4 cut(s)	625, 1153, 1459, 1651
BpiI	GAAGAC	4 cut(s)	189, 794, 1286, 1578
BplI	GAGNNNNNCTC	2 cut(s)	1935, 1967
BpmI	CTGGAG	7 cut(s)	554, 569, 795, 914, 1100, 1275, 1923
Bpu10I	CCTNAGC	1 cut(s)	1022
Bpu14I	TTCGAA	2 cut(s)	1090, 2277
BpuMI	CCSGG	1 cut(s)	222
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaHI	GRCGYC	2 cut(s)	48, 259
BsaJI	CCNNGG	4 cut(s)	117, 519, 2037, 2114
BsaWI	WCCGGW	4 cut(s)	215, 382, 468, 851
BsaXI	ACNNNNNCTCC	8 cut(s)	38, 68, 149, 179, 768, 798, 2293, 2323
Bsc4I	CCNNNNNNNGG	7 cut(s)	118, 337, 434, 492, 1288, 1771, 2148
Bse118I	RCCGGY	3 cut(s)	239, 692, 701
Bse1I	ACTGG	1 cut(s)	897
Bse21I	CCTNAGG	2 cut(s)	93, 129
Bse3DI	GCAATG	3 cut(s)	679, 1038, 1267
Bse8I	GATNNNNATC	1 cut(s)	1143
BseAI	TCCGGA	1 cut(s)	468
BseBI	CCWGG	6 cut(s)	487, 520, 774, 1254, 1370, 2116
BseDI	CCNNGG	4 cut(s)	117, 519, 2037, 2114
BseGI	GGATG	8 cut(s)	976, 1219, 1804, 1888, 1965, 1977, 2138, 2265
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	7 cut(s)	118, 337, 434, 492, 1288, 1771, 2148
BseMI	GCAATG	3 cut(s)	679, 1038, 1267
BseNI	ACTGG	1 cut(s)	897
BseRI	GAGGAG	5 cut(s)	117, 154, 416, 419, 778
BseXI	GCAGC	5 cut(s)	808, 836, 885, 1651, 1957
BshFI	GGCC	9 cut(s)	243, 311, 416, 452, 701, 772, 1368, 1511, 1910
BshNI	GGYRCC	1 cut(s)	121
BsiHKAI	GWGCWC	1 cut(s)	291
BsiHKCI	CYCGRG	1 cut(s)	1576
BslFI	GGGAC	5 cut(s)	410, 932, 1084, 1397, 1427
BslI	CCNNNNNNNGG	7 cut(s)	118, 337, 434, 492, 1288, 1771, 2148
BsmAI	GTCTC	4 cut(s)	58, 1259, 1692, 1842
BsmBI	CGTCTC	2 cut(s)	58, 1842
BsmFI	GGGAC	5 cut(s)	410, 932, 1084, 1397, 1427
BsmI	GAATGC	1 cut(s)	1134
BsnI	GGCC	9 cut(s)	243, 311, 416, 452, 701, 772, 1368, 1511, 1910
BsoBI	CYCGRG	1 cut(s)	1576
Bsp119I	TTCGAA	2 cut(s)	1090, 2277
Bsp1286I	GDGCHC	4 cut(s)	92, 174, 291, 1282
Bsp13I	TCCGGA	1 cut(s)	468
Bsp143I	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
BspANI	GGCC	9 cut(s)	243, 311, 416, 452, 701, 772, 1368, 1511, 1910
BspEI	TCCGGA	1 cut(s)	468
BspLI	GGNNCC	8 cut(s)	123, 225, 426, 473, 661, 691, 920, 2127
BspMAI	CTGCAG	1 cut(s)	826
BspPI	GGATC	5 cut(s)	1211, 1215, 2105, 2120, 2133
BspT104I	TTCGAA	2 cut(s)	1090, 2277
BspT107I	GGYRCC	1 cut(s)	121
BspTI	CTTAAG	1 cut(s)	1418
BsrDI	GCAATG	3 cut(s)	679, 1038, 1267
BsrFI	RCCGGY	3 cut(s)	239, 692, 701
BsrI	ACTGG	1 cut(s)	897
BssAI	RCCGGY	3 cut(s)	239, 692, 701
BssECI	CCNNGG	4 cut(s)	117, 519, 2037, 2114
