Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0005846

Physical Location & Seq

Genomic Coordinates Forward (+)

1729911 .. 1730774

Gene Structure 864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1028600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 537 bp

ATGCGACGCGATGTGTACGGCACCATGGGACGCGACGGATTGCCGGTGAAGGAGAAAGTGCTGCTAGGGCTCGCGCTGGTGACTCTGGTTCCGATACGGGTGGTTCTAACGACGACGGTGTTGGTGCTGACGACGACGGTGTTGGTGCTGTACTACTTGATTTGCCGGATTTGCACTCTCTTCAAAGTCCCCAATCACGATGAGCAGGAGCAGGAGGATTACGCGCACATGGGAGGATGGCGGCGGGCGGTGATTGTCCAGTGCGGCCGCGCCTTATCCAGAGTAATGCTCGTTGTCTTCGGCTTCTATTGGATCAGCGAAACCCATCGAATATCATCGGATTCTGACCCCAAACCCGCCGCCCAGGGAAAAGATGGGGCCGAAGAGAAGGAGCCTGAAAGGGCAGGGGCGATTATATCGAATCACGTTTCGTATTTGGATATCTTGTATCACATGTCTAATTCGTTTCCGAGCTTCGCTGCCAAGGTTTGCCACTCTCTTCACTTGTTCTTACTAATTTTATGGCACCGGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0006644 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0008654 GO:0009058 GO:0009987 GO:0012505 GO:0016740 GO:0016746 GO:0016747 GO:0019637 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0047184 GO:0050200 GO:0071617 GO:0071618 GO:0071704 GO:0090407 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 map00564 map00565 map01100

Pfam Domains

Protein Families

Acyltransferase

Protein Analysis

179

Amino Acids

20.17

Weight (kDa)

