Rroxscaffold_7G00167600

Acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
8674291 .. 8677922
3632 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00167600.1

Sequence Viewer

Length: 1197 bp
ATGGAATCGGAGCTCAAGGACCTGAATTCCACACCGGCATCAAAGCCCTCCTCCCACGGCGGCGGAGGCGGAGGAGGCGGAGGCTCCTCCTCCGCCAAGGACGACCGCCCGCTCCTCAAACCTGACCCGGCCCCGTCCGTCTCCGCCGAGGAGCTCCAGGAGCTCGAGAAGAAATGCGCCGCCTACGTCCGCAGAGACGCCTACGGCACCATGGGACGCGGCGAGCTGTCGCTCAAGGAGAAGCTCCTGCTCGGCGTCGCCCTCGTCACTCTGGTCCCGATACGCGTGGTGGTGATCATGACGCTCCTCCTCTTCTATTACTTGATTTGTAGGATTTGCACGCTCTTCTCTTCTCCGAATCGAGACGAGGACGAGCAAGAGGACTACGCGCACATGGGAGGCTGGAGACGCGCCGTGATTGTTTGGTGCGGCCGATCCTTATCCAGAGTCATGCTGTTCGTGCTAGGGTTTTATTGGATCAGCGAAACCTATCGGATACCAGACCCTGCTCAACAATCCAAGCCTGAGGGAAAAGAGGATAGTGGAGAGGCTCAGAAGCCTGGGGCTATTATATCTAACCATGTATCGTATTTGGATATCTTGTATCACATGTCTTCTTCCTTTCCGAGCTTTGTTGCCAAGAGGTCGGTGGCGAAACTTCCTCTAGTTGGCCTCATCAGCAAGTGCCTCGGTTGTGTCTATGTTCAGCGGGAGTCAAAGACATCCGACTTCAAGGGTGTTGCAGGTGTTGTGACAGATAGAGTTCGAGAAGCACATCAGAATAAATCTGCACCACAAATTATGCTTTTCCCAGAAGGTACTACTACAAATGGAGACTTTCTTCTGCCATTCAAGACAGGAGCATTTTTGGCTAAAGCTCCGGTGCTTCCAGTGATTCTTAGATATCCTTACCAGAGATTTAGTCCTGCCTGGGACTCGATATCTGGGGTGCGACATGTGATATTTCTTCTCTGTCAATTTAAAAATCGCATAGAGGTCACAAGGTTACCTGTTTATTACCCTTCACAGGAAGAAAAGGATGACCCAAAACTCTACGCTAATAATGTCAGAAAATTGATGGCCAGTGAGGGTAGGATGACTCTGTCGGATATCGGACTTGCTGAGAAGCGGGTATATCATGCTGCGCTTAATGGTAATAATAGCCATCCTAGTGTTTTGCATCAGAAAGACGATTGA

Protein Analysis

398

Amino Acids

44.09

Weight (kDa)

8.79

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 184 - 300 2.9e-18 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 734
Acc36I ACCTGC 1 cut(s) 734
AccB1I GGYRCC 1 cut(s) 206
AccBSI CCGCTC 1 cut(s) 112
AccII CGCG 4 cut(s) 219, 285, 389, 411
AclWI GGATC 2 cut(s) 429, 485
AcoI YGGCCR 2 cut(s) 430, 1080
AcsI RAATTY 1 cut(s) 25
AcyI GRCGYC 2 cut(s) 198, 255
AfaI GTAC 1 cut(s) 820
AfiI CCNNNNNNNGG 2 cut(s) 668, 1027
AflIII ACRYGT 3 cut(s) 283, 609, 955
AgsI TTSAA 2 cut(s) 733, 853
AjnI CCWGG 3 cut(s) 156, 559, 929
AluBI AGCT 7 cut(s) 13, 154, 163, 226, 244, 630, 878
AluI AGCT 7 cut(s) 13, 154, 163, 226, 244, 630, 878
Alw21I GWGCWC 3 cut(s) 15, 156, 165
