Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

312771 .. 315309

Gene Structure 2539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g00320.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGAAACAACGGACAACCCCCAAAACCCCTCCGATAATCCCCCTAACGACGTCGTCTTCGATGACTCGTCGCCGGAAACCGACCTCACTCCCTCAAGCTCGACCCCTCACGAAAACCACTCGTCGGAAAACCCGTCGGCACCTCCCCAAACGACTCTCGAAGCCCCCGTTTCGGACTCTCAAGATGACTCATCCGAGCCCATTCTCGAAGGCGAAGACACCCTTCTCGATCAACAGCACCTCCAAAACCCTATCGAACCGGGCCCAGCTGAACCCGGTCTGCCAGCGAAGAGACGCCGTCGCAGGAAGAAGTTCTTCACGGAGCTCAATGGCTCTCCATCGTTGGCCAAGAACCGCCGCACCGACCTTAACAAAGACGTAGACGTCGAAGCCCTAATCGCAATCTCAGTGGGGTTTCCGGTCGACTCACTCACTGAGGAGGAAATTGAGGCCAACGTGGTCCCCACCATCGGCGGCGTTGAGCAAGCCAACTATATCGTCGTGAGGAACCACATTCTGTCTCGGTGGAGGTCAAATGTGTCTTTCTGGTTAACCCGGGAGCTGGCGCTGGAGTCGATTCGCTCGGAGCACAAAGCCCTGGTCGACTCAGCTTACGACTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTTGCACCGGCGGTGAAAGATGCAAAATTGAGGTCGTTTGACGGGGCCGAGAGGGGCAATGTGGTCATTGTGGGGGCTGGCTTGGCGGGTTTGGTGGCGGCGAGGCAATTGGTGTTTTTGGGCTTCAAAGTTGTGGTCTTGGAAGGTAGAAGCAGGCCTGGTGGTCGCGTGAAGACGAGGAAGATGGTGGGCGAGCGCGAGGGAGTGGAGGCTGCAGCGGATCTCGGGGGAAGTGTTCTCACCGGAATCAATGGAAACCCGCTCGGAGTTTTAGCTAGGCAACTGGGTTTGCCTCTTCATAAGGTGAGGGATATTTGCCCGCTCTATTTACCAGATGGGAAAACTGTGAATTCTGAGATGGATTCTAGTATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGGCACGCAATGATTGAAGAAGTTAAGTCCGTAGATGTTCCATTAGGGACTGCGTTGGAAGCTTTTCGACGCGTTTATAGTGTTGCACGAGACCCGCAGGAGAGAATGCTCTTGGACTGGCATCTTGCTAATTTGGAATATGCTAATGCTTCCTTGATGTCCAATTTGTCCATGGCCTATTGGGATCATGATGATCCCTATGAGATGGGAGGTGACCATTGTTTTATCCCGGGAGGCAATGAGACTTTTGTGCGGTCCCTTGCAGAGGGCCTTCCAATCTTCTATGAAAGGACTGTGCAGAGTATTCGGTACGGTTCTGATGGGGTTTTGGTTTATGCAAACGGGCAGGAGTTTCGTGGGGACATGGTTCTTTGCACAGTCCCATTAGGCGTGCTTAAGAAGGGTTCCATTGAATTTGTCCCTCAGCTTCCACAAAGGAAGAAGGATGCAATTCAGAGTATAGGATTTGGATTACTGAATAAGGTTGCCATATTGTTCCCTTATAACTTCTGGGGTGGAGATATTGATACTTTTGGGCATTTGACTGAGGATCCGAGAATGAGAGGCGAGTTCTTTCTGTTTTATAGCTACTCTTCTGTATCAGGAGGGCCTCTTCTGGTTGCTCTTGTGGCTGGAGATGCTGCAATTAAGTTTGAGTTGATGTCTCCTGTTGAGTCTGTGAATAGGGTGTTGGACATATTAAGGGGTATTTTCAACCCGAAAGGGATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGACGACTTTGCATACGGTTCGTATTCTTACGTTGCAGTAGGTTCTTCAGGAGATGATTATGATATTCTGGCAGAGAGTATTGGGGATGGGAGAGTGTTCTTTGCTGGGGAGGCCACTAACAAGCAGTATCCGGCAACAATGCATGGAGCTTTTCTGAGTGGGATGAGAGAGGCTGCTAACATACTGAGAGTAGCCAAAAAGCGGTCAATTATCCCGTTGGAAAAACCAAGTAATGTTGGTGATGAAATGGACGATTTGAATAAGTTATTTGACACCCCTGACGTAAGATGTGGGAGCTTCTCCGTTTTGTTTGATCCTCGGTCAAATGAGTTTGATTCTGCCAACTCGCTGTTGAGGGTGAAATTTGGAGTGGGAAATATGGAGGTGGGATCACGTCTCTCTCTTTGTCTGTATGGCTTGATTTCGAGGAATCAGGCGATGAAGTTGAGTGAGGTAGAGGGTGATGGGAACAAGATGAGAATGATAAATGTGGAATTTGGGGTGAGGTTGGTTGGGAGGAAAGTTGATTGGATCATTGATTTGAGCAGCTGGATGGAATCCATTGTCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