BssMI	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
BssNI	GRCGYC	2 cut(s)	48, 259
BssT1I	CCWWGG	1 cut(s)	2037
Bst2UI	CCWGG	6 cut(s)	487, 520, 774, 1254, 1370, 2116
Bst4CI	ACNGT	3 cut(s)	1318, 1402, 2373
Bst6I	CTCTTC	2 cut(s)	1087, 1641
BstACI	GRCGYC	2 cut(s)	48, 259
BstAFI	CTTAAG	1 cut(s)	1418
BstAPI	GCANNNNNTGC	2 cut(s)	1652, 1661
BstBI	TTCGAA	2 cut(s)	1090, 2277
BstC8I	GCNNGC	7 cut(s)	245, 450, 703, 929, 1029, 1278, 2341
BstENI	CCTNNNNNAGG	3 cut(s)	335, 1286, 2146
BstF5I	GGATG	8 cut(s)	976, 1219, 1804, 1888, 1965, 1977, 2138, 2265
BstH2I	RGCGCY	4 cut(s)	140, 359, 368, 533
BstHHI	GCGC	5 cut(s)	139, 358, 367, 532, 1078
BstKTI	GATC	9 cut(s)	144, 411, 832, 1210, 1219, 1240, 1546, 2113, 2128
BstMAI	GTCTC	4 cut(s)	58, 1259, 1692, 1842
BstMBI	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
BstMWI	GCNNNNNNNGC	9 cut(s)	362, 364, 698, 895, 904, 1082, 1652, 1661, 1907
BstNI	CCWGG	6 cut(s)	487, 520, 774, 1254, 1370, 2116
BstNSI	RCATGY	1 cut(s)	1031
BstSCI	CCNGG	7 cut(s)	220, 485, 518, 772, 1252, 1368, 2114
BstSFI	CTRYAG	1 cut(s)	822
BstV1I	GCAGC	5 cut(s)	808, 836, 885, 1651, 1957
BstV2I	GAAGAC	4 cut(s)	189, 794, 1286, 1578
BstX2I	RGATCY	2 cut(s)	1543, 2125
BstXI	CCANNNNNNTGG	1 cut(s)	526
BstYI	RGATCY	2 cut(s)	1543, 2125
Bsu36I	CCTNAGG	2 cut(s)	93, 129
BsuI	GTATCC	1 cut(s)	1935
BsuRI	GGCC	9 cut(s)	243, 311, 416, 452, 701, 772, 1368, 1511, 1910
BtgZI	GCGATG	1 cut(s)	160
BtsCI	GGATG	8 cut(s)	976, 1219, 1804, 1888, 1965, 1977, 2138, 2265
BtsI	GCAGTG	1 cut(s)	1782
BtsIMutI	CAGTG	3 cut(s)	1398, 1782, 1960
Cac8I	GCNNGC	7 cut(s)	245, 450, 703, 929, 1029, 1278, 2341
CfoI	GCGC	5 cut(s)	139, 358, 367, 532, 1078
Cfr10I	RCCGGY	3 cut(s)	239, 692, 701
Cfr13I	GGNCC	6 cut(s)	218, 224, 424, 495, 919, 1631
CpoI	CGGWCCG	1 cut(s)	218
CseI	GACGC	1 cut(s)	267
Csp6I	GTAC	2 cut(s)	1782, 2197
CspI	CGGWCCG	1 cut(s)	218
CviAII	CATG	4 cut(s)	596, 1028, 1387, 2179
CviQI	GTAC	2 cut(s)	1782, 2197
DpnI	GATC	9 cut(s)	143, 410, 831, 1209, 1218, 1239, 1545, 2112, 2127
DpnII	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
DraI	TTTAAA	1 cut(s)	742
EaeI	YGGCCR	4 cut(s)	309, 699, 1366, 1509
Eam1104I	CTCTTC	2 cut(s)	1087, 1641
EarI	CTCTTC	2 cut(s)	1087, 1641
EciI	GGCGGA	3 cut(s)	245, 453, 1554
Ecl136II	GAGCTC	1 cut(s)	289
Eco130I	CCWWGG	1 cut(s)	2037
Eco147I	AGGCCT	1 cut(s)	772
Eco24I	GRGCYC	4 cut(s)	92, 174, 291, 1282
Eco47I	GGWCC	6 cut(s)	218, 224, 424, 495, 919, 1631
