Prupe.1G356300_v2.0.a1

Lysine-specific histone demethylase 1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
33028895 .. 33032192
3298 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G356300.1

Sequence Viewer

Length: 2442 bp
ATGGAAACAACGGACCCTTCCGATAATCTTCCTAACGACGTCGTCTTCGACGAGTCATCGCCGGAAACCGACCTAACACTCTCAGGCTCAACCCCTCCCGACAATCACCATTCCCAAAACCACTCGTCGGAAAACCCGTCCGCACCTCCCCGAACGACTCTTGATGCTCCGGTATCGGACTCTCAAGATGACTCGTCTGAGCCCATCCCCGAAGGCGAAGACTCCCTTCTTGATCAACAAGGCCTTCCAAACCCAGCCGAACCTGGTCCAGCCGAGCCCGGTCCGCCGGCCAAGAGACGTCGTCGCAGGAAGAAGTTCTTTACGGAGCTCAACAGCACTCCGTCGTTGGCTAAGAACCGCCGGACCGACCTCAACAAAGACGTTGACGTAGAAGCCCTAATCGCAATCTCAGTGGGATTTCCGGTCGACTCGCTCACGGAGGAGGAGATCGAGGCAAACGTGGTCCCTACCATTGGCGGCGTTGAGCAAGCCAACTATATCGTCGTGCGGAACCACATTTTGGCTCGGTGGAGGTCCAATGTCTCTTTCTGGTTGACCCGGGAGCTGGCGCTGGAGTCGATTCGCTTGGAGCACAAAGGCCTGGTCGACTCAGCTTACGACTTTCTGGTGGAGCACGGCTACATCAACTTTGGGCTTGCACCGGCGGTTAAAGAAGCCAAATTGAATTCCTTTGATGGGGTCGAGAGGGGCAATGTGGTCATTGTGGGGGCTGGTTTGGCCGGTTTGGTAGCGGCGAGGCAACTGGTGTTCTTGGGCTTCAAAGTTGTGGTCTTGGAAGGTAGGAACAGGCCTGGTGGGCGCGTGAAGACAAGGAAAATGAAAGGCGAGGGCGTGGAGGCTGCAGCGGATCTCGGTGGGAGTGTCCTCACCGGAATCAATGGAAACCCGTTAGGGGTTTTAGCTAGGCAACTGGGTTTGCCTCTTCATAAGGTGAGGGACATTTGCCCGCTCTATTTACCAGATGGGAAAGCAGTGAATTCTGAAATTGATTCTAGGATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTGTGTAAGCTAAGGCACGCAATGATCGAGGAAGTTAAGTCCGTAGATGTTTCCTTAGGGACTGCACTCGAAGCTTTTCGACGTGCTTATAGTGTTGCCCAAGACCCGCAGGAGCGTATGCTCTTGGATTGGCATCTGGCTAACTTGGAATATGCAAATGCTTCCTTAATGTCCAATTTGTCCATGGCCTATTGGGATCAGGATGATCCCTATGAGATGGGTGGTGACCATTGTTTTATTCCGGGAGGCAATGAGACCTTCGTGCGATCCCTTTCAGAGGGCCTTCCAATCTTCTATGAAAGGACTGTGCAAAGTATTAGGTACGGCTCTGATGGGGTTTTGGTTTACGCAAATGGTCAGGAGTTTCGCGGGGACATGGTTCTTTGCACGGTCCCATTAGGTGTGCTTAAGAAGGGTTCCATTGAATTTGTCCCAGAGCTTCCACAAAGGAAGAAAGATGCAATTCAGAGTTTAGGATTTGGATTATTGAATAAGGTTGCCATACTATTCCCTTATAATTTTTGGGGTGGAGATATTGATACTTTTGGGCATTTGACTGAGGATCCGAGTATGAGAGGTGAGTTCTTTCTGTTTTATAGCTACTCTTCTGTATCAGGAGGGCCTCTTCTGGTTGCTCTTGTTGCTGGAGATGCTGCCATTAAGTTTGAGTTGATGTCTCCTGTGGAGTCTGTGAATAGGGTGTTGGAGATATTAAGGGGTATTTTCAACCCGAAAGGGATTGCTGTTCCAGACCCTATTCAGGCAGTGTGCACTAGGTGGGGGAAGGATGCCTTTGCATATGGTTCTTATTCATATGTTGCGGTAGGGTCTTCAGGAGATGATTATGATATTCTTGCAGAGAGCATTGGGGATGGGAGAGTGTTCTTTGCTGGAGAGGCCACTAACAAGCAGTATCCAGCAACAATGCATGGAGCCTTACTCAGTGGAATGAGAGAGGCTGCTAATATACTGAGAGTGGCGAAAAGGAGGTCAATTATCCCATCAGAAAAATTAAACAATGTTTATGGGGGGGAAAGCGACGATTTGAATAAATTATTTGACACCCCTGACCTAACATTTGGGAGCTTCTCTGTTTTGTTTGATCCCAGGTCAAATGAGGTTGATTCTAGTAACTCACTGTTGAGGGTGAAATTTGGAGGGAAATATTTGGACGTGGGATGTCTCAGTCTCTGTCTGTATGGCTTAATTTCAAGGAATCAAGCCATTAAGCTGAGTGAGGAAGAAGGTGAAGAGAACAGGATGAGAATGTTAAATCAGAAATTTGGGGTGAGGTTGGTTGGGAGGAAAGGTTTAAATGGTGCCGGGGAATCTCTAATCACCAACATTAGATCAGCAAAATCCAACCTAGAAGATGGAGGAATTCAAAGATGA

Protein Analysis

814

Amino Acids

88.83

Weight (kDa)

5.14

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62830
fragaria_vesca FvH4_2g37680
malus_domestica MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica Prupe.1G356300_v2.0.a1
pyrus_communis pycom08g00320 pycom15g00270
rosa_chinensis RchiOBHm_Chr6g0304051
rosa_laevigata RLG00000011022
rosa_multiflora Rmu_sc0003805.1_g000012
rosa_roxburghii Rroxscaffold_7G00164150
rosa_rugosa Rorug06G0327300
rosa_samantha Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana Rw6G038220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1566
AatII GACGTC 2 cut(s) 42, 301
AccB1I GGYRCC 1 cut(s) 2369
AccB7I CCANNNNNTGG 1 cut(s) 520
AccBSI CCGCTC 1 cut(s) 970
AccI GTMKAC 2 cut(s) 426, 606
AccII CGCG 2 cut(s) 822, 1419
AclWI GGATC 7 cut(s) 876, 1250, 1254, 1311, 1607, 1620, 2147
AcoI YGGCCR 2 cut(s) 288, 738
AcsI RAATTY 6 cut(s) 685, 997, 1475, 2201, 2330, 2430
AcuI CTGAAG 1 cut(s) 1866
AcyI GRCGYC 2 cut(s) 39, 298
AdeI CACNNNGTG 1 cut(s) 1827
AfaI GTAC 1 cut(s) 1373
AfiI CCNNNNNNNGG 8 cut(s) 127, 473, 520, 565, 696, 913, 1327, 1810
AflII CTTAAG 1 cut(s) 1457
AgsI TTSAA 8 cut(s) 685, 781, 1475, 1540, 1777, 2098, 2262, 2435
AjiI CACGTC 2 cut(s) 1133, 2224
AjnI CCWGG 4 cut(s) 262, 600, 811, 2156
AjuI GAANNNNNNNTTGG 6 cut(s) 503, 530, 535, 562, 1736, 1768
Alw21I GWGCWC 4 cut(s) 330, 594, 636, 1823
Alw26I GTCTC 6 cut(s) 289, 547, 1298, 1731, 2237, 2243
Alw44I GTGCAC 1 cut(s) 1819
AlwI GGATC 7 cut(s) 876, 1250, 1254, 1311, 1607, 1620, 2147
AlwNI CAGNNNCTG 1 cut(s) 2241
Ama87I CYCGRG 1 cut(s) 558
AoxI GGCC 9 cut(s) 241, 288, 598, 738, 809, 1236, 1330, 1670, 1947