Alw26I GTCTC 5 cut(s) 145, 189, 357, 400, 828
AlwI GGATC 2 cut(s) 429, 485
AlwNI CAGNNNCTG 1 cut(s) 506
Ama87I CYCGRG 1 cut(s) 164
AoxI GGCC 4 cut(s) 129, 430, 670, 1080
ApeKI GCWGC 1 cut(s) 1142
ApoI RAATTY 1 cut(s) 25
AspLEI GCGC 4 cut(s) 179, 391, 413, 1147
AspS9I GGNCC 3 cut(s) 19, 130, 274
AsuC2I CCSGG 1 cut(s) 128
AsuHPI GGTGA 1 cut(s) 304
AvaI CYCGRG 1 cut(s) 164
AvaII GGWCC 2 cut(s) 19, 274
AxyI CCTNAGG 1 cut(s) 525
BalI TGGCCA 1 cut(s) 1082
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 3 cut(s) 15, 156, 165
BbsI GAAGAC 1 cut(s) 606
Bbv12I GWGCWC 3 cut(s) 15, 156, 165
BbvI GCAGC 1 cut(s) 1129
BccI CCATC 2 cut(s) 1072, 1173
BceAI ACGGC 3 cut(s) 73, 220, 398
BcgI CGANNNNNNTGC 2 cut(s) 670, 704
BciT130I CCWGG 3 cut(s) 158, 561, 931
BciVI GTATCC 1 cut(s) 489
BclI TGATCA 1 cut(s) 294
BcnI CCSGG 1 cut(s) 128
BcoDI GTCTC 5 cut(s) 145, 189, 357, 400, 828
BfaI CTAG 3 cut(s) 464, 665, 1170
BfuAI ACCTGC 1 cut(s) 734
BfuI GTATCC 1 cut(s) 489
BisI GCNGC 5 cut(s) 61, 180, 220, 430, 1143
BlsI GCNGC 5 cut(s) 62, 181, 221, 431, 1144
Bme1390I CCNGG 4 cut(s) 128, 158, 561, 931
Bme18I GGWCC 2 cut(s) 19, 274
BmeT110I CYCGRG 1 cut(s) 164
BmgT120I GGNCC 3 cut(s) 19, 130, 274
BmiI GGNNCC 4 cut(s) 85, 132, 208, 276
BmrFI CCNGG 4 cut(s) 128, 158, 561, 931
BmsI GCATC 2 cut(s) 47, 1189
BpiI GAAGAC 1 cut(s) 606
BpmI CTGGAG 2 cut(s) 140, 424
BpuEI CTTGAG 1 cut(s) 218
BpuMI CCSGG 1 cut(s) 128
BsaBI GATNNNNATC 1 cut(s) 439
BsaHI GRCGYC 2 cut(s) 198, 255
BsaJI CCNNGG 7 cut(s) 55, 96, 147, 210, 560, 688, 930
BsaWI WCCGGW 1 cut(s) 880
Bsc4I CCNNNNNNNGG 2 cut(s) 668, 1027
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 2 cut(s) 890, 1083
Bse21I CCTNAGG 1 cut(s) 525
Bse8I GATNNNNATC 1 cut(s) 439
BseBI CCWGG 3 cut(s) 158, 561, 931
BseDI CCNNGG 7 cut(s) 55, 96, 147, 210, 560, 688, 930
BseGI GGATG 4 cut(s) 722, 1045, 1101, 1165
BseJI GATNNNNATC 1 cut(s) 439
BseLI CCNNNNNNNGG 2 cut(s) 668, 1027
BseMII CTCAG 3 cut(s) 516, 566, 1113
BseNI ACTGG 2 cut(s) 890, 1083
BseRI GAGGAG 8 cut(s) 40, 76, 79, 87, 104, 164, 296, 299
BseX3I CGGCCG 1 cut(s) 430
BseXI GCAGC 1 cut(s) 1129
