Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014492

Physical Location & Seq

Genomic Coordinates Forward (+)

6197365 .. 6199776

Gene Structure 2412 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00164150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGAAGCAGCGGACCGACCCCAAAACCCTTCCGATAACCAAAACGACGTCGTCTCCGGCGATTCCTCGCCGGAAACTGACCTCACCCGCTCATCGAGCCCTCAGGAAAACAACCAAAACGATTCACAGAACCAGTCCTCGGAAAACCCGTCGGCACCACCGCAAGCGCCCATTTCGGACTCTCAAGACGACTCCTCCGAACCCATCCCTGAAGACGCCCCTAATGAACCGCCTCAAAACCCCGCCGGGCCGGGACCGGGTCCAGCAGAGACCACCAGCCTTCCGGCGAAACGACGGCGTCGCAGGAAGAAGTTTTTCACGGAGCTGATCGGCACTCCGTCGATGGCCAAGAGCCGCCGGACCGACCTCAACAAAGAGGTCGACACCGAAGCCCTGATCGCACTCTCGGTGGGGTTTCCGGTAGACTCGCTCACCGAGGAGGAGATCGAGGCGAACGTGGTCCCCACCATCGGCGGAGTGGAGCAGGCCAACTATATCGTCGTCCGGAACCACATTCTGTCCAGGTGGCGGTCCAATGTTTCGTTCTGGTTGACCAGGGAGCTGGCTCTGGAGTCGATTCGGCTGGAGCATAAAGGATTGGTCGACAAAGCTTACAATTTTCTGGTGGAGCACGGCTACATCAACTTCGGGCTAGCTCCGGCGATTAAAGAAGTGAAATTGAGGTCGTTTGATGGGTCTGAGAGGGGCAATGTGGTAATTGTGGGAGCTGGTTTGGCCGGTTTGGTGGCGGCCAGGCAGTTGGTGTTTTTGGGGTTCAAAGTTGTGGTATTGGAAGGCAGGAGTAGGCCTGGAGGGAGAGTGAAGACGAAGAAAATGAAAGGGGAGGGATTGGAGGCTGCAGCTGATCTCGGTGGGAGTGTCCTCACCGGAATAAATGGGAACCCACTAGGGGTTTTGGCTCGGCAATTGGAGCTGCCTCTTCATAAGGTGAGGGATCTTTGCCCTCTTTATTTACCAGATGGAAAATCTGTGAATTCTGAAATTGATGATAGAATAGAGGCTTCTTTTAATAAGTTGTTAGATAGAGTTTGTAAGCTTAGACATGCAATGATTGAGGAAGTTAAGTCTGTAGATGTTCCGTTAGGGACTGCACTGGAAGCTTTTCGAAGAGTGTGTAATGTGGCTCAGGATCCGCAGGAGAGAATGCTCTTGGATTGGCATCTTGCTAATTTGGAATATGCAAATGCCACCTTGATGTCTAATTTGTCAATGGCGTATTGGGATCAGGATGATCCCTATGAGATGGGCGGTGACCATTGTTTTATTCCCGGAGGCAATGAGACCTTTGTGCGAGCCCTTGCAGAGGGCCTTCCAATTTTCTATGACAGGACTGTGGCAAGTATTAGGTATGGAACTGATGGGGTTTTGGTTTATGCAAATGGCCAGGAGTTTCGAGGGGACATGGTTCTTTGCACTGTCCCATTAGGTGTGCTTAAGAAGGGCTCAATTGAATTTGTCCCAGAGCTTCCACAAAGGAAGAGAGATGCAATTCAGAGTTTGGGATTTGGATTGTTGAATAAGGTTGCCATATTGTTTCCTTATAACTTTTGGGGTGGAGACATTGATACTTTTGGGCATTTGACTGAGGATCCGTGTATGAGAGGAGAATTCTTTCTGTTTTATAGCTATTCTTCTGTGTCAGGAGGCCCTCTTCTAGTTGCGCTTGTTGCAGGAGATGCTGCCATTAAGTTTGAGCTGATGTCTCCTGTGGAATCTGTGAATAGGGTGTTGGAGATACTGAGGGGCATTTTCCACCCGAAAGGTATTGCTGTTCCGGAACCTATTCAGGCAGTGTGCACTCGGTGGGGGAAGGATGACTTTGCATACGGGTCATATTCATATGTTGCAGTAGGTTCTTCAGGAGATGATTACGATATTCTTGCAGAGAGCATTGGGGATGGGAGAGTATTCTTTGCTGGAGAGGCCACTAACAAGCAGTATCCGGCAACAATGCATGGAGCTTTGCTCAGTGGGATGAGAGAGGCTGCTAACATGTTGAGAGTAGCTAAAAGGAGGTCAATAATCCCCTCACAGAAATTTAATAATGCTTCCGAGGACAATGAGGATTTGGATAAATTATTTGACACCCCTGACTTAACATTTGGGAGCTTCTCCGTTTTGTTCGATCCCAGGTCATCAGATCCTGATTCTACATCCCTGTTTAGGGTTAAACTCGGAGGGGAAAAGTTGGACATGGGATGTTTCAGTTTGTATGGCTTAATATCAAAGAAGCATGCCTTCAAGCTGAGAGATGTAGAAGGTGATGGGAACAGGATGACAATGTTGAATTTTGAATTCGGAGTGAGGCTGGTTGGGAGAAAAGGTCTGATTGGTGTTGCGGAATCTCTGATCACTTGCATTAGATTAGCAAAATCAGGTATTAAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006476 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016575 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022622 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035601 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0051276 GO:0051568 GO:0071704 GO:0071840 GO:0098732 GO:0099402 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

Amino_oxidase SWIRM

Protein Analysis

803

Amino Acids

87.97

Weight (kDa)

5.28

Isoelectric Point (pI)

51.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIRM	PF04433	143 - 216	2.1e-14	SWIRM domain
NAD_binding_8	PF13450	240 - 299	1.4e-11	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	245 - 673	2e-87	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62830
fragaria_vesca	FvH4_2g37680
malus_domestica	MD08G1004400.v1.1 MD15G1003800.v1.1
prunus_persica	Prupe.1G356300_v2.0.a1
pyrus_communis	pycom08g00320 pycom15g00270
rosa_chinensis	RchiOBHm_Chr6g0304051
rosa_laevigata	RLG00000011022
rosa_multiflora	Rmu_sc0003805.1_g000012
rosa_roxburghii	Rroxscaffold_7G00164150
rosa_rugosa	Rorug06G0327300
rosa_samantha	Rh6AG441100 Rh6BG461700 Rh6CG453300 Rh6DG440600
rosa_wichuraiana	Rw6G038220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1563
AatII	GACGTC	1 cut(s)	51
AccB1I	GGYRCC	1 cut(s)	154
AccBSI	CCGCTC	1 cut(s)	90
AccI	GTMKAC	3 cut(s)	381, 423, 603
AccIII	TCCGGA	2 cut(s)	504, 1795
AclWI	GGATC	9 cut(s)	963, 1145, 1158, 1247, 1251, 1604, 1617, 2141, 2156
AcoI	YGGCCR	4 cut(s)	345, 735, 750, 1402
AcsI	RAATTY	6 cut(s)	994, 1472, 1628, 2057, 2308, 2315
AcuI	CTGAAG	2 cut(s)	231, 1863
