Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Reverse (-)

62420835 .. 62423239

Gene Structure 2405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G038220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGAAGCAGCGGACCAACCCCAAAACCCTTCCGATAACCAAAACGACGTCGTCTCCGGCGATTCCTCGCCGGAAACTGACCTCACCCGCTCATCGAGCCCTCAGGAAAACAACCAAAACGATTCACAGAACCAGTCCTCGGAAAACCCGTCGGCACCACCGCAAGCGCCAATTTCGGACTCTCAAGATGACTCCTCCGAACCCATCCCTGAAGACACCCCTAATGAACCGCCTCAAAACCCCGCCGGAACGGGTCCAGCAGAGACCACCAGCCTTCCGGCGAAACGACGCCGTCGCAGGAAGAAGTTTTTCACGGAGCTGATCGGCACTCCGTCGATGGCCAAGAGCCGCCGGACCGACCTCAACAAAGAGGTCGACACCGAAGCCCTGATCGCACTCTCGGTGGGGTTTCCGGTAGACTCGCTCACCGAGGAGGAGATCGAGGCCAACGTGGTCCCCACCATCGGCGGAGTTGAGCAGGCCAACTATATCGTCGTCCGGAACCACATTCTGTCCAGGTGGCGGTCCAATGTTTCGTTCTGGTTGACCAGGGAGCTGGCTCTGGAGTCGATTCGGCTGGAGCATAAAGGATTGGTCGACAAAGCTTACAATTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTAGCTCCGGCGATTAAAGAAGTGAAATTGAGGTCGTTTGATGGGTCTGAGAGGGGCAATGTGGTAATTGTGGGAGCTGGTTTGGCCGGTTTGGTGGCGGCCAGGCAGTTGGTGTTTTTGGGGTTCAAAGTTGTGGTATTGGAAGGCAGGAGTAGGCCTGGAGGGAGAGTGAAGACGAAGAAAATGAAAGGGGAGGGATTGGAGGCTGCAGCTGATCTCGGTGGGAGTGTCCTCACCGGAATAAATGGGAACCCACTAGGGGTTTTGGCTCGGCAATTGGAGCTGCCTCTTCATAAGGTGAGGGATCTTTGCCCTCTTTATTTACCAGATGGAAAATCTGTGAATTCTGAAATTGATGATAGAATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGACATGCAATGATTGAGGAAGTTAAGTCTGTAGATGTTCCTTTAGGGACTGCACTGGAAGCTTTTCGAAGAAGAATGCTCTTGGATTGGCATCTTGCTAATTTGGAATATGCAAATGCCACCTTGATGTCTAATTTGTCAATGGCATATTGGGATCAGGATGATCCCTATGAGATGGGTGGTGACCATTGTTTTATTCCCGGAGGCAATGAGACCTTTGTGCGAGCCCTTGCAGAGGGCCTTCCAATTTTCTATGACAGGACTGTGGAAAGTATTAGGTATGGAACTGATGGGGTTTTGGTTTATGCAAATGGCCAGGAGTTTCGAGGGGACATGGTTCTTTGCACTGTGCCATTAGGTGTGCTTAAGAAGGGGTCAATTGAATTTGTCCCAGAGCTTCCACAAAGGAAGAGAGATGCAATTCAGAGTTTGGGATTTGGATTGTTGAATAAGGTTGCCATATTGTTTCCTTATAACTTTTGGGGTGGAGACATTGATACTTTTGGGCATTTGACTGAGGATCCGTGTATGAGAGGAGAGTTCTTTCTGTTTTATAGCTATTCTTCTGTGTCAGGAGGCCCTCTTCTAGTTGCGCTTGTTGCAGGAGATGCTGCCATTAAGTTTGAGCTGATGTCTCCCGTCGAATCTGTGAATAGGGTGTTGGAGATACTGAGGGGCATTTTCCACCCAAAAGGTATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGATGACTTTGCATACGGGTCATATTCATATGTTGCAGTAGGTTCTTCAGGAGATGATTACGATATTCTTGCAGAGAGCATTGGGGATGGGAGAGTATTCTTTGCTGGAGAGGCCACTAACAAGCAGTATCCGGCAACAATGCATGGAGCTTTGCTCAGTGGGATGAGAGAGGCTGCTAACATGTTGAGAGTAGCTAAAAGGAGGTCAATAATCCCCTCACAGAAATTTAATAATGCTTCCGAGGACAATGAGGATTTGGATAAATTATTTGACACCCCTGACTTGACATTTGGGAGCTTCTCCGTTTTGTTCGATCCCAGGTCATCGGATCCTGATTCTACATCCCTGTTTAGGGTTAAACTCGGAGGGGAAAAGTTGGACATGGGATGTTTCAGTTTGTATGGCTTAGTATTAAAGAAGCATGCCTTCAAGCTGAGAGATGTAGAAGGTGACGGGAACAGGATGACAATGTTGAATTTTGAATTTGGAGTGAGGCTGGTTGGGAGAAAAGGTCTGAGTGGTGTTGCGGAATCTCTGATCACCTGCATTAGATTAGCAAAATCACGTATGAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

791

Amino Acids

86.9

Weight (kDa)

5.32

Isoelectric Point (pI)

52.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	141 - 214	2e-14	SWIRM domain
NAD_binding_8	PF13450	238 - 297	1.4e-11	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	243 - 661	1.3e-84	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1527
AarI	CACCTGC	1 cut(s)	2348
AatII	GACGTC	1 cut(s)	51
Acc36I	ACCTGC	1 cut(s)	2348
AccB1I	GGYRCC	1 cut(s)	154
AccBSI	CCGCTC	1 cut(s)	90
AccI	GTMKAC	3 cut(s)	375, 417, 597
AccIII	TCCGGA	2 cut(s)	498, 1759
AclWI	GGATC	8 cut(s)	957, 1211, 1215, 1568, 1581, 2105, 2120, 2133
AcoI	YGGCCR	4 cut(s)	339, 729, 744, 1366
AcsI	RAATTY	5 cut(s)	988, 1436, 2021, 2272, 2279
AcuI	CTGAAG	2 cut(s)	231, 1827
AcyI	GRCGYC	2 cut(s)	48, 289
AdeI	CACNNNGTG	1 cut(s)	1788
AfiI	CCNNNNNNNGG	7 cut(s)	139, 464, 522, 904, 1288, 2148, 2149
AflII	CTTAAG	1 cut(s)	1418
AflIII	ACRYGT	1 cut(s)	1977
AgsI	TTSAA	6 cut(s)	772, 1436, 1501, 2227, 2272, 2279
AjnI	CCWGG	6 cut(s)	515, 548, 746, 802, 1368, 2114
AjuI	GAANNNNNNNTTGG	4 cut(s)	521, 553, 1697, 1729
Alw21I	GWGCWC	2 cut(s)	627, 1784
Alw26I	GTCTC	5 cut(s)	58, 257, 1259, 1536, 1692
Alw44I	GTGCAC	1 cut(s)	1780
AlwI	GGATC	8 cut(s)	957, 1211, 1215, 1568, 1581, 2105, 2120, 2133
Aor13HI	TCCGGA	2 cut(s)	498, 1759
ApaLI	GTGCAC	1 cut(s)	1780
ApeKI	GCWGC	6 cut(s)	8, 851, 854, 928, 1664, 1970
ApoI	RAATTY	5 cut(s)	988, 1436, 2021, 2272, 2279
ArsI	GACNNNNNNTTYG	2 cut(s)	2069, 2101
Asp700I	GAANNNNTTC	3 cut(s)	308, 1116, 1767