ApaLI GTGCAC 1 cut(s) 1819
ApeKI GCWGC 4 cut(s) 860, 863, 1703, 2009
ApoI RAATTY 6 cut(s) 685, 997, 1475, 2201, 2330, 2430
Asp700I GAANNNNTTC 2 cut(s) 314, 1125
AspLEI GCGC 2 cut(s) 571, 822
AspS9I GGNCC 9 cut(s) 13, 266, 281, 363, 463, 534, 1330, 1441, 1670
AsuC2I CCSGG 5 cut(s) 279, 559, 560, 1293, 2374
AsuHPI GGTGA 9 cut(s) 98, 880, 964, 1286, 1640, 2209, 2309, 2350, 2380
AvaI CYCGRG 1 cut(s) 558
AvaII GGWCC 7 cut(s) 13, 266, 281, 363, 463, 534, 1441
AxyI CCTNAGG 1 cut(s) 1105
BaeGI GKGCMC 1 cut(s) 1823
BamHI GGATCC 1 cut(s) 1612
BanI GGYRCC 1 cut(s) 2369
BanII GRGCYC 3 cut(s) 204, 279, 330
BbsI GAAGAC 4 cut(s) 37, 225, 833, 1872
Bbv12I GWGCWC 4 cut(s) 330, 594, 636, 1823
BbvI GCAGC 4 cut(s) 847, 875, 1690, 1996
BccI CCATC 8 cut(s) 212, 689, 977, 1261, 1376, 1916, 2059, 2417
BceAI ACGGC 2 cut(s) 652, 1390
BciT130I CCWGG 4 cut(s) 264, 602, 813, 2158
BciVI GTATCC 1 cut(s) 1974
BclI TGATCA 1 cut(s) 232
BcnI CCSGG 5 cut(s) 279, 559, 560, 1293, 2374
BcoDI GTCTC 6 cut(s) 289, 547, 1298, 1731, 2237, 2243
BfaI CTAG 5 cut(s) 924, 1014, 1824, 2178, 2417
BfmI CTRYAG 1 cut(s) 861
BfoI RGCGCY 1 cut(s) 572
BfrI CTTAAG 1 cut(s) 1457
BfuI GTATCC 1 cut(s) 1974
BglI GCCNNNNNGGC 1 cut(s) 817
BisI GCNGC 6 cut(s) 478, 753, 861, 864, 1704, 2010
BlsI GCNGC 6 cut(s) 479, 754, 862, 865, 1705, 2011
Bme1390I CCNGG 9 cut(s) 264, 279, 559, 560, 602, 813, 1293, 2158, 2374
Bme18I GGWCC 7 cut(s) 13, 266, 281, 363, 463, 534, 1441
BmeT110I CYCGRG 1 cut(s) 558
BmgBI CACGTC 2 cut(s) 1133, 2224
BmgT120I GGNCC 9 cut(s) 13, 266, 281, 363, 463, 534, 1330, 1441, 1670
BmiI GGNNCC 8 cut(s) 15, 465, 512, 1443, 1468, 1614, 1984, 2371
BmrFI CCNGG 9 cut(s) 264, 279, 559, 560, 602, 813, 1293, 2158, 2374
BmrI ACTGGG 1 cut(s) 941
BmsI GCATC 5 cut(s) 154, 1192, 1498, 1690, 1828
BmuI ACTGGG 1 cut(s) 941
BpiI GAAGAC 4 cut(s) 37, 225, 833, 1872
BplI GAGNNNNNCTC 2 cut(s) 1974, 2006
BpmI CTGGAG 3 cut(s) 593, 1716, 1962
Bpu10I CCTNAGC 1 cut(s) 1061
BpuEI CTTGAG 1 cut(s) 168
BpuMI CCSGG 5 cut(s) 279, 559, 560, 1293, 2374
BsaBI GATNNNNATC 1 cut(s) 1182
BsaHI GRCGYC 2 cut(s) 39, 298
BsaI GGTCTC 1 cut(s) 1298
BsaJI CCNNGG 4 cut(s) 558, 1233, 2156, 2373
BsaWI WCCGGW 3 cut(s) 169, 421, 890
