Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

233872 .. 236319

Gene Structure 2448 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1003800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGAAACAACGGACAAACCCCCAAACCCCTCCGAGAATCCCCCTAATGATGTCGTCTTCGACGACTCGTCGCCGGAAACCGACCTCACTCCCTCAAGCTCAACCCCTCACGAAAATCACTCGTCGGAAAACCCATCGGCACCTCCCCAAACGATACTCGAAGCCCCCGTTTCGGACTCTCAAGATGACTCCTCCGGGCCCATTCCCGAAGGCGAAGACACCCTTCTCGATCAACGGCACCTCCAAAACCCTATCGAACCGGGCCCAGCTGAACCCGGTCTGCCAGCCAAGAGACGCCGTCGCAGGAAGAAGTTCTTCACGGAGCTCAATGGCTCTCCGTCGTTGGCCAAGAACCGCCGCACCGACCTCAACAAAGACGTCGACGTCGAAGCCCTAATCGCAATATCAGTGGGGTTTCCGGTCGACTCGCTCACGGAGGAGGAAATCGAGGCCAACGTGGTCCCCACCATCGGCGGCGTTGAGCAAGCCAACTATATCGTCGTGAGGAACCACATTCTGTCTCGCTGGAGGTCAAATGTGTCTTTCTGGTTGACCCGGGAGCTGGCGCTGGAGTCGATTCGCTCGGAGCACAAAGGCCTGGTAGACTCAGCTTATGAGTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTTGCACCGGCGGTGAAAGAAGCAAAATTGAGATCCTTTGTCGAGGCCGAGAGGGGCAATGTGGTCATTGTGGGGGCTGGCTTGGCGGGTTTGGTGGCTGCGAGACAATTGGTGTTTTTGGGCTTCAAAGTTGCGGTCTTGGAAGGTAGGAGCAGGCCTGGTGGTCGCGTGAAGACGAGGAAGATGGTAGCCGAGCGTGAGGGAGTGGAGGCTGCGGCGGATCTCGGCGGAAGTGTCCTCACTGGAATCAATGGCAACCCGCTTGGAGTTTTAGCTAGGCAACTGGGTTTGCCTCTTCATAAGGTGAGGGATATTTGCCCGCTTTATTTACCAGATGGGAAAGCTGTGAATTCTGAGATGGATTCTAGTATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGGCACGCAATGATAGAGGAAGTTAAGTCCGTAGATGTTTCGTTAGGGACTGCATTGGAAGCTTTTCAACGCGTTTATAGTGTTGCCCAAGACCCACAGGAGAGGATGCTCTTGGACTGGCATCTTGCTAATTTGGAATATGCAAATGCTTCCTTGATGTCCAATTTGTCCATGGCCTATTGGGATCAGGATGATCCCTATGAGATGGGAGGTGACCATTGTTTTATCCCGGGAGGCAATGAGACTTTTGTGCGGTCCCTTGCAGAGGGCCTTCCAATCTTCTATGAAAGGACTGTGCAAAGTATTCGGTATGGTTCTGATGGGGTTTTGGTTTATGCAAACGGGCAGGAGTTTCGTGGGGACATGGTTCTTTGCACTGTCCCGTTAGGTGTGCTTAAGAAGGGTTCCATTGAATTTGTCCCTGAGCTTCCACAAAGGAAGAAGGATGCAATTCATGGTTTAGGATTTGGATTACTGAATAAGGTTGCCATATTGTTCCCTTATAACTTCTGGGGTGGAGATATTGATACTTTTGGGCACTTGACTGAGGATCTGACTATGAGAGGCGAGTTCTTTCTGTTTTATAGCTACTCTTCTGTATCAGGAGGGCCTCTTCTAGTTGCTCTTGTGGCTGGAGATGCTGCAATTAAGTTTGAATTGATGTCTCCTGTTGAGTCTGTGAATAGGGTGTTGGACATATTAAAGGGTATTTTCAACCCGAAGGGGATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGATGACTTTGCATACGGATCTTATTCATATGTTGCAGTAGGGTCTTCAGGAGATGATTATGATATTCTGGCAGAGAGTATTGGGGATGGGAGAGTGTTCTTTGCTGGAGAGGCTACTAACAAGCAGTATCCGGCAACAATGCACGGAGCTTTTTTGAGTGGGATGAGAGAAGCGGCTAACATACTGAGAGTATCCAAACGGCGGCCAATTATCCCATCAGAAAAGTCAAGTAATGTTGGTGATGAGATGGACGATTTGAATAATTTATTTGACACCCCTGACCTAAGATGTGGGAGCTTCTCTGTTTTGTTTGATCCCCGGTCAAATGAGTGTGATTCTGCTAACTCGCTGTTGAGGGTGACATTTGGAGTGGGAAATATGGACATGGGATCATGTCTCTCTCTTTGCCTATATGGTTTGATTTCGAGGAATCAGGCGAAGAAGTTGAGTGAGGTAGAAGGGGATGGGAACAGGATGAGAATGATAAATGTGGAATTTGGGGTGAGGTTGGGTGGGAGGAAAGGTCTAAGTGGTGCTGGGGAATCATTAATCAGCTACATTAGGGCAGCAAAATCAAAACCGAACGTAGATGGAGGAGTTAAAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

