Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

412295 .. 414742

Gene Structure 2448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1004400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGAAAAAACGGACAACCCCCTAAACCACTCCGATAATCCCCCTAACGACGTCGTCTTCGACGACTCGTCGCCGGAAACCGACCTCACTCCCTCAAGCTCGACCCCTCACGAAAACCACTCGTCGGAAAACCCGTCGGCACCTCCCCAAACGACTCTCGAAGCCCCCGTTTCGGACTCTCAAGATGACTCATCCGAGCCCATTCTCGAAGGTGAAGACACCCTTCTCGATCAACAGCACCTCCAAAACCCTATCGAAGCGGGCCCAGCTGAACCCGGTCTGCCAGCCAAGAGACGCCGTCGCAGGAAGAAGTTCTTCACGGAGCTCAATGGCTCTCCGTCGTTGGCCAAGAACCGCCGCACCGACCTTAACAAAGACGTAGACGTCGAAGCCCTAATCGCAATCTCAGTGGGGTTTCCGGTCGACTCGCTCACTGAGGAGGAAATCGAGGCCAACGTGGTCCCCACCATCGGCGGCGTTGAGCAAGCCAACTATATCGTCGTGAGGAACCACATTCTGTCTCGGTGGAGGTCAAATGTGTCTTTCTGGTTAACCCGGGAGCTGGCGCTGGAGTCGATTCGCTCGGAGCACAAGGGCCTGGTCGACTCAGCTTACGACTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTTGCACCGGCGGTGAAAGAAGCAAAATTGAGGTCGTTTGACGGGGCCGAGAGGGGCAATGTGGTCATTGTGGGGGCTGGCTTGGCGGGTTTGGTGGCGGCGAGGCAATTAGTGTTTTTGGGCTTTAAAGTTGTTGTCTTGGAAGGTAGAAGCAGGCCTGGTGGTCGCGTGAAGACGAGGAAGATGGTAGGCGAGCGCGAGGGAGTGGAGGCTGCGGCGGATCTCGGGGGAAGTGTTCTCACCGGAATCAATGGAAACCCGCTCGGAGTTTTAGCTAGGCAACTGGGTTTGCCTCTTCATAAGGTGAGGGATATTTGCCCGCTTTATTTACCAGATGGGAAAGCTGTTAATTCTGAGATGGATTCTAGTATAGAGACTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGGCACGCAATGATTGAAGAAGTTAAGTCCGTAGATGTTCCATTAGGGACTGCGTTGGAAGCTTTTCGACGCGTTTATAGTGTTGCACGAGACACGCAGGAGAGAATGCTCTTGGACTGGCATCTTGCTAATTTGGAATATGCTAATGCTTCCTTGATGTCCAATTTGTCCATGGCCTATTGGGATCAGGATGATCCCTATGAGATGGGAGGTGACCATTGTTTTATCCCGGGAGGCAATGAGACTTTTGTGCGGTCCCTTGCAGAGGGCCTTCCAATCTTCTATGAAAGGACTGTGCAGAGTATTCGGTATGGTTCTGATGGGGTTTTGGTTTATGCAAACGGGCAGGAGTTTCGTGGGGACATGGTTCTTTGCACAGTCCCATTAGGCGTGCTTAAGAAGGGTTCCATTGAATTTGTCCCTGGCCTTCCACAAAGGAAGAAGGATGCAATTCAGAGTATAGGATTTGGATTACTGAATAAGGTTGCCATATTGTTCCCTTATAACTTCTGGGGTGGGGATATTGATACTTTTGGGCATTTGACTGAGGATCCGAGAATGAGAGGCGAGTTCTTTCTGTTTTATAGCTACTCTTCTGTATCAGGAGGGCCTCTTCTGGTTGCTCTTGTGGCTGGAGATGCTGCAATTAAGTTTGAGTTGATGTCTCCTGTTGAGTCTGTGAATAGGGTGTTGGACATATTAAGGGGTATTTTCAACCCGAAAGGGATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGACGACTTTGCATACGGTTCTTATTCTTATGTTGCAGTAGGGTCTTCAGGAGATGATTATGATATTCTGGCAGAGAGTATTGGAGATGGGAGAGTGTTCTTTGCTGGGGAGGCCACTAACAAGCAGTATCCGGCAACAATGCACGGAGCTTTTCTGAGCGGGATGAGAGAGGCTGCTAACATACTGAGAGTAGCCAAAAAGCGGTCAATTATCCCGTTGGAAAAACCAAGTAATGTTGGTGATGAAATGGACGATTTGAATAAGTTATTTGACACCCCTGACGTAAGATGTGGGAGCTTCTCCGTTTTGTTTGATCCTCGGTCAAATGAGTTTGATTCTGCCAACTCGCTGTTGAGGGTGAAATTTGGAGTGGGAAATATGGAGGTGGGATCACGTCTCTCTCTTTGTTTGTATGGCTTGATTTCGAGGAATCAGGCGATGAAGTTGAGTGAGGTAGAAGGTGATGGGAACAAGATGAGAATGATAAATGTGGAATTTGGGGTGAGGTTGGTTGGGAGGAAAGGTTTAAGTGGTGCTGGGGAATCTCTAATAAGCTACATTAAGACAGCAAAATCAAAACCCAACGTAGTCGGAGGAGTTCAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