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 4 cut(s) 219, 285, 389, 411
Bsh1285I CGRYCG 2 cut(s) 106, 433
BshFI GGCC 4 cut(s) 131, 432, 672, 1082
BshNI GGYRCC 1 cut(s) 206
BsiEI CGRYCG 2 cut(s) 106, 433
BsiHKAI GWGCWC 3 cut(s) 15, 156, 165
BsiHKCI CYCGRG 1 cut(s) 164
BsiSI CCGG 3 cut(s) 35, 128, 881
BslFI GGGAC 3 cut(s) 228, 260, 947
BslI CCNNNNNNNGG 2 cut(s) 668, 1027
BsmAI GTCTC 5 cut(s) 145, 189, 357, 400, 828
BsmBI CGTCTC 4 cut(s) 145, 189, 357, 400
BsmFI GGGAC 3 cut(s) 228, 260, 947
BsnI GGCC 4 cut(s) 131, 432, 672, 1082
BsoBI CYCGRG 1 cut(s) 164
Bsp1286I GDGCHC 3 cut(s) 15, 156, 165
Bsp143I GATC 3 cut(s) 294, 434, 477
Bsp19I CCATGG 1 cut(s) 210
BspANI GGCC 4 cut(s) 131, 432, 672, 1082
BspCNI CTCAG 3 cut(s) 517, 565, 1114
BspFNI CGCG 4 cut(s) 219, 285, 389, 411
BspHI TCATGA 1 cut(s) 297
BspLI GGNNCC 4 cut(s) 85, 132, 208, 276
BspMI ACCTGC 1 cut(s) 734
BspPI GGATC 2 cut(s) 429, 485
BspQI GCTCTTC 1 cut(s) 350
BspT107I GGYRCC 1 cut(s) 206
BsrBI CCGCTC 1 cut(s) 112
BsrFI RCCGGY 1 cut(s) 34
BsrI ACTGG 2 cut(s) 890, 1083
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 7 cut(s) 55, 96, 147, 210, 560, 688, 930
BssMI GATC 3 cut(s) 294, 434, 477
BssNI GRCGYC 2 cut(s) 198, 255
BssT1I CCWWGG 2 cut(s) 96, 210
Bst2UI CCWGG 3 cut(s) 158, 561, 931
Bst6I CTCTTC 3 cut(s) 317, 350, 355
BstACI GRCGYC 2 cut(s) 198, 255
BstC8I GCNNGC 3 cut(s) 110, 224, 341
BstDEI CTNAG 4 cut(s) 525, 552, 899, 1122
BstDSI CCRYGG 2 cut(s) 55, 210
BstEII GGTNACC 1 cut(s) 1005
BstF5I GGATG 4 cut(s) 722, 1045, 1101, 1165
BstFNI CGCG 4 cut(s) 219, 285, 389, 411
BstHHI GCGC 4 cut(s) 179, 391, 413, 1147
BstKTI GATC 3 cut(s) 297, 437, 480
BstMAI GTCTC 5 cut(s) 145, 189, 357, 400, 828
BstMBI GATC 3 cut(s) 294, 434, 477
BstMCI CGRYCG 2 cut(s) 106, 433
BstMWI GCNNNNNNNGC 7 cut(s) 66, 75, 160, 408, 460, 678, 869
BstNI CCWGG 3 cut(s) 158, 561, 931
BstNSI RCATGY 2 cut(s) 613, 959
BstPI GGTNACC 1 cut(s) 1005
BstSCI CCNGG 4 cut(s) 126, 156, 559, 929
BstUI CGCG 4 cut(s) 219, 285, 389, 411
BstV1I GCAGC 1 cut(s) 1129
BstV2I GAAGAC 1 cut(s) 606
BstZI CGGCCG 1 cut(s) 430
Bsu36I CCTNAGG 1 cut(s) 525
BsuI GTATCC 1 cut(s) 489
BsuRI GGCC 4 cut(s) 131, 432, 672, 1082