Eco47III	AGCGCT	2 cut(s)	357, 366
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	2 cut(s)	201, 1827
Eco81I	CCTNAGG	2 cut(s)	93, 129
Eco88I	CYCGRG	1 cut(s)	1576
EcoICRI	GAGCTC	1 cut(s)	289
EcoNI	CCTNNNNNAGG	3 cut(s)	335, 1286, 2146
EcoO109I	RGGNCCY	2 cut(s)	919, 1631
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	6 cut(s)	485, 518, 772, 1252, 1368, 2114
EcoT14I	CCWWGG	1 cut(s)	2037
EcoT38I	GRGCYC	4 cut(s)	92, 174, 291, 1282
ErhI	CCWWGG	1 cut(s)	2037
Esp3I	CGTCTC	2 cut(s)	58, 1842
FaeI	CATG	4 cut(s)	599, 1031, 1390, 2182
FalI	AAGNNNNNCTT	6 cut(s)	263, 295, 1787, 1819, 2207, 2239
FaqI	GGGAC	5 cut(s)	410, 932, 1084, 1397, 1427
FatI	CATG	4 cut(s)	595, 1027, 1386, 2178
FauI	CCCGC	1 cut(s)	936
FauNDI	CATATG	2 cut(s)	1810, 1825
FbaI	TGATCA	1 cut(s)	1237
FblI	GTMKAC	2 cut(s)	345, 2135
Fnu4HI	GCNGC	9 cut(s)	248, 319, 322, 714, 822, 825, 899, 1665, 1971
FokI	GGATG	8 cut(s)	983, 1226, 1811, 1895, 1964, 1972, 2125, 2272
FriOI	GRGCYC	4 cut(s)	92, 174, 291, 1282
Fsp4HI	GCNGC	9 cut(s)	248, 319, 322, 714, 822, 825, 899, 1665, 1971
FspBI	CTAG	3 cut(s)	872, 881, 1148
GlaI	GCGC	5 cut(s)	138, 357, 366, 531, 1077
GluI	GCNGC	9 cut(s)	248, 319, 322, 714, 822, 825, 899, 1665, 1971
GsuI	CTGGAG	7 cut(s)	554, 569, 795, 914, 1100, 1275, 1923
HaeII	RGCGCY	4 cut(s)	140, 359, 368, 533
HaeIII	GGCC	9 cut(s)	243, 311, 416, 452, 701, 772, 1368, 1511, 1910
HgaI	GACGC	1 cut(s)	267
HhaI	GCGC	5 cut(s)	139, 358, 367, 532, 1078
Hin1I	GRCGYC	2 cut(s)	48, 259
Hin1II	CATG	4 cut(s)	599, 1031, 1390, 2182
Hin6I	GCGC	5 cut(s)	137, 356, 365, 530, 1076
HinP1I	GCGC	5 cut(s)	137, 356, 365, 530, 1076
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HindIII	AAGCTT	2 cut(s)	573, 1019
HphI	GGTGA	6 cut(s)	841, 925, 967, 1247, 2164, 2258
Hpy166II	GTNNAC	6 cut(s)	346, 388, 568, 1057, 1782, 2136
Hpy8I	GTNNAC	6 cut(s)	346, 388, 568, 1057, 1782, 2136
Hpy99I	CGWCG	7 cut(s)	50, 53, 261, 267, 307, 467, 2125
HpyAV	CCTTC	4 cut(s)	39, 752, 1417, 1789
HpyCH4III	ACNGT	3 cut(s)	1318, 1402, 2373
HpyCH4IV	ACGT	4 cut(s)	48, 420, 501, 1059
HpyF10VI	GCNNNNNNNGC	9 cut(s)	362, 364, 698, 895, 904, 1082, 1652, 1661, 1907
HpySE526I	ACGT	4 cut(s)	48, 420, 501, 1059
Hsp92I	GRCGYC	2 cut(s)	48, 259
Hsp92II	CATG	4 cut(s)	599, 1031, 1390, 2182
HspAI	GCGC	5 cut(s)	137, 356, 365, 530, 1076
Kpn2I	TCCGGA	1 cut(s)	468
KroI	GCCGGC	1 cut(s)	701
