Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

155206 .. 157653

Gene Structure 2448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g00270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGAAACAACGGACAAACCCCCAAACCCCTCCGAGAATCCCCCTAACGACGTCGTCTTCGACGACTCGTCGCCGGAAACCGACCTCACTCCCTCAAGCTCAACCCCTCACGAAAACCACTCGTCGGAAAACCCATCGGCACCTCCCCAAACGATCCTCGAAGCCCCCGTTTCGGACTCTCAAGATGACTCCTCCGAGCCCATTCCCGAAGGCGAAGACACCCTTCTCGAACAACAGCACCTCCAAAACCCTATCGAACCGGGCCCAGCTGAACCCGGTCTGCCAGCCAAGAGACGCCGTCGCAGGAAGAAGTTCTTCACGGAGCTCAATGGCTCTCCGTCGTTGGCCAAGAACCGCCGCACCGATCTCAACAAAGACGTCGACGTCGAAGCCCTAATCGCACTATCAGTGGGATTTCCGGTCGACTCGCTCACGGAGGAGGAAATCGATGCCAACGTGGTCCCCACCATCGGCGGCGTTGAGCAAGCCAACTATATCGTCGTGAGGAACCACATTCTGGCTCGGTGGAGGTCAAATGTGTCTTTCTGGTTGACCCGGGAGCTGGCGCTGGAGTCAATTCGCTCGGAGCACAAAGGCCTGGTAGACTCAGCTTACGAGTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTTGCACCGGCGGTGAAAGAAGCAAAATTGAGGTCCTTTGTCGAGGCCGAGAGGGGCAATGTGGTCATTGTGGGGGCTGGCTTGGCAGGTTTGGTGGCTGCCAGACAATTGGTGTTTTTGGGCTTCAAAGTTGCAGTCTTGGAAGGTAGGAGCAGACCTGGTGGTCGCGTGAAGACGAGGAAGATGGTAGGGGAGCGTGAGGGAGTGGAGGCTGCGGCGGATCTCGGCGGAAGTGTCCTCACTGGAATCAATGGCAACCCGCTCGGAGTTTTAGCTAGGCAACTGGGTTTGCCTCTTCACAAGGTGAGGGATATTTGCCCGCTTTATTTACCAGATGGGAAAGCTGTGAATTCTGAGATGGATTCTAGTATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGGCACGCAATGATAGAGGAAGTTAAGTCCGTAGATGTTTCGTTAGGGACTGCATTGGAAGCTTTTCGACGCGTTTATAGTGTTGCCCAAGACCCACAGGAGCGGATGCTCTTGGACTGGCATCTTGCTAATTTGGAATATGCAAATGCTTCCTTGATGTCCAATTTGTCCATGGCCTATTGGGATCAAGATGATCCCTATGAGATGGGAGGTGACCATTGTTTTATCCCGGGAGGCAATGATACTTTTGTGCGGTCCCTTGCAGAGGGCCTTCCAATCTTCTATGAAAGGACTGTGCAAAGTATTCGGTATGGTTCTGATGGGGTTTTGGTTTATGCAAACGGGCAGGAGTTTCGTGGGGACATGGTTCTTTGCACGGTCCCGTTAGGTGTGCTTAAGAAGGGTTCCATTGAATTTGTCCCTGAGCTTCCACAAAGGAAGAAGGATGCAATTCATAGTTTAGGATTTGGATTACTGAATAAGGTTGCCATATTGTTCCCTTATAACTTCTGGGGTGGAGATATTGATACTTTTGGGCACTTGACTGAGGAGCCGACTATGAGAGGCGAGTTCTTTCTGTTTTATAGCTACTCTTCTGTATCAGGAGGGCCTCTTCTAGTTGCTCTTGTGGCTGGAGATGCTGCGATTAAGTTTGAGTTGATGTCTCCTGTTGAGTCTGTGAATAGGGTGTTGGACATATTAAGGGGTATTTTCAACCCGAAAGGGATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGATGACTTTGCATACGGATCTTATTCATATGTTGCAGTAGGGTCTTCAGGAGATGATTATGATATTCTGGCAGAGAGTATTGGGGATGGGAGAGTGTTCTTTGCTGGAGAGGCCACTAACAAGCAATATCCGGCAACAATGCACGGAGCTTTTTTGAGTGGGATGAGAGAAGCGGCTAACATACTGAGAGTAGCCAAACTGCGGTCAATTATCCCATCAGAAAAATCAAGTAATGTTGGTGATGAAAAGGACGATTTGAATAATTTATTTGACACCCCTGACCTAAGATGTGGGAGCTTCTCTGTTTTGTATGATCCCCGGTCAAATGAGTTTGATTCTGCTAACTCGCTGTTGAGGGTGACATTTGGAGGGGGAAATATGGACATGGGATCATGTATCTCTCTTTGCCTATATGGTTTGATTTCGAGGAATCAGGCGAAGAAGTTGAGTGAGGTAGAAGGGGATGGGAACAGGATGAGAATGATAAATGTGGAATTTGGGGTGAGGTTGGTTGGGAGGAGAGGTCTAAGTGGTGCCGGGGAATCTTTAATCAGCTACATTAGGACAGCAAAATCAAAACCCAACGTAGATGGAGGAGTTAAAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