AspLEI	GCGC	2 cut(s)	169, 1648
AspS9I	GGNCC	7 cut(s)	13, 254, 354, 454, 525, 1291, 1631
AsuC2I	CCSGG	1 cut(s)	1254
AsuHPI	GGTGA	7 cut(s)	76, 418, 871, 955, 1247, 2258, 2329
AsuII	TTCGAA	1 cut(s)	1120
AsuNHI	GCTAGC	1 cut(s)	646
AvaII	GGWCC	5 cut(s)	13, 254, 354, 454, 525
AxyI	CCTNAGG	1 cut(s)	102
BaeGI	GKGCMC	1 cut(s)	1784
BalI	TGGCCA	2 cut(s)	341, 1368
BamHI	GGATCC	2 cut(s)	1573, 2125
BanI	GGYRCC	1 cut(s)	154
BanII	GRGCYC	2 cut(s)	101, 1282
BbsI	GAAGAC	2 cut(s)	219, 824
Bbv12I	GWGCWC	2 cut(s)	627, 1784
BbvI	GCAGC	6 cut(s)	20, 838, 866, 915, 1651, 1957
BccI	CCATC	8 cut(s)	212, 331, 470, 680, 968, 1222, 1337, 1877
BceAI	ACGGC	2 cut(s)	276, 643
BcgI	CGANNNNNNTGC	2 cut(s)	1847, 1881
BciT130I	CCWGG	6 cut(s)	517, 550, 748, 804, 1370, 2116
BciVI	GTATCC	1 cut(s)	1935
BclI	TGATCA	1 cut(s)	2334
BcnI	CCSGG	1 cut(s)	1254
BcoDI	GTCTC	5 cut(s)	58, 257, 1259, 1536, 1692
BfaI	CTAG	3 cut(s)	647, 902, 1640
BfmI	CTRYAG	2 cut(s)	852, 1083
BfoI	RGCGCY	1 cut(s)	170
BfrI	CTTAAG	1 cut(s)	1418
BfuAI	ACCTGC	1 cut(s)	2348
BfuI	GTATCC	1 cut(s)	1935
BisI	GCNGC	8 cut(s)	9, 349, 744, 852, 855, 929, 1665, 1971
BlsI	GCNGC	8 cut(s)	10, 350, 745, 853, 856, 930, 1666, 1972
Bme1390I	CCNGG	7 cut(s)	517, 550, 748, 804, 1254, 1370, 2116
Bme18I	GGWCC	5 cut(s)	13, 254, 354, 454, 525
BmgT120I	GGNCC	7 cut(s)	13, 254, 354, 454, 525, 1291, 1631
BmiI	GGNNCC	8 cut(s)	156, 255, 456, 503, 896, 1575, 1764, 2127
BmrFI	CCNGG	7 cut(s)	517, 550, 748, 804, 1254, 1370, 2116
BmsI	GCATC	3 cut(s)	1153, 1459, 1651
BmtI	GCTAGC	1 cut(s)	650
BpiI	GAAGAC	2 cut(s)	219, 824
BplI	GAGNNNNNCTC	2 cut(s)	1935, 1967
BpmI	CTGGAG	4 cut(s)	584, 599, 825, 1923
Bpu14I	TTCGAA	1 cut(s)	1120
BpuEI	CTTGAG	1 cut(s)	168
BpuMI	CCSGG	1 cut(s)	1254
BsaAI	YACGTR	1 cut(s)	2363
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaHI	GRCGYC	2 cut(s)	48, 289
BsaI	GGTCTC	2 cut(s)	257, 1259
BsaJI	CCNNGG	5 cut(s)	138, 429, 549, 2037, 2114
BsaWI	WCCGGW	4 cut(s)	412, 498, 881, 1759
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 798, 828, 2293, 2323
Bsc4I	CCNNNNNNNGG	7 cut(s)	139, 464, 522, 904, 1288, 2148, 2149
Bse118I	RCCGGY	1 cut(s)	731