804

Amino Acids

88.25

Weight (kDa)

5.07

Isoelectric Point (pI)

52.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
AasI	GACNNNNNNGTC	1 cut(s)	383
AatII	GACGTC	2 cut(s)	54, 387
AccB1I	GGYRCC	1 cut(s)	139
AccBSI	CCGCTC	2 cut(s)	913, 973
AccI	GTMKAC	3 cut(s)	381, 423, 603
AccII	CGCG	3 cut(s)	819, 849, 1137
AccIII	TCCGGA	1 cut(s)	1801
AclWI	GGATC	8 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236, 2378
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	4 cut(s)	1000, 1478, 2201, 2333
AcuI	CTGAAG	1 cut(s)	1869
AcyI	GRCGYC	3 cut(s)	51, 295, 384
AdeI	CACNNNGTG	1 cut(s)	1830
AfaI	GTAC	1 cut(s)	1376
AfiI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
AflII	CTTAAG	1 cut(s)	1460
AflIII	ACRYGT	1 cut(s)	1135
AgsI	TTSAA	5 cut(s)	778, 1082, 1478, 1780, 2098
AjiI	CACGTC	1 cut(s)	2234
AjnI	CCWGG	2 cut(s)	597, 808
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	4 cut(s)	327, 591, 633, 1826
Alw26I	GTCTC	6 cut(s)	286, 525, 1149, 1301, 1734, 2240
Alw44I	GTGCAC	1 cut(s)	1822
AlwI	GGATC	8 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236, 2378
Ama87I	CYCGRG	3 cut(s)	555, 875, 1294
Aor13HI	TCCGGA	1 cut(s)	1801
AoxI	GGCC	9 cut(s)	262, 345, 450, 696, 806, 1239, 1333, 1673, 1950
ApaI	GGGCCC	1 cut(s)	266
ApaLI	GTGCAC	1 cut(s)	1822
ApeKI	GCWGC	5 cut(s)	863, 866, 1706, 2012, 2385
ApoI	RAATTY	4 cut(s)	1000, 1478, 2201, 2333
ArsI	GACNNNNNNTTYG	8 cut(s)	41, 73, 585, 617, 668, 700, 771, 803
Asp700I	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
AspLEI	GCGC	2 cut(s)	568, 849
AspS9I	GGNCC	7 cut(s)	262, 263, 460, 696, 1320, 1333, 1673
AsuC2I	CCSGG	6 cut(s)	261, 276, 556, 557, 1295, 1296
AsuHPI	GGTGA	8 cut(s)	676, 883, 967, 1289, 2090, 2209, 2312, 2353
AvaI	CYCGRG	3 cut(s)	555, 875, 1294
AvaII	GGWCC	2 cut(s)	460, 1320
BaeGI	GKGCMC	2 cut(s)	266, 1826
BalI	TGGCCA	1 cut(s)	347
BamHI	GGATCC	1 cut(s)	1615
BanI	GGYRCC	1 cut(s)	139
BanII	GRGCYC	3 cut(s)	201, 266, 327
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
BauI	CACGAG	1 cut(s)	1152
BbsI	GAAGAC	3 cut(s)	49, 222, 830
Bbv12I	GWGCWC	4 cut(s)	327, 591, 633, 1826
BbvCI	CCTCAGC	1 cut(s)	1488
BbvI	GCAGC	5 cut(s)	850, 878, 1693, 1999, 2397
BceAI	ACGGC	2 cut(s)	282, 649
BcgI	CGANNNNNNTGC	6 cut(s)	1352, 1386, 1400, 1434, 1839, 1873
BciT130I	CCWGG	2 cut(s)	599, 810
BciVI	GTATCC	1 cut(s)	1977
BcnI	CCSGG	6 cut(s)	261, 276, 556, 557, 1295, 1296
BcoDI	GTCTC	6 cut(s)	286, 525, 1149, 1301, 1734, 2240
BfaI	CTAG	2 cut(s)	927, 1017
BfmI	CTRYAG	1 cut(s)	864
BfoI	RGCGCY	1 cut(s)	569
