FvH4_2g40130

Acyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
28663688 .. 28667702
4015 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40130.t3

Sequence Viewer

Length: 1179 bp
ATGGAGTCGGAACTCAAAGACCTCAATTCCCAACCGGCATCCAAGCCCGCCTCCCACGGCGGCGGATCGTCGGCCAAGGACGACCGCCCGCTCCTCAAACCCGACCCGGCCCCGTCGGTCTCCGCCGAGGAGCTCCAGGAGCTCGAGAAGAAATGCGCCGCCTACGTCCGCAGCGACGCCTACGGCACCATGGGACGCGGCGACTTGCCGCTCAAGGAGAAGCTCCTCCTCGGCGTTGCTCTCGTCACTCTCGTCCCCATACGCGTCGTCCTCAGCATGACGCTCCTCCTCTTCTACTACTTGATTTGCAGGATTTGCACGCTCGGATTGTCGCCGAATCGAGACGAGGACGAGCAGGAGGACTATGCGCACATGGGAGGCTGGAGAAGAGCCGTGATTGTCTGGTGCGGCCGATCCTTGTCCAGAGTCATGCTCTCTGTGCTAGGGTTTTATTGGATCAGCGAAACCTATAGGATACCTGATGCTGCTCAACAATCCAAGCCTGAGGGGAAAGAGGAGAGTGCAGAGGAGGCTGAGAAGCCTGGGGCTATTATATCTAACCATGTATCGTATTTGGATATCTTGTATCACATGTCCTCGTCCTTTCCAAGCTTTGTTGCCAAGAGATCGGTGGCGAAACTTCCTCTAGTTGGCCTCATCAGCAAGTGCCTCGGTTGTGTCTATGTTCAGCGGGAGTCAAAATCATCCGACTTCAAGGGTGTTGCAGGTGTTGTGACAGATAGAGTTCAAGAAGCACATCAGAATAAATCTGCACCACAAATTATGCTTTTCCCAGAAGGTACTACTACAAATGGGGACTTCCTTCTGCCATTCAAGACGGGCGCATTTTTGGCTAAAGCTCCAGTGCTTCCAGTGATTCTTAGATATCCTTACCAGAGATTTAGTCCTGCCTGGGACTCGATATCTGGGGTGAGACATGTGATATATCTTCTCTGTCAATTTGTAAATCACATAGAGGTCACAAGGTTACCTGTTTATTACCCTTCACAAGAAGAAAAGGATGACCCAAAACTCTACGCTGATAATGTCAGAAGACTGATGGCCAGTGAGGGTGGCATGACTCTGGCAGATATCGGGCTTGCTGAGAAGCGTGTATATCATGCTGCGCTTAATGGTAATAATAGCCATCCTAGTGTTTTGCATCAGAAAGACGATTGA

Protein Analysis

393

Amino Acids

43.43

Weight (kDa)