BsaXI ACNNNNNCTCC 2 cut(s) 2344, 2374
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 473, 520, 565, 696, 913, 1327, 1810
Bse118I RCCGGY 3 cut(s) 286, 661, 740
Bse1I ACTGG 2 cut(s) 768, 936
Bse21I CCTNAGG 1 cut(s) 1105
Bse3DI GCAATG 3 cut(s) 718, 1077, 1306
Bse8I GATNNNNATC 1 cut(s) 1182
BseBI CCWGG 4 cut(s) 264, 602, 813, 2158
BseDI CCNNGG 4 cut(s) 558, 1233, 2156, 2373
BseGI GGATG 6 cut(s) 204, 1258, 1843, 1927, 2234, 2316
BseJI GATNNNNATC 1 cut(s) 1182
BseLI CCNNNNNNNGG 8 cut(s) 127, 473, 520, 565, 696, 913, 1327, 1810
BseMI GCAATG 3 cut(s) 718, 1077, 1306
BseMII CTCAG 9 cut(s) 96, 189, 423, 624, 1599, 2005, 2012, 2248, 2273
BseNI ACTGG 2 cut(s) 768, 936
BseRI GAGGAG 2 cut(s) 455, 458
BseSI GKGCMC 1 cut(s) 1823
BseXI GCAGC 4 cut(s) 847, 875, 1690, 1996
BseYI CCCAGC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 1098
Bsh1236I CGCG 2 cut(s) 822, 1419
Bsh1285I CGRYCG 1 cut(s) 426
BshFI GGCC 9 cut(s) 243, 290, 600, 740, 811, 1238, 1332, 1672, 1949
BshNI GGYRCC 1 cut(s) 2369
BsiEI CGRYCG 1 cut(s) 426
BsiHKAI GWGCWC 4 cut(s) 330, 594, 636, 1823
BsiHKCI CYCGRG 1 cut(s) 558
BslFI GGGAC 6 cut(s) 449, 971, 1123, 1427, 1436, 1466
BslI CCNNNNNNNGG 8 cut(s) 127, 473, 520, 565, 696, 913, 1327, 1810
BsmAI GTCTC 6 cut(s) 289, 547, 1298, 1731, 2237, 2243
BsmBI CGTCTC 1 cut(s) 289
BsmFI GGGAC 6 cut(s) 449, 971, 1123, 1427, 1436, 1466
BsnI GGCC 9 cut(s) 243, 290, 600, 740, 811, 1238, 1332, 1672, 1949
Bso31I GGTCTC 1 cut(s) 1298
BsoBI CYCGRG 1 cut(s) 558
Bsp1286I GDGCHC 6 cut(s) 204, 279, 330, 594, 636, 1823
Bsp19I CCATGG 1 cut(s) 1233
BspANI GGCC 9 cut(s) 243, 290, 600, 740, 811, 1238, 1332, 1672, 1949
BspCNI CTCAG 9 cut(s) 95, 190, 422, 623, 1600, 2004, 2013, 2247, 2274
BspFNI CGCG 2 cut(s) 822, 1419
BspLI GGNNCC 8 cut(s) 15, 465, 512, 1443, 1468, 1614, 1984, 2371
BspMAI CTGCAG 1 cut(s) 865
BspPI GGATC 7 cut(s) 876, 1250, 1254, 1311, 1607, 1620, 2147
BspT107I GGYRCC 1 cut(s) 2369
BspTI CTTAAG 1 cut(s) 1457
BspTNI GGTCTC 1 cut(s) 1298
BsrBI CCGCTC 1 cut(s) 970
BsrDI GCAATG 3 cut(s) 718, 1077, 1306
BsrFI RCCGGY 3 cut(s) 286, 661, 740
BsrI ACTGG 2 cut(s) 768, 936
BssAI RCCGGY 3 cut(s) 286, 661, 740
BssECI CCNNGG 4 cut(s) 558, 1233, 2156, 2373