BfrI	CTTAAG	1 cut(s)	1460
BfuI	GTATCC	1 cut(s)	1977
BisI	GCNGC	8 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2386
BlsI	GCNGC	8 cut(s)	359, 476, 751, 865, 868, 1708, 2014, 2387
Bme1390I	CCNGG	8 cut(s)	261, 276, 556, 557, 599, 810, 1295, 1296
Bme18I	GGWCC	2 cut(s)	460, 1320
BmeT110I	CYCGRG	3 cut(s)	555, 875, 1294
BmgBI	CACGTC	1 cut(s)	2234
BmgT120I	GGNCC	7 cut(s)	262, 263, 460, 696, 1320, 1333, 1673
BmiI	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
BmrFI	CCNGG	8 cut(s)	261, 276, 556, 557, 599, 810, 1295, 1296
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	4 cut(s)	661, 1195, 1501, 1693
BmuI	ACTGGG	1 cut(s)	944
BpiI	GAAGAC	3 cut(s)	49, 222, 830
BpmI	CTGGAG	2 cut(s)	590, 1719
Bpu10I	CCTNAGC	2 cut(s)	1064, 1488
BpuEI	CTTGAG	2 cut(s)	79, 165
BpuMI	CCSGG	6 cut(s)	261, 276, 556, 557, 1295, 1296
BsaHI	GRCGYC	3 cut(s)	51, 295, 384
BsaI	GGTCTC	1 cut(s)	1149
BsaJI	CCNNGG	5 cut(s)	555, 597, 1236, 1294, 2156
BsaWI	WCCGGW	3 cut(s)	418, 893, 1801
BsaXI	ACNNNNNCTCC	2 cut(s)	225, 255
Bsc4I	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
Bse118I	RCCGGY	1 cut(s)	658
Bse1I	ACTGG	2 cut(s)	939, 1187
Bse3DI	GCAATG	3 cut(s)	715, 1080, 1309
BseAI	TCCGGA	1 cut(s)	1801
BseBI	CCWGG	2 cut(s)	599, 810
BseDI	CCNNGG	5 cut(s)	555, 597, 1236, 1294, 2156
BseGI	GGATG	5 cut(s)	191, 1516, 1930, 2007, 2397
BseLI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
BseMI	GCAATG	3 cut(s)	715, 1080, 1309
BseMII	CTCAG	8 cut(s)	420, 426, 621, 996, 1502, 1602, 1985, 2015
BseNI	ACTGG	2 cut(s)	939, 1187
BseRI	GAGGAG	1 cut(s)	452
BseSI	GKGCMC	2 cut(s)	266, 1826
BseXI	GCAGC	5 cut(s)	850, 878, 1693, 1999, 2397
BseYI	CCCAGC	2 cut(s)	265, 1943
BsgI	GTGCAG	1 cut(s)	1382
Bsh1236I	CGCG	3 cut(s)	819, 849, 1137
Bsh1285I	CGRYCG	1 cut(s)	423
BshFI	GGCC	9 cut(s)	264, 347, 452, 698, 808, 1241, 1335, 1675, 1952
BshNI	GGYRCC	1 cut(s)	139
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	4 cut(s)	327, 591, 633, 1826
BsiHKCI	CYCGRG	3 cut(s)	555, 875, 1294
BslFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BslI	CCNNNNNNNGG	6 cut(s)	124, 172, 470, 562, 1330, 2040
BsmAI	GTCTC	6 cut(s)	286, 525, 1149, 1301, 1734, 2240
BsmBI	CGTCTC	2 cut(s)	286, 2240
BsmFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BsmI	GAATGC	1 cut(s)	1176
BsnI	GGCC	9 cut(s)	264, 347, 452, 698, 808, 1241, 1335, 1675, 1952
Bso31I	GGTCTC	1 cut(s)	1149
BsoBI	CYCGRG	3 cut(s)	555, 875, 1294
Bsp120I	GGGCCC	1 cut(s)	262
Bsp1286I	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
Bsp13I	TCCGGA	1 cut(s)	1801
Bsp143I	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
Bsp19I	CCATGG	1 cut(s)	1236
BspANI	GGCC	9 cut(s)	264, 347, 452, 698, 808, 1241, 1335, 1675, 1952
BspCNI	CTCAG	8 cut(s)	419, 427, 620, 997, 1501, 1603, 1986, 2016
BspEI	TCCGGA	1 cut(s)	1801
BspFNI	CGCG	3 cut(s)	819, 849, 1137
BspHI	TCATGA	1 cut(s)	1252
BspLI	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
BspMAI	CTGCAG	1 cut(s)	868
BspPI	GGATC	8 cut(s)	879, 1253, 1257, 1610, 1623, 2147, 2236, 2378
BspT107I	GGYRCC	1 cut(s)	139
BspTI	CTTAAG	1 cut(s)	1460
BspTNI	GGTCTC	1 cut(s)	1149
BsrBI	CCGCTC	2 cut(s)	913, 973
BsrDI	GCAATG	3 cut(s)	715, 1080, 1309
BsrFI	RCCGGY	1 cut(s)	658
BsrI	ACTGG	2 cut(s)	939, 1187
BssAI	RCCGGY	1 cut(s)	658
BssECI	CCNNGG	5 cut(s)	555, 597, 1236, 1294, 2156
BssMI	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
BssNI	GRCGYC	3 cut(s)	51, 295, 384
BssSI	CACGAG	1 cut(s)	1152
BssT1I	CCWWGG	1 cut(s)	1236
Bst2BI	CACGAG	1 cut(s)	1152
Bst2UI	CCWGG	2 cut(s)	599, 810
Bst4CI	ACNGT	5 cut(s)	997, 1360, 1379, 1444, 1856
Bst6I	CTCTTC	4 cut(s)	284, 951, 1663, 1683
BstACI	GRCGYC	3 cut(s)	51, 295, 384
BstAFI	CTTAAG	1 cut(s)	1460
BstDEI	CTNAG	9 cut(s)	406, 435, 607, 1005, 1064, 1488, 1611, 1994, 2024
BstDSI	CCRYGG	1 cut(s)	1236
BstEII	GGTNACC	1 cut(s)	1277
BstENI	CCTNNNNNAGG	1 cut(s)	1328
BstF5I	GGATG	5 cut(s)	191, 1516, 1930, 2007, 2397
BstFNI	CGCG	3 cut(s)	819, 849, 1137
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	2 cut(s)	568, 849
BstKTI	GATC	8 cut(s)	232, 874, 1252, 1261, 1618, 2155, 2231, 2373
BstMAI	GTCTC	6 cut(s)	286, 525, 1149, 1301, 1734, 2240
BstMBI	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
BstMCI	CGRYCG	1 cut(s)	423
BstMWI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
BstNI	CCWGG	2 cut(s)	599, 810
BstPI	GGTNACC	1 cut(s)	1277
BstSCI	CCNGG	8 cut(s)	259, 274, 554, 555, 597, 808, 1293, 1294
BstSFI	CTRYAG	1 cut(s)	864
BstSLI	GKGCMC	2 cut(s)	266, 1826
BstUI	CGCG	3 cut(s)	819, 849, 1137
BstV1I	GCAGC	5 cut(s)	850, 878, 1693, 1999, 2397
BstV2I	GAAGAC	3 cut(s)	49, 222, 830
BstX2I	RGATCY	2 cut(s)	871, 1615
BstYI	RGATCY	2 cut(s)	871, 1615
BsuI	GTATCC	1 cut(s)	1977
BsuRI	GGCC	9 cut(s)	264, 347, 452, 698, 808, 1241, 1335, 1675, 1952
BtgI	CCRYGG	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	2291
BtrI	CACGTC	1 cut(s)	2234
BtsCI	GGATG	5 cut(s)	191, 1516, 1930, 2007, 2397
BtsI	GCAGTG	1 cut(s)	1824
BtsIMutI	CAGTG	3 cut(s)	414, 432, 1824
CciI	TCATGA	1 cut(s)	1252
CfoI	GCGC	2 cut(s)	568, 849
Cfr10I	RCCGGY	1 cut(s)	658
Cfr13I	GGNCC	7 cut(s)	262, 263, 460, 696, 1320, 1333, 1673
Cfr9I	CCCGGG	2 cut(s)	555, 1294
CseI	GACGC	2 cut(s)	303, 1143
Csp6I	GTAC	1 cut(s)	1375
CspCI	CAANNNNNGTGG	2 cut(s)	390, 425
CviAII	CATG	4 cut(s)	1237, 1253, 1429, 1982