816

Amino Acids

89.09

Weight (kDa)

5.28

Isoelectric Point (pI)

49.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	143 - 216	1.3e-14	SWIRM domain
NAD_binding_8	PF13450	240 - 301	9e-11	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	245 - 675	2.4e-87	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
AasI	GACNNNNNNGTC	1 cut(s)	383
AatII	GACGTC	2 cut(s)	54, 387
AccB1I	GGYRCC	1 cut(s)	139
AccBSI	CCGCTC	2 cut(s)	913, 1998
AccI	GTMKAC	3 cut(s)	381, 423, 603
AccII	CGCG	3 cut(s)	819, 849, 1137
AccIII	TCCGGA	1 cut(s)	1801
AclWI	GGATC	7 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	3 cut(s)	1478, 2201, 2333
AcuI	CTGAAG	1 cut(s)	1869
AcyI	GRCGYC	3 cut(s)	51, 295, 384
AdeI	CACNNNGTG	1 cut(s)	1830
AfiI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
AflII	CTTAAG	1 cut(s)	1460
AflIII	ACRYGT	1 cut(s)	1135
AgsI	TTSAA	5 cut(s)	1082, 1478, 1780, 2098, 2441
AhdI	GACNNNNNGTC	1 cut(s)	67
AjiI	CACGTC	1 cut(s)	2234
AjnI	CCWGG	3 cut(s)	597, 808, 1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	4 cut(s)	327, 591, 633, 1826
Alw26I	GTCTC	7 cut(s)	286, 525, 1019, 1149, 1301, 1734, 2240
Alw44I	GTGCAC	1 cut(s)	1822
AlwI	GGATC	7 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236
Ama87I	CYCGRG	3 cut(s)	555, 875, 1294
Aor13HI	TCCGGA	1 cut(s)	1801
ApaI	GGGCCC	1 cut(s)	266
ApaLI	GTGCAC	1 cut(s)	1822
ApeKI	GCWGC	3 cut(s)	863, 1706, 2012
ApoI	RAATTY	3 cut(s)	1478, 2201, 2333
ArsI	GACNNNNNNTTYG	4 cut(s)	41, 73, 668, 700
Asp700I	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
AspLEI	GCGC	2 cut(s)	568, 849
AspS9I	GGNCC	8 cut(s)	262, 263, 460, 595, 696, 1320, 1333, 1673
AsuC2I	CCSGG	5 cut(s)	276, 556, 557, 1295, 1296
AsuHPI	GGTGA	9 cut(s)	224, 676, 883, 967, 1289, 2090, 2209, 2312, 2353
AvaI	CYCGRG	3 cut(s)	555, 875, 1294
AvaII	GGWCC	2 cut(s)	460, 1320
BaeGI	GKGCMC	2 cut(s)	266, 1826
BalI	TGGCCA	1 cut(s)	347
BamHI	GGATCC	1 cut(s)	1615
BanI	GGYRCC	1 cut(s)	139
BanII	GRGCYC	3 cut(s)	201, 266, 327
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
BauI	CACGAG	1 cut(s)	1152
BbsI	GAAGAC	4 cut(s)	49, 222, 830, 1875
Bbv12I	GWGCWC	4 cut(s)	327, 591, 633, 1826
BbvI	GCAGC	3 cut(s)	850, 1693, 1999
BccI	CCATC	8 cut(s)	476, 829, 980, 1003, 1264, 1379, 1919, 2297