BssNI GRCGYC 2 cut(s) 39, 298
BssT1I CCWWGG 1 cut(s) 1233
Bst2UI CCWGG 4 cut(s) 264, 602, 813, 2158
Bst4CI ACNGT 3 cut(s) 1357, 1441, 2190
Bst6I CTCTTC 4 cut(s) 948, 1660, 1680, 2295
BstACI GRCGYC 2 cut(s) 39, 298
BstAFI CTTAAG 1 cut(s) 1457
BstC8I GCNNGC 6 cut(s) 288, 489, 567, 657, 968, 1068
BstDSI CCRYGG 1 cut(s) 1233
BstEII GGTNACC 1 cut(s) 1274
BstENI CCTNNNNNAGG 1 cut(s) 1325
BstF5I GGATG 6 cut(s) 204, 1258, 1843, 1927, 2234, 2316
BstFNI CGCG 2 cut(s) 822, 1419
BstH2I RGCGCY 1 cut(s) 572
BstHHI GCGC 2 cut(s) 571, 822
BstMAI GTCTC 6 cut(s) 289, 547, 1298, 1731, 2237, 2243
BstMCI CGRYCG 1 cut(s) 426
BstMWI GCNNNNNNNGC 8 cut(s) 283, 401, 737, 817, 1121, 1691, 1700, 1946
BstNI CCWGG 4 cut(s) 264, 602, 813, 2158
BstPI GGTNACC 1 cut(s) 1274
BstSCI CCNGG 9 cut(s) 262, 277, 557, 558, 600, 811, 1291, 2156, 2372
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 1823
BstUI CGCG 2 cut(s) 822, 1419
BstV1I GCAGC 4 cut(s) 847, 875, 1690, 1996
BstV2I GAAGAC 4 cut(s) 37, 225, 833, 1872
BstX2I RGATCY 2 cut(s) 868, 1612
BstYI RGATCY 2 cut(s) 868, 1612
Bsu36I CCTNAGG 1 cut(s) 1105
BsuI GTATCC 1 cut(s) 1974
BsuRI GGCC 9 cut(s) 243, 290, 600, 740, 811, 1238, 1332, 1672, 1949
BtgI CCRYGG 1 cut(s) 1233
BtgZI GCGATG 1 cut(s) 42
BtrI CACGTC 2 cut(s) 1133, 2224
BtsCI GGATG 6 cut(s) 204, 1258, 1843, 1927, 2234, 2316
BtsI GCAGTG 2 cut(s) 999, 1821
BtsIMutI CAGTG 5 cut(s) 417, 999, 1821, 1999, 2186
Cac8I GCNNGC 6 cut(s) 288, 489, 567, 657, 968, 1068
CaiI CAGNNNCTG 1 cut(s) 2241
CfoI GCGC 2 cut(s) 571, 822
Cfr10I RCCGGY 3 cut(s) 286, 661, 740
Cfr13I GGNCC 9 cut(s) 13, 266, 281, 363, 463, 534, 1330, 1441, 1670
Cfr9I CCCGGG 1 cut(s) 558
CpoI CGGWCCG 2 cut(s) 281, 363
CsiI ACCWGGT 1 cut(s) 262
Csp6I GTAC 1 cut(s) 1372
CspCI CAANNNNNGTGG 2 cut(s) 393, 428
CspI CGGWCCG 2 cut(s) 281, 363
CviAII CATG 3 cut(s) 1234, 1426, 1979
CviQI GTAC 1 cut(s) 1372
DraI TTTAAA 1 cut(s) 2364
DraIII CACNNNGTG 1 cut(s) 1827
EaeI YGGCCR 2 cut(s) 288, 738
Eam1104I CTCTTC 4 cut(s) 948, 1660, 1680, 2295
EarI CTCTTC 4 cut(s) 948, 1660, 1680, 2295
EciI GGCGGA 1 cut(s) 273
Ecl136II GAGCTC 1 cut(s) 328
Eco130I CCWWGG 1 cut(s) 1233
Eco147I AGGCCT 3 cut(s) 243, 600, 811