BtgI CCRYGG 2 cut(s) 55, 210
BtsCI GGATG 4 cut(s) 722, 1045, 1101, 1165
BtsIMutI CAGTG 2 cut(s) 897, 1090
BveI ACCTGC 1 cut(s) 734
Cac8I GCNNGC 3 cut(s) 110, 224, 341
CaiI CAGNNNCTG 1 cut(s) 506
CciI TCATGA 1 cut(s) 297
CfoI GCGC 4 cut(s) 179, 391, 413, 1147
Cfr10I RCCGGY 1 cut(s) 34
Cfr13I GGNCC 3 cut(s) 19, 130, 274
CseI GACGC 5 cut(s) 206, 225, 244, 310, 417
Csp6I GTAC 1 cut(s) 819
CviAII CATG 8 cut(s) 211, 298, 394, 451, 581, 610, 956, 1139
CviQI GTAC 1 cut(s) 819
DdeI CTNAG 4 cut(s) 525, 552, 899, 1122
DpnI GATC 3 cut(s) 296, 436, 479
DpnII GATC 3 cut(s) 294, 434, 477
DraI TTTAAA 1 cut(s) 982
EaeI YGGCCR 2 cut(s) 430, 1080
EagI CGGCCG 1 cut(s) 430
Eam1104I CTCTTC 3 cut(s) 317, 350, 355
EarI CTCTTC 3 cut(s) 317, 350, 355
EciI GGCGGA 5 cut(s) 78, 82, 84, 93, 133
Ecl136II GAGCTC 3 cut(s) 13, 154, 163
EclXI CGGCCG 1 cut(s) 430
Eco130I CCWWGG 2 cut(s) 96, 210
Eco24I GRGCYC 3 cut(s) 15, 156, 165
Eco32I GATATC 4 cut(s) 598, 905, 942, 1111
Eco47I GGWCC 2 cut(s) 19, 274
Eco52I CGGCCG 1 cut(s) 430
Eco53kI GAGCTC 3 cut(s) 13, 154, 163
Eco81I CCTNAGG 1 cut(s) 525
Eco88I CYCGRG 1 cut(s) 164
Eco91I GGTNACC 1 cut(s) 1005
EcoICRI GAGCTC 3 cut(s) 13, 154, 163
EcoO109I RGGNCCY 1 cut(s) 19
EcoO65I GGTNACC 1 cut(s) 1005
EcoRI GAATTC 1 cut(s) 25
EcoRII CCWGG 3 cut(s) 156, 559, 929
EcoRV GATATC 4 cut(s) 598, 905, 942, 1111
EcoT14I CCWWGG 2 cut(s) 96, 210
EcoT38I GRGCYC 3 cut(s) 15, 156, 165
ErhI CCWWGG 2 cut(s) 96, 210
Esp3I CGTCTC 4 cut(s) 145, 189, 357, 400
FaeI CATG 8 cut(s) 214, 301, 397, 454, 584, 613, 959, 1142
FaqI GGGAC 3 cut(s) 228, 260, 947
FatI CATG 8 cut(s) 210, 297, 393, 450, 580, 609, 955, 1138
FauI CCCGC 3 cut(s) 117, 702, 1122
FbaI TGATCA 1 cut(s) 294
Fnu4HI GCNGC 5 cut(s) 61, 180, 220, 430, 1143
FokI GGATG 4 cut(s) 709, 1052, 1108, 1152
FriOI GRGCYC 3 cut(s) 15, 156, 165
Fsp4HI GCNGC 5 cut(s) 61, 180, 220, 430, 1143
FspBI CTAG 3 cut(s) 464, 665, 1170
GlaI GCGC 4 cut(s) 178, 390, 412, 1146
GluI GCNGC 5 cut(s) 61, 180, 220, 430, 1143
GsuI CTGGAG 2 cut(s) 140, 424
HaeIII GGCC 4 cut(s) 131, 432, 672, 1082
HapII CCGG 3 cut(s) 35, 128, 881
HgaI GACGC 5 cut(s) 206, 225, 244, 310, 417