BceAI	ACGGC	2 cut(s)	282, 649
BcgI	CGANNNNNNTGC	4 cut(s)	1352, 1386, 1400, 1434
BciT130I	CCWGG	3 cut(s)	599, 810, 1488
BciVI	GTATCC	1 cut(s)	1977
BcnI	CCSGG	5 cut(s)	276, 556, 557, 1295, 1296
BcoDI	GTCTC	7 cut(s)	286, 525, 1019, 1149, 1301, 1734, 2240
BfaI	CTAG	2 cut(s)	927, 1017
BfoI	RGCGCY	1 cut(s)	569
BfrI	CTTAAG	1 cut(s)	1460
BfuI	GTATCC	1 cut(s)	1977
BisI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
BlsI	GCNGC	7 cut(s)	359, 476, 751, 865, 868, 1708, 2014
Bme1390I	CCNGG	8 cut(s)	276, 556, 557, 599, 810, 1295, 1296, 1488
Bme18I	GGWCC	2 cut(s)	460, 1320
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	3 cut(s)	555, 875, 1294
BmgBI	CACGTC	1 cut(s)	2234
BmgT120I	GGNCC	8 cut(s)	262, 263, 460, 595, 696, 1320, 1333, 1673
BmiI	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
BmrFI	CCNGG	8 cut(s)	276, 556, 557, 599, 810, 1295, 1296, 1488
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	3 cut(s)	1195, 1501, 1693
BmuI	ACTGGG	1 cut(s)	944
BpiI	GAAGAC	4 cut(s)	49, 222, 830, 1875
BpmI	CTGGAG	2 cut(s)	590, 1719
Bpu10I	CCTNAGC	1 cut(s)	1064
BpuEI	CTTGAG	2 cut(s)	79, 165
BpuMI	CCSGG	5 cut(s)	276, 556, 557, 1295, 1296
BsaHI	GRCGYC	3 cut(s)	51, 295, 384
BsaJI	CCNNGG	5 cut(s)	555, 1236, 1294, 1486, 2156
BsaWI	WCCGGW	3 cut(s)	418, 893, 1801
BsaXI	ACNNNNNCTCC	4 cut(s)	225, 255, 2347, 2377
Bsc4I	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
Bse118I	RCCGGY	1 cut(s)	658
Bse1I	ACTGG	2 cut(s)	939, 1187
Bse3DI	GCAATG	3 cut(s)	715, 1080, 1309
BseAI	TCCGGA	1 cut(s)	1801
BseBI	CCWGG	3 cut(s)	599, 810, 1488
BseDI	CCNNGG	5 cut(s)	555, 1236, 1294, 1486, 2156
BseGI	GGATG	4 cut(s)	191, 1261, 1516, 2007
BseLI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
BseMI	GCAATG	3 cut(s)	715, 1080, 1309
BseMII	CTCAG	7 cut(s)	420, 426, 621, 996, 1602, 1985, 2015
BseNI	ACTGG	2 cut(s)	939, 1187
BseRI	GAGGAG	2 cut(s)	452, 2448
BseSI	GKGCMC	2 cut(s)	266, 1826
BseXI	GCAGC	3 cut(s)	850, 1693, 1999
BseYI	CCCAGC	3 cut(s)	265, 1943, 2375
BsgI	GTGCAG	1 cut(s)	1382
Bsh1236I	CGCG	3 cut(s)	819, 849, 1137
Bsh1285I	CGRYCG	1 cut(s)	423
BshNI	GGYRCC	1 cut(s)	139
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	4 cut(s)	327, 591, 633, 1826
BsiHKCI	CYCGRG	3 cut(s)	555, 875, 1294
BsiSI	CCGG	9 cut(s)	74, 276, 419, 556, 659, 894, 1295, 1802, 1970
BslFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BslI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
BsmAI	GTCTC	7 cut(s)	286, 525, 1019, 1149, 1301, 1734, 2240