AcyI	GRCGYC	3 cut(s)	48, 216, 298
AdeI	CACNNNGTG	1 cut(s)	1824
AfiI	CCNNNNNNNGG	8 cut(s)	139, 257, 470, 528, 910, 1324, 2184, 2185
AflII	CTTAAG	1 cut(s)	1454
AflIII	ACRYGT	1 cut(s)	2013
AgsI	TTSAA	6 cut(s)	778, 1472, 1537, 2263, 2308, 2315
AjnI	CCWGG	6 cut(s)	521, 554, 752, 808, 1404, 2150
AjuI	GAANNNNNNNTTGG	4 cut(s)	527, 559, 1733, 1765
Alw21I	GWGCWC	2 cut(s)	633, 1820
Alw26I	GTCTC	5 cut(s)	58, 263, 1295, 1572, 1728
Alw44I	GTGCAC	1 cut(s)	1816
AlwI	GGATC	9 cut(s)	963, 1145, 1158, 1247, 1251, 1604, 1617, 2141, 2156
AlwNI	CAGNNNCTG	1 cut(s)	2165
Aor13HI	TCCGGA	2 cut(s)	504, 1795
ApaLI	GTGCAC	1 cut(s)	1816
ApeKI	GCWGC	6 cut(s)	8, 857, 860, 934, 1700, 2006
ApoI	RAATTY	6 cut(s)	994, 1472, 1628, 2057, 2308, 2315
ArsI	GACNNNNNNTTYG	2 cut(s)	2105, 2137
Asp700I	GAANNNNTTC	4 cut(s)	314, 1122, 1632, 1803
AspLEI	GCGC	2 cut(s)	169, 1684
AspS9I	GGNCC	9 cut(s)	13, 248, 254, 260, 360, 460, 531, 1327, 1667
AsuC2I	CCSGG	4 cut(s)	247, 252, 258, 1290
AsuHPI	GGTGA	6 cut(s)	76, 424, 877, 961, 1283, 2294
AsuII	TTCGAA	1 cut(s)	1126
AsuNHI	GCTAGC	1 cut(s)	652
AvaII	GGWCC	6 cut(s)	13, 254, 260, 360, 460, 531
AxyI	CCTNAGG	1 cut(s)	102
BaeGI	GKGCMC	1 cut(s)	1820
BalI	TGGCCA	2 cut(s)	347, 1404
BamHI	GGATCC	2 cut(s)	1150, 1609
BanI	GGYRCC	1 cut(s)	154
BanII	GRGCYC	3 cut(s)	101, 1318, 1466
BbsI	GAAGAC	2 cut(s)	219, 830
Bbv12I	GWGCWC	2 cut(s)	633, 1820
BbvI	GCAGC	6 cut(s)	20, 844, 872, 921, 1687, 1993
BccI	CCATC	9 cut(s)	212, 337, 476, 686, 974, 1258, 1373, 1913, 2279
BceAI	ACGGC	2 cut(s)	311, 649
BcgI	CGANNNNNNTGC	2 cut(s)	1883, 1917
BciT130I	CCWGG	6 cut(s)	523, 556, 754, 810, 1406, 2152
BciVI	GTATCC	1 cut(s)	1971
BclI	TGATCA	1 cut(s)	2370
BcnI	CCSGG	4 cut(s)	247, 252, 258, 1290
BcoDI	GTCTC	5 cut(s)	58, 263, 1295, 1572, 1728
BfaI	CTAG	3 cut(s)	653, 908, 1676
BfmI	CTRYAG	2 cut(s)	858, 1089
BfoI	RGCGCY	1 cut(s)	170
BfrI	CTTAAG	1 cut(s)	1454
BfuI	GTATCC	1 cut(s)	1971
BisI	GCNGC	8 cut(s)	9, 355, 750, 858, 861, 935, 1701, 2007
BlsI	GCNGC	8 cut(s)	10, 356, 751, 859, 862, 936, 1702, 2008
Bme18I	GGWCC	6 cut(s)	13, 254, 260, 360, 460, 531
BmgT120I	GGNCC	9 cut(s)	13, 248, 254, 260, 360, 460, 531, 1327, 1667