HhaI GCGC 4 cut(s) 179, 391, 413, 1147
Hin1I GRCGYC 2 cut(s) 198, 255
Hin1II CATG 8 cut(s) 214, 301, 397, 454, 584, 613, 959, 1142
Hin6I GCGC 4 cut(s) 177, 389, 411, 1145
HinP1I GCGC 4 cut(s) 177, 389, 411, 1145
HinfI GANTC 7 cut(s) 5, 358, 447, 713, 895, 935, 1099
HpaII CCGG 3 cut(s) 35, 128, 881
HphI GGTGA 1 cut(s) 304
Hpy188III TCNNGA 7 cut(s) 166, 277, 298, 362, 444, 767, 853
Hpy99I CGWCG 1 cut(s) 260
HpyAV CCTTC 2 cut(s) 809, 1032
HpyCH4IV ACGT 1 cut(s) 186
HpyCH4V TGCA 4 cut(s) 339, 743, 791, 1180
HpyF10VI GCNNNNNNNGC 7 cut(s) 66, 75, 160, 408, 460, 678, 869
HpyF3I CTNAG 4 cut(s) 525, 552, 899, 1122
HpySE526I ACGT 1 cut(s) 186
Hsp92I GRCGYC 2 cut(s) 198, 255
Hsp92II CATG 8 cut(s) 214, 301, 397, 454, 584, 613, 959, 1142
HspAI GCGC 4 cut(s) 177, 389, 411, 1145
Ksp22I TGATCA 1 cut(s) 294
Kzo9I GATC 3 cut(s) 294, 434, 477
LguI GCTCTTC 1 cut(s) 350
Lsp1109I GCAGC 1 cut(s) 1129
LweI GCATC 2 cut(s) 47, 1189
MaeI CTAG 3 cut(s) 464, 665, 1170
MaeII ACGT 1 cut(s) 186
MaeIII GTNAC 4 cut(s) 265, 751, 997, 1005
MalI GATC 3 cut(s) 296, 436, 479
MbiI CCGCTC 1 cut(s) 112
MboI GATC 3 cut(s) 294, 434, 477
MboII GAAGA 9 cut(s) 181, 304, 337, 342, 606, 609, 833, 959, 1043
MhlI GDGCHC 3 cut(s) 15, 156, 165
MlsI TGGCCA 1 cut(s) 1082
MluCI AATT 4 cut(s) 25, 798, 977, 1073
MluI ACGCGT 1 cut(s) 283
MluNI TGGCCA 1 cut(s) 1082
MlyI GAGTC 4 cut(s) 456, 722, 929, 1093
MmeI TCCRAC 2 cut(s) 750, 1086
Mox20I TGGCCA 1 cut(s) 1082
MscI TGGCCA 1 cut(s) 1082
MseI TTAA 2 cut(s) 981, 1149
MslI CAYNNNNRTG 1 cut(s) 1170
Msp20I TGGCCA 1 cut(s) 1082
MspA1I CMGCKG 1 cut(s) 709
MspI CCGG 3 cut(s) 35, 128, 881
MspR9I CCNGG 4 cut(s) 128, 158, 561, 931
MvaI CCWGG 3 cut(s) 158, 561, 931
MvnI CGCG 4 cut(s) 219, 285, 389, 411
MwoI GCNNNNNNNGC 7 cut(s) 66, 75, 160, 408, 460, 678, 869
NciI CCSGG 1 cut(s) 128
NcoI CCATGG 1 cut(s) 210
NdeII GATC 3 cut(s) 294, 434, 477
NlaIII CATG 8 cut(s) 214, 301, 397, 454, 584, 613, 959, 1142
NlaIV GGNNCC 4 cut(s) 85, 132, 208, 276
NmeAIII GCCGAG 2 cut(s) 172, 231
NmuCI GTSAC 3 cut(s) 265, 751, 997
NspI RCATGY 2 cut(s) 613, 959
PaeR7I CTCGAG 1 cut(s) 164
PagI TCATGA 1 cut(s) 297
PaqCI CACCTGC 1 cut(s) 734