816

Amino Acids

88.98

Weight (kDa)

5.11

Isoelectric Point (pI)

51.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	142 - 216	3.3e-14	SWIRM domain
NAD_binding_8	PF13450	240 - 301	1.7e-10	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	245 - 675	2.3e-88	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
AasI	GACNNNNNNGTC	2 cut(s)	383, 813
AatII	GACGTC	3 cut(s)	54, 381, 387
Acc36I	ACCTGC	1 cut(s)	728
AccB1I	GGYRCC	2 cut(s)	139, 2372
AccB7I	CCANNNNNTGG	1 cut(s)	517
AccBSI	CCGCTC	2 cut(s)	913, 1168
AccI	GTMKAC	3 cut(s)	381, 423, 603
AccII	CGCG	2 cut(s)	819, 1137
AccIII	TCCGGA	1 cut(s)	1801
AclWI	GGATC	7 cut(s)	148, 879, 1253, 1257, 1864, 2147, 2236
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	3 cut(s)	1000, 1478, 2333
AcuI	CTGAAG	1 cut(s)	1869
AcyI	GRCGYC	4 cut(s)	51, 295, 378, 384
AdeI	CACNNNGTG	2 cut(s)	955, 1830
AfiI	CCNNNNNNNGG	7 cut(s)	124, 172, 470, 517, 562, 1330, 2040
AflII	CTTAAG	1 cut(s)	1460
AflIII	ACRYGT	1 cut(s)	1135
AgsI	TTSAA	4 cut(s)	778, 1478, 1780, 2098
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	2 cut(s)	597, 808
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	4 cut(s)	327, 591, 633, 1826
Alw26I	GTCTC	2 cut(s)	286, 1734
Alw44I	GTGCAC	1 cut(s)	1822
AlwI	GGATC	7 cut(s)	148, 879, 1253, 1257, 1864, 2147, 2236
Ama87I	CYCGRG	2 cut(s)	555, 1294
Aor13HI	TCCGGA	1 cut(s)	1801
AoxI	GGCC	8 cut(s)	262, 345, 595, 696, 1239, 1333, 1673, 1950
ApaI	GGGCCC	1 cut(s)	266
ApaLI	GTGCAC	1 cut(s)	1822
ApeKI	GCWGC	3 cut(s)	749, 863, 1706
ApoI	RAATTY	3 cut(s)	1000, 1478, 2333
ArsI	GACNNNNNNTTYG	6 cut(s)	41, 73, 668, 700, 771, 803
Asp700I	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
AspLEI	GCGC	1 cut(s)	568
AspS9I	GGNCC	8 cut(s)	262, 263, 460, 684, 1320, 1333, 1444, 1673
AsuC2I	CCSGG	8 cut(s)	261, 276, 556, 557, 1295, 1296, 2158, 2377
AsuHPI	GGTGA	6 cut(s)	676, 967, 1289, 2090, 2209, 2353
AvaI	CYCGRG	2 cut(s)	555, 1294
AvaII	GGWCC	4 cut(s)	460, 684, 1320, 1444
BaeGI	GKGCMC	3 cut(s)	266, 1605, 1826
BaeI	ACNNNNGTAYC	2 cut(s)	1299, 1332
BalI	TGGCCA	1 cut(s)	347
BanI	GGYRCC	2 cut(s)	139, 2372
BanII	GRGCYC	3 cut(s)	201, 266, 327
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
BbsI	GAAGAC	4 cut(s)	49, 222, 830, 1875