Bse1I	ACTGG	2 cut(s)	133, 1113
Bse21I	CCTNAGG	1 cut(s)	102
Bse3DI	GCAATG	3 cut(s)	709, 1068, 1267
Bse8I	GATNNNNATC	1 cut(s)	1143
BseAI	TCCGGA	2 cut(s)	498, 1759
BseBI	CCWGG	6 cut(s)	517, 550, 748, 804, 1370, 2116
BseDI	CCNNGG	5 cut(s)	138, 429, 549, 2037, 2114
BseGI	GGATG	8 cut(s)	204, 1219, 1804, 1888, 1965, 2138, 2189, 2265
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	7 cut(s)	139, 464, 522, 904, 1288, 2148, 2149
BseMI	GCAATG	3 cut(s)	709, 1068, 1267
BseMII	CTCAG	7 cut(s)	116, 684, 1560, 1715, 1966, 2222, 2303
BseNI	ACTGG	2 cut(s)	133, 1113
BseRI	GAGGAG	4 cut(s)	184, 446, 449, 1602
BseSI	GKGCMC	1 cut(s)	1784
BseXI	GCAGC	6 cut(s)	20, 838, 866, 915, 1651, 1957
BsgI	GTGCAG	1 cut(s)	1089
BshNI	GGYRCC	1 cut(s)	154
BsiHKAI	GWGCWC	2 cut(s)	627, 1784
BslFI	GGGAC	4 cut(s)	440, 1114, 1397, 1427
BslI	CCNNNNNNNGG	7 cut(s)	139, 464, 522, 904, 1288, 2148, 2149
BsmAI	GTCTC	5 cut(s)	58, 257, 1259, 1536, 1692
BsmBI	CGTCTC	1 cut(s)	58
BsmFI	GGGAC	4 cut(s)	440, 1114, 1397, 1427
BsmI	GAATGC	1 cut(s)	1134
Bso31I	GGTCTC	2 cut(s)	257, 1259
Bsp119I	TTCGAA	1 cut(s)	1120
Bsp1286I	GDGCHC	4 cut(s)	101, 627, 1282, 1784
Bsp13I	TCCGGA	2 cut(s)	498, 1759
BspCNI	CTCAG	7 cut(s)	115, 685, 1561, 1716, 1965, 2223, 2304
BspEI	TCCGGA	2 cut(s)	498, 1759
BspLI	GGNNCC	8 cut(s)	156, 255, 456, 503, 896, 1575, 1764, 2127
BspMAI	CTGCAG	1 cut(s)	856
BspMI	ACCTGC	1 cut(s)	2348
BspOI	GCTAGC	1 cut(s)	650
BspPI	GGATC	8 cut(s)	957, 1211, 1215, 1568, 1581, 2105, 2120, 2133
BspT104I	TTCGAA	1 cut(s)	1120
BspT107I	GGYRCC	1 cut(s)	154
BspTI	CTTAAG	1 cut(s)	1418
BspTNI	GGTCTC	2 cut(s)	257, 1259
BsrBI	CCGCTC	1 cut(s)	90
BsrDI	GCAATG	3 cut(s)	709, 1068, 1267
BsrFI	RCCGGY	1 cut(s)	731
BsrI	ACTGG	2 cut(s)	133, 1113
BssAI	RCCGGY	1 cut(s)	731
BssECI	CCNNGG	5 cut(s)	138, 429, 549, 2037, 2114
BssNI	GRCGYC	2 cut(s)	48, 289
Bst2UI	CCWGG	6 cut(s)	517, 550, 748, 804, 1370, 2116
Bst4CI	ACNGT	3 cut(s)	1318, 1402, 2373
Bst6I	CTCTTC	3 cut(s)	939, 1457, 1641
BstACI	GRCGYC	2 cut(s)	48, 289
BstAFI	CTTAAG	1 cut(s)	1418
BstAPI	GCANNNNNTGC	1 cut(s)	1661
BstBAI	YACGTR	1 cut(s)	2363