BsmBI	CGTCTC	2 cut(s)	286, 2240
BsmFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BsmI	GAATGC	1 cut(s)	1176
BsoBI	CYCGRG	3 cut(s)	555, 875, 1294
Bsp120I	GGGCCC	1 cut(s)	262
Bsp1286I	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
Bsp13I	TCCGGA	1 cut(s)	1801
Bsp143I	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
Bsp19I	CCATGG	1 cut(s)	1236
BspCNI	CTCAG	7 cut(s)	419, 427, 620, 997, 1603, 1986, 2016
BspEI	TCCGGA	1 cut(s)	1801
BspFNI	CGCG	3 cut(s)	819, 849, 1137
BspLI	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
BspPI	GGATC	7 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236
BspT107I	GGYRCC	1 cut(s)	139
BspTI	CTTAAG	1 cut(s)	1460
BsrBI	CCGCTC	2 cut(s)	913, 1998
BsrDI	GCAATG	3 cut(s)	715, 1080, 1309
BsrFI	RCCGGY	1 cut(s)	658
BsrI	ACTGG	2 cut(s)	939, 1187
BssAI	RCCGGY	1 cut(s)	658
BssECI	CCNNGG	5 cut(s)	555, 1236, 1294, 1486, 2156
BssMI	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
BssNI	GRCGYC	3 cut(s)	51, 295, 384
BssSI	CACGAG	1 cut(s)	1152
BssT1I	CCWWGG	1 cut(s)	1236
Bst2BI	CACGAG	1 cut(s)	1152
Bst2UI	CCWGG	3 cut(s)	599, 810, 1488
Bst4CI	ACNGT	3 cut(s)	1360, 1444, 1856
Bst6I	CTCTTC	3 cut(s)	951, 1663, 1683
BstACI	GRCGYC	3 cut(s)	51, 295, 384
BstAFI	CTTAAG	1 cut(s)	1460
BstDEI	CTNAG	8 cut(s)	406, 435, 607, 1005, 1064, 1611, 1994, 2024
BstDSI	CCRYGG	1 cut(s)	1236
BstEII	GGTNACC	1 cut(s)	1277
BstENI	CCTNNNNNAGG	1 cut(s)	1328
BstF5I	GGATG	4 cut(s)	191, 1261, 1516, 2007
BstFNI	CGCG	3 cut(s)	819, 849, 1137
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	2 cut(s)	568, 849
BstKTI	GATC	7 cut(s)	232, 874, 1252, 1261, 1618, 2155, 2231
BstMAI	GTCTC	7 cut(s)	286, 525, 1019, 1149, 1301, 1734, 2240
BstMBI	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
BstMCI	CGRYCG	1 cut(s)	423
BstMWI	GCNNNNNNNGC	7 cut(s)	266, 398, 734, 1124, 1694, 1703, 1949
BstNI	CCWGG	3 cut(s)	599, 810, 1488
BstPI	GGTNACC	1 cut(s)	1277
BstSCI	CCNGG	8 cut(s)	274, 554, 555, 597, 808, 1293, 1294, 1486
BstSLI	GKGCMC	2 cut(s)	266, 1826
BstUI	CGCG	3 cut(s)	819, 849, 1137
BstV1I	GCAGC	3 cut(s)	850, 1693, 1999
BstV2I	GAAGAC	4 cut(s)	49, 222, 830, 1875
BstX2I	RGATCY	2 cut(s)	871, 1615
BstYI	RGATCY	2 cut(s)	871, 1615
BsuI	GTATCC	1 cut(s)	1977
BtgI	CCRYGG	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	2291
BtrI	CACGTC	1 cut(s)	2234
BtsCI	GGATG	4 cut(s)	191, 1261, 1516, 2007
BtsI	GCAGTG	1 cut(s)	1824
BtsIMutI	CAGTG	3 cut(s)	414, 432, 1824
CfoI	GCGC	2 cut(s)	568, 849
Cfr10I	RCCGGY	1 cut(s)	658