BmiI	GGNNCC	9 cut(s)	156, 255, 261, 462, 509, 902, 1152, 1611, 1800
BmsI	GCATC	3 cut(s)	1189, 1495, 1687
BmtI	GCTAGC	1 cut(s)	656
BpiI	GAAGAC	2 cut(s)	219, 830
BplI	GAGNNNNNCTC	2 cut(s)	1971, 2003
BpmI	CTGGAG	4 cut(s)	590, 605, 831, 1959
Bpu10I	CCTNAGC	1 cut(s)	1146
Bpu14I	TTCGAA	1 cut(s)	1126
BpuEI	CTTGAG	1 cut(s)	168
BpuMI	CCSGG	4 cut(s)	247, 252, 258, 1290
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaHI	GRCGYC	3 cut(s)	48, 216, 298
BsaI	GGTCTC	2 cut(s)	263, 1295
BsaJI	CCNNGG	5 cut(s)	138, 435, 555, 2073, 2150
BsaWI	WCCGGW	4 cut(s)	418, 504, 887, 1795
BsaXI	ACNNNNNCTCC	8 cut(s)	38, 68, 179, 209, 804, 834, 2329, 2359
Bsc4I	CCNNNNNNNGG	8 cut(s)	139, 257, 470, 528, 910, 1324, 2184, 2185
Bse118I	RCCGGY	1 cut(s)	737
Bse1I	ACTGG	2 cut(s)	133, 1119
Bse21I	CCTNAGG	1 cut(s)	102
Bse3DI	GCAATG	3 cut(s)	715, 1074, 1303
Bse8I	GATNNNNATC	1 cut(s)	1179
BseAI	TCCGGA	2 cut(s)	504, 1795
BseBI	CCWGG	6 cut(s)	523, 556, 754, 810, 1406, 2152
BseDI	CCNNGG	5 cut(s)	138, 435, 555, 2073, 2150
BseGI	GGATG	8 cut(s)	204, 1255, 1840, 1924, 2001, 2174, 2225, 2301
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	8 cut(s)	139, 257, 470, 528, 910, 1324, 2184, 2185
BseMI	GCAATG	3 cut(s)	715, 1074, 1303
BseMII	CTCAG	7 cut(s)	116, 690, 1160, 1596, 1751, 2002, 2258
BseNI	ACTGG	2 cut(s)	133, 1119
BseRI	GAGGAG	4 cut(s)	184, 452, 455, 1638
BseSI	GKGCMC	1 cut(s)	1820
BseXI	GCAGC	6 cut(s)	20, 844, 872, 921, 1687, 1993
BsgI	GTGCAG	1 cut(s)	1095
BshNI	GGYRCC	1 cut(s)	154
BsiHKAI	GWGCWC	2 cut(s)	633, 1820
BslFI	GGGAC	6 cut(s)	267, 446, 1120, 1424, 1433, 1463
BslI	CCNNNNNNNGG	8 cut(s)	139, 257, 470, 528, 910, 1324, 2184, 2185
BsmAI	GTCTC	5 cut(s)	58, 263, 1295, 1572, 1728
BsmBI	CGTCTC	1 cut(s)	58
BsmFI	GGGAC	6 cut(s)	267, 446, 1120, 1424, 1433, 1463
BsmI	GAATGC	1 cut(s)	1170
Bso31I	GGTCTC	2 cut(s)	263, 1295
Bsp119I	TTCGAA	1 cut(s)	1126
Bsp1286I	GDGCHC	5 cut(s)	101, 633, 1318, 1466, 1820
Bsp13I	TCCGGA	2 cut(s)	504, 1795
BspCNI	CTCAG	7 cut(s)	115, 691, 1159, 1597, 1752, 2001, 2259
BspEI	TCCGGA	2 cut(s)	504, 1795
BspLI	GGNNCC	9 cut(s)	156, 255, 261, 462, 509, 902, 1152, 1611, 1800
BspMAI	CTGCAG	1 cut(s)	862
BspOI	GCTAGC	1 cut(s)	656