BstBI	TTCGAA	1 cut(s)	1120
BstC8I	GCNNGC	6 cut(s)	165, 480, 558, 648, 1278, 2220
BstDEI	CTNAG	9 cut(s)	102, 693, 1052, 1569, 1724, 1952, 2203, 2231, 2312
BstEII	GGTNACC	1 cut(s)	1235
BstENI	CCTNNNNNAGG	1 cut(s)	1286
BstF5I	GGATG	8 cut(s)	204, 1219, 1804, 1888, 1965, 2138, 2189, 2265
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	2 cut(s)	169, 1648
BstMAI	GTCTC	5 cut(s)	58, 257, 1259, 1536, 1692
BstMWI	GCNNNNNNNGC	8 cut(s)	96, 392, 728, 925, 1112, 1652, 1661, 1907
BstNI	CCWGG	6 cut(s)	517, 550, 748, 804, 1370, 2116
BstNSI	RCATGY	3 cut(s)	1061, 1981, 2222
BstPI	GGTNACC	1 cut(s)	1235
BstSCI	CCNGG	7 cut(s)	515, 548, 746, 802, 1252, 1368, 2114
BstSFI	CTRYAG	2 cut(s)	852, 1083
BstSLI	GKGCMC	1 cut(s)	1784
BstV1I	GCAGC	6 cut(s)	20, 838, 866, 915, 1651, 1957
BstV2I	GAAGAC	2 cut(s)	219, 824
BstX2I	RGATCY	3 cut(s)	949, 1573, 2125
BstXI	CCANNNNNNTGG	2 cut(s)	556, 754
BstYI	RGATCY	3 cut(s)	949, 1573, 2125
Bsu36I	CCTNAGG	1 cut(s)	102
BsuI	GTATCC	1 cut(s)	1935
BtsCI	GGATG	8 cut(s)	204, 1219, 1804, 1888, 1965, 2138, 2189, 2265
BtsI	GCAGTG	1 cut(s)	1782
BtsIMutI	CAGTG	4 cut(s)	1106, 1398, 1782, 1960
BveI	ACCTGC	1 cut(s)	2348
Cac8I	GCNNGC	6 cut(s)	165, 480, 558, 648, 1278, 2220
CfoI	GCGC	2 cut(s)	169, 1648
Cfr10I	RCCGGY	1 cut(s)	731
Cfr13I	GGNCC	7 cut(s)	13, 254, 354, 454, 525, 1291, 1631
CpoI	CGGWCCG	1 cut(s)	354
CseI	GACGC	1 cut(s)	297
CspI	CGGWCCG	1 cut(s)	354
CviAII	CATG	6 cut(s)	1058, 1387, 1940, 1978, 2179, 2219
DdeI	CTNAG	9 cut(s)	102, 693, 1052, 1569, 1724, 1952, 2203, 2231, 2312
DraIII	CACNNNGTG	1 cut(s)	1788
EaeI	YGGCCR	4 cut(s)	339, 729, 744, 1366
Eam1104I	CTCTTC	3 cut(s)	939, 1457, 1641
EarI	CTCTTC	3 cut(s)	939, 1457, 1641
EciI	GGCGGA	1 cut(s)	483
Eco147I	AGGCCT	1 cut(s)	802
Eco24I	GRGCYC	2 cut(s)	101, 1282
Eco31I	GGTCTC	2 cut(s)	257, 1259
Eco47I	GGWCC	5 cut(s)	13, 254, 354, 454, 525
Eco57I	CTGAAG	2 cut(s)	231, 1827
Eco81I	CCTNAGG	1 cut(s)	102
Eco91I	GGTNACC	1 cut(s)	1235
EcoNI	CCTNNNNNAGG	1 cut(s)	1286
EcoO109I	RGGNCCY	2 cut(s)	1291, 1631
EcoO65I	GGTNACC	1 cut(s)	1235
EcoRI	GAATTC	1 cut(s)	988
EcoRII	CCWGG	6 cut(s)	515, 548, 746, 802, 1368, 2114