816

Amino Acids

88.85

Weight (kDa)

5.14

Isoelectric Point (pI)

51.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	143 - 216	1.2e-14	SWIRM domain
NAD_binding_8	PF13450	240 - 301	1.8e-10	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	245 - 675	1.3e-87	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
AasI	GACNNNNNNGTC	1 cut(s)	383
AatII	GACGTC	2 cut(s)	381, 387
AccB1I	GGYRCC	2 cut(s)	139, 237
AccI	GTMKAC	3 cut(s)	381, 423, 603
AccII	CGCG	2 cut(s)	819, 1137
AccIII	TCCGGA	1 cut(s)	1801
AclWI	GGATC	8 cut(s)	678, 879, 1253, 1257, 1623, 1864, 2147, 2236
AcoI	YGGCCR	2 cut(s)	345, 2042
AcsI	RAATTY	3 cut(s)	1000, 1478, 2333
AcuI	CTGAAG	1 cut(s)	1869
AcyI	GRCGYC	3 cut(s)	295, 378, 384
AdeI	CACNNNGTG	1 cut(s)	1830
AfiI	CCNNNNNNNGG	5 cut(s)	172, 470, 562, 1330, 2040
AflII	CTTAAG	1 cut(s)	1460
AflIII	ACRYGT	1 cut(s)	1135
AgsI	TTSAA	6 cut(s)	778, 1133, 1478, 1721, 1780, 2098
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	2 cut(s)	597, 808
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	4 cut(s)	327, 591, 633, 1826
Alw26I	GTCTC	6 cut(s)	286, 525, 748, 1301, 1734, 2240
Alw44I	GTGCAC	1 cut(s)	1822
AlwI	GGATC	8 cut(s)	678, 879, 1253, 1257, 1623, 1864, 2147, 2236
Ama87I	CYCGRG	2 cut(s)	555, 1294
Aor13HI	TCCGGA	1 cut(s)	1801
ApaI	GGGCCC	2 cut(s)	201, 266
ApaLI	GTGCAC	1 cut(s)	1822
ApeKI	GCWGC	4 cut(s)	749, 863, 1706, 2405
ApoI	RAATTY	3 cut(s)	1000, 1478, 2333
ArsI	GACNNNNNNTTYG	2 cut(s)	771, 803
AseI	ATTAAT	1 cut(s)	2387
Asp700I	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
AspLEI	GCGC	1 cut(s)	568
AspS9I	GGNCC	8 cut(s)	197, 198, 262, 263, 460, 1320, 1333, 1673
AsuC2I	CCSGG	8 cut(s)	196, 261, 276, 556, 557, 1295, 1296, 2158
AsuHPI	GGTGA	6 cut(s)	676, 967, 1289, 2090, 2209, 2353
AvaI	CYCGRG	2 cut(s)	555, 1294
AvaII	GGWCC	2 cut(s)	460, 1320
BaeGI	GKGCMC	4 cut(s)	201, 266, 1605, 1826
BalI	TGGCCA	1 cut(s)	347
BanI	GGYRCC	2 cut(s)	139, 237
BanII	GRGCYC	3 cut(s)	201, 266, 327
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
BbsI	GAAGAC	4 cut(s)	49, 222, 830, 1875
Bbv12I	GWGCWC	4 cut(s)	327, 591, 633, 1826
BbvI	GCAGC	4 cut(s)	736, 850, 1693, 2417
BceAI	ACGGC	4 cut(s)	251, 282, 649, 2054