BspPI	GGATC	9 cut(s)	963, 1145, 1158, 1247, 1251, 1604, 1617, 2141, 2156
BspT104I	TTCGAA	1 cut(s)	1126
BspT107I	GGYRCC	1 cut(s)	154
BspTI	CTTAAG	1 cut(s)	1454
BspTNI	GGTCTC	2 cut(s)	263, 1295
BsrBI	CCGCTC	1 cut(s)	90
BsrDI	GCAATG	3 cut(s)	715, 1074, 1303
BsrFI	RCCGGY	1 cut(s)	737
BsrI	ACTGG	2 cut(s)	133, 1119
BssAI	RCCGGY	1 cut(s)	737
BssECI	CCNNGG	5 cut(s)	138, 435, 555, 2073, 2150
BssNI	GRCGYC	3 cut(s)	48, 216, 298
Bst2UI	CCWGG	6 cut(s)	523, 556, 754, 810, 1406, 2152
Bst4CI	ACNGT	3 cut(s)	1354, 1438, 2409
Bst6I	CTCTTC	4 cut(s)	945, 1123, 1493, 1677
BstACI	GRCGYC	3 cut(s)	48, 216, 298
BstAFI	CTTAAG	1 cut(s)	1454
BstAPI	GCANNNNNTGC	1 cut(s)	1697
BstBI	TTCGAA	1 cut(s)	1126
BstC8I	GCNNGC	6 cut(s)	165, 486, 564, 654, 1314, 2256
BstDEI	CTNAG	8 cut(s)	102, 699, 1058, 1146, 1605, 1760, 1988, 2267
BstEII	GGTNACC	1 cut(s)	1271
BstENI	CCTNNNNNAGG	1 cut(s)	1322
BstF5I	GGATG	8 cut(s)	204, 1255, 1840, 1924, 2001, 2174, 2225, 2301
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	2 cut(s)	169, 1684
BstMAI	GTCTC	5 cut(s)	58, 263, 1295, 1572, 1728
BstMWI	GCNNNNNNNGC	8 cut(s)	96, 398, 734, 931, 1118, 1688, 1697, 1943
BstNI	CCWGG	6 cut(s)	523, 556, 754, 810, 1406, 2152
BstNSI	RCATGY	3 cut(s)	1067, 2017, 2258
BstPI	GGTNACC	1 cut(s)	1271
BstSFI	CTRYAG	2 cut(s)	858, 1089
BstSLI	GKGCMC	1 cut(s)	1820
BstV1I	GCAGC	6 cut(s)	20, 844, 872, 921, 1687, 1993
BstV2I	GAAGAC	2 cut(s)	219, 830
BstX2I	RGATCY	4 cut(s)	955, 1150, 1609, 2161
BstXI	CCANNNNNNTGG	2 cut(s)	562, 760
BstYI	RGATCY	4 cut(s)	955, 1150, 1609, 2161
Bsu36I	CCTNAGG	1 cut(s)	102
BsuI	GTATCC	1 cut(s)	1971
BtsCI	GGATG	8 cut(s)	204, 1255, 1840, 1924, 2001, 2174, 2225, 2301
BtsI	GCAGTG	1 cut(s)	1818
BtsIMutI	CAGTG	4 cut(s)	1112, 1434, 1818, 1996
Cac8I	GCNNGC	6 cut(s)	165, 486, 564, 654, 1314, 2256
CaiI	CAGNNNCTG	1 cut(s)	2165
CfoI	GCGC	2 cut(s)	169, 1684
Cfr10I	RCCGGY	1 cut(s)	737
Cfr13I	GGNCC	9 cut(s)	13, 248, 254, 260, 360, 460, 531, 1327, 1667
CpoI	CGGWCCG	2 cut(s)	13, 360
CseI	GACGC	2 cut(s)	224, 287
CspI	CGGWCCG	2 cut(s)	13, 360
CviAII	CATG	6 cut(s)	1064, 1423, 1976, 2014, 2215, 2255
DdeI	CTNAG	8 cut(s)	102, 699, 1058, 1146, 1605, 1760, 1988, 2267
DraIII	CACNNNGTG	1 cut(s)	1824