Bbv12I	GWGCWC	4 cut(s)	327, 591, 633, 1826
BbvI	GCAGC	3 cut(s)	736, 850, 1693
BceAI	ACGGC	2 cut(s)	282, 649
BcgI	CGANNNNNNTGC	6 cut(s)	895, 929, 1352, 1386, 1400, 1434
BciT130I	CCWGG	2 cut(s)	599, 810
BcnI	CCSGG	8 cut(s)	261, 276, 556, 557, 1295, 1296, 2158, 2377
BcoDI	GTCTC	2 cut(s)	286, 1734
BfaI	CTAG	3 cut(s)	927, 1017, 1682
BfoI	RGCGCY	1 cut(s)	569
BfrI	CTTAAG	1 cut(s)	1460
BfuAI	ACCTGC	1 cut(s)	728
BisI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
BlsI	GCNGC	7 cut(s)	359, 476, 751, 865, 868, 1708, 2014
Bme18I	GGWCC	4 cut(s)	460, 684, 1320, 1444
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	2 cut(s)	555, 1294
BmgT120I	GGNCC	8 cut(s)	262, 263, 460, 684, 1320, 1333, 1444, 1673
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	5 cut(s)	439, 1161, 1195, 1501, 1693
BmuI	ACTGGG	1 cut(s)	944
BpiI	GAAGAC	4 cut(s)	49, 222, 830, 1875
BpmI	CTGGAG	3 cut(s)	590, 1719, 1965
Bpu10I	CCTNAGC	2 cut(s)	1064, 1488
BpuEI	CTTGAG	2 cut(s)	79, 165
BpuMI	CCSGG	8 cut(s)	261, 276, 556, 557, 1295, 1296, 2158, 2377
Bsa29I	ATCGAT	1 cut(s)	447
BsaHI	GRCGYC	4 cut(s)	51, 295, 378, 384
BsaJI	CCNNGG	5 cut(s)	555, 1236, 1294, 2156, 2376
BsaWI	WCCGGW	2 cut(s)	418, 1801
BsaXI	ACNNNNNCTCC	5 cut(s)	225, 255, 2347, 2377, 2427
Bsc4I	CCNNNNNNNGG	7 cut(s)	124, 172, 470, 517, 562, 1330, 2040
Bse118I	RCCGGY	1 cut(s)	658
Bse1I	ACTGG	3 cut(s)	898, 939, 1187
Bse3DI	GCAATG	3 cut(s)	715, 1080, 1309
BseAI	TCCGGA	1 cut(s)	1801
BseBI	CCWGG	2 cut(s)	599, 810
BseCI	ATCGAT	1 cut(s)	447
BseDI	CCNNGG	5 cut(s)	555, 1236, 1294, 2156, 2376
BseGI	GGATG	7 cut(s)	1176, 1516, 1846, 1930, 2007, 2308, 2319
BseLI	CCNNNNNNNGG	7 cut(s)	124, 172, 470, 517, 562, 1330, 2040
BseMI	GCAATG	3 cut(s)	715, 1080, 1309
BseMII	CTCAG	5 cut(s)	621, 996, 1479, 1602, 2015
BseNI	ACTGG	3 cut(s)	898, 939, 1187
BseRI	GAGGAG	5 cut(s)	181, 452, 1628, 2371, 2448
BseSI	GKGCMC	3 cut(s)	266, 1605, 1826
BseXI	GCAGC	3 cut(s)	736, 850, 1693
BseYI	CCCAGC	1 cut(s)	265
Bsh1236I	CGCG	2 cut(s)	819, 1137
Bsh1285I	CGRYCG	1 cut(s)	423
BshFI	GGCC	8 cut(s)	264, 347, 597, 698, 1241, 1335, 1675, 1952
BshNI	GGYRCC	2 cut(s)	139, 2372
BshVI	ATCGAT	1 cut(s)	447
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	4 cut(s)	327, 591, 633, 1826
BsiHKCI	CYCGRG	2 cut(s)	555, 1294
BslFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BslI	CCNNNNNNNGG	7 cut(s)	124, 172, 470, 517, 562, 1330, 2040
BsmAI	GTCTC	2 cut(s)	286, 1734
BsmBI	CGTCTC	1 cut(s)	286
BsmFI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