Cfr13I	GGNCC	8 cut(s)	262, 263, 460, 595, 696, 1320, 1333, 1673
Cfr9I	CCCGGG	2 cut(s)	555, 1294
CseI	GACGC	2 cut(s)	303, 1143
CspCI	CAANNNNNGTGG	2 cut(s)	390, 425
CviAII	CATG	2 cut(s)	1237, 1429
DdeI	CTNAG	8 cut(s)	406, 435, 607, 1005, 1064, 1611, 1994, 2024
DpnI	GATC	7 cut(s)	231, 873, 1251, 1260, 1617, 2154, 2230
DpnII	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
DraI	TTTAAA	1 cut(s)	778
DraIII	CACNNNGTG	1 cut(s)	1830
DrdI	GACNNNNNNGTC	1 cut(s)	383
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	1 cut(s)	383
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	3 cut(s)	951, 1663, 1683
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	951, 1663, 1683
EciI	GGCGGA	1 cut(s)	884
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	1 cut(s)	1236
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	3 cut(s)	201, 266, 327
Eco47I	GGWCC	2 cut(s)	460, 1320
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	1869
Eco88I	CYCGRG	3 cut(s)	555, 875, 1294
Eco91I	GGTNACC	1 cut(s)	1277
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1328
EcoO109I	RGGNCCY	3 cut(s)	595, 1333, 1673
EcoO65I	GGTNACC	1 cut(s)	1277
EcoRII	CCWGG	3 cut(s)	597, 808, 1486
EcoT14I	CCWWGG	1 cut(s)	1236
EcoT38I	GRGCYC	3 cut(s)	201, 266, 327
ErhI	CCWWGG	1 cut(s)	1236
Esp3I	CGTCTC	2 cut(s)	286, 2240
FaeI	CATG	2 cut(s)	1240, 1432
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 299, 331, 1829, 1861
FaqI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
FatI	CATG	2 cut(s)	1236, 1428
FauI	CCCGC	5 cut(s)	253, 730, 918, 978, 1991
FblI	GTMKAC	3 cut(s)	381, 423, 603
Fnu4HI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
FokI	GGATG	4 cut(s)	178, 1268, 1523, 2014
FriOI	GRGCYC	3 cut(s)	201, 266, 327
Fsp4HI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
FspBI	CTAG	2 cut(s)	927, 1017
GlaI	GCGC	2 cut(s)	567, 848
GluI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
GsaI	CCCAGC	3 cut(s)	269, 1947, 2379
GsuI	CTGGAG	2 cut(s)	590, 1719
HaeII	RGCGCY	1 cut(s)	569
HapII	CCGG	9 cut(s)	74, 276, 419, 556, 659, 894, 1295, 1802, 1970
HgaI	GACGC	2 cut(s)	303, 1143
HhaI	GCGC	2 cut(s)	568, 849
Hin1I	GRCGYC	3 cut(s)	51, 295, 384
Hin1II	CATG	2 cut(s)	1240, 1432
Hin6I	GCGC	2 cut(s)	566, 847
HinP1I	GCGC	2 cut(s)	566, 847
HincII	GTYRAC	3 cut(s)	424, 552, 604
HindII	GTYRAC	3 cut(s)	424, 552, 604
HindIII	AAGCTT	2 cut(s)	1061, 1125
HpaI	GTTAAC	1 cut(s)	552
HpaII	CCGG	9 cut(s)	74, 276, 419, 556, 659, 894, 1295, 1802, 1970
HphI	GGTGA	9 cut(s)	224, 676, 883, 967, 1289, 2090, 2209, 2312, 2353