PciI ACATGT 2 cut(s) 609, 955
PciSI GCTCTTC 1 cut(s) 350
PfeI GAWTC 3 cut(s) 5, 358, 895
PflFI GACNNNGTC 1 cut(s) 1102
PfoI TCCNGGA 1 cut(s) 156
PkrI GCNGC 5 cut(s) 62, 181, 221, 431, 1144
PleI GAGTC 4 cut(s) 455, 721, 929, 1093
PpsI GAGTC 4 cut(s) 455, 721, 929, 1093
PpuMI RGGWCCY 1 cut(s) 19
PscI ACATGT 2 cut(s) 609, 955
Psp124BI GAGCTC 3 cut(s) 15, 156, 165
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 3 cut(s) 156, 559, 929
PspEI GGTNACC 1 cut(s) 1005
PspGI CCWGG 3 cut(s) 156, 559, 929
PspN4I GGNNCC 4 cut(s) 85, 132, 208, 276
PspPI GGNCC 3 cut(s) 19, 130, 274
PspPPI RGGWCCY 1 cut(s) 19
PstNI CAGNNNCTG 1 cut(s) 506
PsyI GACNNNGTC 1 cut(s) 1102
RsaI GTAC 1 cut(s) 820
RsaNI GTAC 1 cut(s) 819
RseI CAYNNNNRTG 1 cut(s) 1170
SacI GAGCTC 3 cut(s) 15, 156, 165
SapI GCTCTTC 1 cut(s) 350
SaqAI TTAA 2 cut(s) 981, 1149
SatI GCNGC 5 cut(s) 61, 180, 220, 430, 1143
Sau3AI GATC 3 cut(s) 294, 434, 477
Sau96I GGNCC 3 cut(s) 19, 130, 274
SchI GAGTC 4 cut(s) 456, 722, 929, 1093
ScrFI CCNGG 4 cut(s) 128, 158, 561, 931
SduI GDGCHC 3 cut(s) 15, 156, 165
SfaNI GCATC 2 cut(s) 47, 1189
Sfr274I CTCGAG 1 cut(s) 164
SinI GGWCC 2 cut(s) 19, 274
SlaI CTCGAG 1 cut(s) 164
SmiMI CAYNNNNRTG 1 cut(s) 1170
SmlI CTYRAG 3 cut(s) 14, 164, 233
SmoI CTYRAG 3 cut(s) 14, 164, 233
Sse9I AATT 4 cut(s) 25, 798, 977, 1073
SspMI CTAG 3 cut(s) 464, 665, 1170
SstI GAGCTC 3 cut(s) 15, 156, 165
StyD4I CCNGG 4 cut(s) 126, 156, 559, 929
StyI CCWWGG 2 cut(s) 96, 210
TaiI ACGT 1 cut(s) 189
TaqI TCGA 4 cut(s) 165, 361, 766, 938
TasI AATT 4 cut(s) 25, 798, 977, 1073
TauI GCSGC 4 cut(s) 63, 182, 222, 432
TfiI GAWTC 3 cut(s) 5, 358, 895
Tru1I TTAA 2 cut(s) 981, 1149
Tru9I TTAA 2 cut(s) 981, 1149
TscAI CASTG 2 cut(s) 897, 1090
TseFI GTSAC 3 cut(s) 265, 751, 997
TseI GCWGC 1 cut(s) 1142
Tsp45I GTSAC 3 cut(s) 265, 751, 997
TspGWI ACGGA 1 cut(s) 127
TspRI CASTG 2 cut(s) 897, 1090
Tth111I GACNNNGTC 1 cut(s) 1102
VpaK11BI GGWCC 2 cut(s) 19, 274
XapI RAATTY 1 cut(s) 25
XceI RCATGY 2 cut(s) 613, 959
XcmI CCANNNNNNNNNTGG 1 cut(s) 646
XhoI CTCGAG 1 cut(s) 164
XspI CTAG 3 cut(s) 464, 665, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.