KroNI	GCCGGC	1 cut(s)	703
Ksp22I	TGATCA	1 cut(s)	1237
Kzo9I	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
Lsp1109I	GCAGC	5 cut(s)	808, 836, 885, 1651, 1957
LweI	GCATC	4 cut(s)	625, 1153, 1459, 1651
MaeI	CTAG	3 cut(s)	872, 881, 1148
MaeII	ACGT	4 cut(s)	48, 420, 501, 1059
MalI	GATC	9 cut(s)	143, 410, 831, 1209, 1218, 1239, 1545, 2112, 2127
MboI	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
MflI	RGATCY	2 cut(s)	1543, 2125
MhlI	GDGCHC	4 cut(s)	92, 174, 291, 1282
MlsI	TGGCCA	3 cut(s)	311, 1368, 1511
MluNI	TGGCCA	3 cut(s)	311, 1368, 1511
MlyI	GAGTC	7 cut(s)	74, 143, 155, 383, 545, 1706, 2141
MmeI	TCCRAC	5 cut(s)	245, 522, 735, 2103, 2154
Mox20I	TGGCCA	3 cut(s)	311, 1368, 1511
MroI	TCCGGA	1 cut(s)	468
MroNI	GCCGGC	1 cut(s)	701
MroXI	GAANNNNTTC	2 cut(s)	275, 278
MscI	TGGCCA	3 cut(s)	311, 1368, 1511
MseI	TTAA	8 cut(s)	741, 993, 1419, 1671, 2025, 2081, 2204, 2226
MslI	CAYNNNNRTG	1 cut(s)	1178
Msp20I	TGGCCA	3 cut(s)	311, 1368, 1511
MspA1I	CMGCKG	1 cut(s)	827
MspCI	CTTAAG	1 cut(s)	1418
MspR9I	CCNGG	7 cut(s)	222, 487, 520, 774, 1254, 1370, 2116
Mva1269I	GAATGC	1 cut(s)	1134
MvaI	CCWGG	6 cut(s)	487, 520, 774, 1254, 1370, 2116
MwoI	GCNNNNNNNGC	9 cut(s)	362, 364, 698, 895, 904, 1082, 1652, 1661, 1907
NaeI	GCCGGC	1 cut(s)	703
NciI	CCSGG	1 cut(s)	222
NdeI	CATATG	2 cut(s)	1810, 1825
NdeII	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
NgoMIV	GCCGGC	1 cut(s)	701
NlaIII	CATG	4 cut(s)	599, 1031, 1390, 2182
NlaIV	GGNNCC	8 cut(s)	123, 225, 426, 473, 661, 691, 920, 2127
NmeAIII	GCCGAG	2 cut(s)	98, 865
NspI	RCATGY	1 cut(s)	1031
NspV	TTCGAA	2 cut(s)	1090, 2277
PaeI	GCATGC	1 cut(s)	1031
PceI	AGGCCT	1 cut(s)	772
PcsI	WCGNNNNNNNCGW	4 cut(s)	57, 165, 417, 426
PctI	GAATGC	1 cut(s)	1134
PdiI	GCCGGC	1 cut(s)	703
PdmI	GAANNNNTTC	2 cut(s)	275, 278
PfeI	GAWTC	5 cut(s)	541, 865, 1114, 1488, 2327
PflFI	GACNNNGTC	3 cut(s)	50, 222, 261
PfoI	TCCNGGA	1 cut(s)	1252
PkrI	GCNGC	9 cut(s)	249, 320, 323, 715, 823, 826, 900, 1666, 1972
PleI	GAGTC	7 cut(s)	74, 143, 155, 383, 544, 1705, 2140
PpsI	GAGTC	7 cut(s)	74, 143, 155, 383, 544, 1705, 2140
PpuMI	RGGWCCY	2 cut(s)	919, 1631
Psp124BI	GAGCTC	1 cut(s)	291
Psp5II	RGGWCCY	2 cut(s)	919, 1631
Psp6I	CCWGG	6 cut(s)	485, 518, 772, 1252, 1368, 2114
PspGI	CCWGG	6 cut(s)	485, 518, 772, 1252, 1368, 2114
PspN4I	GGNNCC	8 cut(s)	123, 225, 426, 473, 661, 691, 920, 2127
PspPI	GGNCC	6 cut(s)	218, 224, 424, 495, 919, 1631