8.37

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005846)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80950 AT1G80950
fragaria_vesca	FvH4_2g40130 FvH4_2g40130 FvH4_2g40130
malus_domestica	MD08G1032300.v1.1 MD15G1028600.v1.1 MD15G1029000.v1.1
prunus_persica	Prupe.1G382400_v2.0.a1 Prupe.1G382400_v2.0.a1 Prupe.1G382400_v2.0.a1 Prupe.1G382400_v2.0.a1 Prupe.1G382400_v2.0.a1
pyrus_communis	pycom08g02560 pycom15g02570
rosa_chinensis	RchiOBHm_Chr6g0300601
rosa_laevigata	RLG00000011320
rosa_multiflora	Rmu_co8413177.1_g000001 Rmu_co8463661.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167600
rosa_rugosa	Rorug06G0297800 Rorug06G0297900 Rorug06G0298000
rosa_samantha	Rh6AG410400 Rh6BG417500 Rh6CG425100 Rh6DG410600
rosa_wichuraiana	Rw6G035890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	20, 525
AccII	CGCG	5 cut(s)	9, 33, 74, 224, 270
AciI	CCGC	7 cut(s)	241, 244, 248, 264, 268, 357, 360
AclWI	GGATC	1 cut(s)	320
AcoI	YGGCCR	1 cut(s)	265
AfaI	GTAC	2 cut(s)	17, 152
AflIII	ACRYGT	1 cut(s)	453
AgsI	TTSAA	1 cut(s)	184
AjnI	CCWGG	1 cut(s)	363
AluBI	AGCT	1 cut(s)	474
AluI	AGCT	1 cut(s)	474
AlwI	GGATC	1 cut(s)	320
AoxI	GGCC	2 cut(s)	265, 378
ApeKI	GCWGC	2 cut(s)	61, 479
AspLEI	GCGC	3 cut(s)	76, 226, 272
AspS9I	GGNCC	1 cut(s)	378
AsuHPI	GGTGA	3 cut(s)	58, 91, 262
BanI	GGYRCC	2 cut(s)	20, 525
BanII	GRGCYC	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	289
BbvI	GCAGC	2 cut(s)	48, 466
BccI	CCATC	3 cut(s)	231, 333, 368
BceAI	ACGGC	1 cut(s)	34
BciT130I	CCWGG	1 cut(s)	365
BfaI	CTAG	1 cut(s)	65
BisI	GCNGC	6 cut(s)	62, 242, 265, 268, 360, 480
BlsI	GCNGC	6 cut(s)	63, 243, 266, 269, 361, 481
Bme1390I	CCNGG	1 cut(s)	365
BmgT120I	GGNCC	1 cut(s)	378
BmiI	GGNNCC	5 cut(s)	22, 90, 379, 393, 527
BmrFI	CCNGG	1 cut(s)	365
BpiI	GAAGAC	1 cut(s)	289
BplI	GAGNNNNNCTC	2 cut(s)	273, 305
BsaJI	CCNNGG	4 cut(s)	24, 363, 364, 483
BsaWI	WCCGGW	1 cut(s)	528
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	1 cut(s)	259
BseBI	CCWGG	1 cut(s)	365
BseDI	CCNNGG	4 cut(s)	24, 363, 364, 483
BseGI	GGATG	2 cut(s)	242, 537
BseNI	ACTGG	1 cut(s)	259
BseX3I	CGGCCG	1 cut(s)	265
BseXI	GCAGC	2 cut(s)	48, 466
Bsh1236I	CGCG	5 cut(s)	9, 33, 74, 224, 270
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	2 cut(s)	267, 380
BshNI	GGYRCC	2 cut(s)	20, 525
BsiEI	CGRYCG	1 cut(s)	268
BsiSI	CCGG	3 cut(s)	44, 166, 529
BslFI	GGGAC	2 cut(s)	42, 173
BsmFI	GGGAC	2 cut(s)	42, 173
BsnI	GGCC	2 cut(s)	267, 380
Bsp1286I	GDGCHC	1 cut(s)	72
Bsp143I	GATC	1 cut(s)	312
Bsp19I	CCATGG	1 cut(s)	24
BspACI	CCGC	7 cut(s)	241, 244, 248, 264, 268, 357, 360