EcoT22I	ATGCAT	1 cut(s)	1941
EcoT38I	GRGCYC	2 cut(s)	101, 1282
Esp3I	CGTCTC	1 cut(s)	58
FaeI	CATG	6 cut(s)	1061, 1390, 1943, 1981, 2182, 2222
FalI	AAGNNNNNCTT	4 cut(s)	1787, 1819, 2207, 2239
FaqI	GGGAC	4 cut(s)	440, 1114, 1397, 1427
FatI	CATG	6 cut(s)	1057, 1386, 1939, 1977, 2178, 2218
FauI	CCCGC	2 cut(s)	95, 250
FauNDI	CATATG	1 cut(s)	1825
FbaI	TGATCA	1 cut(s)	2334
FblI	GTMKAC	3 cut(s)	375, 417, 597
Fnu4HI	GCNGC	8 cut(s)	9, 349, 744, 852, 855, 929, 1665, 1971
FokI	GGATG	8 cut(s)	191, 1226, 1811, 1895, 1972, 2125, 2196, 2272
FriOI	GRGCYC	2 cut(s)	101, 1282
Fsp4HI	GCNGC	8 cut(s)	9, 349, 744, 852, 855, 929, 1665, 1971
FspBI	CTAG	3 cut(s)	647, 902, 1640
GlaI	GCGC	2 cut(s)	168, 1647
GluI	GCNGC	8 cut(s)	9, 349, 744, 852, 855, 929, 1665, 1971
GsuI	CTGGAG	4 cut(s)	584, 599, 825, 1923
HaeII	RGCGCY	1 cut(s)	170
HgaI	GACGC	1 cut(s)	297
HhaI	GCGC	2 cut(s)	169, 1648
Hin1I	GRCGYC	2 cut(s)	48, 289
Hin1II	CATG	6 cut(s)	1061, 1390, 1943, 1981, 2182, 2222
Hin6I	GCGC	2 cut(s)	167, 1646
HinP1I	GCGC	2 cut(s)	167, 1646
HincII	GTYRAC	3 cut(s)	376, 546, 598
HindII	GTYRAC	3 cut(s)	376, 546, 598
HindIII	AAGCTT	3 cut(s)	603, 1049, 1113
HphI	GGTGA	7 cut(s)	76, 418, 871, 955, 1247, 2258, 2329
Hpy166II	GTNNAC	5 cut(s)	376, 418, 546, 598, 1782
Hpy188III	TCNNGA	9 cut(s)	104, 185, 499, 563, 1211, 1626, 1760, 1845, 2129
Hpy8I	GTNNAC	5 cut(s)	376, 418, 546, 598, 1782
Hpy99I	CGWCG	8 cut(s)	50, 53, 154, 291, 297, 337, 497, 1697
HpyAV	CCTTC	8 cut(s)	39, 284, 782, 1304, 1417, 1789, 2233, 2237
HpyCH4III	ACNGT	3 cut(s)	1318, 1402, 2373
HpyCH4IV	ACGT	3 cut(s)	48, 450, 2362
HpyF10VI	GCNNNNNNNGC	8 cut(s)	96, 392, 728, 925, 1112, 1652, 1661, 1907
HpyF3I	CTNAG	9 cut(s)	102, 693, 1052, 1569, 1724, 1952, 2203, 2231, 2312
HpySE526I	ACGT	3 cut(s)	48, 450, 2362
Hsp92I	GRCGYC	2 cut(s)	48, 289
Hsp92II	CATG	6 cut(s)	1061, 1390, 1943, 1981, 2182, 2222
HspAI	GCGC	2 cut(s)	167, 1646
Kpn2I	TCCGGA	2 cut(s)	498, 1759
Ksp22I	TGATCA	1 cut(s)	2334
LmnI	GCTCC	9 cut(s)	316, 553, 580, 622, 655, 719, 925, 1943, 2091
Lsp1109I	GCAGC	6 cut(s)	20, 838, 866, 915, 1651, 1957
LweI	GCATC	3 cut(s)	1153, 1459, 1651