PspPPI	RGGWCCY	2 cut(s)	919, 1631
PstI	CTGCAG	1 cut(s)	826
PsuI	RGATCY	2 cut(s)	1543, 2125
PsyI	GACNNNGTC	3 cut(s)	50, 222, 261
PvuII	CAGCTG	1 cut(s)	827
RsaI	GTAC	2 cut(s)	1783, 2198
RsaNI	GTAC	2 cut(s)	1782, 2197
RseI	CAYNNNNRTG	1 cut(s)	1178
Rsr2I	CGGWCCG	1 cut(s)	218
RsrII	CGGWCCG	1 cut(s)	218
SacI	GAGCTC	1 cut(s)	291
SalI	GTCGAC	1 cut(s)	344
SaqAI	TTAA	8 cut(s)	741, 993, 1419, 1671, 2025, 2081, 2204, 2226
SatI	GCNGC	9 cut(s)	248, 319, 322, 714, 822, 825, 899, 1665, 1971
Sau3AI	GATC	9 cut(s)	141, 408, 829, 1207, 1216, 1237, 1543, 2110, 2125
Sau96I	GGNCC	6 cut(s)	218, 224, 424, 495, 919, 1631
SchI	GAGTC	7 cut(s)	74, 143, 155, 383, 545, 1706, 2141
ScrFI	CCNGG	7 cut(s)	222, 487, 520, 774, 1254, 1370, 2116
SduI	GDGCHC	4 cut(s)	92, 174, 291, 1282
SfaNI	GCATC	4 cut(s)	625, 1153, 1459, 1651
SfcI	CTRYAG	1 cut(s)	822
SfuI	TTCGAA	2 cut(s)	1090, 2277
SinI	GGWCC	6 cut(s)	218, 224, 424, 495, 919, 1631
SmiMI	CAYNNNNRTG	1 cut(s)	1178
SmlI	CTYRAG	1 cut(s)	1418
SmoI	CTYRAG	1 cut(s)	1418
SphI	GCATGC	1 cut(s)	1031
SseBI	AGGCCT	1 cut(s)	772
SspI	AATATT	1 cut(s)	2029
SspMI	CTAG	3 cut(s)	872, 881, 1148
SstI	GAGCTC	1 cut(s)	291
StuI	AGGCCT	1 cut(s)	772
StyD4I	CCNGG	7 cut(s)	220, 485, 518, 772, 1252, 1368, 2114
StyI	CCWWGG	1 cut(s)	2037
TaaI	ACNGT	3 cut(s)	1318, 1402, 2373
TaiI	ACGT	4 cut(s)	51, 423, 504, 1062
TaqI	TCGA	9 cut(s)	86, 305, 345, 411, 539, 1090, 1378, 1430, 2277
TaqII	GACCGA	1 cut(s)	1583
TatI	WGTACW	1 cut(s)	1781
TauI	GCSGC	4 cut(s)	250, 321, 324, 716
TfiI	GAWTC	5 cut(s)	541, 865, 1114, 1488, 2327
Tru1I	TTAA	8 cut(s)	741, 993, 1419, 1671, 2025, 2081, 2204, 2226
Tru9I	TTAA	8 cut(s)	741, 993, 1419, 1671, 2025, 2081, 2204, 2226
TscAI	CASTG	3 cut(s)	1405, 1782, 1960
TseI	GCWGC	5 cut(s)	821, 824, 898, 1664, 1970
TspDTI	ATGAA	2 cut(s)	210, 1812
TspGWI	ACGGA	6 cut(s)	291, 299, 413, 1053, 1956, 2089
TspRI	CASTG	3 cut(s)	1405, 1782, 1960
Tth111I	GACNNNGTC	3 cut(s)	50, 222, 261
Vha464I	CTTAAG	1 cut(s)	1418
VpaK11BI	GGWCC	6 cut(s)	218, 224, 424, 495, 919, 1631
XagI	CCTNNNNNAGG	3 cut(s)	335, 1286, 2146
XapI	RAATTY	5 cut(s)	958, 1436, 2021, 2272, 2279
XceI	RCATGY	1 cut(s)	1031
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1530
XmiI	GTMKAC	2 cut(s)	345, 2135
XmnI	GAANNNNTTC	2 cut(s)	275, 278
XspI	CTAG	3 cut(s)	872, 881, 1148
ZraI	GACGTC	1 cut(s)	49

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.