Hpy166II	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy8I	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
HpyAV	CCTTC	9 cut(s)	203, 233, 788, 1346, 1459, 1501, 1502, 1831, 2291
HpyCH4III	ACNGT	3 cut(s)	1360, 1444, 1856
HpyCH4IV	ACGT	7 cut(s)	51, 378, 384, 456, 2121, 2233, 2424
HpyF10VI	GCNNNNNNNGC	7 cut(s)	266, 398, 734, 1124, 1694, 1703, 1949
HpyF3I	CTNAG	8 cut(s)	406, 435, 607, 1005, 1064, 1611, 1994, 2024
HpySE526I	ACGT	7 cut(s)	51, 378, 384, 456, 2121, 2233, 2424
Hsp92I	GRCGYC	3 cut(s)	51, 295, 384
Hsp92II	CATG	2 cut(s)	1240, 1432
HspAI	GCGC	2 cut(s)	566, 847
Kpn2I	TCCGGA	1 cut(s)	1801
KspAI	GTTAAC	1 cut(s)	552
Kzo9I	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
LmnI	GCTCC	6 cut(s)	322, 559, 586, 628, 1985, 2133
Lsp1109I	GCAGC	3 cut(s)	850, 1693, 1999
LweI	GCATC	3 cut(s)	1195, 1501, 1693
MaeI	CTAG	2 cut(s)	927, 1017
MaeII	ACGT	7 cut(s)	51, 378, 384, 456, 2121, 2233, 2424
MaeIII	GTNAC	1 cut(s)	1277
MalI	GATC	7 cut(s)	231, 873, 1251, 1260, 1617, 2154, 2230
MbiI	CCGCTC	2 cut(s)	913, 1998
MboI	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
MflI	RGATCY	2 cut(s)	871, 1615
MhlI	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
MlsI	TGGCCA	1 cut(s)	347
MluI	ACGCGT	1 cut(s)	1135
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 581, 599, 1748
MmeI	TCCRAC	5 cut(s)	105, 1101, 1737, 2037, 2410
Mox20I	TGGCCA	1 cut(s)	347
MroI	TCCGGA	1 cut(s)	1801
MroXI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
MscI	TGGCCA	1 cut(s)	347
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	1 cut(s)	269
MspCI	CTTAAG	1 cut(s)	1460
MspI	CCGG	9 cut(s)	74, 276, 419, 556, 659, 894, 1295, 1802, 1970
MspR9I	CCNGG	8 cut(s)	276, 556, 557, 599, 810, 1295, 1296, 1488
Mva1269I	GAATGC	1 cut(s)	1176
MvaI	CCWGG	3 cut(s)	599, 810, 1488
MvnI	CGCG	3 cut(s)	819, 849, 1137
MwoI	GCNNNNNNNGC	7 cut(s)	266, 398, 734, 1124, 1694, 1703, 1949
NciI	CCSGG	5 cut(s)	276, 556, 557, 1295, 1296
NcoI	CCATGG	1 cut(s)	1236
NdeII	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
NlaIII	CATG	2 cut(s)	1240, 1432
NlaIV	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
NmeAIII	GCCGAG	1 cut(s)	724
NmuCI	GTSAC	1 cut(s)	1277
PceI	AGGCCT	1 cut(s)	808
PcsI	WCGNNNNNNNCGW	6 cut(s)	57, 60, 131, 165, 384, 453
PctI	GAATGC	1 cut(s)	1176
PdmI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
PfeI	GAWTC	6 cut(s)	577, 897, 1013, 2174, 2269, 2381
PflFI	GACNNNGTC	2 cut(s)	53, 297
PkrI	GCNGC	7 cut(s)	359, 476, 751, 865, 868, 1708, 2014