BcgI	CGANNNNNNTGC	4 cut(s)	1352, 1386, 1400, 1434
BciT130I	CCWGG	2 cut(s)	599, 810
BciVI	GTATCC	2 cut(s)	1977, 2041
BcnI	CCSGG	8 cut(s)	196, 261, 276, 556, 557, 1295, 1296, 2158
BcoDI	GTCTC	6 cut(s)	286, 525, 748, 1301, 1734, 2240
BfaI	CTAG	3 cut(s)	927, 1017, 1682
BfoI	RGCGCY	1 cut(s)	569
BfrI	CTTAAG	1 cut(s)	1460
BfuI	GTATCC	2 cut(s)	1977, 2041
BisI	GCNGC	9 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2042, 2406
BlsI	GCNGC	9 cut(s)	359, 476, 751, 865, 868, 1708, 2014, 2043, 2407
Bme18I	GGWCC	2 cut(s)	460, 1320
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	2 cut(s)	555, 1294
BmgT120I	GGNCC	8 cut(s)	197, 198, 262, 263, 460, 1320, 1333, 1673
BmiI	GGNNCC	9 cut(s)	141, 199, 239, 264, 462, 509, 1322, 1471, 1806
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	4 cut(s)	1161, 1195, 1501, 1693
BmuI	ACTGGG	1 cut(s)	944
BpiI	GAAGAC	4 cut(s)	49, 222, 830, 1875
BpmI	CTGGAG	4 cut(s)	547, 590, 1719, 1965
Bpu10I	CCTNAGC	2 cut(s)	1064, 1488
BpuEI	CTTGAG	2 cut(s)	79, 165
BpuMI	CCSGG	8 cut(s)	196, 261, 276, 556, 557, 1295, 1296, 2158
BsaHI	GRCGYC	3 cut(s)	295, 378, 384
BsaJI	CCNNGG	4 cut(s)	555, 1236, 1294, 2156
BsaWI	WCCGGW	2 cut(s)	418, 1801
BsaXI	ACNNNNNCTCC	5 cut(s)	225, 255, 2347, 2377, 2427
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 470, 562, 1330, 2040
Bse118I	RCCGGY	1 cut(s)	658
Bse1I	ACTGG	3 cut(s)	898, 939, 1187
Bse3DI	GCAATG	3 cut(s)	715, 1080, 1309
BseAI	TCCGGA	1 cut(s)	1801
BseBI	CCWGG	2 cut(s)	599, 810
BseDI	CCNNGG	4 cut(s)	555, 1236, 1294, 2156
BseGI	GGATG	8 cut(s)	1176, 1261, 1516, 1846, 1930, 2007, 2308, 2319
BseLI	CCNNNNNNNGG	5 cut(s)	172, 470, 562, 1330, 2040
BseMI	GCAATG	3 cut(s)	715, 1080, 1309
BseMII	CTCAG	5 cut(s)	621, 996, 1479, 1602, 2015
BseNI	ACTGG	3 cut(s)	898, 939, 1187
BseRI	GAGGAG	3 cut(s)	181, 452, 2448
BseSI	GKGCMC	4 cut(s)	201, 266, 1605, 1826
BseXI	GCAGC	4 cut(s)	736, 850, 1693, 2417
BseYI	CCCAGC	2 cut(s)	265, 2375
Bsh1236I	CGCG	2 cut(s)	819, 1137
Bsh1285I	CGRYCG	1 cut(s)	423
BshNI	GGYRCC	2 cut(s)	139, 237
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	4 cut(s)	327, 591, 633, 1826
BsiHKCI	CYCGRG	2 cut(s)	555, 1294
BslFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BslI	CCNNNNNNNGG	5 cut(s)	172, 470, 562, 1330, 2040
BsmAI	GTCTC	6 cut(s)	286, 525, 748, 1301, 1734, 2240
BsmBI	CGTCTC	1 cut(s)	286
BsmFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BsoBI	CYCGRG	2 cut(s)	555, 1294
Bsp120I	GGGCCC	2 cut(s)	197, 262