BspANI	GGCC	2 cut(s)	267, 380
BspFNI	CGCG	5 cut(s)	9, 33, 74, 224, 270
BspLI	GGNNCC	5 cut(s)	22, 90, 379, 393, 527
BspPI	GGATC	1 cut(s)	320
BspT107I	GGYRCC	2 cut(s)	20, 525
BsrFI	RCCGGY	1 cut(s)	43
BsrI	ACTGG	1 cut(s)	259
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	4 cut(s)	24, 363, 364, 483
BssMI	GATC	1 cut(s)	312
BssT1I	CCWWGG	2 cut(s)	24, 483
Bst2UI	CCWGG	1 cut(s)	365
Bst4CI	ACNGT	2 cut(s)	118, 139
Bst6I	CTCTTC	3 cut(s)	185, 378, 504
BstC8I	GCNNGC	2 cut(s)	72, 246
BstDSI	CCRYGG	1 cut(s)	24
BstF5I	GGATG	2 cut(s)	242, 537
BstFNI	CGCG	5 cut(s)	9, 33, 74, 224, 270
BstHHI	GCGC	3 cut(s)	76, 226, 272
BstKTI	GATC	1 cut(s)	315
BstMBI	GATC	1 cut(s)	312
BstMCI	CGRYCG	1 cut(s)	268
BstMWI	GCNNNNNNNGC	2 cut(s)	67, 171
BstNI	CCWGG	1 cut(s)	365
BstNSI	RCATGY	1 cut(s)	457
BstSCI	CCNGG	1 cut(s)	363
BstUI	CGCG	5 cut(s)	9, 33, 74, 224, 270
BstV1I	GCAGC	2 cut(s)	48, 466
BstV2I	GAAGAC	1 cut(s)	289
BstZI	CGGCCG	1 cut(s)	265
BsuRI	GGCC	2 cut(s)	267, 380
BtgI	CCRYGG	1 cut(s)	24
BtgZI	GCGATG	1 cut(s)	24
BtsCI	GGATG	2 cut(s)	242, 537
BtsIMutI	CAGTG	1 cut(s)	266
Cac8I	GCNNGC	2 cut(s)	72, 246
CciNI	GCGGCCGC	1 cut(s)	265
CfoI	GCGC	3 cut(s)	76, 226, 272
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	1 cut(s)	378
CseI	GACGC	2 cut(s)	15, 39
Csp6I	GTAC	2 cut(s)	16, 151
CviAII	CATG	3 cut(s)	25, 229, 454
CviJI	RGCY	6 cut(s)	70, 267, 303, 380, 394, 474
CviKI_1	RGCY	6 cut(s)	70, 267, 303, 380, 394, 474
CviQI	GTAC	2 cut(s)	16, 151
DpnI	GATC	1 cut(s)	314
DpnII	GATC	1 cut(s)	312
EaeI	YGGCCR	1 cut(s)	265
EagI	CGGCCG	1 cut(s)	265
Eam1104I	CTCTTC	3 cut(s)	185, 378, 504
EarI	CTCTTC	3 cut(s)	185, 378, 504
EclXI	CGGCCG	1 cut(s)	265
Eco130I	CCWWGG	2 cut(s)	24, 483
Eco24I	GRGCYC	1 cut(s)	72
Eco32I	GATATC	1 cut(s)	442
Eco52I	CGGCCG	1 cut(s)	265
EcoRII	CCWGG	1 cut(s)	363
EcoRV	GATATC	1 cut(s)	442
EcoT14I	CCWWGG	2 cut(s)	24, 483
EcoT38I	GRGCYC	1 cut(s)	72
ErhI	CCWWGG	2 cut(s)	24, 483
FaeI	CATG	3 cut(s)	28, 232, 457
FaiI	YATR	5 cut(s)	26, 230, 416, 455, 523
FaqI	GGGAC	2 cut(s)	42, 173
FatI	CATG	3 cut(s)	24, 228, 453
FauI	CCCGC	2 cut(s)	237, 364
Fnu4HI	GCNGC	6 cut(s)	62, 242, 265, 268, 360, 480
FokI	GGATG	1 cut(s)	249
FriOI	GRGCYC	1 cut(s)	72
Fsp4HI	GCNGC	6 cut(s)	62, 242, 265, 268, 360, 480
FspBI	CTAG	1 cut(s)	65
GlaI	GCGC	3 cut(s)	75, 225, 271
GluI	GCNGC	6 cut(s)	62, 242, 265, 268, 360, 480
HaeIII	GGCC	2 cut(s)	267, 380
HapII	CCGG	3 cut(s)	44, 166, 529
HgaI	GACGC	2 cut(s)	15, 39
HhaI	GCGC	3 cut(s)	76, 226, 272
Hin1II	CATG	3 cut(s)	28, 232, 457
Hin6I	GCGC	3 cut(s)	74, 224, 270