CviQI	GTAC	1 cut(s)	1375
DdeI	CTNAG	9 cut(s)	406, 435, 607, 1005, 1064, 1488, 1611, 1994, 2024
DpnI	GATC	8 cut(s)	231, 873, 1251, 1260, 1617, 2154, 2230, 2372
DpnII	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
DraIII	CACNNNGTG	1 cut(s)	1830
DrdI	GACNNNNNNGTC	1 cut(s)	383
DseDI	GACNNNNNNGTC	1 cut(s)	383
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	4 cut(s)	284, 951, 1663, 1683
EarI	CTCTTC	4 cut(s)	284, 951, 1663, 1683
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	1 cut(s)	1236
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	3 cut(s)	201, 266, 327
Eco31I	GGTCTC	1 cut(s)	1149
Eco47I	GGWCC	2 cut(s)	460, 1320
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	1869
Eco88I	CYCGRG	3 cut(s)	555, 875, 1294
Eco91I	GGTNACC	1 cut(s)	1277
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1328
EcoO109I	RGGNCCY	2 cut(s)	1333, 1673
EcoO65I	GGTNACC	1 cut(s)	1277
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	2 cut(s)	597, 808
EcoT14I	CCWWGG	1 cut(s)	1236
EcoT22I	ATGCAT	1 cut(s)	1983
EcoT38I	GRGCYC	3 cut(s)	201, 266, 327
ErhI	CCWWGG	1 cut(s)	1236
Esp3I	CGTCTC	2 cut(s)	286, 2240
FaeI	CATG	4 cut(s)	1240, 1256, 1432, 1985
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 299, 331, 1829, 1861
FaqI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
FatI	CATG	4 cut(s)	1236, 1252, 1428, 1981
FauI	CCCGC	4 cut(s)	730, 918, 978, 1167
FblI	GTMKAC	3 cut(s)	381, 423, 603
Fnu4HI	GCNGC	8 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2386
FokI	GGATG	5 cut(s)	178, 1523, 1937, 2014, 2404
FriOI	GRGCYC	3 cut(s)	201, 266, 327
Fsp4HI	GCNGC	8 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2386
FspBI	CTAG	2 cut(s)	927, 1017
GlaI	GCGC	2 cut(s)	567, 848
GluI	GCNGC	8 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2386
GsaI	CCCAGC	2 cut(s)	269, 1947
GsuI	CTGGAG	2 cut(s)	590, 1719
HaeII	RGCGCY	1 cut(s)	569
HaeIII	GGCC	9 cut(s)	264, 347, 452, 698, 808, 1241, 1335, 1675, 1952
HgaI	GACGC	2 cut(s)	303, 1143
HhaI	GCGC	2 cut(s)	568, 849
Hin1I	GRCGYC	3 cut(s)	51, 295, 384
Hin1II	CATG	4 cut(s)	1240, 1256, 1432, 1985
Hin6I	GCGC	2 cut(s)	566, 847
HinP1I	GCGC	2 cut(s)	566, 847
HincII	GTYRAC	3 cut(s)	424, 552, 604
HindII	GTYRAC	3 cut(s)	424, 552, 604
HindIII	AAGCTT	2 cut(s)	1061, 1125
HpaI	GTTAAC	1 cut(s)	552
HphI	GGTGA	8 cut(s)	676, 883, 967, 1289, 2090, 2209, 2312, 2353
Hpy166II	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy8I	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy99I	CGWCG	9 cut(s)	53, 56, 73, 127, 139, 303, 389, 503, 1137
HpyAV	CCTTC	7 cut(s)	203, 233, 788, 1346, 1459, 1501, 1831