Eco24I GRGCYC 3 cut(s) 204, 279, 330
Eco31I GGTCTC 1 cut(s) 1298
Eco47I GGWCC 7 cut(s) 13, 266, 281, 363, 463, 534, 1441
Eco53kI GAGCTC 1 cut(s) 328
Eco57I CTGAAG 1 cut(s) 1866
Eco81I CCTNAGG 1 cut(s) 1105
Eco88I CYCGRG 1 cut(s) 558
Eco91I GGTNACC 1 cut(s) 1274
EcoICRI GAGCTC 1 cut(s) 328
EcoNI CCTNNNNNAGG 1 cut(s) 1325
EcoO109I RGGNCCY 2 cut(s) 1330, 1670
EcoO65I GGTNACC 1 cut(s) 1274
EcoRI GAATTC 3 cut(s) 685, 997, 2430
EcoRII CCWGG 4 cut(s) 262, 600, 811, 2156
EcoT14I CCWWGG 1 cut(s) 1233
EcoT22I ATGCAT 1 cut(s) 1980
EcoT38I GRGCYC 3 cut(s) 204, 279, 330
ErhI CCWWGG 1 cut(s) 1233
Esp3I CGTCTC 1 cut(s) 289
FaeI CATG 3 cut(s) 1237, 1429, 1982
FalI AAGNNNNNCTT 6 cut(s) 210, 242, 302, 334, 1826, 1858
FaqI GGGAC 6 cut(s) 449, 971, 1123, 1427, 1436, 1466
FatI CATG 3 cut(s) 1233, 1425, 1978
FauI CCCGC 3 cut(s) 975, 1164, 1412
FauNDI CATATG 2 cut(s) 1849, 1864
FbaI TGATCA 1 cut(s) 232
FblI GTMKAC 2 cut(s) 426, 606
Fnu4HI GCNGC 6 cut(s) 478, 753, 861, 864, 1704, 2010
FokI GGATG 6 cut(s) 191, 1265, 1850, 1934, 2241, 2323
FriOI GRGCYC 3 cut(s) 204, 279, 330
Fsp4HI GCNGC 6 cut(s) 478, 753, 861, 864, 1704, 2010
FspBI CTAG 5 cut(s) 924, 1014, 1824, 2178, 2417
GlaI GCGC 2 cut(s) 570, 821
GluI GCNGC 6 cut(s) 478, 753, 861, 864, 1704, 2010
GsaI CCCAGC 1 cut(s) 257
GsuI CTGGAG 3 cut(s) 593, 1716, 1962
HaeII RGCGCY 1 cut(s) 572
HaeIII GGCC 9 cut(s) 243, 290, 600, 740, 811, 1238, 1332, 1672, 1949
HhaI GCGC 2 cut(s) 571, 822
Hin1I GRCGYC 2 cut(s) 39, 298
Hin1II CATG 3 cut(s) 1237, 1429, 1982
Hin6I GCGC 2 cut(s) 569, 820
HinP1I GCGC 2 cut(s) 569, 820
HincII GTYRAC 4 cut(s) 385, 427, 555, 607
HindII GTYRAC 4 cut(s) 385, 427, 555, 607
HindIII AAGCTT 1 cut(s) 1122
HphI GGTGA 9 cut(s) 98, 880, 964, 1286, 1640, 2209, 2309, 2350, 2380
Hpy166II GTNNAC 6 cut(s) 385, 427, 555, 607, 1396, 1821
Hpy8I GTNNAC 6 cut(s) 385, 427, 555, 607, 1396, 1821
HpyCH4III ACNGT 3 cut(s) 1357, 1441, 2190
HpyCH4IV ACGT 7 cut(s) 39, 298, 381, 387, 459, 1132, 2223
HpyF10VI GCNNNNNNNGC 8 cut(s) 283, 401, 737, 817, 1121, 1691, 1700, 1946
HpySE526I ACGT 7 cut(s) 39, 298, 381, 387, 459, 1132, 2223
Hsp92I GRCGYC 2 cut(s) 39, 298
Hsp92II CATG 3 cut(s) 1237, 1429, 1982
HspAI GCGC 2 cut(s) 569, 820