MaeI	CTAG	3 cut(s)	647, 902, 1640
MaeII	ACGT	3 cut(s)	48, 450, 2362
MaeIII	GTNAC	2 cut(s)	1235, 2246
MbiI	CCGCTC	1 cut(s)	90
MfeI	CAATTG	2 cut(s)	920, 1431
MflI	RGATCY	3 cut(s)	949, 1573, 2125
MhlI	GDGCHC	4 cut(s)	101, 627, 1282, 1784
MlsI	TGGCCA	2 cut(s)	341, 1368
MluNI	TGGCCA	2 cut(s)	341, 1368
MlyI	GAGTC	4 cut(s)	173, 185, 413, 575
MmeI	TCCRAC	2 cut(s)	1695, 2154
Mox20I	TGGCCA	2 cut(s)	341, 1368
Mph1103I	ATGCAT	1 cut(s)	1941
MroI	TCCGGA	2 cut(s)	498, 1759
MroXI	GAANNNNTTC	3 cut(s)	308, 1116, 1767
MscI	TGGCCA	2 cut(s)	341, 1368
MseI	TTAA	8 cut(s)	660, 1023, 1077, 1419, 1671, 2025, 2154, 2210
MslI	CAYNNNNRTG	1 cut(s)	1178
Msp20I	TGGCCA	2 cut(s)	341, 1368
MspA1I	CMGCKG	2 cut(s)	11, 857
MspCI	CTTAAG	1 cut(s)	1418
MspR9I	CCNGG	7 cut(s)	517, 550, 748, 804, 1254, 1370, 2116
MunI	CAATTG	2 cut(s)	920, 1431
Mva1269I	GAATGC	1 cut(s)	1134
MvaI	CCWGG	6 cut(s)	517, 550, 748, 804, 1370, 2116
MwoI	GCNNNNNNNGC	8 cut(s)	96, 392, 728, 925, 1112, 1652, 1661, 1907
NciI	CCSGG	1 cut(s)	1254
NdeI	CATATG	1 cut(s)	1825
NheI	GCTAGC	1 cut(s)	646
NlaIII	CATG	6 cut(s)	1061, 1390, 1943, 1981, 2182, 2222
NlaIV	GGNNCC	8 cut(s)	156, 255, 456, 503, 896, 1575, 1764, 2127
NmeAIII	GCCGAG	1 cut(s)	895
NmuCI	GTSAC	2 cut(s)	1235, 2246
NsiI	ATGCAT	1 cut(s)	1941
NspI	RCATGY	3 cut(s)	1061, 1981, 2222
NspV	TTCGAA	1 cut(s)	1120
PaeI	GCATGC	1 cut(s)	2222
PaqCI	CACCTGC	1 cut(s)	2348
PceI	AGGCCT	1 cut(s)	802
PciI	ACATGT	1 cut(s)	1977
PcsI	WCGNNNNNNNCGW	3 cut(s)	57, 146, 447
PctI	GAATGC	1 cut(s)	1134
PdmI	GAANNNNTTC	3 cut(s)	308, 1116, 1767
PfeI	GAWTC	6 cut(s)	62, 122, 571, 1697, 2132, 2327
PflFI	GACNNNGTC	2 cut(s)	50, 291
PfoI	TCCNGGA	1 cut(s)	1252
PkrI	GCNGC	8 cut(s)	10, 350, 745, 853, 856, 930, 1666, 1972
PleI	GAGTC	4 cut(s)	173, 185, 413, 574
PpsI	GAGTC	4 cut(s)	173, 185, 413, 574
Ppu21I	YACGTR	1 cut(s)	2363
PscI	ACATGT	1 cut(s)	1977
PsiI	TTATAA	1 cut(s)	1527
Psp6I	CCWGG	6 cut(s)	515, 548, 746, 802, 1368, 2114
PspEI	GGTNACC	1 cut(s)	1235
PspGI	CCWGG	6 cut(s)	515, 548, 746, 802, 1368, 2114
PspN4I	GGNNCC	8 cut(s)	156, 255, 456, 503, 896, 1575, 1764, 2127