HpyCH4III	ACNGT	5 cut(s)	997, 1360, 1379, 1444, 1856
HpyCH4IV	ACGT	7 cut(s)	51, 378, 384, 456, 1869, 2121, 2233
HpyF10VI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
HpyF3I	CTNAG	9 cut(s)	406, 435, 607, 1005, 1064, 1488, 1611, 1994, 2024
HpySE526I	ACGT	7 cut(s)	51, 378, 384, 456, 1869, 2121, 2233
Hsp92I	GRCGYC	3 cut(s)	51, 295, 384
Hsp92II	CATG	4 cut(s)	1240, 1256, 1432, 1985
HspAI	GCGC	2 cut(s)	566, 847
Kpn2I	TCCGGA	1 cut(s)	1801
KspAI	GTTAAC	1 cut(s)	552
Kzo9I	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
LmnI	GCTCC	6 cut(s)	322, 559, 586, 628, 1985, 2133
Lsp1109I	GCAGC	5 cut(s)	850, 878, 1693, 1999, 2397
LweI	GCATC	4 cut(s)	661, 1195, 1501, 1693
MaeI	CTAG	2 cut(s)	927, 1017
MaeII	ACGT	7 cut(s)	51, 378, 384, 456, 1869, 2121, 2233
MaeIII	GTNAC	1 cut(s)	1277
MalI	GATC	8 cut(s)	231, 873, 1251, 1260, 1617, 2154, 2230, 2372
MbiI	CCGCTC	2 cut(s)	913, 973
MboI	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
MfeI	CAATTG	1 cut(s)	758
MflI	RGATCY	2 cut(s)	871, 1615
MhlI	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
MlsI	TGGCCA	1 cut(s)	347
MluI	ACGCGT	1 cut(s)	1135
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 581, 599, 1748
MmeI	TCCRAC	4 cut(s)	105, 1101, 1737, 2037
Mox20I	TGGCCA	1 cut(s)	347
Mph1103I	ATGCAT	1 cut(s)	1983
MroI	TCCGGA	1 cut(s)	1801
MroXI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
MscI	TGGCCA	1 cut(s)	347
MseI	TTAA	7 cut(s)	369, 551, 1035, 1089, 1461, 1713, 1766
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	4 cut(s)	269, 869, 2388, 2409
MspCI	CTTAAG	1 cut(s)	1460
MspR9I	CCNGG	8 cut(s)	261, 276, 556, 557, 599, 810, 1295, 1296
MunI	CAATTG	1 cut(s)	758
Mva1269I	GAATGC	1 cut(s)	1176
MvaI	CCWGG	2 cut(s)	599, 810
MvnI	CGCG	3 cut(s)	819, 849, 1137
MwoI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
NciI	CCSGG	6 cut(s)	261, 276, 556, 557, 1295, 1296
NcoI	CCATGG	1 cut(s)	1236
NdeII	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
NlaIII	CATG	4 cut(s)	1240, 1256, 1432, 1985
NlaIV	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
NmeAIII	GCCGAG	1 cut(s)	724
NmuCI	GTSAC	1 cut(s)	1277
NsiI	ATGCAT	1 cut(s)	1983
PagI	TCATGA	1 cut(s)	1252
PceI	AGGCCT	1 cut(s)	808
PcsI	WCGNNNNNNNCGW	4 cut(s)	57, 131, 165, 384
PctI	GAATGC	1 cut(s)	1176
PdmI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
PfeI	GAWTC	6 cut(s)	577, 897, 1013, 2174, 2269, 2396
PflFI	GACNNNGTC	2 cut(s)	53, 297
PkrI	GCNGC	8 cut(s)	359, 476, 751, 865, 868, 1708, 2014, 2387
PleI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 580, 599, 1747
PpsI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 580, 599, 1747