KroI GCCGGC 1 cut(s) 286
KroNI GCCGGC 1 cut(s) 288
Ksp22I TGATCA 1 cut(s) 232
LmnI GCTCC 8 cut(s) 172, 325, 562, 589, 631, 1162, 1982, 2133
Lsp1109I GCAGC 4 cut(s) 847, 875, 1690, 1996
LweI GCATC 5 cut(s) 154, 1192, 1498, 1690, 1828
MabI ACCWGGT 1 cut(s) 262
MaeI CTAG 5 cut(s) 924, 1014, 1824, 2178, 2417
MaeII ACGT 7 cut(s) 39, 298, 381, 387, 459, 1132, 2223
MaeIII GTNAC 2 cut(s) 1274, 2180
MbiI CCGCTC 1 cut(s) 970
MflI RGATCY 2 cut(s) 868, 1612
MhlI GDGCHC 6 cut(s) 204, 279, 330, 594, 636, 1823
MlyI GAGTC 9 cut(s) 62, 151, 173, 185, 215, 422, 584, 602, 1745
MmeI TCCRAC 3 cut(s) 108, 1734, 2436
Mph1103I ATGCAT 1 cut(s) 1980
MroNI GCCGGC 1 cut(s) 286
MroXI GAANNNNTTC 2 cut(s) 314, 1125
MspA1I CMGCKG 1 cut(s) 866
MspCI CTTAAG 1 cut(s) 1457
MspR9I CCNGG 9 cut(s) 264, 279, 559, 560, 602, 813, 1293, 2158, 2374
MvaI CCWGG 4 cut(s) 264, 602, 813, 2158
MvnI CGCG 2 cut(s) 822, 1419
MwoI GCNNNNNNNGC 8 cut(s) 283, 401, 737, 817, 1121, 1691, 1700, 1946
NaeI GCCGGC 1 cut(s) 288
NciI CCSGG 5 cut(s) 279, 559, 560, 1293, 2374
NcoI CCATGG 1 cut(s) 1233
NdeI CATATG 2 cut(s) 1849, 1864
NgoMIV GCCGGC 1 cut(s) 286
NlaIII CATG 3 cut(s) 1237, 1429, 1982
NlaIV GGNNCC 8 cut(s) 15, 465, 512, 1443, 1468, 1614, 1984, 2371
NmeAIII GCCGAG 1 cut(s) 298
NmuCI GTSAC 1 cut(s) 1274
NsiI ATGCAT 1 cut(s) 1980
PceI AGGCCT 3 cut(s) 243, 600, 811
PcsI WCGNNNNNNNCGW 5 cut(s) 45, 48, 134, 456, 1074
PdiI GCCGGC 1 cut(s) 288
PdmI GAANNNNTTC 2 cut(s) 314, 1125
PfeI GAWTC 6 cut(s) 580, 894, 1010, 2174, 2266, 2378
PflFI GACNNNGTC 2 cut(s) 41, 300
PflMI CCANNNNNTGG 1 cut(s) 520
PfoI TCCNGGA 1 cut(s) 1291
PkrI GCNGC 6 cut(s) 479, 754, 862, 865, 1705, 2011
PleI GAGTC 9 cut(s) 61, 151, 173, 185, 215, 422, 583, 602, 1744
PpsI GAGTC 9 cut(s) 61, 151, 173, 185, 215, 422, 583, 602, 1744
PsiI TTATAA 1 cut(s) 1566
Psp124BI GAGCTC 1 cut(s) 330
Psp6I CCWGG 4 cut(s) 262, 600, 811, 2156
PspEI GGTNACC 1 cut(s) 1274
PspFI CCCAGC 1 cut(s) 253
PspGI CCWGG 4 cut(s) 262, 600, 811, 2156
PspN4I GGNNCC 8 cut(s) 15, 465, 512, 1443, 1468, 1614, 1984, 2371
PspPI GGNCC 9 cut(s) 13, 266, 281, 363, 463, 534, 1330, 1441, 1670
PstI CTGCAG 1 cut(s) 865
PstNI CAGNNNCTG 1 cut(s) 2241
PsuI RGATCY 2 cut(s) 868, 1612