BsnI	GGCC	8 cut(s)	264, 347, 597, 698, 1241, 1335, 1675, 1952
BsoBI	CYCGRG	2 cut(s)	555, 1294
Bsp120I	GGGCCC	1 cut(s)	262
Bsp1286I	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
Bsp13I	TCCGGA	1 cut(s)	1801
Bsp143I	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
Bsp19I	CCATGG	1 cut(s)	1236
BspANI	GGCC	8 cut(s)	264, 347, 597, 698, 1241, 1335, 1675, 1952
BspCNI	CTCAG	5 cut(s)	620, 997, 1480, 1603, 2016
BspDI	ATCGAT	1 cut(s)	447
BspEI	TCCGGA	1 cut(s)	1801
BspFNI	CGCG	2 cut(s)	819, 1137
BspMI	ACCTGC	1 cut(s)	728
BspPI	GGATC	7 cut(s)	148, 879, 1253, 1257, 1864, 2147, 2236
BspT107I	GGYRCC	2 cut(s)	139, 2372
BspTI	CTTAAG	1 cut(s)	1460
BsrBI	CCGCTC	2 cut(s)	913, 1168
BsrDI	GCAATG	3 cut(s)	715, 1080, 1309
BsrFI	RCCGGY	1 cut(s)	658
BsrI	ACTGG	3 cut(s)	898, 939, 1187
BssAI	RCCGGY	1 cut(s)	658
BssECI	CCNNGG	5 cut(s)	555, 1236, 1294, 2156, 2376
BssMI	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
BssNI	GRCGYC	4 cut(s)	51, 295, 378, 384
BssT1I	CCWWGG	1 cut(s)	1236
Bst2UI	CCWGG	2 cut(s)	599, 810
Bst4CI	ACNGT	2 cut(s)	1360, 1444
Bst6I	CTCTTC	3 cut(s)	951, 1663, 1683
BstACI	GRCGYC	4 cut(s)	51, 295, 378, 384
BstAFI	CTTAAG	1 cut(s)	1460
BstC8I	GCNNGC	7 cut(s)	285, 486, 564, 654, 730, 971, 1071
BstDEI	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
BstDSI	CCRYGG	1 cut(s)	1236
BstEII	GGTNACC	1 cut(s)	1277
BstENI	CCTNNNNNAGG	1 cut(s)	1328
BstF5I	GGATG	7 cut(s)	1176, 1516, 1846, 1930, 2007, 2308, 2319
BstFNI	CGCG	2 cut(s)	819, 1137
BstH2I	RGCGCY	1 cut(s)	569
BstHHI	GCGC	1 cut(s)	568
BstKTI	GATC	8 cut(s)	156, 367, 874, 1252, 1261, 1859, 2155, 2231
BstMAI	GTCTC	2 cut(s)	286, 1734
BstMBI	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
BstMCI	CGRYCG	1 cut(s)	423
BstMWI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
BstNI	CCWGG	2 cut(s)	599, 810
BstPI	GGTNACC	1 cut(s)	1277
BstSLI	GKGCMC	3 cut(s)	266, 1605, 1826
BstUI	CGCG	2 cut(s)	819, 1137
BstV1I	GCAGC	3 cut(s)	736, 850, 1693
BstV2I	GAAGAC	4 cut(s)	49, 222, 830, 1875
BstX2I	RGATCY	2 cut(s)	871, 1856
BstXI	CCANNNNNNTGG	1 cut(s)	760
BstYI	RGATCY	2 cut(s)	871, 1856
Bsu15I	ATCGAT	1 cut(s)	447
BsuRI	GGCC	8 cut(s)	264, 347, 597, 698, 1241, 1335, 1675, 1952
BsuTUI	ATCGAT	1 cut(s)	447
BtgI	CCRYGG	1 cut(s)	1236
BtsCI	GGATG	7 cut(s)	1176, 1516, 1846, 1930, 2007, 2308, 2319
BtsI	GCAGTG	1 cut(s)	1824
BtsIMutI	CAGTG	3 cut(s)	414, 891, 1824
BveI	ACCTGC	1 cut(s)	728
Cac8I	GCNNGC	7 cut(s)	285, 486, 564, 654, 730, 971, 1071
CfoI	GCGC	1 cut(s)	568
Cfr10I	RCCGGY	1 cut(s)	658