EaeI	YGGCCR	4 cut(s)	345, 735, 750, 1402
Eam1104I	CTCTTC	4 cut(s)	945, 1123, 1493, 1677
EarI	CTCTTC	4 cut(s)	945, 1123, 1493, 1677
EciI	GGCGGA	1 cut(s)	489
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	3 cut(s)	101, 1318, 1466
Eco31I	GGTCTC	2 cut(s)	263, 1295
Eco47I	GGWCC	6 cut(s)	13, 254, 260, 360, 460, 531
Eco57I	CTGAAG	2 cut(s)	231, 1863
Eco81I	CCTNAGG	1 cut(s)	102
Eco91I	GGTNACC	1 cut(s)	1271
EcoNI	CCTNNNNNAGG	1 cut(s)	1322
EcoO109I	RGGNCCY	2 cut(s)	1327, 1667
EcoO65I	GGTNACC	1 cut(s)	1271
EcoRI	GAATTC	3 cut(s)	994, 1628, 2315
EcoRII	CCWGG	6 cut(s)	521, 554, 752, 808, 1404, 2150
EcoT22I	ATGCAT	1 cut(s)	1977
EcoT38I	GRGCYC	3 cut(s)	101, 1318, 1466
Esp3I	CGTCTC	1 cut(s)	58
FaeI	CATG	6 cut(s)	1067, 1426, 1979, 2017, 2218, 2258
FalI	AAGNNNNNCTT	4 cut(s)	1823, 1855, 2243, 2275
FaqI	GGGAC	6 cut(s)	267, 446, 1120, 1424, 1433, 1463
FatI	CATG	6 cut(s)	1063, 1422, 1975, 2013, 2214, 2254
FauI	CCCGC	2 cut(s)	95, 250
FauNDI	CATATG	1 cut(s)	1861
FbaI	TGATCA	1 cut(s)	2370
FblI	GTMKAC	3 cut(s)	381, 423, 603
Fnu4HI	GCNGC	8 cut(s)	9, 355, 750, 858, 861, 935, 1701, 2007
FokI	GGATG	8 cut(s)	191, 1262, 1847, 1931, 2008, 2161, 2232, 2308
FriOI	GRGCYC	3 cut(s)	101, 1318, 1466
Fsp4HI	GCNGC	8 cut(s)	9, 355, 750, 858, 861, 935, 1701, 2007
FspBI	CTAG	3 cut(s)	653, 908, 1676
GlaI	GCGC	2 cut(s)	168, 1683
GluI	GCNGC	8 cut(s)	9, 355, 750, 858, 861, 935, 1701, 2007
GsuI	CTGGAG	4 cut(s)	590, 605, 831, 1959
HaeII	RGCGCY	1 cut(s)	170
HgaI	GACGC	2 cut(s)	224, 287
HhaI	GCGC	2 cut(s)	169, 1684
Hin1I	GRCGYC	3 cut(s)	48, 216, 298
Hin1II	CATG	6 cut(s)	1067, 1426, 1979, 2017, 2218, 2258
Hin6I	GCGC	2 cut(s)	167, 1682
HinP1I	GCGC	2 cut(s)	167, 1682
HincII	GTYRAC	3 cut(s)	382, 552, 604
HindII	GTYRAC	3 cut(s)	382, 552, 604
HindIII	AAGCTT	3 cut(s)	609, 1055, 1119
HphI	GGTGA	6 cut(s)	76, 424, 877, 961, 1283, 2294
Hpy166II	GTNNAC	5 cut(s)	382, 424, 552, 604, 1818
Hpy8I	GTNNAC	5 cut(s)	382, 424, 552, 604, 1818
Hpy99I	CGWCG	7 cut(s)	50, 53, 154, 297, 303, 343, 503
HpyAV	CCTTC	8 cut(s)	39, 290, 788, 1340, 1453, 1825, 2269, 2273
HpyCH4III	ACNGT	3 cut(s)	1354, 1438, 2409
HpyCH4IV	ACGT	2 cut(s)	48, 456
HpyF10VI	GCNNNNNNNGC	8 cut(s)	96, 398, 734, 931, 1118, 1688, 1697, 1943