6.57

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 173 - 294 1.8e-18 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 716
Acc16I TGCGCA 1 cut(s) 369
Acc36I ACCTGC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 185
AccBSI CCGCTC 2 cut(s) 91, 211
AccII CGCG 2 cut(s) 198, 264
AclWI GGATC 3 cut(s) 73, 408, 464
AcoI YGGCCR 3 cut(s) 72, 409, 1062
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 1 cut(s) 802
AfiI CCNNNNNNNGG 1 cut(s) 650
AflIII ACRYGT 3 cut(s) 262, 591, 937
AgsI TTSAA 3 cut(s) 715, 749, 835
AjnI CCWGG 3 cut(s) 135, 541, 911
AluBI AGCT 5 cut(s) 133, 142, 223, 612, 860
AluI AGCT 5 cut(s) 133, 142, 223, 612, 860
Alw21I GWGCWC 2 cut(s) 135, 144
Alw26I GTCTC 3 cut(s) 124, 336, 928
AlwI GGATC 3 cut(s) 73, 408, 464
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 5 cut(s) 72, 108, 409, 652, 1062
ApeKI GCWGC 3 cut(s) 171, 485, 1124
AspLEI GCGC 4 cut(s) 158, 370, 845, 1129
AspS9I GGNCC 1 cut(s) 109
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 1 cut(s) 943
AvaI CYCGRG 1 cut(s) 143
AxyI CCTNAGG 1 cut(s) 504
BalI TGGCCA 1 cut(s) 1064
BanI GGYRCC 1 cut(s) 185
BanII GRGCYC 2 cut(s) 135, 144
BbsI GAAGAC 1 cut(s) 1060
Bbv12I GWGCWC 2 cut(s) 135, 144
BbvCI CCTCAGC 1 cut(s) 272
BbvI GCAGC 3 cut(s) 183, 472, 1111
BccI CCATC 2 cut(s) 1054, 1155
BceAI ACGGC 3 cut(s) 73, 199, 377
BcgI CGANNNNNNTGC 2 cut(s) 652, 686
BciT130I CCWGG 3 cut(s) 137, 543, 913
BciVI GTATCC 1 cut(s) 468
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 3 cut(s) 124, 336, 928
BfaI CTAG 3 cut(s) 443, 647, 1152
BfmI CTRYAG 1 cut(s) 469
BfuAI ACCTGC 1 cut(s) 716
BfuI GTATCC 1 cut(s) 468
BisI GCNGC 8 cut(s) 61, 159, 172, 199, 209, 409, 486, 1125
BlsI GCNGC 8 cut(s) 62, 160, 173, 200, 210, 410, 487, 1126
Bme1390I CCNGG 4 cut(s) 107, 137, 543, 913
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 1 cut(s) 109
BmiI GGNNCC 2 cut(s) 111, 187
BmrFI CCNGG 4 cut(s) 107, 137, 543, 913
BmsI GCATC 3 cut(s) 47, 472, 1171
BpiI GAAGAC 1 cut(s) 1060
BplI GAGNNNNNCTC 2 cut(s) 417, 449
BpmI CTGGAG 3 cut(s) 119, 403, 846
Bpu10I CCTNAGC 1 cut(s) 272
BpuEI CTTGAG 1 cut(s) 197
BpuMI CCSGG 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 8 cut(s) 55, 75, 126, 189, 229, 542, 670, 912
Bsc4I CCNNNNNNNGG 1 cut(s) 650
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 3 cut(s) 863, 872, 1065
Bse21I CCTNAGG 1 cut(s) 504
BseBI CCWGG 3 cut(s) 137, 543, 913
BseDI CCNNGG 8 cut(s) 55, 75, 126, 189, 229, 542, 670, 912
BseGI GGATG 4 cut(s) 38, 704, 1027, 1147
BseLI CCNNNNNNNGG 1 cut(s) 650
BseMII CTCAG 4 cut(s) 286, 495, 525, 1095
BseNI ACTGG 3 cut(s) 863, 872, 1065
BseRI GAGGAG 8 cut(s) 83, 143, 215, 218, 275, 278, 530, 542
BseX3I CGGCCG 1 cut(s) 409
BseXI GCAGC 3 cut(s) 183, 472, 1111
BsgI GTGCAG 2 cut(s) 543, 756
Bsh1236I CGCG 2 cut(s) 198, 264
Bsh1285I CGRYCG 2 cut(s) 85, 412