PleI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 580, 599, 1747
PpsI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 580, 599, 1747
PsiI	TTATAA	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	327
Psp6I	CCWGG	3 cut(s)	597, 808, 1486
PspEI	GGTNACC	1 cut(s)	1277
PspFI	CCCAGC	3 cut(s)	265, 1943, 2375
PspGI	CCWGG	3 cut(s)	597, 808, 1486
PspN4I	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
PspOMI	GGGCCC	1 cut(s)	262
PspPI	GGNCC	8 cut(s)	262, 263, 460, 595, 696, 1320, 1333, 1673
PsuI	RGATCY	2 cut(s)	871, 1615
PsyI	GACNNNGTC	2 cut(s)	53, 297
PvuII	CAGCTG	1 cut(s)	269
SacI	GAGCTC	1 cut(s)	327
SalI	GTCGAC	2 cut(s)	422, 602
SatI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
Sau3AI	GATC	7 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228
Sau96I	GGNCC	8 cut(s)	262, 263, 460, 595, 696, 1320, 1333, 1673
SchI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 581, 599, 1748
ScrFI	CCNGG	8 cut(s)	276, 556, 557, 599, 810, 1295, 1296, 1488
SduI	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
SfaNI	GCATC	3 cut(s)	1195, 1501, 1693
SgrAI	CRCCGGYG	1 cut(s)	658
SinI	GGWCC	2 cut(s)	460, 1320
SmaI	CCCGGG	2 cut(s)	557, 1296
SmlI	CTYRAG	3 cut(s)	94, 180, 1460
SmoI	CTYRAG	3 cut(s)	94, 180, 1460
SseBI	AGGCCT	1 cut(s)	808
SspMI	CTAG	2 cut(s)	927, 1017
SstI	GAGCTC	1 cut(s)	327
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	8 cut(s)	274, 554, 555, 597, 808, 1293, 1294, 1486
StyI	CCWWGG	1 cut(s)	1236
TaaI	ACNGT	3 cut(s)	1360, 1444, 1856
TaiI	ACGT	7 cut(s)	54, 381, 387, 459, 2124, 2236, 2427
TaqII	GACCGA	1 cut(s)	2148
TauI	GCSGC	4 cut(s)	360, 477, 752, 869
TfiI	GAWTC	6 cut(s)	577, 897, 1013, 2174, 2269, 2381
TscAI	CASTG	3 cut(s)	414, 439, 1824
TseFI	GTSAC	1 cut(s)	1277
TseI	GCWGC	3 cut(s)	863, 1706, 2012
Tsp45I	GTSAC	1 cut(s)	1277
TspDTI	ATGAA	4 cut(s)	938, 1365, 2097, 2294
TspGWI	ACGGA	6 cut(s)	26, 327, 335, 1084, 1998, 2131
TspMI	CCCGGG	2 cut(s)	555, 1294
TspRI	CASTG	3 cut(s)	414, 439, 1824
Tth111I	GACNNNGTC	2 cut(s)	53, 297
Vha464I	CTTAAG	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1822
VpaK11BI	GGWCC	2 cut(s)	460, 1320
XagI	CCTNNNNNAGG	1 cut(s)	1328
XapI	RAATTY	3 cut(s)	1478, 2201, 2333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XmaI	CCCGGG	2 cut(s)	555, 1294
XmiI	GTMKAC	3 cut(s)	381, 423, 603
XmnI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
XspI	CTAG	2 cut(s)	927, 1017
ZraI	GACGTC	2 cut(s)	52, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.