Bsp1286I	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
Bsp13I	TCCGGA	1 cut(s)	1801
Bsp143I	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
Bsp19I	CCATGG	1 cut(s)	1236
BspCNI	CTCAG	5 cut(s)	620, 997, 1480, 1603, 2016
BspEI	TCCGGA	1 cut(s)	1801
BspFNI	CGCG	2 cut(s)	819, 1137
BspLI	GGNNCC	9 cut(s)	141, 199, 239, 264, 462, 509, 1322, 1471, 1806
BspPI	GGATC	8 cut(s)	678, 879, 1253, 1257, 1623, 1864, 2147, 2236
BspT107I	GGYRCC	2 cut(s)	139, 237
BspTI	CTTAAG	1 cut(s)	1460
BsrDI	GCAATG	3 cut(s)	715, 1080, 1309
BsrFI	RCCGGY	1 cut(s)	658
BsrI	ACTGG	3 cut(s)	898, 939, 1187
BssAI	RCCGGY	1 cut(s)	658
BssECI	CCNNGG	4 cut(s)	555, 1236, 1294, 2156
BssMI	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
BssNI	GRCGYC	3 cut(s)	295, 378, 384
BssT1I	CCWWGG	1 cut(s)	1236
Bst2UI	CCWGG	2 cut(s)	599, 810
Bst4CI	ACNGT	2 cut(s)	1360, 1444
Bst6I	CTCTTC	3 cut(s)	951, 1663, 1683
BstACI	GRCGYC	3 cut(s)	295, 378, 384
BstAFI	CTTAAG	1 cut(s)	1460
BstC8I	GCNNGC	8 cut(s)	285, 486, 564, 654, 730, 806, 971, 1071
BstDEI	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
BstDSI	CCRYGG	1 cut(s)	1236
BstEII	GGTNACC	1 cut(s)	1277
BstENI	CCTNNNNNAGG	1 cut(s)	1328
BstF5I	GGATG	8 cut(s)	1176, 1261, 1516, 1846, 1930, 2007, 2308, 2319
BstFNI	CGCG	2 cut(s)	819, 1137
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	1 cut(s)	568
BstKTI	GATC	9 cut(s)	232, 686, 874, 1252, 1261, 1618, 1859, 2155, 2231
BstMAI	GTCTC	6 cut(s)	286, 525, 748, 1301, 1734, 2240
BstMBI	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
BstMCI	CGRYCG	1 cut(s)	423
BstMWI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
BstNI	CCWGG	2 cut(s)	599, 810
BstPI	GGTNACC	1 cut(s)	1277
BstSLI	GKGCMC	4 cut(s)	201, 266, 1605, 1826
BstUI	CGCG	2 cut(s)	819, 1137
BstV1I	GCAGC	4 cut(s)	736, 850, 1693, 2417
BstV2I	GAAGAC	4 cut(s)	49, 222, 830, 1875
BstX2I	RGATCY	4 cut(s)	683, 871, 1615, 1856
BstYI	RGATCY	4 cut(s)	683, 871, 1615, 1856
BsuI	GTATCC	2 cut(s)	1977, 2041
BtgI	CCRYGG	1 cut(s)	1236
BtsCI	GGATG	8 cut(s)	1176, 1261, 1516, 1846, 1930, 2007, 2308, 2319
BtsI	GCAGTG	1 cut(s)	1824
BtsIMutI	CAGTG	4 cut(s)	414, 891, 1440, 1824
Cac8I	GCNNGC	8 cut(s)	285, 486, 564, 654, 730, 806, 971, 1071
CfoI	GCGC	1 cut(s)	568
Cfr10I	RCCGGY	1 cut(s)	658
Cfr13I	GGNCC	8 cut(s)	197, 198, 262, 263, 460, 1320, 1333, 1673
Cfr9I	CCCGGG	2 cut(s)	555, 1294
CseI	GACGC	1 cut(s)	303
CspCI	CAANNNNNGTGG	2 cut(s)	390, 425
CviAII	CATG	5 cut(s)	1237, 1429, 1520, 2224, 2232
DdeI	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