PspPI	GGNCC	7 cut(s)	13, 254, 354, 454, 525, 1291, 1631
PstI	CTGCAG	1 cut(s)	856
PsuI	RGATCY	3 cut(s)	949, 1573, 2125
PsyI	GACNNNGTC	2 cut(s)	50, 291
PvuII	CAGCTG	1 cut(s)	857
RseI	CAYNNNNRTG	1 cut(s)	1178
Rsr2I	CGGWCCG	1 cut(s)	354
RsrII	CGGWCCG	1 cut(s)	354
SalI	GTCGAC	2 cut(s)	374, 596
SaqAI	TTAA	8 cut(s)	660, 1023, 1077, 1419, 1671, 2025, 2154, 2210
SatI	GCNGC	8 cut(s)	9, 349, 744, 852, 855, 929, 1665, 1971
Sau96I	GGNCC	7 cut(s)	13, 254, 354, 454, 525, 1291, 1631
SchI	GAGTC	4 cut(s)	173, 185, 413, 575
ScrFI	CCNGG	7 cut(s)	517, 550, 748, 804, 1254, 1370, 2116
SduI	GDGCHC	4 cut(s)	101, 627, 1282, 1784
SfaNI	GCATC	3 cut(s)	1153, 1459, 1651
SfcI	CTRYAG	2 cut(s)	852, 1083
SfuI	TTCGAA	1 cut(s)	1120
SinI	GGWCC	5 cut(s)	13, 254, 354, 454, 525
SmiMI	CAYNNNNRTG	1 cut(s)	1178
SmlI	CTYRAG	2 cut(s)	183, 1418
SmoI	CTYRAG	2 cut(s)	183, 1418
SphI	GCATGC	1 cut(s)	2222
SseBI	AGGCCT	1 cut(s)	802
SspMI	CTAG	3 cut(s)	647, 902, 1640
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	7 cut(s)	515, 548, 746, 802, 1252, 1368, 2114
TaaI	ACNGT	3 cut(s)	1318, 1402, 2373
TaiI	ACGT	3 cut(s)	51, 453, 2365
TaqII	GACCGA	1 cut(s)	371
TauI	GCSGC	2 cut(s)	351, 746
TfiI	GAWTC	6 cut(s)	62, 122, 571, 1697, 2132, 2327
Tru1I	TTAA	8 cut(s)	660, 1023, 1077, 1419, 1671, 2025, 2154, 2210
Tru9I	TTAA	8 cut(s)	660, 1023, 1077, 1419, 1671, 2025, 2154, 2210
TscAI	CASTG	4 cut(s)	1113, 1405, 1782, 1960
TseFI	GTSAC	2 cut(s)	1235, 2246
TseI	GCWGC	6 cut(s)	8, 851, 854, 928, 1664, 1970
Tsp45I	GTSAC	2 cut(s)	1235, 2246
TspDTI	ATGAA	4 cut(s)	240, 845, 926, 1812
TspGWI	ACGGA	4 cut(s)	321, 329, 1566, 2089
TspRI	CASTG	4 cut(s)	1113, 1405, 1782, 1960
Tth111I	GACNNNGTC	2 cut(s)	50, 291
Vha464I	CTTAAG	1 cut(s)	1418
VneI	GTGCAC	1 cut(s)	1780
VpaK11BI	GGWCC	5 cut(s)	13, 254, 354, 454, 525
XagI	CCTNNNNNAGG	1 cut(s)	1286
XapI	RAATTY	5 cut(s)	988, 1436, 2021, 2272, 2279
XceI	RCATGY	3 cut(s)	1061, 1981, 2222
XmiI	GTMKAC	3 cut(s)	375, 417, 597
XmnI	GAANNNNTTC	3 cut(s)	308, 1116, 1767
XspI	CTAG	3 cut(s)	647, 902, 1640
ZraI	GACGTC	1 cut(s)	49
Zsp2I	ATGCAT	1 cut(s)	1941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.