PsiI	TTATAA	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	327
Psp6I	CCWGG	2 cut(s)	597, 808
PspEI	GGTNACC	1 cut(s)	1277
PspFI	CCCAGC	2 cut(s)	265, 1943
PspGI	CCWGG	2 cut(s)	597, 808
PspN4I	GGNNCC	9 cut(s)	141, 264, 462, 509, 697, 1322, 1471, 1617, 1806
PspOMI	GGGCCC	1 cut(s)	262
PspPI	GGNCC	7 cut(s)	262, 263, 460, 696, 1320, 1333, 1673
PstI	CTGCAG	1 cut(s)	868
PsuI	RGATCY	2 cut(s)	871, 1615
PsyI	GACNNNGTC	2 cut(s)	53, 297
PvuII	CAGCTG	3 cut(s)	269, 2388, 2409
RsaI	GTAC	1 cut(s)	1376
RsaNI	GTAC	1 cut(s)	1375
SacI	GAGCTC	1 cut(s)	327
SalI	GTCGAC	2 cut(s)	422, 602
SaqAI	TTAA	7 cut(s)	369, 551, 1035, 1089, 1461, 1713, 1766
SatI	GCNGC	8 cut(s)	358, 475, 750, 864, 867, 1707, 2013, 2386
Sau3AI	GATC	8 cut(s)	229, 871, 1249, 1258, 1615, 2152, 2228, 2370
Sau96I	GGNCC	7 cut(s)	262, 263, 460, 696, 1320, 1333, 1673
SchI	GAGTC	8 cut(s)	59, 148, 170, 182, 419, 581, 599, 1748
ScrFI	CCNGG	8 cut(s)	261, 276, 556, 557, 599, 810, 1295, 1296
SduI	GDGCHC	6 cut(s)	201, 266, 327, 591, 633, 1826
SfaNI	GCATC	4 cut(s)	661, 1195, 1501, 1693
SfcI	CTRYAG	1 cut(s)	864
SgrAI	CRCCGGYG	1 cut(s)	658
SinI	GGWCC	2 cut(s)	460, 1320
SmaI	CCCGGG	2 cut(s)	557, 1296
SmlI	CTYRAG	3 cut(s)	94, 180, 1460
SmoI	CTYRAG	3 cut(s)	94, 180, 1460
SseBI	AGGCCT	1 cut(s)	808
SspMI	CTAG	2 cut(s)	927, 1017
SstI	GAGCTC	1 cut(s)	327
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	8 cut(s)	259, 274, 554, 555, 597, 808, 1293, 1294
StyI	CCWWGG	1 cut(s)	1236
TaaI	ACNGT	5 cut(s)	997, 1360, 1379, 1444, 1856
TaiI	ACGT	7 cut(s)	54, 381, 387, 459, 1872, 2124, 2236
TaqII	GACCGA	1 cut(s)	2148
TauI	GCSGC	3 cut(s)	360, 477, 752
TfiI	GAWTC	6 cut(s)	577, 897, 1013, 2174, 2269, 2396
Tru1I	TTAA	7 cut(s)	369, 551, 1035, 1089, 1461, 1713, 1766
Tru9I	TTAA	7 cut(s)	369, 551, 1035, 1089, 1461, 1713, 1766
TscAI	CASTG	3 cut(s)	414, 439, 1824
TseFI	GTSAC	1 cut(s)	1277
TseI	GCWGC	5 cut(s)	863, 866, 1706, 2012, 2385
Tsp45I	GTSAC	1 cut(s)	1277
TspDTI	ATGAA	4 cut(s)	938, 1365, 2097, 2294
TspGWI	ACGGA	4 cut(s)	26, 335, 1084, 2131
TspMI	CCCGGG	2 cut(s)	555, 1294
TspRI	CASTG	3 cut(s)	414, 439, 1824
Tth111I	GACNNNGTC	2 cut(s)	53, 297
Vha464I	CTTAAG	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1822
VpaK11BI	GGWCC	2 cut(s)	460, 1320
XagI	CCTNNNNNAGG	1 cut(s)	1328
XapI	RAATTY	4 cut(s)	1000, 1478, 2201, 2333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XmaI	CCCGGG	2 cut(s)	555, 1294
XmiI	GTMKAC	3 cut(s)	381, 423, 603
XmnI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
XspI	CTAG	2 cut(s)	927, 1017
ZraI	GACGTC	2 cut(s)	52, 385
Zsp2I	ATGCAT	1 cut(s)	1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.