DpnI	GATC	9 cut(s)	231, 685, 873, 1251, 1260, 1617, 1858, 2154, 2230
DpnII	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
DraIII	CACNNNGTG	1 cut(s)	1830
DrdI	GACNNNNNNGTC	1 cut(s)	383
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	1 cut(s)	383
EaeI	YGGCCR	2 cut(s)	345, 2042
Eam1104I	CTCTTC	3 cut(s)	951, 1663, 1683
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	951, 1663, 1683
EciI	GGCGGA	2 cut(s)	884, 894
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	1 cut(s)	1236
Eco147I	AGGCCT	2 cut(s)	597, 808
Eco24I	GRGCYC	3 cut(s)	201, 266, 327
Eco47I	GGWCC	2 cut(s)	460, 1320
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	1869
Eco88I	CYCGRG	2 cut(s)	555, 1294
Eco91I	GGTNACC	1 cut(s)	1277
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1328
EcoO109I	RGGNCCY	2 cut(s)	1333, 1673
EcoO65I	GGTNACC	1 cut(s)	1277
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	2 cut(s)	597, 808
EcoT14I	CCWWGG	1 cut(s)	1236
EcoT38I	GRGCYC	3 cut(s)	201, 266, 327
ErhI	CCWWGG	1 cut(s)	1236
Esp3I	CGTCTC	1 cut(s)	286
FaeI	CATG	5 cut(s)	1240, 1432, 1523, 2227, 2235
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 299, 331, 1829, 1861
FaqI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
FatI	CATG	5 cut(s)	1236, 1428, 1519, 2223, 2231
FauI	CCCGC	3 cut(s)	730, 918, 978
FauNDI	CATATG	1 cut(s)	1867
FblI	GTMKAC	3 cut(s)	381, 423, 603
Fnu4HI	GCNGC	9 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2042, 2406
FokI	GGATG	8 cut(s)	1183, 1268, 1523, 1853, 1937, 2014, 2315, 2326
FriOI	GRGCYC	3 cut(s)	201, 266, 327
Fsp4HI	GCNGC	9 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2042, 2406
FspBI	CTAG	3 cut(s)	927, 1017, 1682
GlaI	GCGC	1 cut(s)	567
GluI	GCNGC	9 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2042, 2406
GsaI	CCCAGC	2 cut(s)	269, 2379
GsuI	CTGGAG	4 cut(s)	547, 590, 1719, 1965
HaeII	RGCGCY	1 cut(s)	569
HgaI	GACGC	1 cut(s)	303
HhaI	GCGC	1 cut(s)	568
Hin1I	GRCGYC	3 cut(s)	295, 378, 384
Hin1II	CATG	5 cut(s)	1240, 1432, 1523, 2227, 2235
Hin6I	GCGC	1 cut(s)	566
HinP1I	GCGC	1 cut(s)	566
HincII	GTYRAC	3 cut(s)	382, 424, 552
HindII	GTYRAC	3 cut(s)	382, 424, 552
HindIII	AAGCTT	2 cut(s)	1061, 1125
HphI	GGTGA	6 cut(s)	676, 967, 1289, 2090, 2209, 2353
Hpy166II	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy188I	TCNGA	8 cut(s)	34, 127, 175, 586, 1006, 1384, 1620, 2059
Hpy188III	TCNNGA	9 cut(s)	110, 182, 206, 227, 502, 1253, 1668, 1802, 1887