Cfr13I	GGNCC	8 cut(s)	262, 263, 460, 684, 1320, 1333, 1444, 1673
Cfr9I	CCCGGG	2 cut(s)	555, 1294
ClaI	ATCGAT	1 cut(s)	447
CseI	GACGC	2 cut(s)	303, 1143
CsiI	ACCWGGT	1 cut(s)	808
CviAII	CATG	4 cut(s)	1237, 1429, 2224, 2232
DdeI	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
DpnI	GATC	8 cut(s)	155, 366, 873, 1251, 1260, 1858, 2154, 2230
DpnII	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
DraIII	CACNNNGTG	2 cut(s)	955, 1830
DrdI	GACNNNNNNGTC	2 cut(s)	383, 813
DriI	GACNNNNNGTC	1 cut(s)	67
DseDI	GACNNNNNNGTC	2 cut(s)	383, 813
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	3 cut(s)	951, 1663, 1683
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	951, 1663, 1683
EciI	GGCGGA	2 cut(s)	884, 894
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	1 cut(s)	1236
Eco147I	AGGCCT	1 cut(s)	597
Eco24I	GRGCYC	3 cut(s)	201, 266, 327
Eco47I	GGWCC	4 cut(s)	460, 684, 1320, 1444
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	1869
Eco88I	CYCGRG	2 cut(s)	555, 1294
Eco91I	GGTNACC	1 cut(s)	1277
EcoICRI	GAGCTC	1 cut(s)	325
EcoNI	CCTNNNNNAGG	1 cut(s)	1328
EcoO109I	RGGNCCY	3 cut(s)	684, 1333, 1673
EcoO65I	GGTNACC	1 cut(s)	1277
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	2 cut(s)	597, 808
EcoT14I	CCWWGG	1 cut(s)	1236
EcoT38I	GRGCYC	3 cut(s)	201, 266, 327
ErhI	CCWWGG	1 cut(s)	1236
Esp3I	CGTCTC	1 cut(s)	286
FaeI	CATG	4 cut(s)	1240, 1432, 2227, 2235
FalI	AAGNNNNNCTT	6 cut(s)	207, 239, 299, 331, 1829, 1861
FaqI	GGGAC	6 cut(s)	446, 1126, 1306, 1430, 1439, 1469
FatI	CATG	4 cut(s)	1236, 1428, 2223, 2231
FauI	CCCGC	2 cut(s)	918, 978
FauNDI	CATATG	1 cut(s)	1867
FblI	GTMKAC	3 cut(s)	381, 423, 603
Fnu4HI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
FokI	GGATG	7 cut(s)	1183, 1523, 1853, 1937, 2014, 2315, 2326
FriOI	GRGCYC	3 cut(s)	201, 266, 327
Fsp4HI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
FspBI	CTAG	3 cut(s)	927, 1017, 1682
GlaI	GCGC	1 cut(s)	567
GluI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
GsaI	CCCAGC	1 cut(s)	269
GsuI	CTGGAG	3 cut(s)	590, 1719, 1965
HaeII	RGCGCY	1 cut(s)	569
HaeIII	GGCC	8 cut(s)	264, 347, 597, 698, 1241, 1335, 1675, 1952
HgaI	GACGC	2 cut(s)	303, 1143
HhaI	GCGC	1 cut(s)	568
Hin1I	GRCGYC	4 cut(s)	51, 295, 378, 384
Hin1II	CATG	4 cut(s)	1240, 1432, 2227, 2235
Hin6I	GCGC	1 cut(s)	566
HinP1I	GCGC	1 cut(s)	566
HincII	GTYRAC	3 cut(s)	382, 424, 552
HindII	GTYRAC	3 cut(s)	382, 424, 552
HindIII	AAGCTT	2 cut(s)	1061, 1125
HphI	GGTGA	6 cut(s)	676, 967, 1289, 2090, 2209, 2353