HpyF3I	CTNAG	8 cut(s)	102, 699, 1058, 1146, 1605, 1760, 1988, 2267
HpySE526I	ACGT	2 cut(s)	48, 456
Hsp92I	GRCGYC	3 cut(s)	48, 216, 298
Hsp92II	CATG	6 cut(s)	1067, 1426, 1979, 2017, 2218, 2258
HspAI	GCGC	2 cut(s)	167, 1682
Kpn2I	TCCGGA	2 cut(s)	504, 1795
Ksp22I	TGATCA	1 cut(s)	2370
Lsp1109I	GCAGC	6 cut(s)	20, 844, 872, 921, 1687, 1993
LweI	GCATC	3 cut(s)	1189, 1495, 1687
MaeI	CTAG	3 cut(s)	653, 908, 1676
MaeII	ACGT	2 cut(s)	48, 456
MaeIII	GTNAC	1 cut(s)	1271
MbiI	CCGCTC	1 cut(s)	90
MfeI	CAATTG	2 cut(s)	926, 1467
MflI	RGATCY	4 cut(s)	955, 1150, 1609, 2161
MhlI	GDGCHC	5 cut(s)	101, 633, 1318, 1466, 1820
MlsI	TGGCCA	2 cut(s)	347, 1404
MluNI	TGGCCA	2 cut(s)	347, 1404
MlyI	GAGTC	4 cut(s)	173, 185, 419, 581
MmeI	TCCRAC	2 cut(s)	1731, 2190
Mox20I	TGGCCA	2 cut(s)	347, 1404
Mph1103I	ATGCAT	1 cut(s)	1977
MroI	TCCGGA	2 cut(s)	504, 1795
MroXI	GAANNNNTTC	4 cut(s)	314, 1122, 1632, 1803
MscI	TGGCCA	2 cut(s)	347, 1404
MslI	CAYNNNNRTG	1 cut(s)	1214
Msp20I	TGGCCA	2 cut(s)	347, 1404
MspA1I	CMGCKG	2 cut(s)	11, 863
MspCI	CTTAAG	1 cut(s)	1454
MunI	CAATTG	2 cut(s)	926, 1467
Mva1269I	GAATGC	1 cut(s)	1170
MvaI	CCWGG	6 cut(s)	523, 556, 754, 810, 1406, 2152
MwoI	GCNNNNNNNGC	8 cut(s)	96, 398, 734, 931, 1118, 1688, 1697, 1943
NciI	CCSGG	4 cut(s)	247, 252, 258, 1290
NdeI	CATATG	1 cut(s)	1861
NheI	GCTAGC	1 cut(s)	652
NlaIII	CATG	6 cut(s)	1067, 1426, 1979, 2017, 2218, 2258
NlaIV	GGNNCC	9 cut(s)	156, 255, 261, 462, 509, 902, 1152, 1611, 1800
NmeAIII	GCCGAG	1 cut(s)	901
NmuCI	GTSAC	1 cut(s)	1271
NsiI	ATGCAT	1 cut(s)	1977
NspI	RCATGY	3 cut(s)	1067, 2017, 2258
NspV	TTCGAA	1 cut(s)	1126
PaeI	GCATGC	1 cut(s)	2258
PceI	AGGCCT	1 cut(s)	808
PciI	ACATGT	1 cut(s)	2013
PcsI	WCGNNNNNNNCGW	4 cut(s)	57, 146, 195, 453
PctI	GAATGC	1 cut(s)	1170
PdmI	GAANNNNTTC	4 cut(s)	314, 1122, 1632, 1803
PfeI	GAWTC	6 cut(s)	62, 122, 577, 1733, 2168, 2363
PflFI	GACNNNGTC	3 cut(s)	50, 258, 297
PfoI	TCCNGGA	1 cut(s)	1288
PkrI	GCNGC	8 cut(s)	10, 356, 751, 859, 862, 936, 1702, 2008
PleI	GAGTC	4 cut(s)	173, 185, 419, 580
PpsI	GAGTC	4 cut(s)	173, 185, 419, 580
PscI	ACATGT	1 cut(s)	2013
PsiI	TTATAA	1 cut(s)	1563
Psp6I	CCWGG	6 cut(s)	521, 554, 752, 808, 1404, 2150