Hpy8I	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy99I	CGWCG	9 cut(s)	65, 73, 127, 303, 343, 383, 386, 389, 503
HpyAV	CCTTC	9 cut(s)	203, 233, 788, 1346, 1459, 1501, 1780, 1831, 2291
HpyCH4III	ACNGT	2 cut(s)	1360, 1444
HpyCH4IV	ACGT	4 cut(s)	378, 384, 456, 2424
HpyF10VI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
HpyF3I	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
HpySE526I	ACGT	4 cut(s)	378, 384, 456, 2424
Hsp92I	GRCGYC	3 cut(s)	295, 378, 384
Hsp92II	CATG	5 cut(s)	1240, 1432, 1523, 2227, 2235
HspAI	GCGC	1 cut(s)	566
Kpn2I	TCCGGA	1 cut(s)	1801
Kzo9I	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
LmnI	GCTCC	7 cut(s)	322, 559, 586, 628, 801, 1985, 2133
Lsp1109I	GCAGC	4 cut(s)	736, 850, 1693, 2417
LweI	GCATC	4 cut(s)	1161, 1195, 1501, 1693
MaeI	CTAG	3 cut(s)	927, 1017, 1682
MaeII	ACGT	4 cut(s)	378, 384, 456, 2424
MaeIII	GTNAC	2 cut(s)	1277, 2197
MalI	GATC	9 cut(s)	231, 685, 873, 1251, 1260, 1617, 1858, 2154, 2230
MboI	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
MfeI	CAATTG	1 cut(s)	758
MflI	RGATCY	4 cut(s)	683, 871, 1615, 1856
MhlI	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
MlsI	TGGCCA	1 cut(s)	347
MluI	ACGCGT	1 cut(s)	1135
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	7 cut(s)	59, 170, 182, 419, 581, 599, 1748
MmeI	TCCRAC	2 cut(s)	105, 1737
Mox20I	TGGCCA	1 cut(s)	347
MroI	TCCGGA	1 cut(s)	1801
MroXI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
MscI	TGGCCA	1 cut(s)	347
MseI	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	1 cut(s)	269
MspCI	CTTAAG	1 cut(s)	1460
MunI	CAATTG	1 cut(s)	758
MvaI	CCWGG	2 cut(s)	599, 810
MvnI	CGCG	2 cut(s)	819, 1137
MwoI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
NciI	CCSGG	8 cut(s)	196, 261, 276, 556, 557, 1295, 1296, 2158
NcoI	CCATGG	1 cut(s)	1236
NdeI	CATATG	1 cut(s)	1867
NdeII	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
NlaIII	CATG	5 cut(s)	1240, 1432, 1523, 2227, 2235
NlaIV	GGNNCC	9 cut(s)	141, 199, 239, 264, 462, 509, 1322, 1471, 1806
NmeAIII	GCCGAG	3 cut(s)	724, 855, 868
NmuCI	GTSAC	2 cut(s)	1277, 2197
PceI	AGGCCT	2 cut(s)	597, 808
PcsI	WCGNNNNNNNCGW	4 cut(s)	60, 165, 384, 453
PdmI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
PfeI	GAWTC	7 cut(s)	37, 577, 897, 1013, 2174, 2269, 2381
PflFI	GACNNNGTC	1 cut(s)	297
PkrI	GCNGC	9 cut(s)	359, 476, 751, 865, 868, 1708, 2014, 2043, 2407
PleI	GAGTC	7 cut(s)	59, 170, 182, 419, 580, 599, 1747
PpsI	GAGTC	7 cut(s)	59, 170, 182, 419, 580, 599, 1747