PsyI GACNNNGTC 2 cut(s) 41, 300
RsaI GTAC 1 cut(s) 1373
RsaNI GTAC 1 cut(s) 1372
Rsr2I CGGWCCG 2 cut(s) 281, 363
RsrII CGGWCCG 2 cut(s) 281, 363
SacI GAGCTC 1 cut(s) 330
SalI GTCGAC 2 cut(s) 425, 605
SatI GCNGC 6 cut(s) 478, 753, 861, 864, 1704, 2010
Sau96I GGNCC 9 cut(s) 13, 266, 281, 363, 463, 534, 1330, 1441, 1670
SchI GAGTC 9 cut(s) 62, 151, 173, 185, 215, 422, 584, 602, 1745
ScrFI CCNGG 9 cut(s) 264, 279, 559, 560, 602, 813, 1293, 2158, 2374
SduI GDGCHC 6 cut(s) 204, 279, 330, 594, 636, 1823
SexAI ACCWGGT 1 cut(s) 262
SfaNI GCATC 5 cut(s) 154, 1192, 1498, 1690, 1828
SfcI CTRYAG 1 cut(s) 861
SgrAI CRCCGGYG 1 cut(s) 661
SinI GGWCC 7 cut(s) 13, 266, 281, 363, 463, 534, 1441
SmaI CCCGGG 1 cut(s) 560
SmlI CTYRAG 2 cut(s) 183, 1457
SmoI CTYRAG 2 cut(s) 183, 1457
SseBI AGGCCT 3 cut(s) 243, 600, 811
SspI AATATT 1 cut(s) 2216
SspMI CTAG 5 cut(s) 924, 1014, 1824, 2178, 2417
SstI GAGCTC 1 cut(s) 330
StuI AGGCCT 3 cut(s) 243, 600, 811
StyD4I CCNGG 9 cut(s) 262, 277, 557, 558, 600, 811, 1291, 2156, 2372
StyI CCWWGG 1 cut(s) 1233
TaaI ACNGT 3 cut(s) 1357, 1441, 2190
TaiI ACGT 7 cut(s) 42, 301, 384, 390, 462, 1135, 2226
TaqI TCGA 9 cut(s) 48, 426, 450, 578, 606, 702, 1077, 1119, 1129
TaqII GACCGA 1 cut(s) 380
TauI GCSGC 2 cut(s) 480, 755
TfiI GAWTC 6 cut(s) 580, 894, 1010, 2174, 2266, 2378
TscAI CASTG 5 cut(s) 417, 999, 1821, 1999, 2193
TseFI GTSAC 1 cut(s) 1274
TseI GCWGC 4 cut(s) 860, 863, 1703, 2009
Tsp45I GTSAC 1 cut(s) 1274
TspDTI ATGAA 4 cut(s) 854, 935, 1362, 1851
TspGWI ACGGA 5 cut(s) 26, 330, 338, 452, 1081
TspMI CCCGGG 1 cut(s) 558
TspRI CASTG 5 cut(s) 417, 999, 1821, 1999, 2193
Tth111I GACNNNGTC 2 cut(s) 41, 300
Van91I CCANNNNNTGG 1 cut(s) 520
Vha464I CTTAAG 1 cut(s) 1457
VneI GTGCAC 1 cut(s) 1819
VpaK11BI GGWCC 7 cut(s) 13, 266, 281, 363, 463, 534, 1441
XagI CCTNNNNNAGG 1 cut(s) 1325
XapI RAATTY 6 cut(s) 685, 997, 1475, 2201, 2330, 2430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1231
XmaI CCCGGG 1 cut(s) 558
XmiI GTMKAC 2 cut(s) 426, 606
XmnI GAANNNNTTC 2 cut(s) 314, 1125
XspI CTAG 5 cut(s) 924, 1014, 1824, 2178, 2417
ZraI GACGTC 2 cut(s) 40, 299
Zsp2I ATGCAT 1 cut(s) 1980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.