PspEI	GGTNACC	1 cut(s)	1271
PspGI	CCWGG	6 cut(s)	521, 554, 752, 808, 1404, 2150
PspN4I	GGNNCC	9 cut(s)	156, 255, 261, 462, 509, 902, 1152, 1611, 1800
PspPI	GGNCC	9 cut(s)	13, 248, 254, 260, 360, 460, 531, 1327, 1667
PstI	CTGCAG	1 cut(s)	862
PstNI	CAGNNNCTG	1 cut(s)	2165
PsuI	RGATCY	4 cut(s)	955, 1150, 1609, 2161
PsyI	GACNNNGTC	3 cut(s)	50, 258, 297
PvuII	CAGCTG	1 cut(s)	863
RseI	CAYNNNNRTG	1 cut(s)	1214
Rsr2I	CGGWCCG	2 cut(s)	13, 360
RsrII	CGGWCCG	2 cut(s)	13, 360
SalI	GTCGAC	2 cut(s)	380, 602
SatI	GCNGC	8 cut(s)	9, 355, 750, 858, 861, 935, 1701, 2007
Sau96I	GGNCC	9 cut(s)	13, 248, 254, 260, 360, 460, 531, 1327, 1667
SchI	GAGTC	4 cut(s)	173, 185, 419, 581
SduI	GDGCHC	5 cut(s)	101, 633, 1318, 1466, 1820
SfaNI	GCATC	3 cut(s)	1189, 1495, 1687
SfcI	CTRYAG	2 cut(s)	858, 1089
SfuI	TTCGAA	1 cut(s)	1126
SinI	GGWCC	6 cut(s)	13, 254, 260, 360, 460, 531
SmiMI	CAYNNNNRTG	1 cut(s)	1214
SmlI	CTYRAG	2 cut(s)	183, 1454
SmoI	CTYRAG	2 cut(s)	183, 1454
SphI	GCATGC	1 cut(s)	2258
SseBI	AGGCCT	1 cut(s)	808
SspMI	CTAG	3 cut(s)	653, 908, 1676
StuI	AGGCCT	1 cut(s)	808
TaaI	ACNGT	3 cut(s)	1354, 1438, 2409
TaiI	ACGT	2 cut(s)	51, 459
TaqI	TCGA	9 cut(s)	95, 341, 381, 447, 575, 603, 1126, 1414, 2145
TaqII	GACCGA	2 cut(s)	30, 377
TauI	GCSGC	2 cut(s)	357, 752
TfiI	GAWTC	6 cut(s)	62, 122, 577, 1733, 2168, 2363
TscAI	CASTG	4 cut(s)	1119, 1441, 1818, 1996
TseFI	GTSAC	1 cut(s)	1271
TseI	GCWGC	6 cut(s)	8, 857, 860, 934, 1700, 2006
Tsp45I	GTSAC	1 cut(s)	1271
TspDTI	ATGAA	4 cut(s)	240, 851, 932, 1848
TspGWI	ACGGA	5 cut(s)	327, 335, 1089, 1602, 2125
TspRI	CASTG	4 cut(s)	1119, 1441, 1818, 1996
Tth111I	GACNNNGTC	3 cut(s)	50, 258, 297
Vha464I	CTTAAG	1 cut(s)	1454
VneI	GTGCAC	1 cut(s)	1816
VpaK11BI	GGWCC	6 cut(s)	13, 254, 260, 360, 460, 531
XagI	CCTNNNNNAGG	1 cut(s)	1322
XapI	RAATTY	6 cut(s)	994, 1472, 1628, 2057, 2308, 2315
XceI	RCATGY	3 cut(s)	1067, 2017, 2258
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XmiI	GTMKAC	3 cut(s)	381, 423, 603
XmnI	GAANNNNTTC	4 cut(s)	314, 1122, 1632, 1803
XspI	CTAG	3 cut(s)	653, 908, 1676
ZraI	GACGTC	1 cut(s)	49
Zsp2I	ATGCAT	1 cut(s)	1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.