PshBI	ATTAAT	1 cut(s)	2387
PsiI	TTATAA	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	327
Psp6I	CCWGG	2 cut(s)	597, 808
PspEI	GGTNACC	1 cut(s)	1277
PspFI	CCCAGC	2 cut(s)	265, 2375
PspGI	CCWGG	2 cut(s)	597, 808
PspN4I	GGNNCC	9 cut(s)	141, 199, 239, 264, 462, 509, 1322, 1471, 1806
PspOMI	GGGCCC	2 cut(s)	197, 262
PspPI	GGNCC	8 cut(s)	197, 198, 262, 263, 460, 1320, 1333, 1673
PsuI	RGATCY	4 cut(s)	683, 871, 1615, 1856
PsyI	GACNNNGTC	1 cut(s)	297
PvuII	CAGCTG	1 cut(s)	269
SacI	GAGCTC	1 cut(s)	327
SalI	GTCGAC	2 cut(s)	380, 422
SaqAI	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
SatI	GCNGC	9 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2042, 2406
Sau3AI	GATC	9 cut(s)	229, 683, 871, 1249, 1258, 1615, 1856, 2152, 2228
Sau96I	GGNCC	8 cut(s)	197, 198, 262, 263, 460, 1320, 1333, 1673
SchI	GAGTC	7 cut(s)	59, 170, 182, 419, 581, 599, 1748
SduI	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
SfaNI	GCATC	4 cut(s)	1161, 1195, 1501, 1693
SgrAI	CRCCGGYG	1 cut(s)	658
SgrDI	CGTCGACG	1 cut(s)	380
SinI	GGWCC	2 cut(s)	460, 1320
SmaI	CCCGGG	2 cut(s)	557, 1296
SmlI	CTYRAG	3 cut(s)	94, 180, 1460
SmoI	CTYRAG	3 cut(s)	94, 180, 1460
SseBI	AGGCCT	2 cut(s)	597, 808
SspMI	CTAG	3 cut(s)	927, 1017, 1682
SstI	GAGCTC	1 cut(s)	327
StuI	AGGCCT	2 cut(s)	597, 808
StyI	CCWWGG	1 cut(s)	1236
TaaI	ACNGT	2 cut(s)	1360, 1444
TaiI	ACGT	4 cut(s)	381, 387, 459, 2427
TauI	GCSGC	5 cut(s)	360, 477, 869, 2015, 2044
TfiI	GAWTC	7 cut(s)	37, 577, 897, 1013, 2174, 2269, 2381
Tru1I	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
Tru9I	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
TscAI	CASTG	4 cut(s)	414, 898, 1447, 1824
TseFI	GTSAC	2 cut(s)	1277, 2197
TseI	GCWGC	4 cut(s)	749, 863, 1706, 2405
Tsp45I	GTSAC	2 cut(s)	1277, 2197
TspDTI	ATGAA	4 cut(s)	938, 1365, 1508, 1854
TspGWI	ACGGA	7 cut(s)	26, 327, 335, 449, 1084, 1869, 1998
TspMI	CCCGGG	2 cut(s)	555, 1294
TspRI	CASTG	4 cut(s)	414, 898, 1447, 1824
Tth111I	GACNNNGTC	1 cut(s)	297
Vha464I	CTTAAG	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1822
VpaK11BI	GGWCC	2 cut(s)	460, 1320
VspI	ATTAAT	1 cut(s)	2387
XagI	CCTNNNNNAGG	1 cut(s)	1328
XapI	RAATTY	3 cut(s)	1000, 1478, 2333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XmaI	CCCGGG	2 cut(s)	555, 1294
XmiI	GTMKAC	3 cut(s)	381, 423, 603
XmnI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
XspI	CTAG	3 cut(s)	927, 1017, 1682
ZraI	GACGTC	2 cut(s)	379, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.