BshFI GGCC 5 cut(s) 74, 110, 411, 654, 1064
BshNI GGYRCC 1 cut(s) 185
BsiEI CGRYCG 2 cut(s) 85, 412
BsiHKAI GWGCWC 2 cut(s) 135, 144
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 2 cut(s) 35, 107
BslFI GGGAC 4 cut(s) 207, 239, 830, 929
BslI CCNNNNNNNGG 1 cut(s) 650
BsmAI GTCTC 3 cut(s) 124, 336, 928
BsmBI CGTCTC 1 cut(s) 336
BsmFI GGGAC 4 cut(s) 207, 239, 830, 929
BsnI GGCC 5 cut(s) 74, 110, 411, 654, 1064
Bso31I GGTCTC 1 cut(s) 124
BsoBI CYCGRG 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 135, 144
Bsp143I GATC 4 cut(s) 65, 413, 456, 626
Bsp19I CCATGG 1 cut(s) 189
BspANI GGCC 5 cut(s) 74, 110, 411, 654, 1064
BspCNI CTCAG 4 cut(s) 285, 496, 526, 1096
BspFNI CGCG 2 cut(s) 198, 264
BspLI GGNNCC 2 cut(s) 111, 187
BspMI ACCTGC 1 cut(s) 716
BspPI GGATC 3 cut(s) 73, 408, 464
BspQI GCTCTTC 1 cut(s) 382
BspT107I GGYRCC 1 cut(s) 185
BspTNI GGTCTC 1 cut(s) 124
BsrBI CCGCTC 2 cut(s) 91, 211
BsrFI RCCGGY 1 cut(s) 34
BsrI ACTGG 3 cut(s) 863, 872, 1065
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 8 cut(s) 55, 75, 126, 189, 229, 542, 670, 912
BssMI GATC 4 cut(s) 65, 413, 456, 626
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 2 cut(s) 75, 189
Bst2UI CCWGG 3 cut(s) 137, 543, 913
Bst6I CTCTTC 2 cut(s) 296, 382
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 315
BstC8I GCNNGC 4 cut(s) 48, 89, 320, 1101
BstDEI CTNAG 5 cut(s) 272, 504, 534, 881, 1104
BstDSI CCRYGG 2 cut(s) 55, 189
BstEII GGTNACC 1 cut(s) 987
BstF5I GGATG 4 cut(s) 38, 704, 1027, 1147
BstFNI CGCG 2 cut(s) 198, 264
BstHHI GCGC 4 cut(s) 158, 370, 845, 1129
BstKTI GATC 4 cut(s) 68, 416, 459, 629
BstMAI GTCTC 3 cut(s) 124, 336, 928
BstMBI GATC 4 cut(s) 65, 413, 456, 626
BstMCI CGRYCG 2 cut(s) 85, 412
BstMWI GCNNNNNNNGC 6 cut(s) 139, 315, 439, 530, 660, 851
BstNI CCWGG 3 cut(s) 137, 543, 913
BstNSI RCATGY 2 cut(s) 595, 941
BstPI GGTNACC 1 cut(s) 987
BstSCI CCNGG 4 cut(s) 105, 135, 541, 911
BstSFI CTRYAG 1 cut(s) 469
BstUI CGCG 2 cut(s) 198, 264
BstV1I GCAGC 3 cut(s) 183, 472, 1111
BstV2I GAAGAC 1 cut(s) 1060
BstZI CGGCCG 1 cut(s) 409
Bsu36I CCTNAGG 1 cut(s) 504
BsuI GTATCC 1 cut(s) 468
BsuRI GGCC 5 cut(s) 74, 110, 411, 654, 1064
BtgI CCRYGG 2 cut(s) 55, 189
BtsCI GGATG 4 cut(s) 38, 704, 1027, 1147
BtsIMutI CAGTG 3 cut(s) 870, 879, 1072
BveI ACCTGC 1 cut(s) 716
Cac8I GCNNGC 4 cut(s) 48, 89, 320, 1101
CfoI GCGC 4 cut(s) 158, 370, 845, 1129
Cfr10I RCCGGY 1 cut(s) 34
Cfr13I GGNCC 1 cut(s) 109
CseI GACGC 4 cut(s) 185, 204, 253, 289
Csp6I GTAC 1 cut(s) 801
CviAII CATG 9 cut(s) 190, 277, 373, 430, 563, 592, 938, 1078, 1121
CviQI GTAC 1 cut(s) 801
DdeI CTNAG 5 cut(s) 272, 504, 534, 881, 1104
DpnI GATC 4 cut(s) 67, 415, 458, 628
DpnII GATC 4 cut(s) 65, 413, 456, 626
EaeI YGGCCR 3 cut(s) 72, 409, 1062
EagI CGGCCG 1 cut(s) 409
Eam1104I CTCTTC 2 cut(s) 296, 382