Hpy166II	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
Hpy188I	TCNGA	9 cut(s)	34, 127, 175, 196, 586, 917, 1006, 1384, 2059
Hpy188III	TCNNGA	9 cut(s)	110, 182, 206, 227, 502, 1253, 1668, 1802, 1887
Hpy8I	GTNNAC	5 cut(s)	382, 424, 552, 604, 1824
HpyAV	CCTTC	8 cut(s)	203, 233, 788, 1346, 1459, 1501, 1831, 2291
HpyCH4III	ACNGT	2 cut(s)	1360, 1444
HpyCH4IV	ACGT	5 cut(s)	51, 378, 384, 456, 2424
HpyF10VI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
HpyF3I	CTNAG	8 cut(s)	607, 1005, 1064, 1488, 1611, 2024, 2123, 2366
HpySE526I	ACGT	5 cut(s)	51, 378, 384, 456, 2424
Hsp92I	GRCGYC	4 cut(s)	51, 295, 378, 384
Hsp92II	CATG	4 cut(s)	1240, 1432, 2227, 2235
HspAI	GCGC	1 cut(s)	566
Kpn2I	TCCGGA	1 cut(s)	1801
Kzo9I	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
Lsp1109I	GCAGC	3 cut(s)	736, 850, 1693
LweI	GCATC	5 cut(s)	439, 1161, 1195, 1501, 1693
MabI	ACCWGGT	1 cut(s)	808
MaeI	CTAG	3 cut(s)	927, 1017, 1682
MaeII	ACGT	5 cut(s)	51, 378, 384, 456, 2424
MaeIII	GTNAC	2 cut(s)	1277, 2197
MalI	GATC	8 cut(s)	155, 366, 873, 1251, 1260, 1858, 2154, 2230
MbiI	CCGCTC	2 cut(s)	913, 1168
MboI	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
MfeI	CAATTG	1 cut(s)	758
MflI	RGATCY	2 cut(s)	871, 1856
MhlI	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
MlsI	TGGCCA	1 cut(s)	347
MluI	ACGCGT	1 cut(s)	1135
MluNI	TGGCCA	1 cut(s)	347
MlyI	GAGTC	7 cut(s)	59, 170, 182, 419, 581, 599, 1748
MmeI	TCCRAC	2 cut(s)	105, 1737
Mox20I	TGGCCA	1 cut(s)	347
MroI	TCCGGA	1 cut(s)	1801
MroXI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
MscI	TGGCCA	1 cut(s)	347
MseI	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
Msp20I	TGGCCA	1 cut(s)	347
MspA1I	CMGCKG	1 cut(s)	269
MspCI	CTTAAG	1 cut(s)	1460
MunI	CAATTG	1 cut(s)	758
MvaI	CCWGG	2 cut(s)	599, 810
MvnI	CGCG	2 cut(s)	819, 1137
MwoI	GCNNNNNNNGC	6 cut(s)	398, 734, 1124, 1694, 1703, 1949
NciI	CCSGG	8 cut(s)	261, 276, 556, 557, 1295, 1296, 2158, 2377
NcoI	CCATGG	1 cut(s)	1236
NdeI	CATATG	1 cut(s)	1867
NdeII	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
NlaIII	CATG	4 cut(s)	1240, 1432, 2227, 2235
NmeAIII	GCCGAG	2 cut(s)	724, 855
NmuCI	GTSAC	2 cut(s)	1277, 2197
PceI	AGGCCT	1 cut(s)	597
PcsI	WCGNNNNNNNCGW	5 cut(s)	57, 60, 165, 384, 453
PdmI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
PfeI	GAWTC	6 cut(s)	37, 897, 1013, 2174, 2269, 2381
PflFI	GACNNNGTC	2 cut(s)	53, 297
PflMI	CCANNNNNTGG	1 cut(s)	517
PkrI	GCNGC	7 cut(s)	359, 476, 751, 865, 868, 1708, 2014
PleI	GAGTC	7 cut(s)	59, 170, 182, 419, 580, 599, 1747