HinP1I	GCGC	3 cut(s)	74, 224, 270
HinfI	GANTC	3 cut(s)	82, 341, 421
HpaII	CCGG	3 cut(s)	44, 166, 529
HphI	GGTGA	3 cut(s)	58, 91, 262
Hpy166II	GTNNAC	1 cut(s)	16
Hpy188I	TCNGA	4 cut(s)	93, 340, 346, 471
Hpy188III	TCNNGA	2 cut(s)	197, 279
Hpy8I	GTNNAC	1 cut(s)	16
Hpy99I	CGWCG	6 cut(s)	9, 38, 115, 118, 136, 139
HpyAV	CCTTC	2 cut(s)	43, 382
HpyCH4III	ACNGT	2 cut(s)	118, 139
HpyCH4IV	ACGT	1 cut(s)	426
HpyCH4V	TGCA	1 cut(s)	174
HpyF10VI	GCNNNNNNNGC	2 cut(s)	67, 171
HpySE526I	ACGT	1 cut(s)	426
Hsp92II	CATG	3 cut(s)	28, 232, 457
HspAI	GCGC	3 cut(s)	74, 224, 270
Kzo9I	GATC	1 cut(s)	312
LmnI	GCTCC	2 cut(s)	208, 391
Lsp1109I	GCAGC	2 cut(s)	48, 466
MaeI	CTAG	1 cut(s)	65
MaeII	ACGT	1 cut(s)	426
MaeIII	GTNAC	1 cut(s)	79
MalI	GATC	1 cut(s)	314
MboI	GATC	1 cut(s)	312
MboII	GAAGA	4 cut(s)	172, 289, 395, 491
MhlI	GDGCHC	1 cut(s)	72
MluCI	AATT	2 cut(s)	460, 516
MlyI	GAGTC	1 cut(s)	76
MnlI	CCTC	2 cut(s)	208, 227
MspI	CCGG	3 cut(s)	44, 166, 529
MspR9I	CCNGG	1 cut(s)	365
MvaI	CCWGG	1 cut(s)	365
MvnI	CGCG	5 cut(s)	9, 33, 74, 224, 270
MwoI	GCNNNNNNNGC	2 cut(s)	67, 171
NcoI	CCATGG	1 cut(s)	24
NdeII	GATC	1 cut(s)	312
NlaIII	CATG	3 cut(s)	28, 232, 457
NlaIV	GGNNCC	5 cut(s)	22, 90, 379, 393, 527
NmuCI	GTSAC	1 cut(s)	79
NotI	GCGGCCGC	1 cut(s)	265
NspI	RCATGY	1 cut(s)	457
PasI	CCCWGGG	1 cut(s)	364
PciI	ACATGT	1 cut(s)	453
PfeI	GAWTC	2 cut(s)	341, 421
PkrI	GCNGC	6 cut(s)	63, 243, 266, 269, 361, 481
PleI	GAGTC	1 cut(s)	76
PpsI	GAGTC	1 cut(s)	76
PscI	ACATGT	1 cut(s)	453
Psp6I	CCWGG	1 cut(s)	363
PspGI	CCWGG	1 cut(s)	363
PspN4I	GGNNCC	5 cut(s)	22, 90, 379, 393, 527
PspPI	GGNCC	1 cut(s)	378
RsaI	GTAC	2 cut(s)	17, 152
RsaNI	GTAC	2 cut(s)	16, 151
SatI	GCNGC	6 cut(s)	62, 242, 265, 268, 360, 480
Sau3AI	GATC	1 cut(s)	312
Sau96I	GGNCC	1 cut(s)	378
SchI	GAGTC	1 cut(s)	76
ScrFI	CCNGG	1 cut(s)	365
SduI	GDGCHC	1 cut(s)	72
SetI	ASST	3 cut(s)	429, 476, 489
Sse9I	AATT	2 cut(s)	460, 516
SsiI	CCGC	7 cut(s)	241, 244, 248, 264, 268, 357, 360
SspMI	CTAG	1 cut(s)	65
StyD4I	CCNGG	1 cut(s)	363
StyI	CCWWGG	2 cut(s)	24, 483
TaaI	ACNGT	2 cut(s)	118, 139
TaiI	ACGT	1 cut(s)	429
TaqI	TCGA	2 cut(s)	328, 419
TasI	AATT	2 cut(s)	460, 516
TatI	WGTACW	1 cut(s)	150
TauI	GCSGC	4 cut(s)	244, 267, 270, 362
TfiI	GAWTC	2 cut(s)	341, 421
TscAI	CASTG	1 cut(s)	266
TseFI	GTSAC	1 cut(s)	79
TseI	GCWGC	2 cut(s)	61, 479
Tsp45I	GTSAC	1 cut(s)	79
TspGWI	ACGGA	1 cut(s)	51
TspRI	CASTG	1 cut(s)	266
XceI	RCATGY	1 cut(s)	457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	371
XspI	CTAG	1 cut(s)	65

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.