EarI CTCTTC 2 cut(s) 296, 382
EciI GGCGGA 2 cut(s) 78, 112
Ecl136II GAGCTC 2 cut(s) 133, 142
EclXI CGGCCG 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 75, 189
Eco24I GRGCYC 2 cut(s) 135, 144
Eco31I GGTCTC 1 cut(s) 124
Eco32I GATATC 4 cut(s) 580, 887, 924, 1093
Eco52I CGGCCG 1 cut(s) 409
Eco53kI GAGCTC 2 cut(s) 133, 142
Eco81I CCTNAGG 1 cut(s) 504
Eco88I CYCGRG 1 cut(s) 143
Eco91I GGTNACC 1 cut(s) 987
EcoICRI GAGCTC 2 cut(s) 133, 142
EcoO65I GGTNACC 1 cut(s) 987
EcoRII CCWGG 3 cut(s) 135, 541, 911
EcoRV GATATC 4 cut(s) 580, 887, 924, 1093
EcoT14I CCWWGG 2 cut(s) 75, 189
EcoT38I GRGCYC 2 cut(s) 135, 144
ErhI CCWWGG 2 cut(s) 75, 189
Esp3I CGTCTC 1 cut(s) 336
FaeI CATG 9 cut(s) 193, 280, 376, 433, 566, 595, 941, 1081, 1124
FaqI GGGAC 4 cut(s) 207, 239, 830, 929
FatI CATG 9 cut(s) 189, 276, 372, 429, 562, 591, 937, 1077, 1120
FauI CCCGC 3 cut(s) 55, 96, 684
Fnu4HI GCNGC 8 cut(s) 61, 159, 172, 199, 209, 409, 486, 1125
FokI GGATG 4 cut(s) 25, 691, 1034, 1134
FriOI GRGCYC 2 cut(s) 135, 144
Fsp4HI GCNGC 8 cut(s) 61, 159, 172, 199, 209, 409, 486, 1125
FspAI RTGCGCAY 1 cut(s) 369
FspBI CTAG 3 cut(s) 443, 647, 1152
FspI TGCGCA 1 cut(s) 369
GlaI GCGC 4 cut(s) 157, 369, 844, 1128
GluI GCNGC 8 cut(s) 61, 159, 172, 199, 209, 409, 486, 1125
GsuI CTGGAG 3 cut(s) 119, 403, 846
HaeIII GGCC 5 cut(s) 74, 110, 411, 654, 1064
HapII CCGG 2 cut(s) 35, 107
HgaI GACGC 4 cut(s) 185, 204, 253, 289
HhaI GCGC 4 cut(s) 158, 370, 845, 1129
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 9 cut(s) 193, 280, 376, 433, 566, 595, 941, 1081, 1124
Hin6I GCGC 4 cut(s) 156, 368, 843, 1127
HinP1I GCGC 4 cut(s) 156, 368, 843, 1127
HindIII AAGCTT 1 cut(s) 610
HinfI GANTC 7 cut(s) 5, 337, 426, 695, 877, 917, 1081
HpaII CCGG 2 cut(s) 35, 107
HphI GGTGA 1 cut(s) 943
Hpy188I TCNGA 6 cut(s) 10, 326, 709, 762, 1052, 1167
Hpy188III TCNNGA 5 cut(s) 145, 341, 423, 749, 835
Hpy99I CGWCG 4 cut(s) 73, 118, 179, 269
HpyAV CCTTC 3 cut(s) 791, 833, 1014
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 6 cut(s) 309, 318, 524, 725, 773, 1162
HpyF10VI GCNNNNNNNGC 6 cut(s) 139, 315, 439, 530, 660, 851
HpyF3I CTNAG 5 cut(s) 272, 504, 534, 881, 1104
HpySE526I ACGT 1 cut(s) 165
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 9 cut(s) 193, 280, 376, 433, 566, 595, 941, 1081, 1124
HspAI GCGC 4 cut(s) 156, 368, 843, 1127
Kzo9I GATC 4 cut(s) 65, 413, 456, 626
LguI GCTCTTC 1 cut(s) 382
LmnI GCTCC 7 cut(s) 96, 130, 138, 139, 228, 288, 865
Lsp1109I GCAGC 3 cut(s) 183, 472, 1111
LweI GCATC 3 cut(s) 47, 472, 1171
MaeI CTAG 3 cut(s) 443, 647, 1152
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 4 cut(s) 244, 733, 979, 987
MalI GATC 4 cut(s) 67, 415, 458, 628
MbiI CCGCTC 2 cut(s) 91, 211
MboI GATC 4 cut(s) 65, 413, 456, 626
MboII GAAGA 6 cut(s) 160, 283, 399, 941, 1025, 1065
MhlI GDGCHC 2 cut(s) 135, 144