PpsI	GAGTC	7 cut(s)	59, 170, 182, 419, 580, 599, 1747
PpuMI	RGGWCCY	1 cut(s)	684
PsiI	TTATAA	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	327
Psp5II	RGGWCCY	1 cut(s)	684
Psp6I	CCWGG	2 cut(s)	597, 808
PspEI	GGTNACC	1 cut(s)	1277
PspFI	CCCAGC	1 cut(s)	265
PspGI	CCWGG	2 cut(s)	597, 808
PspOMI	GGGCCC	1 cut(s)	262
PspPI	GGNCC	8 cut(s)	262, 263, 460, 684, 1320, 1333, 1444, 1673
PspPPI	RGGWCCY	1 cut(s)	684
PsuI	RGATCY	2 cut(s)	871, 1856
PsyI	GACNNNGTC	2 cut(s)	53, 297
PvuII	CAGCTG	1 cut(s)	269
SacI	GAGCTC	1 cut(s)	327
SalI	GTCGAC	2 cut(s)	380, 422
SaqAI	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
SatI	GCNGC	7 cut(s)	358, 475, 750, 864, 867, 1707, 2013
Sau3AI	GATC	8 cut(s)	153, 364, 871, 1249, 1258, 1856, 2152, 2228
Sau96I	GGNCC	8 cut(s)	262, 263, 460, 684, 1320, 1333, 1444, 1673
SchI	GAGTC	7 cut(s)	59, 170, 182, 419, 581, 599, 1748
SduI	GDGCHC	7 cut(s)	201, 266, 327, 591, 633, 1605, 1826
SexAI	ACCWGGT	1 cut(s)	808
SfaNI	GCATC	5 cut(s)	439, 1161, 1195, 1501, 1693
SgrAI	CRCCGGYG	1 cut(s)	658
SgrDI	CGTCGACG	1 cut(s)	380
SinI	GGWCC	4 cut(s)	460, 684, 1320, 1444
SmaI	CCCGGG	2 cut(s)	557, 1296
SmlI	CTYRAG	3 cut(s)	94, 180, 1460
SmoI	CTYRAG	3 cut(s)	94, 180, 1460
SseBI	AGGCCT	1 cut(s)	597
SspMI	CTAG	3 cut(s)	927, 1017, 1682
SstI	GAGCTC	1 cut(s)	327
StuI	AGGCCT	1 cut(s)	597
StyI	CCWWGG	1 cut(s)	1236
TaaI	ACNGT	2 cut(s)	1360, 1444
TaiI	ACGT	5 cut(s)	54, 381, 387, 459, 2427
TauI	GCSGC	4 cut(s)	360, 477, 869, 2015
TfiI	GAWTC	6 cut(s)	37, 897, 1013, 2174, 2269, 2381
Tru1I	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
Tru9I	TTAA	7 cut(s)	1035, 1089, 1461, 1713, 1766, 2387, 2439
TscAI	CASTG	3 cut(s)	414, 898, 1824
TseFI	GTSAC	2 cut(s)	1277, 2197
TseI	GCWGC	3 cut(s)	749, 863, 1706
Tsp45I	GTSAC	2 cut(s)	1277, 2197
TspDTI	ATGAA	4 cut(s)	1365, 1508, 1854, 2097
TspGWI	ACGGA	7 cut(s)	26, 327, 335, 449, 1084, 1869, 1998
TspMI	CCCGGG	2 cut(s)	555, 1294
TspRI	CASTG	3 cut(s)	414, 898, 1824
Tth111I	GACNNNGTC	2 cut(s)	53, 297
Van91I	CCANNNNNTGG	1 cut(s)	517
Vha464I	CTTAAG	1 cut(s)	1460
VneI	GTGCAC	1 cut(s)	1822
VpaK11BI	GGWCC	4 cut(s)	460, 684, 1320, 1444
XagI	CCTNNNNNAGG	1 cut(s)	1328
XapI	RAATTY	3 cut(s)	1000, 1478, 2333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1234
XmaI	CCCGGG	2 cut(s)	555, 1294
XmiI	GTMKAC	3 cut(s)	381, 423, 603
XmnI	GAANNNNTTC	4 cut(s)	311, 314, 1128, 1809
XspI	CTAG	3 cut(s)	927, 1017, 1682
ZraI	GACGTC	3 cut(s)	52, 379, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.