MlsI TGGCCA 1 cut(s) 1064
MluCI AATT 3 cut(s) 25, 780, 959
MluI ACGCGT 1 cut(s) 262
MluNI TGGCCA 1 cut(s) 1064
MlyI GAGTC 5 cut(s) 14, 435, 704, 911, 1075
MmeI TCCRAC 1 cut(s) 732
Mox20I TGGCCA 1 cut(s) 1064
MscI TGGCCA 1 cut(s) 1064
MseI TTAA 1 cut(s) 1131
MslI CAYNNNNRTG 1 cut(s) 1152
Msp20I TGGCCA 1 cut(s) 1064
MspA1I CMGCKG 1 cut(s) 691
MspI CCGG 2 cut(s) 35, 107
MspR9I CCNGG 4 cut(s) 107, 137, 543, 913
MvaI CCWGG 3 cut(s) 137, 543, 913
MvnI CGCG 2 cut(s) 198, 264
MwoI GCNNNNNNNGC 6 cut(s) 139, 315, 439, 530, 660, 851
NciI CCSGG 1 cut(s) 107
NcoI CCATGG 1 cut(s) 189
NdeII GATC 4 cut(s) 65, 413, 456, 626
NlaIII CATG 9 cut(s) 193, 280, 376, 433, 566, 595, 941, 1081, 1124
NlaIV GGNNCC 2 cut(s) 111, 187
NmeAIII GCCGAG 2 cut(s) 151, 210
NmuCI GTSAC 3 cut(s) 244, 733, 979
NsbI TGCGCA 1 cut(s) 369
NspI RCATGY 2 cut(s) 595, 941
PaeR7I CTCGAG 1 cut(s) 143
PaqCI CACCTGC 1 cut(s) 716
PciI ACATGT 2 cut(s) 591, 937
PciSI GCTCTTC 1 cut(s) 382
PcsI WCGNNNNNNNCGW 2 cut(s) 171, 249
PfeI GAWTC 2 cut(s) 337, 877
PfoI TCCNGGA 1 cut(s) 135
PkrI GCNGC 8 cut(s) 62, 160, 173, 200, 210, 410, 487, 1126
PleI GAGTC 5 cut(s) 13, 434, 703, 911, 1075
PpsI GAGTC 5 cut(s) 13, 434, 703, 911, 1075
PscI ACATGT 2 cut(s) 591, 937
Psp124BI GAGCTC 2 cut(s) 135, 144
Psp6I CCWGG 3 cut(s) 135, 541, 911
PspEI GGTNACC 1 cut(s) 987
PspGI CCWGG 3 cut(s) 135, 541, 911
PspN4I GGNNCC 2 cut(s) 111, 187
PspPI GGNCC 1 cut(s) 109
RsaI GTAC 1 cut(s) 802
RsaNI GTAC 1 cut(s) 801
RseI CAYNNNNRTG 1 cut(s) 1152
SacI GAGCTC 2 cut(s) 135, 144
SapI GCTCTTC 1 cut(s) 382
SaqAI TTAA 1 cut(s) 1131
SatI GCNGC 8 cut(s) 61, 159, 172, 199, 209, 409, 486, 1125
Sau3AI GATC 4 cut(s) 65, 413, 456, 626
Sau96I GGNCC 1 cut(s) 109
SchI GAGTC 5 cut(s) 14, 435, 704, 911, 1075
ScrFI CCNGG 4 cut(s) 107, 137, 543, 913
SduI GDGCHC 2 cut(s) 135, 144
SfaNI GCATC 3 cut(s) 47, 472, 1171
SfcI CTRYAG 1 cut(s) 469
Sfr274I CTCGAG 1 cut(s) 143
SlaI CTCGAG 1 cut(s) 143
SmiMI CAYNNNNRTG 1 cut(s) 1152
SmlI CTYRAG 2 cut(s) 143, 212
SmoI CTYRAG 2 cut(s) 143, 212
Sse9I AATT 3 cut(s) 25, 780, 959
SspMI CTAG 3 cut(s) 443, 647, 1152
SstI GAGCTC 2 cut(s) 135, 144
StyD4I CCNGG 4 cut(s) 105, 135, 541, 911
StyI CCWWGG 2 cut(s) 75, 189
TaiI ACGT 1 cut(s) 168
TaqI TCGA 3 cut(s) 144, 340, 920
TaqII GACCGA 1 cut(s) 106
TasI AATT 3 cut(s) 25, 780, 959
TauI GCSGC 5 cut(s) 63, 161, 201, 211, 411
TfiI GAWTC 2 cut(s) 337, 877
Tru1I TTAA 1 cut(s) 1131
Tru9I TTAA 1 cut(s) 1131
TscAI CASTG 3 cut(s) 870, 879, 1072
TseFI GTSAC 3 cut(s) 244, 733, 979
TseI GCWGC 3 cut(s) 171, 485, 1124
Tsp45I GTSAC 3 cut(s) 244, 733, 979
TspRI CASTG 3 cut(s) 870, 879, 1072
XceI RCATGY 2 cut(s) 595, 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 628
XhoI CTCGAG 1 cut(s) 143
XspI CTAG 3 cut(s) 443, 647, 1152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.